Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:44:45 (21248): wrapper (7.7.26015): starting
16:44:45 (21248): wrapper: running run_atlas (--nthreads 8)
[2026-03-29 16:44:45] Arguments: --nthreads 8
[2026-03-29 16:44:45] Threads: 8
[2026-03-29 16:44:45] Checking for CVMFS
[2026-03-29 16:44:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 16:44:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 16:44:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 16:44:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 16:44:48] 2.11.2.0 9107 149310 139120 157845 1 256 17739525 25165824 4388 130560 145 45212037 99.825 35779216 1174 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-29 16:44:48] CVMFS is ok
[2026-03-29 16:44:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 16:44:48] Checking for apptainer binary...
[2026-03-29 16:44:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-29 16:44:48] Running /usr/bin/apptainer --version
[2026-03-29 16:44:48] apptainer version 1.3.2-1.el7
[2026-03-29 16:44:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 16:44:55] cg-vwn398.simple-grid.lan
[2026-03-29 16:44:55] apptainer works
[2026-03-29 16:44:55] Set ATHENA_PROC_NUMBER=8
[2026-03-29 16:44:55] Set ATHENA_CORE_NUMBER=8
[2026-03-29 16:44:55] Starting ATLAS job with PandaID=7072047227
[2026-03-29 16:44:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 03:05:42]  *** The last 200 lines of the pilot log: ***
[2026-03-30 03:05:42] 2026-03-30 01:04:37,302 | INFO     | this job has now completed (state=finished)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,302 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,302 | INFO     | log transfer has been attempted: DONE
[2026-03-30 03:05:42] 2026-03-30 01:04:37,302 | INFO     | job 7072047227 has finished - writing final server update
[2026-03-30 03:05:42] 2026-03-30 01:04:37,302 | INFO     | total number of processed events: 400 (read)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,305 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7072047227/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,305 | INFO     | extracted standard info from prmon json
[2026-03-30 03:05:42] 2026-03-30 01:04:37,306 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 03:05:42] 2026-03-30 01:04:37,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 03:05:42] 2026-03-30 01:04:37,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 03:05:42] 2026-03-30 01:04:37,319 | INFO     | fitting pss+swap vs Time
[2026-03-30 03:05:42] 2026-03-30 01:04:37,320 | INFO     | sum of square deviations: 67313262100.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,337 | INFO     | sum of deviations: 293560080130.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,337 | INFO     | mean x (centered): 0.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,337 | INFO     | mean y: 2494808.955074875
[2026-03-30 03:05:42] 2026-03-30 01:04:37,337 | INFO     | intersect: 2494808.955074875
[2026-03-30 03:05:42] 2026-03-30 01:04:37,338 | INFO     | chi2: 6.030355013953996
[2026-03-30 03:05:42] 2026-03-30 01:04:37,340 | INFO     | sum of square deviations: 65647165745.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,350 | INFO     | sum of deviations: 331011320154.49994
[2026-03-30 03:05:42] 2026-03-30 01:04:37,350 | INFO     | mean x (centered): 0.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,351 | INFO     | mean y: 2498212.075503356
[2026-03-30 03:05:42] 2026-03-30 01:04:37,351 | INFO     | intersect: 2498212.075503356
[2026-03-30 03:05:42] 2026-03-30 01:04:37,352 | INFO     | chi2: 5.274711725163405
[2026-03-30 03:05:42] 2026-03-30 01:04:37,352 | INFO     | current chi2=5.274711725163405 (change=12.530660086214883 %)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,352 | INFO     | right removable region: 595
[2026-03-30 03:05:42] 2026-03-30 01:04:37,353 | INFO     | sum of square deviations: 65647165745.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,365 | INFO     | sum of deviations: 84934743606.00002
[2026-03-30 03:05:42] 2026-03-30 01:04:37,365 | INFO     | mean x (centered): 0.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,365 | INFO     | mean y: 2513896.124161074
[2026-03-30 03:05:42] 2026-03-30 01:04:37,365 | INFO     | intersect: 2513896.124161074
[2026-03-30 03:05:42] 2026-03-30 01:04:37,366 | INFO     | chi2: 1.6791877541861278
[2026-03-30 03:05:42] 2026-03-30 01:04:37,366 | INFO     | current chi2=1.6791877541861278 (change=72.15441296075346 %)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,367 | INFO     | sum of square deviations: 64008790840.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,379 | INFO     | sum of deviations: 7539490505.000008
[2026-03-30 03:05:42] 2026-03-30 01:04:37,380 | INFO     | mean x (centered): 0.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,380 | INFO     | mean y: 2521078.0964467004
[2026-03-30 03:05:42] 2026-03-30 01:04:37,380 | INFO     | intersect: 2521078.0964467004
[2026-03-30 03:05:42] 2026-03-30 01:04:37,381 | INFO     | chi2: 0.8419175338381928
[2026-03-30 03:05:42] 2026-03-30 01:04:37,381 | INFO     | current chi2=0.8419175338381928 (change=49.861620194684235 %)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,382 | INFO     | sum of square deviations: 62397904822.5
[2026-03-30 03:05:42] 2026-03-30 01:04:37,394 | INFO     | sum of deviations: 8639171299.000008
[2026-03-30 03:05:42] 2026-03-30 01:04:37,394 | INFO     | mean x (centered): 0.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,394 | INFO     | mean y: 2520968.815699659
[2026-03-30 03:05:42] 2026-03-30 01:04:37,394 | INFO     | intersect: 2520968.815699659
[2026-03-30 03:05:42] 2026-03-30 01:04:37,395 | INFO     | chi2: 0.8249768578744376
[2026-03-30 03:05:42] 2026-03-30 01:04:37,396 | INFO     | current chi2=0.8249768578744376 (change=2.012153837267743 %)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,396 | INFO     | left removable region: 15
[2026-03-30 03:05:42] 2026-03-30 01:04:37,397 | INFO     | sum of square deviations: 60500799485.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,408 | INFO     | sum of deviations: 47335279223.99999
[2026-03-30 03:05:42] 2026-03-30 01:04:37,408 | INFO     | mean x (centered): 0.0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,408 | INFO     | mean y: 2524668.872413793
[2026-03-30 03:05:42] 2026-03-30 01:04:37,409 | INFO     | intersect: 2524668.872413793
[2026-03-30 03:05:42] 2026-03-30 01:04:37,410 | INFO     | chi2: 0.04375041880949819
[2026-03-30 03:05:42] 2026-03-30 01:04:37,410 | INFO     | current memory leak: 0.78 B/s (using 580 data points, chi2=0.04)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,411 | INFO     | could have reported an average CPU frequency of 1999 MHz (24 samples)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,411 | INFO     | ..............................
[2026-03-30 03:05:42] 2026-03-30 01:04:37,411 | INFO     | . Timing measurements:
[2026-03-30 03:05:42] 2026-03-30 01:04:37,411 | INFO     | . get job = 0 s
[2026-03-30 03:05:42] 2026-03-30 01:04:37,411 | INFO     | . initial setup = 91 s
[2026-03-30 03:05:42] 2026-03-30 01:04:37,412 | INFO     | . payload setup = 126 s
[2026-03-30 03:05:42] 2026-03-30 01:04:37,412 | INFO     | . stage-in = 0 s
[2026-03-30 03:05:42] 2026-03-30 01:04:37,412 | INFO     | . payload execution = 36756 s
[2026-03-30 03:05:42] 2026-03-30 01:04:37,412 | INFO     | . stage-out = 3 s
[2026-03-30 03:05:42] 2026-03-30 01:04:37,412 | INFO     | . log creation = 1 s
[2026-03-30 03:05:42] 2026-03-30 01:04:37,412 | INFO     | ..............................
[2026-03-30 03:05:42] 2026-03-30 01:04:37,538 | INFO     | 
[2026-03-30 03:05:42] 2026-03-30 01:04:37,539 | INFO     | job summary report
[2026-03-30 03:05:42] 2026-03-30 01:04:37,539 | INFO     | --------------------------------------------------
[2026-03-30 03:05:42] 2026-03-30 01:04:37,539 | INFO     | PanDA job id: 7072047227
[2026-03-30 03:05:42] 2026-03-30 01:04:37,539 | INFO     | task id: 49176397
[2026-03-30 03:05:42] 2026-03-30 01:04:37,539 | INFO     | errors: (none)
[2026-03-30 03:05:42] 2026-03-30 01:04:37,539 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 03:05:42] 2026-03-30 01:04:37,539 | INFO     | pilot state: finished 
[2026-03-30 03:05:42] 2026-03-30 01:04:37,539 | INFO     | transexitcode: 0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,540 | INFO     | exeerrorcode: 0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,540 | INFO     | exeerrordiag: 
[2026-03-30 03:05:42] 2026-03-30 01:04:37,540 | INFO     | exitcode: 0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,540 | INFO     | exitmsg: OK
[2026-03-30 03:05:42] 2026-03-30 01:04:37,540 | INFO     | cpuconsumptiontime: 142267 s
[2026-03-30 03:05:42] 2026-03-30 01:04:37,540 | INFO     | nevents: 400
[2026-03-30 03:05:42] 2026-03-30 01:04:37,540 | INFO     | neventsw: 0
[2026-03-30 03:05:42] 2026-03-30 01:04:37,540 | INFO     | pid: 29595
[2026-03-30 03:05:42] 2026-03-30 01:04:37,540 | INFO     | pgrp: 29595
[2026-03-30 03:05:42] 2026-03-30 01:04:37,541 | INFO     | corecount: 8
[2026-03-30 03:05:42] 2026-03-30 01:04:37,541 | INFO     | event service: False
[2026-03-30 03:05:42] 2026-03-30 01:04:37,541 | INFO     | sizes: {0: 2279791, 1: 2280248, 2: 2281704, 12: 2281704, 36888: 2322264, 36891: 2331264, 36895: 2331448, 36897: 2331642}
[2026-03-30 03:05:42] 2026-03-30 01:04:37,541 | INFO     | --------------------------------------------------
[2026-03-30 03:05:42] 2026-03-30 01:04:37,541 | INFO     | 
[2026-03-30 03:05:42] 2026-03-30 01:04:37,541 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-30 03:05:42] 2026-03-30 01:04:38,116 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,116 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,117 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,117 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,118 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 03:05:42] 2026-03-30 01:04:38,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,119 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 03:05:42] 2026-03-30 01:04:38,119 | INFO     | job 7072047227 has completed (purged errors)
[2026-03-30 03:05:42] 2026-03-30 01:04:38,119 | INFO     | overall cleanup function is called
[2026-03-30 03:05:42] 2026-03-30 01:04:39,128 | INFO     | --- collectZombieJob: --- 10, [29595]
[2026-03-30 03:05:42] 2026-03-30 01:04:39,128 | INFO     | zombie collector waiting for pid 29595
[2026-03-30 03:05:42] 2026-03-30 01:04:39,128 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 03:05:42] 2026-03-30 01:04:39,129 | INFO     | collected zombie processes
[2026-03-30 03:05:42] 2026-03-30 01:04:39,129 | INFO     | will attempt to kill all subprocesses of pid=29595
[2026-03-30 03:05:42] 2026-03-30 01:04:39,281 | INFO     | process IDs to be killed: [29595] (in reverse order)
[2026-03-30 03:05:42] 2026-03-30 01:04:40,110 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 03:05:42] 2026-03-30 01:04:40,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 03:05:42] 2026-03-30 01:04:40,113 | INFO     | did not find any defunct processes belonging to 29595
[2026-03-30 03:05:42] 2026-03-30 01:04:40,117 | INFO     | did not find any defunct processes belonging to 29595
[2026-03-30 03:05:42] 2026-03-30 01:04:40,117 | INFO     | Ready for new job
[2026-03-30 03:05:42] 2026-03-30 01:04:40,120 | INFO     | **************************************
[2026-03-30 03:05:42] 2026-03-30 01:04:40,120 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-30 03:05:42] 2026-03-30 01:04:40,120 | INFO     | **************************************
[2026-03-30 03:05:42] 2026-03-30 01:04:40,120 | INFO     | 
[2026-03-30 03:05:42] 2026-03-30 01:04:40,121 | INFO     | pilot is running in a VM
[2026-03-30 03:05:42] 2026-03-30 01:04:40,121 | INFO     | architecture information:
[2026-03-30 03:05:42] 2026-03-30 01:04:40,127 | INFO     | executing command: cat /etc/os-release
[2026-03-30 03:05:42] 2026-03-30 01:04:40,505 | INFO     | cat /etc/os-release:
[2026-03-30 03:05:42] NAME="CentOS Linux"
[2026-03-30 03:05:42] VERSION="7 (Core)"
[2026-03-30 03:05:42] ID="centos"
[2026-03-30 03:05:42] ID_LIKE="rhel fedora"
[2026-03-30 03:05:42] VERSION_ID="7"
[2026-03-30 03:05:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 03:05:42] ANSI_COLOR="0;31"
[2026-03-30 03:05:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 03:05:42] HOME_URL="https://www.centos.org/"
[2026-03-30 03:05:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 03:05:42] 
[2026-03-30 03:05:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 03:05:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 03:05:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 03:05:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 03:05:42] 
[2026-03-30 03:05:42] 2026-03-30 01:04:40,505 | INFO     | **************************************
[2026-03-30 03:05:42] 2026-03-30 01:04:41,009 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-30 03:05:42] 2026-03-30 01:04:41,122 | INFO     | sufficient remaining disk space (496445161472 B)
[2026-03-30 03:05:42] 2026-03-30 01:04:41,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 03:05:42] 2026-03-30 01:04:41,123 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 03:05:42] 2026-03-30 01:04:41,123 | INFO     | update_server=False
[2026-03-30 03:05:42] 2026-03-30 01:04:41,123 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-30 03:05:42] 2026-03-30 01:04:41,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 03:05:42] 2026-03-30 01:04:41,123 | INFO     | aborting loop
[2026-03-30 03:05:42] 2026-03-30 01:04:41,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 03:05:42] 2026-03-30 01:04:41,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 03:05:42] 2026-03-30 01:04:41,659 | INFO     | all data control threads have been joined
[2026-03-30 03:05:42] 2026-03-30 01:04:41,702 | INFO     | all job control threads have been joined
[2026-03-30 03:05:42] 2026-03-30 01:04:41,896 | INFO     | all payload control threads have been joined
[2026-03-30 03:05:42] 2026-03-30 01:04:42,129 | INFO     | [job] retrieve thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:42,130 | INFO     | [job] job monitor thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:42,503 | INFO     | [payload] failed_post thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:42,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 03:05:42] 2026-03-30 01:04:42,567 | INFO     | [data] copytool_in thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:42,651 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:42,665 | INFO     | [data] control thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:42,712 | INFO     | [job] control thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:42,749 | INFO     | [payload] validate_post thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:42,902 | INFO     | [payload] control thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:43,054 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:43,130 | INFO     | [data] copytool_out thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:43,258 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:43,559 | INFO     | [job] validate thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:43,562 | INFO     | [job] queue monitor thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:43,563 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:04:45,561 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 03:05:42] 2026-03-30 01:05:11,275 | INFO     | PID=25047 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-30 03:05:42] 2026-03-30 01:05:11,275 | INFO     | .. there are 9 such processes running
[2026-03-30 03:05:42] 2026-03-30 01:05:11,276 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 03:05:42] 2026-03-30 01:05:11,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 03:05:42] 2026-03-30 01:05:11,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 03:05:42] 2026-03-30 01:05:32,022 | INFO     | [monitor] cgroup control has ended
[2026-03-30 03:05:42] 2026-03-30 01:05:32,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538561521472)>', '<ExcThread(monitor, started 140538258888448)>']
[2026-03-30 03:05:42] 2026-03-30 01:05:33,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 03:05:42] 2026-03-30 01:05:33,409 | INFO     | [monitor] control thread has ended
[2026-03-30 03:05:42] 2026-03-30 01:05:37,949 | INFO     | all workflow threads have been joined
[2026-03-30 03:05:42] 2026-03-30 01:05:37,949 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 03:05:42] 2026-03-30 01:05:37,950 | INFO     | traces error code: 0
[2026-03-30 03:05:42] 2026-03-30 01:05:37,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 03:05:42] 2026-03-30 01:05:38,354 [wrapper] ==== pilot stdout END ====
[2026-03-30 03:05:42] 2026-03-30 01:05:38,402 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 03:05:42] 2026-03-30 01:05:38,456 [wrapper] pilotpid: 25047
[2026-03-30 03:05:42] 2026-03-30 01:05:38,530 [wrapper] Pilot exit status: 0
[2026-03-30 03:05:42] 2026-03-30 01:05:38,892 [wrapper] pandaids: 7072047227
[2026-03-30 03:05:42] 2026-03-30 01:05:39,618 [wrapper] cleanup supervisor_pilot  9273 25048
[2026-03-30 03:05:42] 2026-03-30 01:05:39,707 [wrapper] Test setup, not cleaning
[2026-03-30 03:05:42] 2026-03-30 01:05:39,824 [wrapper] apfmon messages muted
[2026-03-30 03:05:42] 2026-03-30 01:05:39,869 [wrapper] ==== wrapper stdout END ====
[2026-03-30 03:05:42] 2026-03-30 01:05:39,971 [wrapper] ==== wrapper stderr END ====
[2026-03-30 03:05:42]  *** Error codes and diagnostics ***
[2026-03-30 03:05:42]     "exeErrorCode": 0,
[2026-03-30 03:05:42]     "pilotErrorCode": 0,
[2026-03-30 03:05:42]  *** Listing of results directory ***
[2026-03-30 03:05:42] total 490340
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc    661618 Mar 25 12:51 pilot3.tar.gz
[2026-03-30 03:05:42] -rwx------. 1 boinc boinc     36322 Mar 28 15:05 runpilot2-wrapper.sh
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc      5118 Mar 28 15:05 queuedata.json
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc       100 Mar 29 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 03:05:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar 29 16:44 run_atlas
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc       105 Mar 29 16:44 job.xml
[2026-03-30 03:05:42] -rw-r--r--. 2 boinc boinc 247068875 Mar 29 16:44 EVNT.49133815._000026.pool.root.1
[2026-03-30 03:05:42] -rw-r--r--. 2 boinc boinc    673989 Mar 29 16:44 input.tar.gz
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc      6391 Mar 29 16:44 init_data.xml
[2026-03-30 03:05:42] -rw-r--r--. 2 boinc boinc     15845 Mar 29 16:44 start_atlas.sh
[2026-03-30 03:05:42] drwxrwx--x. 2 boinc boinc        68 Mar 29 16:44 shared
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc         0 Mar 29 16:44 boinc_lockfile
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc      2624 Mar 29 16:44 pandaJob.out
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc       415 Mar 29 16:49 workernode_map.json
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc   1003389 Mar 29 16:49 agis_schedconf.cvmfs.json
[2026-03-30 03:05:42] drwx------. 7 boinc boinc      4096 Mar 29 16:49 pilot3
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc 243082136 Mar 30 03:03 HITS.49176397._001448.pool.root.1
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc       532 Mar 30 03:03 boinc_task_state.xml
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc      1016 Mar 30 03:04 memory_monitor_summary.json
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc   1511579 Mar 30 03:04 agis_ddmendpoints.agis.ALL.json
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc    603907 Mar 30 03:04 log.49176397._001448.job.log.tgz.1
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc      6331 Mar 30 03:04 heartbeat_new.json
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc      6222 Mar 30 03:04 heartbeat.json
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc        95 Mar 30 03:05 pilot_heartbeat.json
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc      8192 Mar 30 03:05 boinc_mmap_file
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc        29 Mar 30 03:05 wrapper_checkpoint.txt
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc      4880 Mar 30 03:05 pilotlog.txt
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc   3331065 Mar 30 03:05 log.49176397._001448.job.log.1
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc       357 Mar 30 03:05 output.list
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc       620 Mar 30 03:05 runtime_log
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc   3952640 Mar 30 03:05 result.tar.gz
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc       658 Mar 30 03:05 Wo5KDmDTjQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmWXKKDmxq7JBn.diag
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc      8832 Mar 30 03:05 runtime_log.err
[2026-03-30 03:05:42] -rw-r--r--. 1 boinc boinc     20651 Mar 30 03:05 stderr.txt
[2026-03-30 03:05:42] HITS file was successfully produced:
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc 243082136 Mar 30 03:03 shared/HITS.pool.root.1
[2026-03-30 03:05:42]  *** Contents of shared directory: ***
[2026-03-30 03:05:42] total 483204
[2026-03-30 03:05:42] -rw-r--r--. 2 boinc boinc 247068875 Mar 29 16:44 ATLAS.root_0
[2026-03-30 03:05:42] -rw-r--r--. 2 boinc boinc    673989 Mar 29 16:44 input.tar.gz
[2026-03-30 03:05:42] -rw-r--r--. 2 boinc boinc     15845 Mar 29 16:44 start_atlas.sh
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc 243082136 Mar 30 03:03 HITS.pool.root.1
[2026-03-30 03:05:42] -rw-------. 1 boinc boinc   3952640 Mar 30 03:05 result.tar.gz
03:05:44 (21248): run_atlas exited; CPU time 142903.148637
03:05:44 (21248): called boinc_finish(0)

</stderr_txt>
]]>

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