Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:11:22 (23267): wrapper (7.7.26015): starting
19:11:22 (23267): wrapper: running run_atlas (--nthreads 8)
[2026-03-28 19:11:22] Arguments: --nthreads 8
[2026-03-28 19:11:22] Threads: 8
[2026-03-28 19:11:22] Checking for CVMFS
[2026-03-28 19:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 19:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 19:11:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 19:11:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 19:11:24] 2.11.0.0 4363 241302 90236 157809 3 50 4070199 4096000 5502 130560 3 20111283 99.659 13281256 341 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-28 19:11:24] CVMFS is ok
[2026-03-28 19:11:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-28 19:11:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-28 19:11:24] Further information can be found at the LHC@home message board.
[2026-03-28 19:11:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 19:11:24] Checking for apptainer binary...
[2026-03-28 19:11:24] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-28 19:11:24] apptainer is not installed, using version from CVMFS
[2026-03-28 19:11:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 19:11:25] WARNING: Environment variable TMPDIR already has value [/tmp/job_11421831/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node197
[2026-03-28 19:11:25] apptainer works
[2026-03-28 19:11:25] Set ATHENA_PROC_NUMBER=8
[2026-03-28 19:11:25] Set ATHENA_CORE_NUMBER=8
[2026-03-28 19:11:25] Starting ATLAS job with PandaID=7072013458
[2026-03-28 19:11:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11421831/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-28 20:45:46]  *** The last 200 lines of the pilot log: ***
[2026-03-28 20:45:46]  filesize=356176
[2026-03-28 20:45:46]  filetype=log
[2026-03-28 20:45:46]  guid=39a369b0-d164-4032-b487-b9adffea4a47
[2026-03-28 20:45:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-28 20:45:46]  is_altstaged=None
[2026-03-28 20:45:46]  is_tar=False
[2026-03-28 20:45:46]  lfn=log.49190790._000048.job.log.tgz.1
[2026-03-28 20:45:46]  mtime=0
[2026-03-28 20:45:46]  protocol_id=None
[2026-03-28 20:45:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-28 20:45:46]  replicas=None
[2026-03-28 20:45:46]  scope=mc23_13p6TeV
[2026-03-28 20:45:46]  status=None
[2026-03-28 20:45:46]  status_code=0
[2026-03-28 20:45:46]  storage_token=
[2026-03-28 20:45:46]  surl=/tmp/job_11421831/atlas/pilot/slots/0/PanDA_Pilot-7072013458/log.49190790._000048.job.log.tgz.1
[2026-03-28 20:45:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/f0/log.49190790._000048.job.log.tgz.1
[2026-03-28 20:45:46]  workdir=None
[2026-03-28 20:45:46] ]
[2026-03-28 20:45:46] 2026-03-28 19:44:38,283 | INFO     | transferring file log.49190790._000048.job.log.tgz.1 from /tmp/job_11421831/atlas/pilot/slots/0/PanDA_Pilot-7072013458/log.49190790._000048.job.log.tgz.1 to /tmp/j
[2026-03-28 20:45:46] 2026-03-28 19:44:38,283 | INFO     | executing command: /usr/bin/env mv /tmp/job_11421831/atlas/pilot/slots/0/PanDA_Pilot-7072013458/log.49190790._000048.job.log.tgz.1 /tmp/job_11421831/atlas/pilot/sl
[2026-03-28 20:45:46] 2026-03-28 19:44:38,291 | INFO     | adding to output.list: log.49190790._000048.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/f0/log.49190790._000048.job.log.tg
[2026-03-28 20:45:46] 2026-03-28 19:44:38,291 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-28 20:45:46] 2026-03-28 19:44:38,291 | INFO     | summary of transferred files:
[2026-03-28 20:45:46] 2026-03-28 19:44:38,291 | INFO     |  -- lfn=log.49190790._000048.job.log.tgz.1, status_code=0, status=transferred
[2026-03-28 20:45:46] 2026-03-28 19:44:38,292 | INFO     | stage-out finished correctly
