Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
09:19:03 (1415668): wrapper (7.7.26015): starting
09:19:03 (1415668): wrapper: running run_atlas (--nthreads 4)
[2026-03-28 09:19:03] Arguments: --nthreads 4
[2026-03-28 09:19:03] Threads: 4
[2026-03-28 09:19:03] Checking for CVMFS
[2026-03-28 09:19:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 09:19:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 09:19:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 09:19:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 09:19:04] 2.13.3.0 809741 3030 55684 157801 2 9 3351643 4096001 2748 130560 0 1511409 99.984 115729 767 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-28 09:19:04] CVMFS is ok
[2026-03-28 09:19:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-28 09:19:04] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-28 09:19:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-28 09:19:04] Further information can be found at the LHC@home message board.
[2026-03-28 09:19:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 09:19:04] Checking for apptainer binary...
[2026-03-28 09:19:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-28 09:19:04] Running /usr/bin/apptainer --version
[2026-03-28 09:19:04] apptainer version 1.4.5
[2026-03-28 09:19:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 09:19:04] T3500-Ubuntu
[2026-03-28 09:19:04] apptainer works
[2026-03-28 09:19:04] Set ATHENA_PROC_NUMBER=4
[2026-03-28 09:19:04] Set ATHENA_CORE_NUMBER=4
[2026-03-28 09:19:04] Starting ATLAS job with PandaID=7071936023
[2026-03-28 09:19:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:26:12 (1481485): wrapper (7.7.26015): starting
11:26:12 (1481485): wrapper: running run_atlas (--nthreads 4)
[2026-03-28 11:26:12] Arguments: --nthreads 4
[2026-03-28 11:26:12] Threads: 4
[2026-03-28 11:26:12] This job has been restarted, cleaning up previous attempt
[2026-03-28 11:26:12] Checking for CVMFS
[2026-03-28 11:26:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 11:26:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 11:26:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 11:26:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 11:26:14] 2.13.3.0 809741 3157 56168 157804 3 51 3368179 4096000 0 130560 0 1742016 99.985 120201 768 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-28 11:26:14] CVMFS is ok
[2026-03-28 11:26:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-28 11:26:14] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-28 11:26:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-28 11:26:14] Further information can be found at the LHC@home message board.
[2026-03-28 11:26:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 11:26:14] Checking for apptainer binary...
[2026-03-28 11:26:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-28 11:26:14] Running /usr/bin/apptainer --version
[2026-03-28 11:26:14] apptainer version 1.4.5
[2026-03-28 11:26:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 11:26:14] T3500-Ubuntu
[2026-03-28 11:26:14] apptainer works
[2026-03-28 11:26:14] Set ATHENA_PROC_NUMBER=4
[2026-03-28 11:26:14] Set ATHENA_CORE_NUMBER=4
[2026-03-28 11:26:14] Starting ATLAS job with PandaID=7071936023
[2026-03-28 11:26:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 00:43:50]  *** The last 200 lines of the pilot log: ***
[2026-03-29 00:43:50] 2026-03-29 04:43:16,892 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/5/workernode_map.json
[2026-03-29 00:43:50] 2026-03-29 04:43:16,892 | INFO     | this job has now completed (state=finished)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,893 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,893 | INFO     | log transfer has been attempted: DONE
[2026-03-29 00:43:50] 2026-03-29 04:43:16,893 | INFO     | job 7071936023 has finished - writing final server update
[2026-03-29 00:43:50] 2026-03-29 04:43:16,893 | INFO     | total number of processed events: 700 (read)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,899 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7071936023/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,899 | INFO     | extracted standard info from prmon json
[2026-03-29 00:43:50] 2026-03-29 04:43:16,899 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 00:43:50] 2026-03-29 04:43:16,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 00:43:50] 2026-03-29 04:43:16,909 | INFO     | fitting pss+swap vs Time
