Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:18:32 (3000492): wrapper (7.7.26015): starting
05:18:32 (3000492): wrapper: running run_atlas (--nthreads 12)
[2026-04-03 05:18:32] Arguments: --nthreads 12
[2026-04-03 05:18:32] Threads: 12
[2026-04-03 05:18:32] Checking for CVMFS
[2026-04-03 05:18:32] No cvmfs_config command found, will try listing directly
[2026-04-03 05:18:32] CVMFS is ok
[2026-04-03 05:18:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 05:18:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 05:18:32] Further information can be found at the LHC@home message board.
[2026-04-03 05:18:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 05:18:32] Checking for apptainer binary...
[2026-04-03 05:18:32] which: no apptainer in ((null))
[2026-04-03 05:18:32] apptainer is not installed, using version from CVMFS
[2026-04-03 05:18:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 05:18:32] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-03 05:18:32] apptainer works
[2026-04-03 05:18:32] Set ATHENA_PROC_NUMBER=12
[2026-04-03 05:18:32] Set ATHENA_CORE_NUMBER=12
[2026-04-03 05:18:32] Starting ATLAS job with PandaID=7065656990
[2026-04-03 05:18:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 05:37:05]  *** The last 200 lines of the pilot log: ***
[2026-04-03 05:37:05]  is_tar=False
[2026-04-03 05:37:05]  lfn=log.48955010._054083.job.log.tgz.1
[2026-04-03 05:37:05]  mtime=0
[2026-04-03 05:37:05]  protocol_id=None
[2026-04-03 05:37:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-03 05:37:05]  replicas=None
[2026-04-03 05:37:05]  scope=mc23_13p6TeV
[2026-04-03 05:37:05]  status=None
[2026-04-03 05:37:05]  status_code=0
[2026-04-03 05:37:05]  storage_token=
[2026-04-03 05:37:05]  surl=/var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7065656990/log.48955010._054083.job.log.tgz.1
[2026-04-03 05:37:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/ab/log.48955010._054083.job.log.tgz.1
[2026-04-03 05:37:05]  workdir=None
[2026-04-03 05:37:05] ]
[2026-04-03 05:37:05] 2026-04-03 03:36:30,335 | INFO     | transferring file log.48955010._054083.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7065656990/log.48955010._054083.job.log.tgz.1 to /var/lib/b
[2026-04-03 05:37:05] 2026-04-03 03:36:30,335 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7065656990/log.48955010._054083.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/6/lo
[2026-04-03 05:37:05] 2026-04-03 03:36:30,344 | INFO     | adding to output.list: log.48955010._054083.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/ab/log.48955010._054083.job.log.tg
[2026-04-03 05:37:05] 2026-04-03 03:36:30,344 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-03 05:37:05] 2026-04-03 03:36:30,344 | INFO     | summary of transferred files:
[2026-04-03 05:37:05] 2026-04-03 03:36:30,344 | INFO     |  -- lfn=log.48955010._054083.job.log.tgz.1, status_code=0, status=transferred
[2026-04-03 05:37:05] 2026-04-03 03:36:30,344 | INFO     | stage-out finished correctly
[2026-04-03 05:37:05] 2026-04-03 03:36:30,366 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-03 05:37:05] 2026-04-03 03:36:30,877 | INFO     | time since job start (1070s) is within the limit (345600.0s)
[2026-04-03 05:37:05] 2026-04-03 03:36:31,837 | WARNING  | process 3011300 can no longer be monitored (due to stat problems) - aborting
[2026-04-03 05:37:05] 2026-04-03 03:36:31,837 | INFO     | using path: /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7065656990/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,064 | INFO     | job 7065656990 has state=finished
[2026-04-03 05:37:05] 2026-04-03 03:36:32,064 | INFO     | preparing for final server update for job 7065656990 in state='finished'
[2026-04-03 05:37:05] 2026-04-03 03:36:32,064 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7065656990/jobReport.json
[2026-04-03 05:37:05] 2026-04-03 03:36:32,066 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/6/workernode_map.json
[2026-04-03 05:37:05] 2026-04-03 03:36:32,066 | INFO     | this job has now completed (state=finished)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,066 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,066 | INFO     | log transfer has been attempted: DONE
