Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:25:26 (593776): wrapper (7.7.26015): starting
14:25:26 (593776): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 14:25:26] Arguments: --nthreads 12
[2026-04-04 14:25:26] Threads: 12
[2026-04-04 14:25:26] Checking for CVMFS
[2026-04-04 14:25:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 14:25:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 14:25:26] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 14:25:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 14:25:27] 2.13.3.0 3021178 14872 66888 158080 1 120 3846625 4096001 17872 130560 0 67945385 99.985 933840 2239 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-04 14:25:27] CVMFS is ok
[2026-04-04 14:25:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 14:25:27] Checking for apptainer binary...
[2026-04-04 14:25:27] apptainer is not installed, using version from CVMFS
[2026-04-04 14:25:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 14:25:28] epyc7v12
[2026-04-04 14:25:28] apptainer works
[2026-04-04 14:25:28] Set ATHENA_PROC_NUMBER=12
[2026-04-04 14:25:28] Set ATHENA_CORE_NUMBER=12
[2026-04-04 14:25:28] Starting ATLAS job with PandaID=7071981952
[2026-04-04 14:25:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31430/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 22:16:11]  *** The last 200 lines of the pilot log: ***
[2026-04-04 22:16:11] 2026-04-04 22:15:02,059 | INFO     | log transfer has been attempted: DONE
[2026-04-04 22:16:11] 2026-04-04 22:15:02,059 | INFO     | job 7071981952 has finished - writing final server update
[2026-04-04 22:16:11] 2026-04-04 22:15:02,060 | INFO     | total number of processed events: 400 (read)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,160 | INFO     | using path: /opt/boinc/instance_homes/boinc_31430/slots/2/PanDA_Pilot-7071981952/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,161 | INFO     | extracted standard info from prmon json
[2026-04-04 22:16:11] 2026-04-04 22:15:02,161 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 22:16:11] 2026-04-04 22:15:02,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 22:16:11] 2026-04-04 22:15:02,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 22:16:11] 2026-04-04 22:15:02,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 22:16:11] 2026-04-04 22:15:02,201 | INFO     | fitting pss+swap vs Time
[2026-04-04 22:16:11] 2026-04-04 22:15:02,202 | INFO     | sum of square deviations: 30379399951.99133
[2026-04-04 22:16:11] 2026-04-04 22:15:02,224 | INFO     | sum of deviations: 151755127648.2345
[2026-04-04 22:16:11] 2026-04-04 22:15:02,225 | INFO     | mean x: 1775326857.0043385
[2026-04-04 22:16:11] 2026-04-04 22:15:02,225 | INFO     | mean y: 2648767.8828633404
[2026-04-04 22:16:11] 2026-04-04 22:15:02,233 | INFO     | intersect: -8865694722.370062
[2026-04-04 22:16:11] 2026-04-04 22:15:02,234 | INFO     | chi2: 3.9669349661711695
[2026-04-04 22:16:11] 2026-04-04 22:15:02,236 | INFO     | sum of square deviations: 29401596181.99144
[2026-04-04 22:16:11] 2026-04-04 22:15:02,258 | INFO     | sum of deviations: 213958917178.56577
[2026-04-04 22:16:11] 2026-04-04 22:15:02,258 | INFO     | mean x: 1775326704.504386
[2026-04-04 22:16:11] 2026-04-04 22:15:02,258 | INFO     | mean y: 2658402.9671052634
[2026-04-04 22:16:11] 2026-04-04 22:15:02,258 | INFO     | intersect: -12916605469.060608
[2026-04-04 22:16:11] 2026-04-04 22:15:02,260 | INFO     | chi2: 2.476469320920479
[2026-04-04 22:16:11] 2026-04-04 22:15:02,262 | INFO     | current chi2=2.476469320920479 (change=37.57222283604179 %)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,263 | INFO     | sum of square deviations: 28445002111.99091
[2026-04-04 22:16:11] 2026-04-04 22:15:02,280 | INFO     | sum of deviations: 210696869683.17764
[2026-04-04 22:16:11] 2026-04-04 22:15:02,283 | INFO     | mean x: 1775326552.0044346
[2026-04-04 22:16:11] 2026-04-04 22:15:02,283 | INFO     | mean y: 2657882.911308204
[2026-04-04 22:16:11] 2026-04-04 22:15:02,283 | INFO     | intersect: -13147481663.57448
[2026-04-04 22:16:11] 2026-04-04 22:15:02,284 | INFO     | chi2: 2.4763617061928658
[2026-04-04 22:16:11] 2026-04-04 22:15:02,284 | INFO     | current chi2=2.4763617061928658 (change=0.004345490037127341 %)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,284 | INFO     | right removable region: 450
[2026-04-04 22:16:11] 2026-04-04 22:15:02,289 | INFO     | sum of square deviations: 29401594961.99144
[2026-04-04 22:16:11] 2026-04-04 22:15:02,304 | INFO     | sum of deviations: 38159006642.44296
[2026-04-04 22:16:11] 2026-04-04 22:15:02,304 | INFO     | mean x: 1775327009.504386
[2026-04-04 22:16:11] 2026-04-04 22:15:02,304 | INFO     | mean y: 2666439.528508772
[2026-04-04 22:16:11] 2026-04-04 22:15:02,305 | INFO     | intersect: -2301450573.0268455
[2026-04-04 22:16:11] 2026-04-04 22:15:02,308 | INFO     | chi2: 1.7731364137030936
[2026-04-04 22:16:11] 2026-04-04 22:15:02,308 | INFO     | current chi2=1.7731364137030936 (change=55.30210530740058 %)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,309 | INFO     | sum of square deviations: 28444999671.99091
[2026-04-04 22:16:11] 2026-04-04 22:15:02,319 | INFO     | sum of deviations: -666135395.3924217
[2026-04-04 22:16:11] 2026-04-04 22:15:02,322 | INFO     | mean x: 1775327162.0044346
[2026-04-04 22:16:11] 2026-04-04 22:15:02,322 | INFO     | mean y: 2672625.6962305987
[2026-04-04 22:16:11] 2026-04-04 22:15:02,322 | INFO     | intersect: 44247885.835087806
[2026-04-04 22:16:11] 2026-04-04 22:15:02,323 | INFO     | chi2: 1.5648695072999121
[2026-04-04 22:16:11] 2026-04-04 22:15:02,323 | INFO     | current chi2=1.5648695072999121 (change=11.745678719000981 %)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,323 | INFO     | left removable region: 20
[2026-04-04 22:16:11] 2026-04-04 22:15:02,324 | INFO     | sum of square deviations: 24653663591.49076
[2026-04-04 22:16:11] 2026-04-04 22:15:02,336 | INFO     | sum of deviations: 40771258763.35581
[2026-04-04 22:16:11] 2026-04-04 22:15:02,336 | INFO     | mean x: 1775327131.504651
[2026-04-04 22:16:11] 2026-04-04 22:15:02,337 | INFO     | mean y: 2685738.0720930235
[2026-04-04 22:16:11] 2026-04-04 22:15:02,337 | INFO     | intersect: -2933280415.5816455
[2026-04-04 22:16:11] 2026-04-04 22:15:02,337 | INFO     | chi2: 0.004172576004859167
[2026-04-04 22:16:11] 2026-04-04 22:15:02,337 | INFO     | current memory leak: 1.65 B/s (using 430 data points, chi2=0.00)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,338 | INFO     | could have reported an average CPU frequency of 2396 MHz (19 samples)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | ..............................
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | . Timing measurements:
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | . get job = 0 s
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | . initial setup = 17 s
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | . payload setup = 32 s
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | . stage-in = 0 s
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | . payload execution = 28078 s
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | . stage-out = 3 s
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | . log creation = 0 s
[2026-04-04 22:16:11] 2026-04-04 22:15:02,339 | INFO     | ..............................
[2026-04-04 22:16:11] 2026-04-04 22:15:02,784 | INFO     | 
[2026-04-04 22:16:11] 2026-04-04 22:15:02,784 | INFO     | job summary report
[2026-04-04 22:16:11] 2026-04-04 22:15:02,784 | INFO     | --------------------------------------------------
[2026-04-04 22:16:11] 2026-04-04 22:15:02,784 | INFO     | PanDA job id: 7071981952
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | task id: 49176097
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | errors: (none)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | pilot state: finished 
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | transexitcode: 0
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | exeerrorcode: 0
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | exeerrordiag: 
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | exitcode: 0
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | exitmsg: OK
[2026-04-04 22:16:11] 2026-04-04 22:15:02,785 | INFO     | cpuconsumptiontime: 130405 s
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | nevents: 400
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | neventsw: 0
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | pid: 656281
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | pgrp: 656281
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | corecount: 12
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | event service: False
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | sizes: {0: 2279858, 1: 2279942, 2: 2280403, 28115: 2317293, 28119: 2326337, 28120: 2326393, 28122: 2326715}
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | --------------------------------------------------
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | 
[2026-04-04 22:16:11] 2026-04-04 22:15:02,786 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31430/slots/2
[2026-04-04 22:16:11] 2026-04-04 22:15:02,863 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,864 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,865 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,865 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 22:16:11] 2026-04-04 22:15:02,865 | INFO     | job 7071981952 has completed (purged errors)
[2026-04-04 22:16:11] 2026-04-04 22:15:02,866 | INFO     | overall cleanup function is called
[2026-04-04 22:16:11] 2026-04-04 22:15:03,891 | INFO     | --- collectZombieJob: --- 10, [656281]
[2026-04-04 22:16:11] 2026-04-04 22:15:03,891 | INFO     | zombie collector waiting for pid 656281
[2026-04-04 22:16:11] 2026-04-04 22:15:03,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 22:16:11] 2026-04-04 22:15:03,892 | INFO     | collected zombie processes
[2026-04-04 22:16:11] 2026-04-04 22:15:03,892 | INFO     | will attempt to kill all subprocesses of pid=656281
[2026-04-04 22:16:11] 2026-04-04 22:15:05,565 | INFO     | process IDs to be killed: [656281] (in reverse order)
[2026-04-04 22:16:11] 2026-04-04 22:15:06,251 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 22:16:11] 2026-04-04 22:15:06,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 22:16:11] 2026-04-04 22:15:06,317 | INFO     | did not find any defunct processes belonging to 656281
[2026-04-04 22:16:11] 2026-04-04 22:15:06,357 | INFO     | did not find any defunct processes belonging to 656281
[2026-04-04 22:16:11] 2026-04-04 22:15:06,357 | INFO     | ready for new job
[2026-04-04 22:16:11] 2026-04-04 22:15:06,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 22:16:11] 2026-04-04 22:15:06,374 | INFO     | **************************************
[2026-04-04 22:16:11] 2026-04-04 22:15:06,374 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 22:16:11] 2026-04-04 22:15:06,374 | INFO     | **************************************
[2026-04-04 22:16:11] 2026-04-04 22:15:06,374 | INFO     | 
[2026-04-04 22:16:11] 2026-04-04 22:15:06,418 | INFO     | architecture information:
[2026-04-04 22:16:11] 2026-04-04 22:15:06,429 | INFO     | executing command: cat /etc/os-release
[2026-04-04 22:16:11] 2026-04-04 22:15:06,485 | INFO     | cat /etc/os-release:
[2026-04-04 22:16:11] NAME="CentOS Linux"
[2026-04-04 22:16:11] VERSION="7 (Core)"
[2026-04-04 22:16:11] ID="centos"
[2026-04-04 22:16:11] ID_LIKE="rhel fedora"
[2026-04-04 22:16:11] VERSION_ID="7"
[2026-04-04 22:16:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 22:16:11] ANSI_COLOR="0;31"
[2026-04-04 22:16:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 22:16:11] HOME_URL="https://www.centos.org/"
[2026-04-04 22:16:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 22:16:11] 
