Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:51:18 (2988027): wrapper (7.7.26015): starting
04:51:18 (2988027): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 04:51:18] Arguments: --nthreads 4
[2026-04-03 04:51:18] Threads: 4
[2026-04-03 04:51:18] Checking for CVMFS
[2026-04-03 04:51:18] No cvmfs_config command found, will try listing directly
[2026-04-03 04:51:18] CVMFS is ok
[2026-04-03 04:51:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 04:51:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 04:51:18] Further information can be found at the LHC@home message board.
[2026-04-03 04:51:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 04:51:18] Checking for apptainer binary...
[2026-04-03 04:51:18] which: no apptainer in ((null))
[2026-04-03 04:51:18] apptainer is not installed, using version from CVMFS
[2026-04-03 04:51:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 04:51:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-04-03 04:51:18] apptainer works
[2026-04-03 04:51:18] Set ATHENA_PROC_NUMBER=4
[2026-04-03 04:51:18] Set ATHENA_CORE_NUMBER=4
[2026-04-03 04:51:18] Starting ATLAS job with PandaID=7072015510
[2026-04-03 04:51:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 09:31:14]  *** The last 200 lines of the pilot log: ***
[2026-04-03 09:31:14] 2026-04-03 07:30:16,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 09:31:14] 2026-04-03 07:30:16,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 09:31:14] 2026-04-03 07:30:16,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 09:31:14] 2026-04-03 07:30:16,268 | INFO     | fitting pss+swap vs Time
[2026-04-03 09:31:14] 2026-04-03 07:30:16,268 | INFO     | sum of square deviations: 6378584712.5
[2026-04-03 09:31:14] 2026-04-03 07:30:16,270 | INFO     | sum of deviations: 28601145487.49999
[2026-04-03 09:31:14] 2026-04-03 07:30:16,270 | INFO     | mean x: 1775193060.5
[2026-04-03 09:31:14] 2026-04-03 07:30:16,270 | INFO     | mean y: 2325530.4124087594
[2026-04-03 09:31:14] 2026-04-03 07:30:16,271 | INFO     | intersect: -7957520937.137483
[2026-04-03 09:31:14] 2026-04-03 07:30:16,271 | INFO     | chi2: 2.1136175743480967
[2026-04-03 09:31:14] 2026-04-03 07:30:16,272 | INFO     | sum of square deviations: 6035722470.0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,274 | INFO     | sum of deviations: 44850182229.000015
[2026-04-03 09:31:14] 2026-04-03 07:30:16,274 | INFO     | mean x: 1775192908.0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,274 | INFO     | mean y: 2332646.1226765797
[2026-04-03 09:31:14] 2026-04-03 07:30:16,274 | INFO     | intersect: -13188751902.77118
[2026-04-03 09:31:14] 2026-04-03 07:30:16,274 | INFO     | chi2: 1.345488301062331
[2026-04-03 09:31:14] 2026-04-03 07:30:16,274 | INFO     | current chi2=1.345488301062331 (change=36.3419230899743 %)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,275 | INFO     | sum of square deviations: 5705372090.0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,277 | INFO     | sum of deviations: 43878590576.999985
[2026-04-03 09:31:14] 2026-04-03 07:30:16,277 | INFO     | mean x: 1775192755.5
[2026-04-03 09:31:14] 2026-04-03 07:30:16,277 | INFO     | mean y: 2332197.6363636362
[2026-04-03 09:31:14] 2026-04-03 07:30:16,277 | INFO     | intersect: -13650231541.434498
[2026-04-03 09:31:14] 2026-04-03 07:30:16,278 | INFO     | chi2: 1.3457332957228187
