Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:42:59 (19284): wrapper (7.7.26015): starting
21:42:59 (19284): wrapper: running run_atlas (--nthreads 8)
[2026-03-28 21:42:59] Arguments: --nthreads 8
[2026-03-28 21:42:59] Threads: 8
[2026-03-28 21:42:59] Checking for CVMFS
[2026-03-28 21:42:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 21:42:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 21:42:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 21:42:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 21:42:59] 2.11.0.0 5945 27978 79856 157816 3 188 2526487 4096001 6419 130560 0 9972522 99.844 2323936 283 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-28 21:42:59] CVMFS is ok
[2026-03-28 21:42:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-28 21:42:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-28 21:42:59] Further information can be found at the LHC@home message board.
[2026-03-28 21:42:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 21:42:59] Checking for apptainer binary...
[2026-03-28 21:42:59] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-28 21:42:59] apptainer is not installed, using version from CVMFS
[2026-03-28 21:42:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 21:42:59] WARNING: Environment variable TMPDIR already has value [/tmp/job_11422209/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node006
[2026-03-28 21:42:59] apptainer works
[2026-03-28 21:42:59] Set ATHENA_PROC_NUMBER=8
[2026-03-28 21:42:59] Set ATHENA_CORE_NUMBER=8
[2026-03-28 21:42:59] Starting ATLAS job with PandaID=7071169275
[2026-03-28 21:42:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11422209/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-28 21:46:11]  *** The last 200 lines of the pilot log: ***
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | could have reported an average CPU frequency of 3194 MHz (4 samples)
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | ..............................
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . Timing measurements:
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . get job = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . initial setup = 2 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . payload setup = 10 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . stage-in = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | . payload execution = 2 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | . stage-out = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | . log creation = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | ..............................
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | executing command: tail -n 20 /tmp/job_11422209/atlas/pilot/slots/0/PanDA_Pilot-7071169275/pilotlog.txt
[2026-03-28 21:46:11] 2026-03-28 20:45:32,646 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-28 21:46:11] - Log from pilotlog.txt -
[2026-03-28 21:46:11] 2026-03-28 20:45:32,637 | INFO     | using path: /tmp/job_11422209/atlas/pilot/slots/0/PanDA_Pilot-7071169275/memory_monitor_summary.json (trf name=prmon)
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | extracted standard info from prmon json
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | extracted standard memory fields from prmon json
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | WARNING  | found no stored workdir sizes
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | will not add max space = 0 B to job metrics
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | WARNING  | wrong length of table data, x=[1774730609.0], y=[0.0] (must be same and length>=4)
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | could have reported an average CPU frequency of 3194 MHz (4 samples)
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | ..............................
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . Timing measurements:
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . get job = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . initial setup = 2 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . payload setup = 10 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . stage-in = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | . payload execution = 2 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | . stage-out = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | . log creation = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | ..............................
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | executing command: tail -n 20 /tmp/job_11422209/atlas/pilot/slots/0/PanDA_Pilot-7071169275/pilotlog.txt
[2026-03-28 21:46:11] 2026-03-28 20:45:32,646 | WARNING  | 
[2026-03-28 21:46:11] [begin log extracts]
[2026-03-28 21:46:11] - Log from pilotlog.txt -
[2026-03-28 21:46:11] 2026-03-28 20:45:32,637 | INFO     | using path: /tmp/job_11422209/atlas/pilot/slots/0/PanDA_Pilot-7071169275/memory_monitor_summary.json (trf name=prmon)
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | extracted standard info from prmon json
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | extracted standard memory fields from prmon json
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | WARNING  | found no stored workdir sizes
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | will not add max space = 0 B to job metrics
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | WARNING  | wrong length of table data, x=[1774730609.0], y=[0.0] (must be same and length>=4)
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | could have reported an average CPU frequency of 3194 MHz (4 samples)
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | ..............................
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . Timing measurements:
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . get job = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . initial setup = 2 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . payload setup = 10 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,638 | INFO     | . stage-in = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | . payload execution = 2 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | . stage-out = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | . log creation = 0 s
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | ..............................