[2026-04-04 22:16:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 22:16:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 22:16:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 22:16:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 22:16:11] 
[2026-04-04 22:16:11] 2026-04-04 22:15:06,485 | INFO     | **************************************
[2026-04-04 22:16:11] 2026-04-04 22:15:06,988 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31430/slots/2
[2026-04-04 22:16:11] 2026-04-04 22:15:07,070 | INFO     | sufficient remaining disk space (360531886080 B)
[2026-04-04 22:16:11] 2026-04-04 22:15:07,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 22:16:11] 2026-04-04 22:15:07,071 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 22:16:11] 2026-04-04 22:15:07,071 | INFO     | update_server=False
[2026-04-04 22:16:11] 2026-04-04 22:15:07,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 22:16:11] 2026-04-04 22:15:07,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 22:16:11] 2026-04-04 22:15:07,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 22:16:11] 2026-04-04 22:15:07,158 | INFO     | all payload control threads have been joined
[2026-04-04 22:16:11] 2026-04-04 22:15:07,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 22:16:11] 2026-04-04 22:15:07,295 | INFO     | aborting loop
[2026-04-04 22:16:11] 2026-04-04 22:15:07,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 22:16:11] 2026-04-04 22:15:08,015 | INFO     | all job control threads have been joined
[2026-04-04 22:16:11] 2026-04-04 22:15:08,062 | INFO     | all data control threads have been joined
[2026-04-04 22:16:11] 2026-04-04 22:15:08,083 | INFO     | [job] retrieve thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,095 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,096 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,096 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,101 | INFO     | [data] copytool_in thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,163 | INFO     | [payload] control thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,300 | INFO     | [job] job monitor thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,501 | INFO     | [job] queue monitor thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,662 | INFO     | [payload] failed_post thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,763 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:08,922 | INFO     | [payload] validate_post thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:09,020 | INFO     | [job] control thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:09,067 | INFO     | [data] control thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:09,079 | INFO     | [data] copytool_out thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:09,297 | INFO     | [job] validate thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:11,091 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 22:16:11] 2026-04-04 22:15:36,021 | INFO     | PID=618560 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-04 22:16:11] 2026-04-04 22:15:36,022 | INFO     | .. there are 28 such processes running
[2026-04-04 22:16:11] 2026-04-04 22:15:36,022 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 22:16:11] 2026-04-04 22:15:36,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 22:16:11] 2026-04-04 22:15:36,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 22:16:11] 2026-04-04 22:16:04,467 | INFO     | [monitor] cgroup control has ended
[2026-04-04 22:16:11] 2026-04-04 22:16:05,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123828223043392)>', '<ExcThread(monitor, started 123827824600832)>']
[2026-04-04 22:16:11] 2026-04-04 22:16:05,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 22:16:11] 2026-04-04 22:16:05,180 | INFO     | [monitor] control thread has ended
[2026-04-04 22:16:11] 2026-04-04 22:16:10,051 | INFO     | all workflow threads have been joined
[2026-04-04 22:16:11] 2026-04-04 22:16:10,051 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 22:16:11] 2026-04-04 22:16:10,052 | INFO     | traces error code: 0
[2026-04-04 22:16:11] 2026-04-04 22:16:10,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 22:16:11] 2026-04-04 22:16:10,446 [wrapper] ==== pilot stdout END ====
[2026-04-04 22:16:11] 2026-04-04 22:16:10,461 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 22:16:11] 2026-04-04 22:16:10,472 [wrapper] pilotpid: 618560
[2026-04-04 22:16:11] 2026-04-04 22:16:10,489 [wrapper] Pilot exit status: 0
[2026-04-04 22:16:11] 2026-04-04 22:16:10,531 [wrapper] pandaids: 7071981952
[2026-04-04 22:16:11] 2026-04-04 22:16:10,712 [wrapper] cleanup supervisor_pilot 1437150 618561
[2026-04-04 22:16:11] ./runpilot2-wrapper.sh: line 616: 1437150 Terminated              sleep 900
[2026-04-04 22:16:11] 2026-04-04 22:16:10,727 [wrapper] Test setup, not cleaning
[2026-04-04 22:16:11] 2026-04-04 22:16:10,734 [wrapper] apfmon messages muted
[2026-04-04 22:16:11] 2026-04-04 22:16:10,742 [wrapper] ==== wrapper stdout END ====
[2026-04-04 22:16:11] 2026-04-04 22:16:10,751 [wrapper] ==== wrapper stderr END ====
[2026-04-04 22:16:11]  *** Error codes and diagnostics ***
[2026-04-04 22:16:11]     "exeErrorCode": 0,
[2026-04-04 22:16:11]     "exeErrorDiag": "",
[2026-04-04 22:16:11]     "pilotErrorCode": 0,
[2026-04-04 22:16:11]     "pilotErrorDiag": "",
[2026-04-04 22:16:11]  *** Listing of results directory ***
[2026-04-04 22:16:11] total 472344
[2026-04-04 22:16:11] -rw-r--r-- 1 boinc boinc      5118 Mar 28 09:12 queuedata.json
[2026-04-04 22:16:11] -rw-r--r-- 1 boinc boinc    585013 Mar 28 09:12 pilot3.tar.gz
[2026-04-04 22:16:11] -rwx------ 1 boinc boinc     36322 Mar 28 09:12 runpilot2-wrapper.sh
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc       100 Apr  4 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 22:16:11] -rwxr-xr-x 1 boinc boinc      7986 Apr  4 14:25 run_atlas
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc       105 Apr  4 14:25 job.xml
[2026-04-04 22:16:11] -rw-r--r-- 2 boinc boinc 242151666 Apr  4 14:25 EVNT.49132545._000003.pool.root.1
[2026-04-04 22:16:11] -rw-r--r-- 2 boinc boinc     15845 Apr  4 14:25 start_atlas.sh
[2026-04-04 22:16:11] drwxrwx--x 2 boinc boinc      4096 Apr  4 14:25 shared
[2026-04-04 22:16:11] -rw-r--r-- 2 boinc boinc    597548 Apr  4 14:25 input.tar.gz
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc      6557 Apr  4 14:25 init_data.xml
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc         0 Apr  4 14:25 boinc_setup_complete
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc         0 Apr  4 14:25 boinc_lockfile
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc      2609 Apr  4 14:25 pandaJob.out
[2026-04-04 22:16:11] -rw------- 1 boinc boinc   1005123 Apr  4 14:26 agis_schedconf.cvmfs.json
[2026-04-04 22:16:11] -rw------- 1 boinc boinc       417 Apr  4 14:26 workernode_map.json
[2026-04-04 22:16:11] drwx------ 5 boinc boinc      4096 Apr  4 14:26 pilot3
[2026-04-04 22:16:11] -rw------- 1 boinc boinc 228901748 Apr  4 22:13 HITS.49176097._001020.pool.root.1
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc       532 Apr  4 22:13 boinc_task_state.xml
[2026-04-04 22:16:11] -rw------- 1 boinc boinc        95 Apr  4 22:14 pilot_heartbeat.json
[2026-04-04 22:16:11] -rw------- 1 boinc boinc      1024 Apr  4 22:14 memory_monitor_summary.json
[2026-04-04 22:16:11] -rw------- 1 boinc boinc   1511579 Apr  4 22:14 agis_ddmendpoints.agis.ALL.json
[2026-04-04 22:16:11] -rw------- 1 boinc boinc    688742 Apr  4 22:14 log.49176097._001020.job.log.tgz.1
[2026-04-04 22:16:11] -rw------- 1 boinc boinc      6273 Apr  4 22:15 heartbeat.json
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc      8192 Apr  4 22:16 boinc_mmap_file
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc        29 Apr  4 22:16 wrapper_checkpoint.txt
[2026-04-04 22:16:11] -rw------- 1 boinc boinc      4843 Apr  4 22:16 pilotlog.txt
[2026-04-04 22:16:11] -rw------- 1 boinc boinc   3651805 Apr  4 22:16 log.49176097._001020.job.log.1
[2026-04-04 22:16:11] -rw------- 1 boinc boinc       357 Apr  4 22:16 output.list
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc       620 Apr  4 22:16 runtime_log
[2026-04-04 22:16:11] -rw------- 1 boinc boinc   4362240 Apr  4 22:16 result.tar.gz
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc      9167 Apr  4 22:16 runtime_log.err
[2026-04-04 22:16:11] -rw------- 1 boinc boinc       658 Apr  4 22:16 6xMODmMteQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmY3JKDmIjoqcn.diag
[2026-04-04 22:16:11] -rw-rw-r-- 1 boinc boinc     20898 Apr  4 22:16 stderr.txt
[2026-04-04 22:16:11] HITS file was successfully produced:
[2026-04-04 22:16:11] -rw------- 1 boinc boinc 228901748 Apr  4 22:13 shared/HITS.pool.root.1
[2026-04-04 22:16:11]  *** Contents of shared directory: ***
[2026-04-04 22:16:11] total 464888
[2026-04-04 22:16:11] -rw-r--r-- 2 boinc boinc 242151666 Apr  4 14:25 ATLAS.root_0
[2026-04-04 22:16:11] -rw-r--r-- 2 boinc boinc     15845 Apr  4 14:25 start_atlas.sh
[2026-04-04 22:16:11] -rw-r--r-- 2 boinc boinc    597548 Apr  4 14:25 input.tar.gz
[2026-04-04 22:16:11] -rw------- 1 boinc boinc 228901748 Apr  4 22:13 HITS.pool.root.1
[2026-04-04 22:16:11] -rw------- 1 boinc boinc   4362240 Apr  4 22:16 result.tar.gz
22:16:12 (593776): run_atlas exited; CPU time 132302.009787
22:16:12 (593776): called boinc_finish(0)

</stderr_txt>
]]>

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