[2026-03-28 20:45:46] 2026-03-28 19:44:38,404 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-28 20:45:46] 2026-03-28 19:44:38,900 | WARNING  | process 31584 can no longer be monitored (due to stat problems) - aborting
[2026-03-28 20:45:46] 2026-03-28 19:44:38,901 | INFO     | using path: /tmp/job_11421831/atlas/pilot/slots/0/PanDA_Pilot-7072013458/memory_monitor_summary.json (trf name=prmon)
[2026-03-28 20:45:46] 2026-03-28 19:44:38,989 | INFO     | number of running child processes to parent process 31584: 1
[2026-03-28 20:45:46] 2026-03-28 19:44:38,989 | INFO     | maximum number of monitored processes: 6
[2026-03-28 20:45:46] 2026-03-28 19:44:39,151 | INFO     | job 7072013458 has state=finished
[2026-03-28 20:45:46] 2026-03-28 19:44:39,151 | INFO     | preparing for final server update for job 7072013458 in state='finished'
[2026-03-28 20:45:46] 2026-03-28 19:44:39,151 | INFO     | reading metadata from: /tmp/job_11421831/atlas/pilot/slots/0/PanDA_Pilot-7072013458/jobReport.json
[2026-03-28 20:45:46] 2026-03-28 19:44:39,153 | INFO     | added worker_node to metadata from /tmp/job_11421831/atlas/pilot/slots/0/workernode_map.json
[2026-03-28 20:45:46] 2026-03-28 19:44:39,153 | INFO     | this job has now completed (state=finished)
[2026-03-28 20:45:46] 2026-03-28 19:44:39,153 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-28 20:45:46] 2026-03-28 19:44:39,153 | INFO     | log transfer has been attempted: DONE
[2026-03-28 20:45:46] 2026-03-28 19:44:39,153 | INFO     | job 7072013458 has finished - writing final server update
[2026-03-28 20:45:46] 2026-03-28 19:44:39,153 | INFO     | total number of processed events: 400 (read)
[2026-03-28 20:45:46] 2026-03-28 19:44:39,169 | INFO     | using path: /tmp/job_11421831/atlas/pilot/slots/0/PanDA_Pilot-7072013458/memory_monitor_summary.json (trf name=prmon)
[2026-03-28 20:45:46] 2026-03-28 19:44:39,170 | INFO     | extracted standard info from prmon json
[2026-03-28 20:45:46] 2026-03-28 19:44:39,170 | INFO     | extracted standard memory fields from prmon json
[2026-03-28 20:45:46] 2026-03-28 19:44:39,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-28 20:45:46] 2026-03-28 19:44:39,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-28 20:45:46] 2026-03-28 19:44:39,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-28 20:45:46] 2026-03-28 19:44:39,171 | INFO     | fitting pss+swap vs Time
[2026-03-28 20:45:46] 2026-03-28 19:44:39,171 | INFO     | sum of square deviations: 190403570.0
[2026-03-28 20:45:46] 2026-03-28 19:44:39,171 | INFO     | sum of deviations: 3175999403.9999995
[2026-03-28 20:45:46] 2026-03-28 19:44:39,171 | INFO     | mean x: 1774724375.0
[2026-03-28 20:45:46] 2026-03-28 19:44:39,171 | INFO     | mean y: 2565334.623529412
[2026-03-28 20:45:46] 2026-03-28 19:44:39,171 | INFO     | intersect: -29600469720.151295
[2026-03-28 20:45:46] 2026-03-28 19:44:39,171 | INFO     | chi2: 0.0022632083948789907
[2026-03-28 20:45:46] 2026-03-28 19:44:39,171 | INFO     | current memory leak: 16.68 B/s (using 85 data points, chi2=0.00)
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | could have reported an average CPU frequency of 3067 MHz (7 samples)
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | ..............................
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | . Timing measurements:
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | . get job = 0 s
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | . initial setup = 2 s
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | . payload setup = 3 s
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | . stage-in = 0 s
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | . payload execution = 5568 s
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | . stage-out = 0 s
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | . log creation = 0 s
[2026-03-28 20:45:46] 2026-03-28 19:44:39,172 | INFO     | ..............................
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | 
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | job summary report
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | --------------------------------------------------
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | PanDA job id: 7072013458
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | task id: 49190790
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | errors: (none)
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | pilot state: finished 
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | transexitcode: 0
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | exeerrorcode: 0
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | exeerrordiag: 
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | exitcode: 0
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | exitmsg: OK
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | cpuconsumptiontime: 41306 s
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | nevents: 400
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | neventsw: 0
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | pid: 31584
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | pgrp: 31584
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | corecount: 8
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | event service: False
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | sizes: {0: 2280351, 11: 2280351, 5575: 2316177, 5576: 2316315}
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | --------------------------------------------------
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | 
[2026-03-28 20:45:46] 2026-03-28 19:44:39,219 | INFO     | executing command: ls -lF /tmp/job_11421831/atlas/pilot/slots/0
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,230 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-28 20:45:46] 2026-03-28 19:44:39,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,230 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-28 20:45:46] 2026-03-28 19:44:39,230 | INFO     | job 7072013458 has completed (purged errors)
[2026-03-28 20:45:46] 2026-03-28 19:44:39,230 | INFO     | overall cleanup function is called
[2026-03-28 20:45:46] 2026-03-28 19:44:40,236 | INFO     | --- collectZombieJob: --- 10, [31584]
[2026-03-28 20:45:46] 2026-03-28 19:44:40,236 | INFO     | zombie collector waiting for pid 31584
[2026-03-28 20:45:46] 2026-03-28 19:44:40,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-28 20:45:46] 2026-03-28 19:44:40,236 | INFO     | collected zombie processes
[2026-03-28 20:45:46] 2026-03-28 19:44:40,236 | INFO     | will attempt to kill all subprocesses of pid=31584
[2026-03-28 20:45:46] 2026-03-28 19:44:40,329 | INFO     | process IDs to be killed: [31584] (in reverse order)
[2026-03-28 20:45:46] 2026-03-28 19:44:40,360 | WARNING  | found no corresponding commands to process id(s)
[2026-03-28 20:45:46] 2026-03-28 19:44:40,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-28 20:45:46] 2026-03-28 19:44:40,364 | INFO     | did not find any defunct processes belonging to 31584
[2026-03-28 20:45:46] 2026-03-28 19:44:40,367 | INFO     | did not find any defunct processes belonging to 31584
[2026-03-28 20:45:46] 2026-03-28 19:44:40,367 | INFO     | ready for new job
[2026-03-28 20:45:46] 2026-03-28 19:44:40,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-28 20:45:46] 2026-03-28 19:44:40,367 | INFO     | **************************************
[2026-03-28 20:45:46] 2026-03-28 19:44:40,368 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-28 20:45:46] 2026-03-28 19:44:40,368 | INFO     | **************************************
[2026-03-28 20:45:46] 2026-03-28 19:44:40,368 | INFO     | 
[2026-03-28 20:45:46] 2026-03-28 19:44:40,382 | INFO     | architecture information:
[2026-03-28 20:45:46] 2026-03-28 19:44:40,382 | INFO     | executing command: cat /etc/os-release
[2026-03-28 20:45:46] 2026-03-28 19:44:40,388 | INFO     | cat /etc/os-release:
[2026-03-28 20:45:46] NAME="CentOS Linux"
[2026-03-28 20:45:46] VERSION="7 (Core)"
[2026-03-28 20:45:46] ID="centos"
[2026-03-28 20:45:46] ID_LIKE="rhel fedora"
[2026-03-28 20:45:46] VERSION_ID="7"
[2026-03-28 20:45:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-28 20:45:46] ANSI_COLOR="0;31"
[2026-03-28 20:45:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-28 20:45:46] HOME_URL="https://www.centos.org/"
[2026-03-28 20:45:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-28 20:45:46] 
[2026-03-28 20:45:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-28 20:45:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-28 20:45:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-28 20:45:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-28 20:45:46] 
[2026-03-28 20:45:46] 2026-03-28 19:44:40,388 | INFO     | **************************************
[2026-03-28 20:45:46] 2026-03-28 19:44:40,891 | INFO     | executing command: df -mP /tmp/job_11421831/atlas/pilot/slots/0
[2026-03-28 20:45:46] 2026-03-28 19:44:40,897 | INFO     | sufficient remaining disk space (224381632512 B)
[2026-03-28 20:45:46] 2026-03-28 19:44:40,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-28 20:45:46] 2026-03-28 19:44:40,897 | INFO     | current server update state: UPDATING_FINAL
[2026-03-28 20:45:46] 2026-03-28 19:44:40,897 | INFO     | update_server=False
[2026-03-28 20:45:46] 2026-03-28 19:44:40,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-28 20:45:46] 2026-03-28 19:44:40,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-28 20:45:46] 2026-03-28 19:44:40,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-28 20:45:46] 2026-03-28 19:44:40,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-28 20:45:46] 2026-03-28 19:44:40,897 | INFO     | aborting loop
[2026-03-28 20:45:46] 2026-03-28 19:44:41,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-28 20:45:46] 2026-03-28 19:44:41,391 | INFO     | all data control threads have been joined
[2026-03-28 20:45:46] 2026-03-28 19:44:41,902 | INFO     | [job] retrieve thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:41,903 | INFO     | [job] queue monitor thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:41,903 | INFO     | [job] job monitor thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:42,051 | INFO     | [payload] failed_post thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:42,063 | INFO     | all payload control threads have been joined
[2026-03-28 20:45:46] 2026-03-28 19:44:42,091 | INFO     | [payload] validate_post thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:42,138 | INFO     | all job control threads have been joined
[2026-03-28 20:45:46] 2026-03-28 19:44:42,372 | INFO     | [job] validate thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:42,396 | INFO     | [data] control thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:42,481 | INFO     | [job] create_data_payload thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:42,637 | INFO     | [payload] validate_pre thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:42,928 | INFO     | [data] copytool_in thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:43,069 | INFO     | [payload] control thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:43,143 | INFO     | [job] control thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:43,352 | INFO     | [payload] execute_payloads thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:43,352 | INFO     | [data] copytool_out thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:44,526 | INFO     | job.realtimelogging is not enabled
[2026-03-28 20:45:46] 2026-03-28 19:44:44,903 | INFO     | [data] queue_monitor thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:44:45,531 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-28 20:45:46] 2026-03-28 19:45:11,006 | INFO     | PID=27035 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-28 20:45:46] 2026-03-28 19:45:11,007 | INFO     | found 0 job(s) in 20 queues
[2026-03-28 20:45:46] 2026-03-28 19:45:11,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-28 20:45:46] 2026-03-28 19:45:11,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-28 20:45:46] 2026-03-28 19:45:40,376 | INFO     | [monitor] cgroup control has ended
[2026-03-28 20:45:46] 2026-03-28 19:45:41,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-28 20:45:46] 2026-03-28 19:45:42,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-28 20:45:46] 2026-03-28 19:45:42,163 | INFO     | [monitor] control thread has ended
[2026-03-28 20:45:46] 2026-03-28 19:45:46,215 | INFO     | all workflow threads have been joined
[2026-03-28 20:45:46] 2026-03-28 19:45:46,215 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-28 20:45:46] 2026-03-28 19:45:46,215 | INFO     | traces error code: 0
[2026-03-28 20:45:46] 2026-03-28 19:45:46,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-28 20:45:46] 2026-03-28 19:45:46,267 [wrapper] ==== pilot stdout END ====
[2026-03-28 20:45:46] 2026-03-28 19:45:46,268 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-28 20:45:46] 2026-03-28 19:45:46,269 [wrapper] pilotpid: 27035
[2026-03-28 20:45:46] 2026-03-28 19:45:46,271 [wrapper] Pilot exit status: 0
[2026-03-28 20:45:46] 2026-03-28 19:45:46,275 [wrapper] pandaids: 7072013458
[2026-03-28 20:45:46] 2026-03-28 19:45:46,296 [wrapper] cleanup supervisor_pilot 26887 27036
[2026-03-28 20:45:46] 2026-03-28 19:45:46,297 [wrapper] Test setup, not cleaning
[2026-03-28 20:45:46] 2026-03-28 19:45:46,298 [wrapper] apfmon messages muted
[2026-03-28 20:45:46] 2026-03-28 19:45:46,300 [wrapper] ==== wrapper stdout END ====
[2026-03-28 20:45:46] 2026-03-28 19:45:46,301 [wrapper] ==== wrapper stderr END ====
[2026-03-28 20:45:46]  *** Error codes and diagnostics ***
[2026-03-28 20:45:46]     "exeErrorCode": 0,
[2026-03-28 20:45:46]     "exeErrorDiag": "",
[2026-03-28 20:45:46]     "pilotErrorCode": 0,
[2026-03-28 20:45:46]     "pilotErrorDiag": "",
[2026-03-28 20:45:46]  *** Listing of results directory ***
[2026-03-28 20:45:46] total 491048
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user    585013 Mar 28 13:19 pilot3.tar.gz
[2026-03-28 20:45:46] -rwx------ 1 mf493845 unix-user     36322 Mar 28 13:20 runpilot2-wrapper.sh
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user      5118 Mar 28 13:20 queuedata.json
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user       100 Mar 28 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-28 20:45:46] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 28 18:05 run_atlas
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user       105 Mar 28 18:05 job.xml
[2026-03-28 20:45:46] -rw-r--r-- 2 mf493845 unix-user 258189306 Mar 28 19:11 EVNT.49124643._000001.pool.root.1
[2026-03-28 20:45:46] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 28 19:11 start_atlas.sh
[2026-03-28 20:45:46] drwxrwx--x 2 mf493845 unix-user       100 Mar 28 19:11 shared
[2026-03-28 20:45:46] -rw-r--r-- 2 mf493845 unix-user    597542 Mar 28 19:11 input.tar.gz
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user      6391 Mar 28 19:11 init_data.xml
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user         0 Mar 28 19:11 boinc_setup_complete
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user      8192 Mar 28 19:11 boinc_mmap_file
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user         0 Mar 28 19:11 boinc_lockfile
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user      2595 Mar 28 19:11 pandaJob.out
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user   1003321 Mar 28 19:11 agis_schedconf.cvmfs.json
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user   1511579 Mar 28 19:11 agis_ddmendpoints.agis.ALL.json
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user       415 Mar 28 19:11 workernode_map.json
[2026-03-28 20:45:46] drwx------ 5 mf493845 unix-user       440 Mar 28 19:11 pilot3
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user 238370907 Mar 28 20:44 HITS.49190790._000048.pool.root.1
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user      1023 Mar 28 20:44 memory_monitor_summary.json
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user    356176 Mar 28 20:44 log.49190790._000048.job.log.tgz.1
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user      6305 Mar 28 20:44 heartbeat.json
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user        95 Mar 28 20:45 pilot_heartbeat.json
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user      4828 Mar 28 20:45 pilotlog.txt
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user    827756 Mar 28 20:45 log.49190790._000048.job.log.1
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user       357 Mar 28 20:45 output.list
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user       620 Mar 28 20:45 runtime_log
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user   1198080 Mar 28 20:45 result.tar.gz
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user      9219 Mar 28 20:45 runtime_log.err
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user       646 Mar 28 20:45 1BBMDmbphQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDm2SKKDmH8dRQo.diag
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user     21725 Mar 28 20:45 stderr.txt
[2026-03-28 20:45:46] HITS file was successfully produced:
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user 238370907 Mar 28 20:44 shared/HITS.pool.root.1
[2026-03-28 20:45:46]  *** Contents of shared directory: ***
[2026-03-28 20:45:46] total 486700
[2026-03-28 20:45:46] -rw-r--r-- 2 mf493845 unix-user 258189306 Mar 28 19:11 ATLAS.root_0
[2026-03-28 20:45:46] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 28 19:11 start_atlas.sh
[2026-03-28 20:45:46] -rw-r--r-- 2 mf493845 unix-user    597542 Mar 28 19:11 input.tar.gz
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user 238370907 Mar 28 20:44 HITS.pool.root.1
[2026-03-28 20:45:46] -rw------- 1 mf493845 unix-user   1198080 Mar 28 20:45 result.tar.gz
20:45:47 (23267): run_atlas exited; CPU time 41382.473572
20:45:47 (23267): called boinc_finish(0)

</stderr_txt>
]]>

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