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-28 21:46:11] 2026-03-28 20:45:32,639 | INFO     | executing command: tail -n 20 /tmp/job_11422209/atlas/pilot/slots/0/PanDA_Pilot-7071169275/pilotlog.txt
[2026-03-28 21:46:11] [end log extracts]
[2026-03-28 21:46:11] 2026-03-28 20:45:32,646 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2026-03-28 21:46:11] 2026-03-28 20:45:32,646 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Sim_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2026-03-28 21:46:11] 2026-03-28 20:45:33,063 | INFO     | 
[2026-03-28 21:46:11] 2026-03-28 20:45:33,063 | INFO     | job summary report
[2026-03-28 21:46:11] 2026-03-28 20:45:33,063 | INFO     | --------------------------------------------------
[2026-03-28 21:46:11] 2026-03-28 20:45:33,063 | INFO     | PanDA job id: 7071169275
[2026-03-28 21:46:11] 2026-03-28 20:45:33,063 | INFO     | task id: 48080911
[2026-03-28 21:46:11] 2026-03-28 20:45:33,063 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Sim_tf.py: command not found
[2026-03-28 21:46:11] 
[2026-03-28 21:46:11] 2026-03-28 20:45:33,063 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2026-03-28 21:46:11] 2026-03-28 20:45:33,063 | INFO     | pilot error code: 1187
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | pilot error diag: metadata does not exist: /tmp/job_11422209/atlas/pilot/slots/0/PanDA_Pilot-7071169275/metadata.xml
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | pilot state: failed 
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | transexitcode: 127
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | exeerrorcode: 0
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | exeerrordiag: 
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | exitcode: 0
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | exitmsg: 
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | cpuconsumptiontime: 4 s
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | nevents: 0
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | neventsw: 0
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | pid: 26794
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | pgrp: 26794
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | corecount: 8
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | event service: False
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | sizes: {0: 2279940, 1: 2280230, 11: 2280230, 16: 2288982, 18: 2288982, 136: 2288978}
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | --------------------------------------------------
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | 
[2026-03-28 21:46:11] 2026-03-28 20:45:33,064 | INFO     | executing command: ls -lF /tmp/job_11422209/atlas/pilot/slots/0
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-28 21:46:11] 2026-03-28 20:45:33,074 | INFO     | job 7071169275 has completed (purged errors)
[2026-03-28 21:46:11] 2026-03-28 20:45:33,075 | INFO     | overall cleanup function is called
[2026-03-28 21:46:11] 2026-03-28 20:45:34,080 | INFO     | --- collectZombieJob: --- 10, [26794]
[2026-03-28 21:46:11] 2026-03-28 20:45:34,080 | INFO     | zombie collector waiting for pid 26794
[2026-03-28 21:46:11] 2026-03-28 20:45:34,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-28 21:46:11] 2026-03-28 20:45:34,080 | INFO     | collected zombie processes
[2026-03-28 21:46:11] 2026-03-28 20:45:34,080 | INFO     | will attempt to kill all subprocesses of pid=26794
[2026-03-28 21:46:11] 2026-03-28 20:45:34,198 | INFO     | process IDs to be killed: [26794] (in reverse order)
[2026-03-28 21:46:11] 2026-03-28 20:45:34,242 | WARNING  | found no corresponding commands to process id(s)
[2026-03-28 21:46:11] 2026-03-28 20:45:34,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-28 21:46:11] 2026-03-28 20:45:34,246 | INFO     | did not find any defunct processes belonging to 26794
[2026-03-28 21:46:11] 2026-03-28 20:45:34,250 | INFO     | did not find any defunct processes belonging to 26794
[2026-03-28 21:46:11] 2026-03-28 20:45:34,250 | INFO     | ready for new job
[2026-03-28 21:46:11] 2026-03-28 20:45:34,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-28 21:46:11] 2026-03-28 20:45:34,250 | INFO     | **************************************
[2026-03-28 21:46:11] 2026-03-28 20:45:34,250 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-28 21:46:11] 2026-03-28 20:45:34,250 | INFO     | **************************************
[2026-03-28 21:46:11] 2026-03-28 20:45:34,250 | INFO     | 
[2026-03-28 21:46:11] 2026-03-28 20:45:34,265 | INFO     | architecture information:
[2026-03-28 21:46:11] 2026-03-28 20:45:34,265 | INFO     | executing command: cat /etc/os-release
[2026-03-28 21:46:11] 2026-03-28 20:45:34,270 | INFO     | cat /etc/os-release:
[2026-03-28 21:46:11] NAME="CentOS Linux"
[2026-03-28 21:46:11] VERSION="7 (Core)"
[2026-03-28 21:46:11] ID="centos"
[2026-03-28 21:46:11] ID_LIKE="rhel fedora"
[2026-03-28 21:46:11] VERSION_ID="7"
[2026-03-28 21:46:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-28 21:46:11] ANSI_COLOR="0;31"
[2026-03-28 21:46:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-28 21:46:11] HOME_URL="https://www.centos.org/"
[2026-03-28 21:46:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-28 21:46:11] 
[2026-03-28 21:46:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-28 21:46:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-28 21:46:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-28 21:46:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-28 21:46:11] 
[2026-03-28 21:46:11] 2026-03-28 20:45:34,270 | INFO     | **************************************
[2026-03-28 21:46:11] 2026-03-28 20:45:34,772 | INFO     | executing command: df -mP /tmp/job_11422209/atlas/pilot/slots/0
[2026-03-28 21:46:11] 2026-03-28 20:45:34,778 | INFO     | sufficient remaining disk space (224092225536 B)
[2026-03-28 21:46:11] 2026-03-28 20:45:34,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-28 21:46:11] 2026-03-28 20:45:34,778 | INFO     | current server update state: UPDATING_FINAL
[2026-03-28 21:46:11] 2026-03-28 20:45:34,778 | INFO     | update_server=False
[2026-03-28 21:46:11] 2026-03-28 20:45:34,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-28 21:46:11] 2026-03-28 20:45:35,388 | INFO     | all data control threads have been joined
[2026-03-28 21:46:11] 2026-03-28 20:45:35,389 | INFO     | all job control threads have been joined
[2026-03-28 21:46:11] 2026-03-28 20:45:35,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-28 21:46:11] 2026-03-28 20:45:35,593 | INFO     | aborting loop
[2026-03-28 21:46:11] 2026-03-28 20:45:35,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-28 21:46:11] 2026-03-28 20:45:35,761 | INFO     | all payload control threads have been joined
[2026-03-28 21:46:11] 2026-03-28 20:45:35,783 | INFO     | [job] retrieve thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:35,838 | INFO     | [payload] validate_pre thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:35,997 | INFO     | [data] copytool_in thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:36,393 | INFO     | [data] control thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:36,394 | INFO     | [job] control thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:36,571 | INFO     | [payload] execute_payloads thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:36,599 | INFO     | [job] job monitor thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:36,767 | INFO     | [payload] control thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:36,852 | INFO     | [payload] failed_post thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:36,911 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:36,915 | INFO     | [payload] validate_post thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:37,115 | INFO     | [job] validate thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:37,246 | INFO     | [job] create_data_payload thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:37,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-28 21:46:11] 2026-03-28 20:45:37,725 | INFO     | [data] copytool_out thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:37,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-28 21:46:11] 2026-03-28 20:45:38,700 | INFO     | [job] queue monitor thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:45:41,877 | INFO     | [data] queue_monitor thread has finished
[2026-03-28 21:46:11] 2026-03-28 20:46:04,688 | INFO     | PID=23095 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-28 21:46:11] 2026-03-28 20:46:04,688 | INFO     | .. there are 8 such processes running
[2026-03-28 21:46:11] 2026-03-28 20:46:04,688 | INFO     | found 0 job(s) in 20 queues
[2026-03-28 21:46:11] 2026-03-28 20:46:04,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-28 21:46:11] 2026-03-28 20:46:04,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-28 21:46:11] 2026-03-28 20:46:05,386 | INFO     | [monitor] cgroup control has ended
[2026-03-28 21:46:11] 2026-03-28 20:46:06,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-28 21:46:11] 2026-03-28 20:46:06,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-28 21:46:11] 2026-03-28 20:46:06,699 | INFO     | [monitor] control thread has ended
[2026-03-28 21:46:11] 2026-03-28 20:46:11,045 | INFO     | all workflow threads have been joined
[2026-03-28 21:46:11] 2026-03-28 20:46:11,045 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-28 21:46:11] 2026-03-28 20:46:11,045 | INFO     | traces error code: 0
[2026-03-28 21:46:11] 2026-03-28 20:46:11,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-28 21:46:11] 2026-03-28 20:46:11,095 [wrapper] ==== pilot stdout END ====
[2026-03-28 21:46:11] 2026-03-28 20:46:11,096 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-28 21:46:11] 2026-03-28 20:46:11,097 [wrapper] pilotpid: 23095
[2026-03-28 21:46:11] 2026-03-28 20:46:11,097 [wrapper] Pilot exit status: 0
[2026-03-28 21:46:11] 2026-03-28 20:46:11,101 [wrapper] pandaids: 7071169275
[2026-03-28 21:46:11] 2026-03-28 20:46:11,124 [wrapper] cleanup supervisor_pilot 23101 23096
[2026-03-28 21:46:11] 2026-03-28 20:46:11,125 [wrapper] Test setup, not cleaning
[2026-03-28 21:46:11] 2026-03-28 20:46:11,125 [wrapper] apfmon messages muted
[2026-03-28 21:46:11] 2026-03-28 20:46:11,126 [wrapper] ==== wrapper stdout END ====
[2026-03-28 21:46:11] 2026-03-28 20:46:11,127 [wrapper] ==== wrapper stderr END ====
[2026-03-28 21:46:11]  *** Error codes and diagnostics ***
[2026-03-28 21:46:11]     "exeErrorCode": 0,
[2026-03-28 21:46:11]     "exeErrorDiag": "",
[2026-03-28 21:46:11]     "pilotErrorCode": 1305,
[2026-03-28 21:46:11]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2026-03-28 21:46:11]  *** Listing of results directory ***
[2026-03-28 21:46:11] total 315392
[2026-03-28 21:46:11] -rwx------ 1 mf493845 unix-user     36322 Mar 27 08:56 runpilot2-wrapper.sh
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user    585013 Mar 27 22:52 pilot3.tar.gz
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user      5118 Mar 28 00:05 queuedata.json
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user       100 Mar 28 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-28 21:46:11] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 28 20:21 run_atlas
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user       105 Mar 28 20:21 job.xml
[2026-03-28 21:46:11] -rw-r--r-- 2 mf493845 unix-user 318869160 Mar 28 21:42 EVNT.48025098._001152.pool.root.1
[2026-03-28 21:46:11] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 28 21:42 start_atlas.sh
[2026-03-28 21:46:11] drwxrwx--x 2 mf493845 unix-user       100 Mar 28 21:42 shared
[2026-03-28 21:46:11] -rw-r--r-- 2 mf493845 unix-user    597528 Mar 28 21:42 input.tar.gz
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user      6389 Mar 28 21:42 init_data.xml
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user         0 Mar 28 21:42 boinc_setup_complete
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user      8192 Mar 28 21:42 boinc_mmap_file
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user         0 Mar 28 21:42 boinc_lockfile
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user      2484 Mar 28 21:42 pandaJob.out
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user   1003389 Mar 28 21:43 agis_schedconf.cvmfs.json
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user   1511579 Mar 28 21:43 agis_ddmendpoints.agis.ALL.json
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user       419 Mar 28 21:43 workernode_map.json
[2026-03-28 21:46:11] drwx------ 5 mf493845 unix-user       440 Mar 28 21:43 pilot3
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user       893 Mar 28 21:43 memory_monitor_summary.json
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user      8233 Mar 28 21:43 log.48080911._006818.job.log.tgz.1
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user      3033 Mar 28 21:45 heartbeat.json
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user        95 Mar 28 21:46 pilot_heartbeat.json
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user      4831 Mar 28 21:46 pilotlog.txt
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user     87862 Mar 28 21:46 log.48080911._006818.job.log.1
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user       188 Mar 28 21:46 output.list
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user       620 Mar 28 21:46 runtime_log
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user    112640 Mar 28 21:46 result.tar.gz
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user      9066 Mar 28 21:46 runtime_log.err
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user       624 Mar 28 21:46 Di0MDmpCHQ9nsSi4ap6QjLDmwznN0nGgGQJmEDGKDmpIFKDmq5wR7n.diag
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user     21910 Mar 28 21:46 stderr.txt
[2026-03-28 21:46:11] No HITS result produced
[2026-03-28 21:46:11]  *** Contents of shared directory: ***
[2026-03-28 21:46:11] total 312108
[2026-03-28 21:46:11] -rw-r--r-- 2 mf493845 unix-user 318869160 Mar 28 21:42 ATLAS.root_0
[2026-03-28 21:46:11] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 28 21:42 start_atlas.sh
[2026-03-28 21:46:11] -rw-r--r-- 2 mf493845 unix-user    597528 Mar 28 21:42 input.tar.gz
[2026-03-28 21:46:11] -rw------- 1 mf493845 unix-user    112640 Mar 28 21:46 result.tar.gz
21:46:12 (19284): run_atlas exited; CPU time 7.364211
21:46:12 (19284): called boinc_finish(0)

</stderr_txt>
]]>

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