[2026-04-03 09:31:14] 2026-04-03 07:30:16,278 | INFO     | current chi2=1.3457332957228187 (change=-0.018208605774886876 %)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,278 | INFO     | right removable region: 263
[2026-04-03 09:31:14] 2026-04-03 07:30:16,278 | INFO     | sum of square deviations: 6035722470.0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,280 | INFO     | sum of deviations: -7851385884.000004
[2026-04-03 09:31:14] 2026-04-03 07:30:16,280 | INFO     | mean x: 1775193213.0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,281 | INFO     | mean y: 2341598.698884758
[2026-04-03 09:31:14] 2026-04-03 07:30:16,281 | INFO     | intersect: 2311547663.6226773
[2026-04-03 09:31:14] 2026-04-03 07:30:16,281 | INFO     | chi2: 0.7891167438255268
[2026-04-03 09:31:14] 2026-04-03 07:30:16,281 | INFO     | current chi2=0.7891167438255268 (change=62.66511248758356 %)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,282 | INFO     | sum of square deviations: 5705372090.0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,284 | INFO     | sum of deviations: -9815034779.5
[2026-04-03 09:31:14] 2026-04-03 07:30:16,284 | INFO     | mean x: 1775193365.5
[2026-04-03 09:31:14] 2026-04-03 07:30:16,284 | INFO     | mean y: 2342494.3068181816
[2026-04-03 09:31:14] 2026-04-03 07:30:16,284 | INFO     | intersect: 3056233519.79472
[2026-04-03 09:31:14] 2026-04-03 07:30:16,284 | INFO     | chi2: 0.7836045552867928
[2026-04-03 09:31:14] 2026-04-03 07:30:16,284 | INFO     | current chi2=0.7836045552867928 (change=0.6985263691163878 %)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,285 | INFO     | left removable region: 20
[2026-04-03 09:31:14] 2026-04-03 07:30:16,285 | INFO     | sum of square deviations: 4449281562.0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,287 | INFO     | sum of deviations: 6251926661.0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,287 | INFO     | mean x: 1775193335.0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,287 | INFO     | mean y: 2350049.2880658437
[2026-04-03 09:31:14] 2026-04-03 07:30:16,287 | INFO     | intersect: -2492070316.0814757
[2026-04-03 09:31:14] 2026-04-03 07:30:16,287 | INFO     | chi2: 0.0016450743048755333
[2026-04-03 09:31:14] 2026-04-03 07:30:16,288 | INFO     | current memory leak: 1.41 B/s (using 243 data points, chi2=0.00)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,288 | INFO     | could have reported an average CPU frequency of 2697 MHz (13 samples)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,288 | INFO     | ..............................
[2026-04-03 09:31:14] 2026-04-03 07:30:16,288 | INFO     | . Timing measurements:
[2026-04-03 09:31:14] 2026-04-03 07:30:16,288 | INFO     | . get job = 0 s
[2026-04-03 09:31:14] 2026-04-03 07:30:16,288 | INFO     | . initial setup = 8 s
[2026-04-03 09:31:14] 2026-04-03 07:30:16,289 | INFO     | . payload setup = 14 s
[2026-04-03 09:31:14] 2026-04-03 07:30:16,289 | INFO     | . stage-in = 0 s
[2026-04-03 09:31:14] 2026-04-03 07:30:16,289 | INFO     | . payload execution = 16683 s
[2026-04-03 09:31:14] 2026-04-03 07:30:16,289 | INFO     | . stage-out = 1 s
[2026-04-03 09:31:14] 2026-04-03 07:30:16,289 | INFO     | . log creation = 0 s
[2026-04-03 09:31:14] 2026-04-03 07:30:16,289 | INFO     | ..............................
[2026-04-03 09:31:14] 2026-04-03 07:30:16,305 | INFO     | time since job start (16716s) is within the limit (345600.0s)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,390 | INFO     | 
[2026-04-03 09:31:14] 2026-04-03 07:30:16,390 | INFO     | job summary report
[2026-04-03 09:31:14] 2026-04-03 07:30:16,390 | INFO     | --------------------------------------------------
[2026-04-03 09:31:14] 2026-04-03 07:30:16,390 | INFO     | PanDA job id: 7072015510
[2026-04-03 09:31:14] 2026-04-03 07:30:16,390 | INFO     | task id: 49191559
[2026-04-03 09:31:14] 2026-04-03 07:30:16,390 | INFO     | errors: (none)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,391 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 09:31:14] 2026-04-03 07:30:16,391 | INFO     | pilot state: finished 
[2026-04-03 09:31:14] 2026-04-03 07:30:16,391 | INFO     | transexitcode: 0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,391 | INFO     | exeerrorcode: 0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,391 | INFO     | exeerrordiag: 
[2026-04-03 09:31:14] 2026-04-03 07:30:16,391 | INFO     | exitcode: 0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,391 | INFO     | exitmsg: OK
[2026-04-03 09:31:14] 2026-04-03 07:30:16,391 | INFO     | cpuconsumptiontime: 63955 s
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | nevents: 400
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | neventsw: 0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | pid: 2997389
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | pgrp: 2997389
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | corecount: 4
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | event service: False
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | sizes: {0: 2280020, 1: 2280282, 11: 2280310, 16701: 2312842, 16702: 2312841, 16703: 2321919, 16704: 2322297}
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | --------------------------------------------------
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | 
[2026-04-03 09:31:14] 2026-04-03 07:30:16,392 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/0
[2026-04-03 09:31:14] 2026-04-03 07:30:16,424 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,424 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,424 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,424 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,426 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,426 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 09:31:14] 2026-04-03 07:30:16,426 | INFO     | job 7072015510 has completed (purged errors)
[2026-04-03 09:31:14] 2026-04-03 07:30:16,426 | INFO     | overall cleanup function is called
[2026-04-03 09:31:14] 2026-04-03 07:30:16,699 | INFO     | number of running child processes to parent process 2997389: 1
[2026-04-03 09:31:14] 2026-04-03 07:30:16,699 | INFO     | maximum number of monitored processes: 6
[2026-04-03 09:31:14] 2026-04-03 07:30:16,699 | INFO     | aborting job monitoring since job object (job id=7072015510) has expired
[2026-04-03 09:31:14] 2026-04-03 07:30:17,433 | INFO     | --- collectZombieJob: --- 10, [2997389]
[2026-04-03 09:31:14] 2026-04-03 07:30:17,433 | INFO     | zombie collector waiting for pid 2997389
[2026-04-03 09:31:14] 2026-04-03 07:30:17,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 09:31:14] 2026-04-03 07:30:17,434 | INFO     | collected zombie processes
[2026-04-03 09:31:14] 2026-04-03 07:30:17,434 | INFO     | will attempt to kill all subprocesses of pid=2997389
[2026-04-03 09:31:14] 2026-04-03 07:30:18,202 | INFO     | process IDs to be killed: [2997389] (in reverse order)
[2026-04-03 09:31:14] 2026-04-03 07:30:18,507 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 09:31:14] 2026-04-03 07:30:18,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 09:31:14] 2026-04-03 07:30:18,539 | INFO     | did not find any defunct processes belonging to 2997389
[2026-04-03 09:31:14] 2026-04-03 07:30:18,568 | INFO     | did not find any defunct processes belonging to 2997389
[2026-04-03 09:31:14] 2026-04-03 07:30:18,568 | INFO     | ready for new job
[2026-04-03 09:31:14] 2026-04-03 07:30:18,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 09:31:14] 2026-04-03 07:30:18,571 | INFO     | **************************************
[2026-04-03 09:31:14] 2026-04-03 07:30:18,571 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 09:31:14] 2026-04-03 07:30:18,571 | INFO     | **************************************
[2026-04-03 09:31:14] 2026-04-03 07:30:18,571 | INFO     | 
[2026-04-03 09:31:14] 2026-04-03 07:30:18,580 | INFO     | architecture information:
[2026-04-03 09:31:14] 2026-04-03 07:30:18,580 | INFO     | executing command: cat /etc/os-release
[2026-04-03 09:31:14] 2026-04-03 07:30:18,604 | INFO     | cat /etc/os-release:
[2026-04-03 09:31:14] NAME="CentOS Linux"
[2026-04-03 09:31:14] VERSION="7 (Core)"
[2026-04-03 09:31:14] ID="centos"
[2026-04-03 09:31:14] ID_LIKE="rhel fedora"
[2026-04-03 09:31:14] VERSION_ID="7"
[2026-04-03 09:31:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 09:31:14] ANSI_COLOR="0;31"
[2026-04-03 09:31:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 09:31:14] HOME_URL="https://www.centos.org/"
[2026-04-03 09:31:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 09:31:14] 
[2026-04-03 09:31:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 09:31:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 09:31:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 09:31:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 09:31:14] 
[2026-04-03 09:31:14] 2026-04-03 07:30:18,604 | INFO     | **************************************
[2026-04-03 09:31:14] 2026-04-03 07:30:19,106 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/0
[2026-04-03 09:31:14] 2026-04-03 07:30:19,132 | INFO     | sufficient remaining disk space (287945261056 B)
[2026-04-03 09:31:14] 2026-04-03 07:30:19,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 09:31:14] 2026-04-03 07:30:19,133 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 09:31:14] 2026-04-03 07:30:19,133 | INFO     | update_server=False
[2026-04-03 09:31:14] 2026-04-03 07:30:19,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 09:31:14] 2026-04-03 07:30:19,204 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-03 09:31:14] 2026-04-03 07:30:19,204 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-03 09:31:14] 2026-04-03 07:30:19,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 09:31:14] 2026-04-03 07:30:19,204 | INFO     | will abort loop
[2026-04-03 09:31:14] 2026-04-03 07:30:19,443 | INFO     | all payload control threads have been joined
[2026-04-03 09:31:14] 2026-04-03 07:30:19,646 | INFO     | all data control threads have been joined
[2026-04-03 09:31:14] 2026-04-03 07:30:20,138 | INFO     | [job] retrieve thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,208 | INFO     | [job] job monitor thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,269 | INFO     | [payload] failed_post thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,378 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,379 | INFO     | [job] validate thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,448 | INFO     | [payload] control thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 09:31:14] 2026-04-03 07:30:20,489 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,651 | INFO     | [data] control thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,704 | INFO     | all job control threads have been joined
[2026-04-03 09:31:14] 2026-04-03 07:30:20,860 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,978 | INFO     | [data] copytool_in thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:20,986 | INFO     | [payload] validate_post thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:21,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 09:31:14] 2026-04-03 07:30:21,709 | INFO     | [job] control thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:22,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 09:31:14] 2026-04-03 07:30:22,402 | INFO     | [job] queue monitor thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:22,468 | INFO     | [data] copytool_out thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:26,234 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:30,119 | INFO     | job.realtimelogging is not enabled
[2026-04-03 09:31:14] 2026-04-03 07:30:31,124 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 09:31:14] 2026-04-03 07:30:50,279 | INFO     | PID=2992110 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-03 09:31:14] 2026-04-03 07:30:50,279 | INFO     | .. there are 18 such processes running
[2026-04-03 09:31:14] 2026-04-03 07:30:50,280 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 09:31:14] 2026-04-03 07:30:50,280 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 09:31:14] 2026-04-03 07:30:50,280 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 09:31:14] 2026-04-03 07:31:07,349 | INFO     | [monitor] cgroup control has ended
[2026-04-03 09:31:14] 2026-04-03 07:31:08,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22820642277184)>', '<ExcThread(monitor, started 22820395677440)>']
[2026-04-03 09:31:14] 2026-04-03 07:31:09,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 09:31:14] 2026-04-03 07:31:09,359 | INFO     | [monitor] control thread has ended
[2026-04-03 09:31:14] 2026-04-03 07:31:13,482 | INFO     | all workflow threads have been joined
[2026-04-03 09:31:14] 2026-04-03 07:31:13,482 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 09:31:14] 2026-04-03 07:31:13,482 | INFO     | traces error code: 0
[2026-04-03 09:31:14] 2026-04-03 07:31:13,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 09:31:14] 2026-04-03 07:31:13,697 [wrapper] ==== pilot stdout END ====
[2026-04-03 09:31:14] 2026-04-03 07:31:13,701 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 09:31:14] 2026-04-03 07:31:13,705 [wrapper] pilotpid: 2992110
[2026-04-03 09:31:14] 2026-04-03 07:31:13,709 [wrapper] Pilot exit status: 0
[2026-04-03 09:31:14] 2026-04-03 07:31:13,724 [wrapper] pandaids: 7072015510
[2026-04-03 09:31:14] 2026-04-03 07:31:13,930 [wrapper] cleanup supervisor_pilot 3497356 2992111
[2026-04-03 09:31:14] 2026-04-03 07:31:13,934 [wrapper] Test setup, not cleaning
[2026-04-03 09:31:14] 2026-04-03 07:31:13,937 [wrapper] apfmon messages muted
[2026-04-03 09:31:14] 2026-04-03 07:31:13,940 [wrapper] ==== wrapper stdout END ====
[2026-04-03 09:31:14] 2026-04-03 07:31:13,942 [wrapper] ==== wrapper stderr END ====
[2026-04-03 09:31:14]  *** Error codes and diagnostics ***
[2026-04-03 09:31:14]     "exeErrorCode": 0,
[2026-04-03 09:31:14]     "exeErrorDiag": "",
[2026-04-03 09:31:14]     "pilotErrorCode": 0,
[2026-04-03 09:31:14]     "pilotErrorDiag": "",
[2026-04-03 09:31:14]  *** Listing of results directory ***
[2026-04-03 09:31:14] total 480508
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc    585013 Mar 28 15:05 pilot3.tar.gz
[2026-04-03 09:31:14] -rwx------. 1 boinc boinc     36322 Mar 28 15:05 runpilot2-wrapper.sh
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc      5118 Mar 28 15:06 queuedata.json
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc       100 Apr  3 04:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 09:31:14] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 04:51 run_atlas
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc       105 Apr  3 04:51 job.xml
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc      6624 Apr  3 04:51 init_data.xml
[2026-04-03 09:31:14] -rw-r--r--. 2 boinc boinc 257477337 Apr  3 04:51 EVNT.49127499._000001.pool.root.1
[2026-04-03 09:31:14] -rw-r--r--. 2 boinc boinc     15845 Apr  3 04:51 start_atlas.sh
[2026-04-03 09:31:14] drwxrwx--x. 2 boinc boinc      4096 Apr  3 04:51 shared
[2026-04-03 09:31:14] -rw-r--r--. 2 boinc boinc    597533 Apr  3 04:51 input.tar.gz
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc         0 Apr  3 04:51 boinc_lockfile
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc      2592 Apr  3 04:51 pandaJob.out
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc   1005191 Apr  3 04:51 agis_schedconf.cvmfs.json
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc       443 Apr  3 04:51 workernode_map.json
[2026-04-03 09:31:14] drwx------. 5 boinc boinc      4096 Apr  3 04:51 pilot3
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc 225146266 Apr  3 09:29 HITS.49191559._000056.pool.root.1
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc       531 Apr  3 09:29 boinc_task_state.xml
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc      1028 Apr  3 09:30 memory_monitor_summary.json
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc   1511579 Apr  3 09:30 agis_ddmendpoints.agis.ALL.json
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc    428084 Apr  3 09:30 log.49191559._000056.job.log.tgz.1
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc      6344 Apr  3 09:30 heartbeat.json
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc        95 Apr  3 09:30 pilot_heartbeat.json
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc      8192 Apr  3 09:30 boinc_mmap_file
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc        28 Apr  3 09:30 wrapper_checkpoint.txt
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc      5090 Apr  3 09:31 pilotlog.txt
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc   2313277 Apr  3 09:31 log.49191559._000056.job.log.1
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc       357 Apr  3 09:31 output.list
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc       620 Apr  3 09:31 runtime_log
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc   2754560 Apr  3 09:31 result.tar.gz
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc      9222 Apr  3 09:31 runtime_log.err
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc       666 Apr  3 09:31 UfOODmTTjQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmZBIKDmezmkIn.diag
[2026-04-03 09:31:14] -rw-r--r--. 1 boinc boinc     20828 Apr  3 09:31 stderr.txt
[2026-04-03 09:31:14] HITS file was successfully produced:
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc 225146266 Apr  3 09:29 shared/HITS.pool.root.1
[2026-04-03 09:31:14]  *** Contents of shared directory: ***
[2026-04-03 09:31:14] total 474616
[2026-04-03 09:31:14] -rw-r--r--. 2 boinc boinc 257477337 Apr  3 04:51 ATLAS.root_0
[2026-04-03 09:31:14] -rw-r--r--. 2 boinc boinc     15845 Apr  3 04:51 start_atlas.sh
[2026-04-03 09:31:14] -rw-r--r--. 2 boinc boinc    597533 Apr  3 04:51 input.tar.gz
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc 225146266 Apr  3 09:29 HITS.pool.root.1
[2026-04-03 09:31:14] -rw-------. 1 boinc boinc   2754560 Apr  3 09:31 result.tar.gz
09:31:15 (2988027): run_atlas exited; CPU time 65085.324064
09:31:15 (2988027): called boinc_finish(0)

</stderr_txt>
]]>

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