[2026-03-29 00:43:50] 2026-03-29 04:43:16,910 | INFO     | sum of square deviations: 149425908660.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,921 | INFO     | sum of deviations: 284422418661.0001
[2026-03-29 00:43:50] 2026-03-29 04:43:16,922 | INFO     | mean x: 1774735494.5
[2026-03-29 00:43:50] 2026-03-29 04:43:16,922 | INFO     | mean y: 2337556.272959184
[2026-03-29 00:43:50] 2026-03-29 04:43:16,922 | INFO     | intersect: -3375755080.779478
[2026-03-29 00:43:50] 2026-03-29 04:43:16,923 | INFO     | chi2: 4.2988202811290135
[2026-03-29 00:43:50] 2026-03-29 04:43:16,924 | INFO     | sum of square deviations: 146585185630.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,935 | INFO     | sum of deviations: 463151184143.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,936 | INFO     | mean x: 1774735342.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,936 | INFO     | mean y: 2347142.138639281
[2026-03-29 00:43:50] 2026-03-29 04:43:16,936 | INFO     | intersect: -5605114291.6688175
[2026-03-29 00:43:50] 2026-03-29 04:43:16,937 | INFO     | chi2: 1.9145563495679525
[2026-03-29 00:43:50] 2026-03-29 04:43:16,937 | INFO     | current chi2=1.9145563495679525 (change=55.463214920324 %)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,937 | INFO     | sum of square deviations: 143780695837.5
[2026-03-29 00:43:50] 2026-03-29 04:43:16,949 | INFO     | sum of deviations: 465851675248.99994
[2026-03-29 00:43:50] 2026-03-29 04:43:16,949 | INFO     | mean x: 1774735189.5
[2026-03-29 00:43:50] 2026-03-29 04:43:16,949 | INFO     | mean y: 2347286.723514212
[2026-03-29 00:43:50] 2026-03-29 04:43:16,949 | INFO     | intersect: -5747822138.567965
[2026-03-29 00:43:50] 2026-03-29 04:43:16,950 | INFO     | chi2: 1.8920527354942165
[2026-03-29 00:43:50] 2026-03-29 04:43:16,950 | INFO     | current chi2=1.8920527354942165 (change=1.1753957557224308 %)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,950 | INFO     | right removable region: 773
[2026-03-29 00:43:50] 2026-03-29 04:43:16,951 | INFO     | sum of square deviations: 146585185630.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,963 | INFO     | sum of deviations: 141501523527.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,963 | INFO     | mean x: 1774735647.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,963 | INFO     | mean y: 2345212.059050064
[2026-03-29 00:43:50] 2026-03-29 04:43:16,963 | INFO     | intersect: -1710841538.8999124
[2026-03-29 00:43:50] 2026-03-29 04:43:16,964 | INFO     | chi2: 2.530699709386135
[2026-03-29 00:43:50] 2026-03-29 04:43:16,964 | INFO     | current chi2=2.530699709386135 (change=41.130367312738905 %)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,965 | INFO     | sum of square deviations: 143780695837.5
[2026-03-29 00:43:50] 2026-03-29 04:43:16,976 | INFO     | sum of deviations: 131680689172.5
[2026-03-29 00:43:50] 2026-03-29 04:43:16,976 | INFO     | mean x: 1774735799.5
[2026-03-29 00:43:50] 2026-03-29 04:43:16,976 | INFO     | mean y: 2345745.3682170543
[2026-03-29 00:43:50] 2026-03-29 04:43:16,976 | INFO     | intersect: -1623035407.6162713
[2026-03-29 00:43:50] 2026-03-29 04:43:16,977 | INFO     | chi2: 2.5278341864296747
[2026-03-29 00:43:50] 2026-03-29 04:43:16,977 | INFO     | current chi2=2.5278341864296747 (change=0.11323046135550138 %)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,977 | INFO     | left removable region: 20
[2026-03-29 00:43:50] 2026-03-29 04:43:16,978 | INFO     | sum of square deviations: 132392257192.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,990 | INFO     | sum of deviations: 308866799699.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,990 | INFO     | mean x: 1774735769.0
[2026-03-29 00:43:50] 2026-03-29 04:43:16,990 | INFO     | mean y: 2355836.8114209827
[2026-03-29 00:43:50] 2026-03-29 04:43:16,990 | INFO     | intersect: -4138044583.187589
[2026-03-29 00:43:50] 2026-03-29 04:43:16,991 | INFO     | chi2: 0.1012635787920861
[2026-03-29 00:43:50] 2026-03-29 04:43:16,991 | INFO     | current memory leak: 2.33 B/s (using 753 data points, chi2=0.10)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | could have reported an average CPU frequency of 3199 MHz (30 samples)
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | ..............................
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | . Timing measurements:
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | . get job = 0 s
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | . initial setup = 1 s
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | . payload setup = 10 s
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | . stage-in = 0 s
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | . payload execution = 47775 s
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | . stage-out = 3 s
[2026-03-29 00:43:50] 2026-03-29 04:43:16,992 | INFO     | . log creation = 0 s
[2026-03-29 00:43:50] 2026-03-29 04:43:16,993 | INFO     | ..............................
[2026-03-29 00:43:50] 2026-03-29 04:43:17,069 | INFO     | 
[2026-03-29 00:43:50] 2026-03-29 04:43:17,069 | INFO     | job summary report
[2026-03-29 00:43:50] 2026-03-29 04:43:17,069 | INFO     | --------------------------------------------------
[2026-03-29 00:43:50] 2026-03-29 04:43:17,069 | INFO     | PanDA job id: 7071936023
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | task id: 49146883
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | errors: (none)
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | pilot state: finished 
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | transexitcode: 0
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | exeerrorcode: 0
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | exeerrordiag: 
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | exitcode: 0
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | exitmsg: OK
[2026-03-29 00:43:50] 2026-03-29 04:43:17,070 | INFO     | cpuconsumptiontime: 190253 s
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | nevents: 700
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | neventsw: 0
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | pid: 1513977
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | pgrp: 1513977
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | corecount: 4
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | event service: False
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | sizes: {0: 2280878, 11: 2280878, 47788: 2327885, 47789: 2327884, 47793: 2336962, 47796: 2337018, 47798: 2337392}
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | --------------------------------------------------
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | 
[2026-03-29 00:43:50] 2026-03-29 04:43:17,071 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/5
[2026-03-29 00:43:50] 2026-03-29 04:43:17,105 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,105 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,107 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 00:43:50] 2026-03-29 04:43:17,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,107 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 00:43:50] 2026-03-29 04:43:17,107 | INFO     | job 7071936023 has completed (purged errors)
[2026-03-29 00:43:50] 2026-03-29 04:43:17,107 | INFO     | overall cleanup function is called
[2026-03-29 00:43:50] 2026-03-29 04:43:18,118 | INFO     | --- collectZombieJob: --- 10, [1513977]
[2026-03-29 00:43:50] 2026-03-29 04:43:18,118 | INFO     | zombie collector waiting for pid 1513977
[2026-03-29 00:43:50] 2026-03-29 04:43:18,118 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 00:43:50] 2026-03-29 04:43:18,118 | INFO     | collected zombie processes
[2026-03-29 00:43:50] 2026-03-29 04:43:18,118 | INFO     | will attempt to kill all subprocesses of pid=1513977
[2026-03-29 00:43:50] 2026-03-29 04:43:18,310 | INFO     | process IDs to be killed: [1513977] (in reverse order)
[2026-03-29 00:43:50] 2026-03-29 04:43:18,382 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 00:43:50] 2026-03-29 04:43:18,383 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 00:43:50] 2026-03-29 04:43:18,388 | INFO     | did not find any defunct processes belonging to 1513977
[2026-03-29 00:43:50] 2026-03-29 04:43:18,394 | INFO     | did not find any defunct processes belonging to 1513977
[2026-03-29 00:43:50] 2026-03-29 04:43:18,394 | INFO     | ready for new job
[2026-03-29 00:43:50] 2026-03-29 04:43:18,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 00:43:50] 2026-03-29 04:43:18,398 | INFO     | **************************************
[2026-03-29 00:43:50] 2026-03-29 04:43:18,398 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 00:43:50] 2026-03-29 04:43:18,398 | INFO     | **************************************
[2026-03-29 00:43:50] 2026-03-29 04:43:18,398 | INFO     | 
[2026-03-29 00:43:50] 2026-03-29 04:43:18,400 | INFO     | architecture information:
[2026-03-29 00:43:50] 2026-03-29 04:43:18,401 | INFO     | executing command: cat /etc/os-release
[2026-03-29 00:43:50] 2026-03-29 04:43:18,424 | INFO     | cat /etc/os-release:
[2026-03-29 00:43:50] NAME="CentOS Linux"
[2026-03-29 00:43:50] VERSION="7 (Core)"
[2026-03-29 00:43:50] ID="centos"