[2026-04-03 05:37:05] 2026-04-03 03:36:32,066 | INFO     | job 7065656990 has finished - writing final server update
[2026-04-03 05:37:05] 2026-04-03 03:36:32,066 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2891052/.job.ad'
[2026-04-03 05:37:05] 2026-04-03 03:36:32,066 | INFO     | total number of processed events: 400 (read)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,088 | INFO     | using path: /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7065656990/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,088 | INFO     | extracted standard info from prmon json
[2026-04-03 05:37:05] 2026-04-03 03:36:32,088 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 05:37:05] 2026-04-03 03:36:32,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 05:37:05] 2026-04-03 03:36:32,088 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 05:37:05] 2026-04-03 03:36:32,088 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 05:37:05] 2026-04-03 03:36:32,089 | INFO     | fitting pss+swap vs Time
[2026-04-03 05:37:05] 2026-04-03 03:36:32,089 | INFO     | sum of square deviations: 409310.0
[2026-04-03 05:37:05] 2026-04-03 03:36:32,089 | INFO     | sum of deviations: 15387005.999999998
[2026-04-03 05:37:05] 2026-04-03 03:36:32,089 | INFO     | mean x: 1775186948.0
[2026-04-03 05:37:05] 2026-04-03 03:36:32,089 | INFO     | mean y: 3108492.272727273
[2026-04-03 05:37:05] 2026-04-03 03:36:32,089 | INFO     | intersect: -66730692831.90133
[2026-04-03 05:37:05] 2026-04-03 03:36:32,089 | INFO     | chi2: 2.402840772631793e-06
[2026-04-03 05:37:05] 2026-04-03 03:36:32,089 | INFO     | current memory leak: 37.59 B/s (using 11 data points, chi2=0.00)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | could have reported an average CPU frequency of 3678 MHz (4 samples)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | ..............................
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | . Timing measurements:
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | . get job = 0 s
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | . initial setup = 3 s
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | . payload setup = 4 s
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | . stage-in = 0 s
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | . payload execution = 1050 s
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | . stage-out = 0 s
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | . log creation = 0 s
[2026-04-03 05:37:05] 2026-04-03 03:36:32,090 | INFO     | ..............................
[2026-04-03 05:37:05] 2026-04-03 03:36:32,116 | INFO     | 
[2026-04-03 05:37:05] 2026-04-03 03:36:32,116 | INFO     | job summary report
[2026-04-03 05:37:05] 2026-04-03 03:36:32,116 | INFO     | --------------------------------------------------
[2026-04-03 05:37:05] 2026-04-03 03:36:32,116 | INFO     | PanDA job id: 7065656990
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | task id: 48955010
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | errors: (none)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | pilot state: finished 
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | transexitcode: 0
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | exeerrorcode: 0
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | exeerrordiag: 
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | exitcode: 0
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | exitmsg: OK
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | cpuconsumptiontime: 11059 s
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | nevents: 400
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | neventsw: 0
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | pid: 3011300
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | pgrp: 3011300
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | corecount: 12
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | event service: False
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | sizes: {0: 2280184, 11: 2280184, 1057: 2304769, 1059: 2313845, 1061: 2313983}
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | --------------------------------------------------
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | 
[2026-04-03 05:37:05] 2026-04-03 03:36:32,117 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/6
[2026-04-03 05:37:05] 2026-04-03 03:36:32,134 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | job 7065656990 has completed (purged errors)
[2026-04-03 05:37:05] 2026-04-03 03:36:32,135 | INFO     | overall cleanup function is called
[2026-04-03 05:37:05] 2026-04-03 03:36:32,664 | INFO     | number of running child processes to parent process 3011300: 1
[2026-04-03 05:37:05] 2026-04-03 03:36:32,665 | INFO     | maximum number of monitored processes: 6
[2026-04-03 05:37:05] 2026-04-03 03:36:32,665 | INFO     | aborting job monitoring since job object (job id=7065656990) has expired
[2026-04-03 05:37:05] 2026-04-03 03:36:32,782 | INFO     | PID=3005020 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-03 05:37:05] 2026-04-03 03:36:32,782 | INFO     | .. there are 2 such processes running
[2026-04-03 05:37:05] 2026-04-03 03:36:33,145 | INFO     | --- collectZombieJob: --- 10, [3011300]
[2026-04-03 05:37:05] 2026-04-03 03:36:33,145 | INFO     | zombie collector waiting for pid 3011300
[2026-04-03 05:37:05] 2026-04-03 03:36:33,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 05:37:05] 2026-04-03 03:36:33,145 | INFO     | collected zombie processes
[2026-04-03 05:37:05] 2026-04-03 03:36:33,145 | INFO     | will attempt to kill all subprocesses of pid=3011300
[2026-04-03 05:37:05] 2026-04-03 03:36:33,335 | INFO     | process IDs to be killed: [3011300] (in reverse order)
[2026-04-03 05:37:05] 2026-04-03 03:36:33,434 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 05:37:05] 2026-04-03 03:36:33,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 05:37:05] 2026-04-03 03:36:33,454 | INFO     | did not find any defunct processes belonging to 3011300
[2026-04-03 05:37:05] 2026-04-03 03:36:33,466 | INFO     | did not find any defunct processes belonging to 3011300
[2026-04-03 05:37:05] 2026-04-03 03:36:33,466 | INFO     | ready for new job
[2026-04-03 05:37:05] 2026-04-03 03:36:33,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 05:37:05] 2026-04-03 03:36:33,467 | INFO     | **************************************
[2026-04-03 05:37:05] 2026-04-03 03:36:33,467 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 05:37:05] 2026-04-03 03:36:33,467 | INFO     | **************************************
[2026-04-03 05:37:05] 2026-04-03 03:36:33,467 | INFO     | 
[2026-04-03 05:37:05] 2026-04-03 03:36:33,471 | INFO     | architecture information:
[2026-04-03 05:37:05] 2026-04-03 03:36:33,471 | INFO     | executing command: cat /etc/os-release
[2026-04-03 05:37:05] 2026-04-03 03:36:33,478 | INFO     | cat /etc/os-release:
[2026-04-03 05:37:05] NAME="CentOS Linux"
[2026-04-03 05:37:05] VERSION="7 (Core)"
[2026-04-03 05:37:05] ID="centos"
[2026-04-03 05:37:05] ID_LIKE="rhel fedora"
[2026-04-03 05:37:05] VERSION_ID="7"
[2026-04-03 05:37:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 05:37:05] ANSI_COLOR="0;31"
[2026-04-03 05:37:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 05:37:05] HOME_URL="https://www.centos.org/"
[2026-04-03 05:37:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 05:37:05] 
[2026-04-03 05:37:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 05:37:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 05:37:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 05:37:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 05:37:05] 
[2026-04-03 05:37:05] 2026-04-03 03:36:33,478 | INFO     | **************************************
[2026-04-03 05:37:05] 2026-04-03 03:36:33,981 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/6
[2026-04-03 05:37:05] 2026-04-03 03:36:33,989 | INFO     | sufficient remaining disk space (316373204992 B)
[2026-04-03 05:37:05] 2026-04-03 03:36:33,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 05:37:05] 2026-04-03 03:36:33,989 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 05:37:05] 2026-04-03 03:36:33,989 | INFO     | update_server=False
[2026-04-03 05:37:05] 2026-04-03 03:36:33,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 05:37:05] 2026-04-03 03:36:33,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 05:37:05] 2026-04-03 03:36:33,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 05:37:05] 2026-04-03 03:36:33,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 05:37:05] 2026-04-03 03:36:33,990 | INFO     | aborting loop
[2026-04-03 05:37:05] 2026-04-03 03:36:34,635 | INFO     | all data control threads have been joined
[2026-04-03 05:37:05] 2026-04-03 03:36:34,994 | INFO     | [job] retrieve thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:34,996 | INFO     | [job] queue monitor thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:34,996 | INFO     | [job] job monitor thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:35,004 | INFO     | [payload] failed_post thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:35,201 | INFO     | all payload control threads have been joined
[2026-04-03 05:37:05] 2026-04-03 03:36:35,327 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:35,439 | INFO     | all job control threads have been joined
[2026-04-03 05:37:05] 2026-04-03 03:36:35,620 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:35,641 | INFO     | [data] control thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:35,893 | INFO     | [job] validate thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:35,918 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:35,995 | INFO     | [data] copytool_out thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:36,025 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:36,037 | INFO     | [payload] validate_post thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:36,132 | INFO     | [data] copytool_in thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:36,207 | INFO     | [payload] control thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:36,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 05:37:05] 2026-04-03 03:36:36,444 | INFO     | [job] control thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:40,417 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 05:37:05] 2026-04-03 03:36:41,300 | INFO     | [monitor] cgroup control has ended
[2026-04-03 05:37:05] 2026-04-03 03:36:42,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23063555569472)>', '<ExcThread(monitor, started 23063312996096)>']
[2026-04-03 05:37:05] 2026-04-03 03:36:47,571 | INFO     | all workflow threads have been joined
[2026-04-03 05:37:05] 2026-04-03 03:36:47,571 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 05:37:05] 2026-04-03 03:36:47,571 | INFO     | traces error code: 0
[2026-04-03 05:37:05] 2026-04-03 03:36:47,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 05:37:05] 2026-04-03 03:37:05,119 | INFO     | PID=3005020 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-03 05:37:05] 2026-04-03 03:37:05,119 | INFO     | .. there are 2 such processes running
[2026-04-03 05:37:05] 2026-04-03 03:37:05,120 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 05:37:05] 2026-04-03 03:37:05,120 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 05:37:05] 2026-04-03 03:37:05,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 05:37:05] 2026-04-03 03:37:05,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 05:37:05] 2026-04-03 03:37:05,120 | INFO     | [monitor] control thread has ended
[2026-04-03 05:37:05] 2026-04-03 03:37:05,189 [wrapper] ==== pilot stdout END ====
[2026-04-03 05:37:05] 2026-04-03 03:37:05,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 05:37:05] 2026-04-03 03:37:05,194 [wrapper] pilotpid: 3005020
[2026-04-03 05:37:05] 2026-04-03 03:37:05,195 [wrapper] Pilot exit status: 0
[2026-04-03 05:37:05] 2026-04-03 03:37:05,203 [wrapper] pandaids: 7065656990
[2026-04-03 05:37:05] 2026-04-03 03:37:05,270 [wrapper] cleanup supervisor_pilot 3031427 3005021
[2026-04-03 05:37:05] 2026-04-03 03:37:05,271 [wrapper] Test setup, not cleaning
[2026-04-03 05:37:05] 2026-04-03 03:37:05,272 [wrapper] apfmon messages muted
[2026-04-03 05:37:05] 2026-04-03 03:37:05,273 [wrapper] ==== wrapper stdout END ====
[2026-04-03 05:37:05] 2026-04-03 03:37:05,274 [wrapper] ==== wrapper stderr END ====
[2026-04-03 05:37:05]  *** Error codes and diagnostics ***
[2026-04-03 05:37:05]     "exeErrorCode": 0,
[2026-04-03 05:37:05]     "exeErrorDiag": "",
[2026-04-03 05:37:05]     "pilotErrorCode": 0,
[2026-04-03 05:37:05]     "pilotErrorDiag": "",
[2026-04-03 05:37:05]  *** Listing of results directory ***
[2026-04-03 05:37:05] total 614232
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc    585013 Mar 28 18:13 pilot3.tar.gz
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc      5118 Mar 28 18:14 queuedata.json
[2026-04-03 05:37:05] -rwx------. 1 boinc boinc     36322 Mar 28 18:14 runpilot2-wrapper.sh
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc       100 Apr  3 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 05:37:05] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 05:18 run_atlas
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc       105 Apr  3 05:18 job.xml
[2026-04-03 05:37:05] -rw-r--r--. 2 boinc boinc     15845 Apr  3 05:18 start_atlas.sh
[2026-04-03 05:37:05] drwxrwx--x. 2 boinc boinc      4096 Apr  3 05:18 shared
[2026-04-03 05:37:05] -rw-r--r--. 2 boinc boinc    597527 Apr  3 05:18 input.tar.gz
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc      6707 Apr  3 05:18 init_data.xml
[2026-04-03 05:37:05] -rw-r--r--. 2 boinc boinc 440900628 Apr  3 05:18 EVNT.46701403._001785.pool.root.1
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc         0 Apr  3 05:18 boinc_lockfile
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc      2560 Apr  3 05:18 pandaJob.out
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc   1005183 Apr  3 05:18 agis_schedconf.cvmfs.json
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc   1511579 Apr  3 05:18 agis_ddmendpoints.agis.ALL.json
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc       441 Apr  3 05:18 workernode_map.json
[2026-04-03 05:37:05] drwx------. 5 boinc boinc      4096 Apr  3 05:18 pilot3
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc       530 Apr  3 05:36 boinc_task_state.xml
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc 183103977 Apr  3 05:36 HITS.48955010._054083.pool.root.1
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc      1022 Apr  3 05:36 memory_monitor_summary.json
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc    315915 Apr  3 05:36 log.48955010._054083.job.log.tgz.1
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc      6344 Apr  3 05:36 heartbeat.json
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc      8192 Apr  3 05:36 boinc_mmap_file
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc        27 Apr  3 05:36 wrapper_checkpoint.txt
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc        95 Apr  3 05:37 pilot_heartbeat.json
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc       822 Apr  3 05:37 pilotlog.txt
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc    203588 Apr  3 05:37 log.48955010._054083.job.log.1
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc       357 Apr  3 05:37 output.list
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc       620 Apr  3 05:37 runtime_log
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc    532480 Apr  3 05:37 result.tar.gz
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc      9206 Apr  3 05:37 runtime_log.err
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc       658 Apr  3 05:37 C5uKDmcQmQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDm0sKKDmy8uQOo.diag
[2026-04-03 05:37:05] -rw-r--r--. 1 boinc boinc     21550 Apr  3 05:37 stderr.txt
[2026-04-03 05:37:05] HITS file was successfully produced:
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc 183103977 Apr  3 05:36 shared/HITS.pool.root.1
[2026-04-03 05:37:05]  *** Contents of shared directory: ***
[2026-04-03 05:37:05] total 610512
[2026-04-03 05:37:05] -rw-r--r--. 2 boinc boinc     15845 Apr  3 05:18 start_atlas.sh
[2026-04-03 05:37:05] -rw-r--r--. 2 boinc boinc    597527 Apr  3 05:18 input.tar.gz
[2026-04-03 05:37:05] -rw-r--r--. 2 boinc boinc 440900628 Apr  3 05:18 ATLAS.root_0
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc 183103977 Apr  3 05:36 HITS.pool.root.1
[2026-04-03 05:37:05] -rw-------. 1 boinc boinc    532480 Apr  3 05:37 result.tar.gz
05:37:06 (3000492): run_atlas exited; CPU time 11071.935346
05:37:06 (3000492): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN