Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:15 (2746357): wrapper (7.7.26015): starting
19:12:15 (2746357): wrapper: running run_atlas (--nthreads 12)
[2026-03-31 19:12:15] Arguments: --nthreads 12
[2026-03-31 19:12:15] Threads: 12
[2026-03-31 19:12:15] Checking for CVMFS
[2026-03-31 19:12:15] No cvmfs_config command found, will try listing directly
[2026-03-31 19:12:15] CVMFS is ok
[2026-03-31 19:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 19:12:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 19:12:15] Further information can be found at the LHC@home message board.
[2026-03-31 19:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 19:12:15] Checking for apptainer binary...
[2026-03-31 19:12:15] which: no apptainer in ((null))
[2026-03-31 19:12:15] apptainer is not installed, using version from CVMFS
[2026-03-31 19:12:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 19:12:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-31 19:12:15] apptainer works
[2026-03-31 19:12:15] Set ATHENA_PROC_NUMBER=12
[2026-03-31 19:12:15] Set ATHENA_CORE_NUMBER=12
[2026-03-31 19:12:15] Starting ATLAS job with PandaID=7071936481
[2026-03-31 19:12:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 20:08:37]  *** The last 200 lines of the pilot log: ***
[2026-03-31 20:08:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 20:08:37]  replicas=None
[2026-03-31 20:08:37]  scope=mc23_13p6TeV
[2026-03-31 20:08:37]  status=None
[2026-03-31 20:08:37]  status_code=0
[2026-03-31 20:08:37]  storage_token=
[2026-03-31 20:08:37]  surl=/var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7071936481/log.49180840._000229.job.log.tgz.1
[2026-03-31 20:08:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/51/log.49180840._000229.job.log.tgz.1
[2026-03-31 20:08:37]  workdir=None
[2026-03-31 20:08:37] ]
[2026-03-31 20:08:37] 2026-03-31 18:07:44,315 | INFO     | transferring file log.49180840._000229.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7071936481/log.49180840._000229.job.log.tgz.1 to /var/lib/
[2026-03-31 20:08:37] 2026-03-31 18:07:44,316 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7071936481/log.49180840._000229.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/10/
[2026-03-31 20:08:37] 2026-03-31 18:07:44,331 | INFO     | adding to output.list: log.49180840._000229.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/51/log.49180840._000229.job.log.tg
[2026-03-31 20:08:37] 2026-03-31 18:07:44,332 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 20:08:37] 2026-03-31 18:07:44,332 | INFO     | summary of transferred files:
[2026-03-31 20:08:37] 2026-03-31 18:07:44,332 | INFO     |  -- lfn=log.49180840._000229.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 20:08:37] 2026-03-31 18:07:44,332 | INFO     | stage-out finished correctly
[2026-03-31 20:08:37] 2026-03-31 18:07:45,880 | INFO     | time since job start (3320s) is within the limit (345600.0s)
[2026-03-31 20:08:37] 2026-03-31 18:07:46,138 | WARNING  | process 2776962 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 20:08:37] 2026-03-31 18:07:46,138 | INFO     | using path: /var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7071936481/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 20:08:37] 2026-03-31 18:07:46,477 | INFO     | number of running child processes to parent process 2776962: 1
[2026-03-31 20:08:37] 2026-03-31 18:07:46,477 | INFO     | maximum number of monitored processes: 6
[2026-03-31 20:08:37] 2026-03-31 18:07:47,561 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 20:08:37] 2026-03-31 18:07:47,885 | INFO     | time since job start (3322s) is within the limit (345600.0s)
[2026-03-31 20:08:37] 2026-03-31 18:07:47,886 | INFO     | 3326s have passed since pilot start - server update state is 'RUNNING'
[2026-03-31 20:08:37] 2026-03-31 18:07:48,981 | INFO     | monitor loop #247: job 0:7071936481 is in state 'finished'
[2026-03-31 20:08:37] 2026-03-31 18:07:48,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,198 | INFO     | job 7071936481 has state=finished
[2026-03-31 20:08:37] 2026-03-31 18:07:49,198 | INFO     | preparing for final server update for job 7071936481 in state='finished'
[2026-03-31 20:08:37] 2026-03-31 18:07:49,199 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7071936481/jobReport.json
[2026-03-31 20:08:37] 2026-03-31 18:07:49,200 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/10/workernode_map.json
[2026-03-31 20:08:37] 2026-03-31 18:07:49,200 | INFO     | this job has now completed (state=finished)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,200 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,200 | INFO     | log transfer has been attempted: DONE
[2026-03-31 20:08:37] 2026-03-31 18:07:49,200 | INFO     | job 7071936481 has finished - writing final server update
[2026-03-31 20:08:37] 2026-03-31 18:07:49,200 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2601766/.job.ad'
[2026-03-31 20:08:37] 2026-03-31 18:07:49,200 | INFO     | total number of processed events: 400 (read)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,218 | INFO     | using path: /var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7071936481/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,218 | INFO     | extracted standard info from prmon json
[2026-03-31 20:08:37] 2026-03-31 18:07:49,218 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 20:08:37] 2026-03-31 18:07:49,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-31 20:08:37] 2026-03-31 18:07:49,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 20:08:37] 2026-03-31 18:07:49,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 20:08:37] 2026-03-31 18:07:49,219 | INFO     | fitting pss+swap vs Time
[2026-03-31 20:08:37] 2026-03-31 18:07:49,219 | INFO     | sum of square deviations: 32179208.0
[2026-03-31 20:08:37] 2026-03-31 18:07:49,219 | INFO     | sum of deviations: 538204037.0
[2026-03-31 20:08:37] 2026-03-31 18:07:49,219 | INFO     | mean x: 1774978875.0
[2026-03-31 20:08:37] 2026-03-31 18:07:49,219 | INFO     | mean y: 2701220.8936170214
[2026-03-31 20:08:37] 2026-03-31 18:07:49,219 | INFO     | intersect: -29684194619.262497
[2026-03-31 20:08:37] 2026-03-31 18:07:49,219 | INFO     | chi2: 0.0004052815185700309
[2026-03-31 20:08:37] 2026-03-31 18:07:49,219 | INFO     | current memory leak: 16.73 B/s (using 47 data points, chi2=0.00)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | could have reported an average CPU frequency of 3657 MHz (5 samples)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | ..............................
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | . Timing measurements:
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | . get job = 0 s
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | . initial setup = 4 s
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | . payload setup = 6 s
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | . stage-in = 0 s
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | . payload execution = 3296 s
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | . stage-out = 0 s
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | . log creation = 0 s
[2026-03-31 20:08:37] 2026-03-31 18:07:49,220 | INFO     | ..............................
[2026-03-31 20:08:37] 2026-03-31 18:07:49,264 | INFO     | 
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | job summary report
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | --------------------------------------------------
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | PanDA job id: 7071936481
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | task id: 49180840
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | errors: (none)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | pilot state: finished 
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | transexitcode: 0
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | exeerrorcode: 0
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | exeerrordiag: 
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | exitcode: 0
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | exitmsg: OK
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | cpuconsumptiontime: 36089 s
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | nevents: 400
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | neventsw: 0
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | pid: 2776962
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | pgrp: 2776962
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | corecount: 12
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | event service: False
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | sizes: {0: 2280396, 11: 2280396, 3305: 2305952, 3307: 2314974, 3310: 2315030, 3312: 2315256}
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | --------------------------------------------------
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | 
[2026-03-31 20:08:37] 2026-03-31 18:07:49,265 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/10
[2026-03-31 20:08:37] 2026-03-31 18:07:49,281 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | job 7071936481 has completed (purged errors)
[2026-03-31 20:08:37] 2026-03-31 18:07:49,282 | INFO     | overall cleanup function is called
[2026-03-31 20:08:37] 2026-03-31 18:07:50,290 | INFO     | --- collectZombieJob: --- 10, [2776962]
[2026-03-31 20:08:37] 2026-03-31 18:07:50,290 | INFO     | zombie collector waiting for pid 2776962
[2026-03-31 20:08:37] 2026-03-31 18:07:50,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 20:08:37] 2026-03-31 18:07:50,290 | INFO     | collected zombie processes
[2026-03-31 20:08:37] 2026-03-31 18:07:50,291 | INFO     | will attempt to kill all subprocesses of pid=2776962
[2026-03-31 20:08:37] 2026-03-31 18:07:50,629 | INFO     | process IDs to be killed: [2776962] (in reverse order)
[2026-03-31 20:08:37] 2026-03-31 18:07:50,775 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 20:08:37] 2026-03-31 18:07:50,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 20:08:37] 2026-03-31 18:07:50,800 | INFO     | did not find any defunct processes belonging to 2776962
[2026-03-31 20:08:37] 2026-03-31 18:07:50,824 | INFO     | did not find any defunct processes belonging to 2776962
[2026-03-31 20:08:37] 2026-03-31 18:07:50,824 | INFO     | ready for new job
[2026-03-31 20:08:37] 2026-03-31 18:07:50,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-31 20:08:37] 2026-03-31 18:07:50,825 | INFO     | **************************************
[2026-03-31 20:08:37] 2026-03-31 18:07:50,825 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-31 20:08:37] 2026-03-31 18:07:50,825 | INFO     | **************************************
[2026-03-31 20:08:37] 2026-03-31 18:07:50,825 | INFO     | 
[2026-03-31 20:08:37] 2026-03-31 18:07:50,830 | INFO     | architecture information:
[2026-03-31 20:08:37] 2026-03-31 18:07:50,830 | INFO     | executing command: cat /etc/os-release
[2026-03-31 20:08:37] 2026-03-31 18:07:50,841 | INFO     | cat /etc/os-release:
[2026-03-31 20:08:37] NAME="CentOS Linux"
[2026-03-31 20:08:37] VERSION="7 (Core)"
[2026-03-31 20:08:37] ID="centos"
[2026-03-31 20:08:37] ID_LIKE="rhel fedora"
[2026-03-31 20:08:37] VERSION_ID="7"
[2026-03-31 20:08:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 20:08:37] ANSI_COLOR="0;31"
[2026-03-31 20:08:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 20:08:37] HOME_URL="https://www.centos.org/"
[2026-03-31 20:08:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 20:08:37] 
[2026-03-31 20:08:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 20:08:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 20:08:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 20:08:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 20:08:37] 
[2026-03-31 20:08:37] 2026-03-31 18:07:50,841 | INFO     | **************************************
[2026-03-31 20:08:37] 2026-03-31 18:07:51,344 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/10
[2026-03-31 20:08:37] 2026-03-31 18:07:51,356 | INFO     | sufficient remaining disk space (218163576832 B)
[2026-03-31 20:08:37] 2026-03-31 18:07:51,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 20:08:37] 2026-03-31 18:07:51,356 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 20:08:37] 2026-03-31 18:07:51,356 | INFO     | update_server=False
[2026-03-31 20:08:37] 2026-03-31 18:07:51,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-31 20:08:37] 2026-03-31 18:07:51,483 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 20:08:37] 2026-03-31 18:07:51,483 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 20:08:37] 2026-03-31 18:07:51,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 20:08:37] 2026-03-31 18:07:51,483 | INFO     | will abort loop
[2026-03-31 20:08:37] 2026-03-31 18:07:51,484 | INFO     | all job control threads have been joined
[2026-03-31 20:08:37] 2026-03-31 18:07:51,944 | INFO     | all payload control threads have been joined
[2026-03-31 20:08:37] 2026-03-31 18:07:52,359 | INFO     | [job] retrieve thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:52,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 20:08:37] 2026-03-31 18:07:52,409 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:52,412 | INFO     | all data control threads have been joined
[2026-03-31 20:08:37] 2026-03-31 18:07:52,489 | INFO     | [job] job monitor thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:52,489 | INFO     | [job] control thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:52,563 | INFO     | [payload] failed_post thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:52,949 | INFO     | [payload] control thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:52,968 | INFO     | [job] validate thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:53,066 | INFO     | [payload] validate_post thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:53,076 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:53,295 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:53,417 | INFO     | [data] control thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:53,566 | INFO     | [data] copytool_in thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:53,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 20:08:37] 2026-03-31 18:07:54,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 20:08:37] 2026-03-31 18:07:54,397 | INFO     | [data] copytool_out thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:55,280 | INFO     | [job] queue monitor thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:07:57,617 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:08:01,672 | INFO     | job.realtimelogging is not enabled
[2026-03-31 20:08:37] 2026-03-31 18:08:02,677 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 20:08:37] 2026-03-31 18:08:21,408 | INFO     | PID=2756769 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 20:08:37] 2026-03-31 18:08:21,408 | INFO     | .. there are 14 such processes running
[2026-03-31 20:08:37] 2026-03-31 18:08:21,409 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 20:08:37] 2026-03-31 18:08:21,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 20:08:37] 2026-03-31 18:08:21,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 20:08:37] 2026-03-31 18:08:30,429 | INFO     | [monitor] cgroup control has ended
[2026-03-31 20:08:37] 2026-03-31 18:08:32,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22637678102336)>', '<ExcThread(monitor, started 22637440153344)>']
[2026-03-31 20:08:37] 2026-03-31 18:08:32,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 20:08:37] 2026-03-31 18:08:32,465 | INFO     | [monitor] control thread has ended
[2026-03-31 20:08:37] 2026-03-31 18:08:37,055 | INFO     | all workflow threads have been joined
[2026-03-31 20:08:37] 2026-03-31 18:08:37,055 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 20:08:37] 2026-03-31 18:08:37,056 | INFO     | traces error code: 0
[2026-03-31 20:08:37] 2026-03-31 18:08:37,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 20:08:37] 2026-03-31 18:08:37,191 [wrapper] ==== pilot stdout END ====
[2026-03-31 20:08:37] 2026-03-31 18:08:37,194 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 20:08:37] 2026-03-31 18:08:37,196 [wrapper] pilotpid: 2756769
[2026-03-31 20:08:37] 2026-03-31 18:08:37,198 [wrapper] Pilot exit status: 0
[2026-03-31 20:08:37] 2026-03-31 18:08:37,207 [wrapper] pandaids: 7071936481
[2026-03-31 20:08:37] 2026-03-31 18:08:37,320 [wrapper] cleanup supervisor_pilot 3161061 2756770
[2026-03-31 20:08:37] 2026-03-31 18:08:37,323 [wrapper] Test setup, not cleaning
[2026-03-31 20:08:37] 2026-03-31 18:08:37,325 [wrapper] apfmon messages muted
[2026-03-31 20:08:37] 2026-03-31 18:08:37,327 [wrapper] ==== wrapper stdout END ====
[2026-03-31 20:08:37] 2026-03-31 18:08:37,329 [wrapper] ==== wrapper stderr END ====
[2026-03-31 20:08:37]  *** Error codes and diagnostics ***
[2026-03-31 20:08:37]     "exeErrorCode": 0,
[2026-03-31 20:08:37]     "exeErrorDiag": "",
[2026-03-31 20:08:37]     "pilotErrorCode": 0,
[2026-03-31 20:08:37]     "pilotErrorDiag": "",
[2026-03-31 20:08:37]  *** Listing of results directory ***
[2026-03-31 20:08:37] total 430892
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc      5118 Mar 28 10:12 queuedata.json
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc    585013 Mar 28 10:12 pilot3.tar.gz
[2026-03-31 20:08:37] -rwx------. 1 boinc boinc     36322 Mar 28 10:12 runpilot2-wrapper.sh
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc       100 Mar 31 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 20:08:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 19:12 run_atlas
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc       105 Mar 31 19:12 job.xml
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc      6710 Mar 31 19:12 init_data.xml
[2026-03-31 20:08:37] -rw-r--r--. 2 boinc boinc 229575677 Mar 31 19:12 EVNT.49133980._000003.pool.root.1
[2026-03-31 20:08:37] -rw-r--r--. 2 boinc boinc     15845 Mar 31 19:12 start_atlas.sh
[2026-03-31 20:08:37] drwxrwx--x. 2 boinc boinc      4096 Mar 31 19:12 shared
[2026-03-31 20:08:37] -rw-r--r--. 2 boinc boinc    597570 Mar 31 19:12 input.tar.gz
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc         0 Mar 31 19:12 boinc_lockfile
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc      2691 Mar 31 19:12 pandaJob.out
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc   1003320 Mar 31 19:12 agis_schedconf.cvmfs.json
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc   1511579 Mar 31 19:12 agis_ddmendpoints.agis.ALL.json
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc       443 Mar 31 19:12 workernode_map.json
[2026-03-31 20:08:37] drwx------. 5 boinc boinc      4096 Mar 31 19:12 pilot3
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc 205976832 Mar 31 20:07 HITS.49180840._000229.pool.root.1
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc        95 Mar 31 20:07 pilot_heartbeat.json
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc      1031 Mar 31 20:07 memory_monitor_summary.json
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc    361756 Mar 31 20:07 log.49180840._000229.job.log.tgz.1
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc       529 Mar 31 20:07 boinc_task_state.xml
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc      6347 Mar 31 20:07 heartbeat.json
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc      8192 Mar 31 20:08 boinc_mmap_file
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc        27 Mar 31 20:08 wrapper_checkpoint.txt
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc      5089 Mar 31 20:08 pilotlog.txt
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc    510262 Mar 31 20:08 log.49180840._000229.job.log.1
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc       357 Mar 31 20:08 output.list
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc       620 Mar 31 20:08 runtime_log
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc    890880 Mar 31 20:08 result.tar.gz
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc      9223 Mar 31 20:08 runtime_log.err
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc       663 Mar 31 20:08 XKeNDmnteQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDms6JKDmqKm00n.diag
[2026-03-31 20:08:37] -rw-r--r--. 1 boinc boinc     21782 Mar 31 20:08 stderr.txt
[2026-03-31 20:08:37] HITS file was successfully produced:
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc 205976832 Mar 31 20:07 shared/HITS.pool.root.1
[2026-03-31 20:08:37]  *** Contents of shared directory: ***
[2026-03-31 20:08:37] total 426828
[2026-03-31 20:08:37] -rw-r--r--. 2 boinc boinc 229575677 Mar 31 19:12 ATLAS.root_0
[2026-03-31 20:08:37] -rw-r--r--. 2 boinc boinc     15845 Mar 31 19:12 start_atlas.sh
[2026-03-31 20:08:37] -rw-r--r--. 2 boinc boinc    597570 Mar 31 19:12 input.tar.gz
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc 205976832 Mar 31 20:07 HITS.pool.root.1
[2026-03-31 20:08:37] -rw-------. 1 boinc boinc    890880 Mar 31 20:08 result.tar.gz
20:08:39 (2746357): run_atlas exited; CPU time 36203.987726
20:08:39 (2746357): called boinc_finish(0)

</stderr_txt>
]]>

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