[2026-03-29 00:43:50] ID_LIKE="rhel fedora"
[2026-03-29 00:43:50] VERSION_ID="7"
[2026-03-29 00:43:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 00:43:50] ANSI_COLOR="0;31"
[2026-03-29 00:43:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 00:43:50] HOME_URL="https://www.centos.org/"
[2026-03-29 00:43:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 00:43:50] 
[2026-03-29 00:43:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 00:43:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 00:43:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 00:43:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 00:43:50] 
[2026-03-29 00:43:50] 2026-03-29 04:43:18,424 | INFO     | **************************************
[2026-03-29 00:43:50] 2026-03-29 04:43:18,927 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/5
[2026-03-29 00:43:50] 2026-03-29 04:43:18,950 | INFO     | sufficient remaining disk space (405914255360 B)
[2026-03-29 00:43:50] 2026-03-29 04:43:18,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 00:43:50] 2026-03-29 04:43:18,950 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 00:43:50] 2026-03-29 04:43:18,951 | INFO     | update_server=False
[2026-03-29 00:43:50] 2026-03-29 04:43:18,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 00:43:50] 2026-03-29 04:43:18,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 00:43:50] 2026-03-29 04:43:19,087 | INFO     | all data control threads have been joined
[2026-03-29 00:43:50] 2026-03-29 04:43:19,374 | INFO     | all job control threads have been joined
[2026-03-29 00:43:50] 2026-03-29 04:43:19,424 | INFO     | all payload control threads have been joined
[2026-03-29 00:43:50] 2026-03-29 04:43:19,506 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 00:43:50] 2026-03-29 04:43:19,506 | INFO     | aborting loop
[2026-03-29 00:43:50] 2026-03-29 04:43:19,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 00:43:50] 2026-03-29 04:43:19,956 | INFO     | [job] retrieve thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:19,957 | INFO     | [job] queue monitor thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,093 | INFO     | [data] control thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,334 | INFO     | [job] validate thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,379 | INFO     | [job] control thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,429 | INFO     | [payload] control thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,437 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,438 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,467 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,511 | INFO     | [job] job monitor thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,829 | INFO     | [data] copytool_in thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:20,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 00:43:50] 2026-03-29 04:43:21,161 | INFO     | [payload] failed_post thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:21,337 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:21,552 | INFO     | [payload] validate_post thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:21,594 | INFO     | [data] copytool_out thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:24,922 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 00:43:50] 2026-03-29 04:43:43,893 | INFO     | [monitor] cgroup control has ended
[2026-03-29 00:43:50] 2026-03-29 04:43:45,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130430239762240)>', '<ExcThread(monitor, started 130429734598400)>']
[2026-03-29 00:43:50] 2026-03-29 04:43:50,087 | INFO     | PID=1497274 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-29 00:43:50] 2026-03-29 04:43:50,094 | INFO     | .. there are 4 such processes running
[2026-03-29 00:43:50] 2026-03-29 04:43:50,095 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 00:43:50] 2026-03-29 04:43:50,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 00:43:50] 2026-03-29 04:43:50,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 00:43:50] 2026-03-29 04:43:50,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 00:43:50] 2026-03-29 04:43:50,095 | INFO     | [monitor] control thread has ended
[2026-03-29 00:43:50] 2026-03-29 04:43:50,119 | INFO     | all workflow threads have been joined
[2026-03-29 00:43:50] 2026-03-29 04:43:50,119 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 00:43:50] 2026-03-29 04:43:50,120 | INFO     | traces error code: 0
[2026-03-29 00:43:50] 2026-03-29 04:43:50,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 00:43:50] 2026-03-29 04:43:50,278 [wrapper] ==== pilot stdout END ====
[2026-03-29 00:43:50] 2026-03-29 04:43:50,282 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 00:43:50] 2026-03-29 04:43:50,286 [wrapper] pilotpid: 1497274
[2026-03-29 00:43:50] 2026-03-29 04:43:50,289 [wrapper] Pilot exit status: 0
[2026-03-29 00:43:50] 2026-03-29 04:43:50,302 [wrapper] pandaids: 7071936023 7071936023
[2026-03-29 00:43:50] 2026-03-29 04:43:50,346 [wrapper] cleanup supervisor_pilot 1734786 1497275
[2026-03-29 00:43:50] 2026-03-29 04:43:50,351 [wrapper] Test setup, not cleaning
[2026-03-29 00:43:50] 2026-03-29 04:43:50,355 [wrapper] apfmon messages muted
[2026-03-29 00:43:50] 2026-03-29 04:43:50,358 [wrapper] ==== wrapper stdout END ====
[2026-03-29 00:43:50] 2026-03-29 04:43:50,362 [wrapper] ==== wrapper stderr END ====
[2026-03-29 00:43:50]  *** Error codes and diagnostics ***
[2026-03-29 00:43:50]     "exeErrorCode": 0,
[2026-03-29 00:43:50]     "exeErrorDiag": "",
[2026-03-29 00:43:50]     "pilotErrorCode": 0,
[2026-03-29 00:43:50]     "pilotErrorDiag": "",
[2026-03-29 00:43:50]  *** Listing of results directory ***
[2026-03-29 00:43:50] total 1256536
[2026-03-29 00:43:50] drwx------ 5 whitlerd whitlerd      4096 Mar 10 12:00 pilot3
[2026-03-29 00:43:50] -rwx------ 1 whitlerd whitlerd     36322 Mar 28 03:47 runpilot2-wrapper.sh
[2026-03-29 00:43:50] -rw-r--r-- 1 whitlerd whitlerd      5118 Mar 28 03:47 queuedata.json
[2026-03-29 00:43:50] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 28 03:47 pilot3.tar.gz
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 28 09:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 00:43:50] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 28 09:19 run_atlas
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 28 09:19 job.xml
[2026-03-29 00:43:50] -rw-r--r-- 3 whitlerd whitlerd 330233871 Mar 28 09:19 EVNT.49146874._000001.pool.root.1
[2026-03-29 00:43:50] -rw-r--r-- 3 whitlerd whitlerd 330233871 Mar 28 09:19 ATLAS.root_0
[2026-03-29 00:43:50] -rw-r--r-- 2 whitlerd whitlerd    597717 Mar 28 09:19 input.tar.gz
[2026-03-29 00:43:50] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 28 09:19 start_atlas.sh
[2026-03-29 00:43:50] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 28 09:19 shared
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 28 09:19 boinc_setup_complete
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 28 09:19 boinc_lockfile
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd      2933 Mar 28 11:26 pandaJob.out
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd   1003337 Mar 28 11:26 agis_schedconf.cvmfs.json
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd       437 Mar 28 11:26 workernode_map.json
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd      9213 Mar 28 11:26 init_data.xml
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd       532 Mar 29 00:37 boinc_task_state.xml
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd 605662510 Mar 29 00:42 HITS.49146883._000017.pool.root.1
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd      1050 Mar 29 00:43 memory_monitor_summary.json
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd   1511579 Mar 29 00:43 agis_ddmendpoints.agis.ALL.json
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd   1504099 Mar 29 00:43 log.49146883._000017.job.log.tgz.1
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd      6989 Mar 29 00:43 heartbeat.json
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 29 00:43 boinc_mmap_file
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd        29 Mar 29 00:43 wrapper_checkpoint.txt
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd        96 Mar 29 00:43 pilot_heartbeat.json
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd      4834 Mar 29 00:43 pilotlog.txt
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd   6804353 Mar 29 00:43 log.49146883._000017.job.log.1
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd       353 Mar 29 00:43 output.list
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 29 00:43 runtime_log
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd   8325120 Mar 29 00:43 result.tar.gz
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd      9105 Mar 29 00:43 runtime_log.err
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd       786 Mar 29 00:43 AGDLDm9YdQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmlsJKDmLSPxZn.diag
[2026-03-29 00:43:50] -rw-rw-r-- 1 whitlerd whitlerd     23460 Mar 29 00:43 stderr.txt
[2026-03-29 00:43:50] HITS file was successfully produced:
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd 605662510 Mar 29 00:42 shared/HITS.pool.root.1
[2026-03-29 00:43:50]  *** Contents of shared directory: ***
[2026-03-29 00:43:50] total 922704
[2026-03-29 00:43:50] -rw-r--r-- 3 whitlerd whitlerd 330233871 Mar 28 09:19 ATLAS.root_0
[2026-03-29 00:43:50] -rw-r--r-- 2 whitlerd whitlerd    597717 Mar 28 09:19 input.tar.gz
[2026-03-29 00:43:50] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 28 09:19 start_atlas.sh
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd 605662510 Mar 29 00:42 HITS.pool.root.1
[2026-03-29 00:43:50] -rw------- 1 whitlerd whitlerd   8325120 Mar 29 00:43 result.tar.gz
00:43:51 (1481485): run_atlas exited; CPU time 190959.571555
00:43:51 (1481485): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN