Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:58:08 (3104186): wrapper (7.7.26015): starting
18:58:08 (3104186): wrapper: running run_atlas (--nthreads 4)
[2026-04-02 18:58:08] Arguments: --nthreads 4
[2026-04-02 18:58:08] Threads: 4
[2026-04-02 18:58:08] Checking for CVMFS
[2026-04-02 18:58:08] No cvmfs_config command found, will try listing directly
[2026-04-02 18:58:08] CVMFS is ok
[2026-04-02 18:58:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-02 18:58:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-02 18:58:08] Further information can be found at the LHC@home message board.
[2026-04-02 18:58:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 18:58:08] Checking for apptainer binary...
[2026-04-02 18:58:08] which: no apptainer in ((null))
[2026-04-02 18:58:08] apptainer is not installed, using version from CVMFS
[2026-04-02 18:58:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 18:58:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot92/slots/32/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-04-02 18:58:08] apptainer works
[2026-04-02 18:58:08] Set ATHENA_PROC_NUMBER=4
[2026-04-02 18:58:08] Set ATHENA_CORE_NUMBER=4
[2026-04-02 18:58:09] Starting ATLAS job with PandaID=7071981765
[2026-04-02 18:58:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot92/slots/32 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 04:38:44]  *** The last 200 lines of the pilot log: ***
[2026-04-03 04:38:44] 2026-04-03 02:37:48,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 04:38:44] 2026-04-03 02:37:48,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 04:38:44] 2026-04-03 02:37:48,586 | INFO     | fitting pss+swap vs Time
[2026-04-03 04:38:44] 2026-04-03 02:37:48,587 | INFO     | sum of square deviations: 57425086002.5
[2026-04-03 04:38:44] 2026-04-03 02:37:48,598 | INFO     | sum of deviations: 78121113206.99998
[2026-04-03 04:38:44] 2026-04-03 02:37:48,598 | INFO     | mean x: 1775166505.5
[2026-04-03 04:38:44] 2026-04-03 02:37:48,598 | INFO     | mean y: 2337121.0701754387
[2026-04-03 04:38:44] 2026-04-03 02:37:48,598 | INFO     | intersect: -2412600203.2100654
[2026-04-03 04:38:44] 2026-04-03 02:37:48,599 | INFO     | chi2: 2.114277745716945
[2026-04-03 04:38:44] 2026-04-03 02:37:48,600 | INFO     | sum of square deviations: 55927113730.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,611 | INFO     | sum of deviations: 110449161023.99998
[2026-04-03 04:38:44] 2026-04-03 02:37:48,611 | INFO     | mean x: 1775166353.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,611 | INFO     | mean y: 2340388.3115044245
[2026-04-03 04:38:44] 2026-04-03 02:37:48,611 | INFO     | intersect: -3503394510.03194
[2026-04-03 04:38:44] 2026-04-03 02:37:48,612 | INFO     | chi2: 1.4443459857908603
[2026-04-03 04:38:44] 2026-04-03 02:37:48,612 | INFO     | current chi2=1.4443459857908603 (change=31.68608104035608 %)
[2026-04-03 04:38:44] 2026-04-03 02:37:48,613 | INFO     | sum of square deviations: 54455421020.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,624 | INFO     | sum of deviations: 109285385822.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,624 | INFO     | mean x: 1775166200.5
[2026-04-03 04:38:44] 2026-04-03 02:37:48,624 | INFO     | mean y: 2340267.717857143
[2026-04-03 04:38:44] 2026-04-03 02:37:48,624 | INFO     | intersect: -3560201706.726991
[2026-04-03 04:38:44] 2026-04-03 02:37:48,625 | INFO     | chi2: 1.4443976925577642
[2026-04-03 04:38:44] 2026-04-03 02:37:48,625 | INFO     | current chi2=1.4443976925577642 (change=-0.003579943269313108 %)
[2026-04-03 04:38:44] 2026-04-03 02:37:48,625 | INFO     | right removable region: 559
[2026-04-03 04:38:44] 2026-04-03 02:37:48,626 | INFO     | sum of square deviations: 55927113730.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,637 | INFO     | sum of deviations: -1019949645.9999962
[2026-04-03 04:38:44] 2026-04-03 02:37:48,638 | INFO     | mean x: 1775166658.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,638 | INFO     | mean y: 2345143.339823009
[2026-04-03 04:38:44] 2026-04-03 02:37:48,638 | INFO     | intersect: 34719075.832729004
[2026-04-03 04:38:44] 2026-04-03 02:37:48,639 | INFO     | chi2: 0.7030267163828086
[2026-04-03 04:38:44] 2026-04-03 02:37:48,639 | INFO     | current chi2=0.7030267163828086 (change=66.74861106555258 %)
[2026-04-03 04:38:44] 2026-04-03 02:37:48,640 | INFO     | sum of square deviations: 54455421020.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,650 | INFO     | sum of deviations: -1733996461.5000038
[2026-04-03 04:38:44] 2026-04-03 02:37:48,650 | INFO     | mean x: 1775166810.5
[2026-04-03 04:38:44] 2026-04-03 02:37:48,651 | INFO     | mean y: 2345217.2017857144
[2026-04-03 04:38:44] 2026-04-03 02:37:48,651 | INFO     | intersect: 58870957.1616096
[2026-04-03 04:38:44] 2026-04-03 02:37:48,652 | INFO     | chi2: 0.7030304988836933
[2026-04-03 04:38:44] 2026-04-03 02:37:48,652 | INFO     | current chi2=0.7030304988836933 (change=-0.0005380308879571346 %)
[2026-04-03 04:38:44] 2026-04-03 02:37:48,652 | INFO     | left removable region: 20
[2026-04-03 04:38:44] 2026-04-03 02:37:48,653 | INFO     | sum of square deviations: 48556035990.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,663 | INFO     | sum of deviations: 38917915820.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,663 | INFO     | mean x: 1775166780.0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,663 | INFO     | mean y: 2347604.5435992577
[2026-04-03 04:38:44] 2026-04-03 02:37:48,663 | INFO     | intersect: -1420457818.1381145
[2026-04-03 04:38:44] 2026-04-03 02:37:48,664 | INFO     | chi2: 0.005300442105883397
[2026-04-03 04:38:44] 2026-04-03 02:37:48,664 | INFO     | current memory leak: 0.80 B/s (using 539 data points, chi2=0.01)
[2026-04-03 04:38:44] 2026-04-03 02:37:48,665 | INFO     | could have reported an average CPU frequency of 1995 MHz (23 samples)
[2026-04-03 04:38:44] 2026-04-03 02:37:48,666 | INFO     | ..............................
[2026-04-03 04:38:44] 2026-04-03 02:37:48,666 | INFO     | . Timing measurements:
[2026-04-03 04:38:44] 2026-04-03 02:37:48,666 | INFO     | . get job = 0 s
[2026-04-03 04:38:44] 2026-04-03 02:37:48,666 | INFO     | . initial setup = 11 s
[2026-04-03 04:38:44] 2026-04-03 02:37:48,666 | INFO     | . payload setup = 19 s
[2026-04-03 04:38:44] 2026-04-03 02:37:48,666 | INFO     | . stage-in = 0 s
[2026-04-03 04:38:44] 2026-04-03 02:37:48,667 | INFO     | . payload execution = 34719 s
[2026-04-03 04:38:44] 2026-04-03 02:37:48,667 | INFO     | . stage-out = 1 s
[2026-04-03 04:38:44] 2026-04-03 02:37:48,667 | INFO     | . log creation = 0 s
[2026-04-03 04:38:44] 2026-04-03 02:37:48,667 | INFO     | ..............................
[2026-04-03 04:38:44] 2026-04-03 02:37:48,809 | INFO     | 
[2026-04-03 04:38:44] 2026-04-03 02:37:48,809 | INFO     | job summary report
[2026-04-03 04:38:44] 2026-04-03 02:37:48,810 | INFO     | --------------------------------------------------
[2026-04-03 04:38:44] 2026-04-03 02:37:48,810 | INFO     | PanDA job id: 7071981765
[2026-04-03 04:38:44] 2026-04-03 02:37:48,810 | INFO     | task id: 49176867
[2026-04-03 04:38:44] 2026-04-03 02:37:48,810 | INFO     | errors: (none)
[2026-04-03 04:38:44] 2026-04-03 02:37:48,810 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 04:38:44] 2026-04-03 02:37:48,810 | INFO     | pilot state: finished 
[2026-04-03 04:38:44] 2026-04-03 02:37:48,810 | INFO     | transexitcode: 0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,811 | INFO     | exeerrorcode: 0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,814 | INFO     | exeerrordiag: 
[2026-04-03 04:38:44] 2026-04-03 02:37:48,814 | INFO     | exitcode: 0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,814 | INFO     | exitmsg: OK
[2026-04-03 04:38:44] 2026-04-03 02:37:48,814 | INFO     | cpuconsumptiontime: 132176 s
[2026-04-03 04:38:44] 2026-04-03 02:37:48,815 | INFO     | nevents: 400
[2026-04-03 04:38:44] 2026-04-03 02:37:48,815 | INFO     | neventsw: 0
[2026-04-03 04:38:44] 2026-04-03 02:37:48,815 | INFO     | pid: 3122671
[2026-04-03 04:38:44] 2026-04-03 02:37:48,815 | INFO     | pgrp: 3122671
[2026-04-03 04:38:44] 2026-04-03 02:37:48,815 | INFO     | corecount: 4
[2026-04-03 04:38:44] 2026-04-03 02:37:48,815 | INFO     | event service: False
[2026-04-03 04:38:44] 2026-04-03 02:37:48,815 | INFO     | sizes: {0: 2280053, 1: 2280287, 34743: 2320800, 34745: 2329822, 34746: 2329878, 34747: 2330072}
[2026-04-03 04:38:44] 2026-04-03 02:37:48,816 | INFO     | --------------------------------------------------
[2026-04-03 04:38:44] 2026-04-03 02:37:48,816 | INFO     | 
[2026-04-03 04:38:44] 2026-04-03 02:37:48,816 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot92/slots/32
[2026-04-03 04:38:44] 2026-04-03 02:37:48,861 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,862 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,862 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,862 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,864 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,864 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 04:38:44] 2026-04-03 02:37:48,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,864 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 04:38:44] 2026-04-03 02:37:48,864 | INFO     | job 7071981765 has completed (purged errors)
[2026-04-03 04:38:44] 2026-04-03 02:37:48,865 | INFO     | overall cleanup function is called
[2026-04-03 04:38:44] 2026-04-03 02:37:49,320 | INFO     | PID=3111964 has CPU usage=22.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-03 04:38:44] 2026-04-03 02:37:49,320 | INFO     | .. there are 22 such processes running
[2026-04-03 04:38:44] 2026-04-03 02:37:49,879 | INFO     | --- collectZombieJob: --- 10, [3122671]
[2026-04-03 04:38:44] 2026-04-03 02:37:49,879 | INFO     | zombie collector waiting for pid 3122671
[2026-04-03 04:38:44] 2026-04-03 02:37:49,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 04:38:44] 2026-04-03 02:37:49,879 | INFO     | collected zombie processes
[2026-04-03 04:38:44] 2026-04-03 02:37:49,879 | INFO     | will attempt to kill all subprocesses of pid=3122671
[2026-04-03 04:38:44] 2026-04-03 02:37:51,951 | INFO     | process IDs to be killed: [3122671] (in reverse order)
[2026-04-03 04:38:44] 2026-04-03 02:37:52,303 | WARNING  | process 3122671 can no longer be monitored (due to stat problems) - aborting
[2026-04-03 04:38:44] 2026-04-03 02:37:52,471 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 04:38:44] 2026-04-03 02:37:52,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 04:38:44] 2026-04-03 02:37:52,593 | INFO     | did not find any defunct processes belonging to 3122671
[2026-04-03 04:38:44] 2026-04-03 02:37:52,720 | INFO     | did not find any defunct processes belonging to 3122671
[2026-04-03 04:38:44] 2026-04-03 02:37:52,720 | INFO     | ready for new job
[2026-04-03 04:38:44] 2026-04-03 02:37:52,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 04:38:44] 2026-04-03 02:37:52,733 | INFO     | **************************************
[2026-04-03 04:38:44] 2026-04-03 02:37:52,733 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 04:38:44] 2026-04-03 02:37:52,733 | INFO     | **************************************
[2026-04-03 04:38:44] 2026-04-03 02:37:52,733 | INFO     | 
[2026-04-03 04:38:44] 2026-04-03 02:37:52,748 | INFO     | architecture information:
[2026-04-03 04:38:44] 2026-04-03 02:37:52,750 | INFO     | executing command: cat /etc/os-release
[2026-04-03 04:38:44] 2026-04-03 02:37:52,784 | INFO     | cat /etc/os-release:
[2026-04-03 04:38:44] NAME="CentOS Linux"
[2026-04-03 04:38:44] VERSION="7 (Core)"
[2026-04-03 04:38:44] ID="centos"
[2026-04-03 04:38:44] ID_LIKE="rhel fedora"
[2026-04-03 04:38:44] VERSION_ID="7"
[2026-04-03 04:38:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 04:38:44] ANSI_COLOR="0;31"
[2026-04-03 04:38:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 04:38:44] HOME_URL="https://www.centos.org/"
[2026-04-03 04:38:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 04:38:44] 
[2026-04-03 04:38:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 04:38:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 04:38:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 04:38:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 04:38:44] 
[2026-04-03 04:38:44] 2026-04-03 02:37:52,784 | INFO     | **************************************
[2026-04-03 04:38:44] 2026-04-03 02:37:53,265 | INFO     | using path: /var/lib/boinc/var/slot92/slots/32/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 04:38:44] 2026-04-03 02:37:53,287 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/32
[2026-04-03 04:38:44] 2026-04-03 02:37:53,321 | INFO     | sufficient remaining disk space (282067992576 B)
[2026-04-03 04:38:44] 2026-04-03 02:37:53,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 04:38:44] 2026-04-03 02:37:53,322 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 04:38:44] 2026-04-03 02:37:53,322 | INFO     | update_server=False
[2026-04-03 04:38:44] 2026-04-03 02:37:53,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 04:38:44] 2026-04-03 02:37:53,363 | INFO     | all data control threads have been joined
[2026-04-03 04:38:44] 2026-04-03 02:37:53,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 04:38:44] 2026-04-03 02:37:53,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 04:38:44] 2026-04-03 02:37:53,876 | INFO     | all payload control threads have been joined
[2026-04-03 04:38:44] 2026-04-03 02:37:54,114 | INFO     | all job control threads have been joined
[2026-04-03 04:38:44] 2026-04-03 02:37:54,327 | INFO     | [job] retrieve thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:54,359 | INFO     | [job] validate thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:54,369 | INFO     | [data] control thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:54,408 | INFO     | number of running child processes to parent process 3122671: 1
[2026-04-03 04:38:44] 2026-04-03 02:37:54,408 | INFO     | maximum number of monitored processes: 6
[2026-04-03 04:38:44] 2026-04-03 02:37:54,409 | INFO     | aborting job monitoring since job object (job id=7071981765) has expired
[2026-04-03 04:38:44] 2026-04-03 02:37:54,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 04:38:44] 2026-04-03 02:37:54,409 | INFO     | will abort loop
[2026-04-03 04:38:44] 2026-04-03 02:37:54,486 | INFO     | [payload] failed_post thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:54,678 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:54,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 04:38:44] 2026-04-03 02:37:54,817 | INFO     | [job] queue monitor thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:54,882 | INFO     | [payload] control thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:55,037 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:55,120 | INFO     | [job] control thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:55,155 | INFO     | [data] copytool_in thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:55,213 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:55,414 | INFO     | [job] job monitor thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:55,746 | INFO     | [payload] validate_post thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:56,732 | INFO     | [data] copytool_out thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:37:57,668 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:38:03,748 | INFO     | job.realtimelogging is not enabled
[2026-04-03 04:38:44] 2026-04-03 02:38:04,753 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 04:38:44] 2026-04-03 02:38:22,589 | INFO     | PID=3111964 has CPU usage=19.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-03 04:38:44] 2026-04-03 02:38:22,589 | INFO     | .. there are 22 such processes running
[2026-04-03 04:38:44] 2026-04-03 02:38:22,589 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 04:38:44] 2026-04-03 02:38:22,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 04:38:44] 2026-04-03 02:38:22,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 04:38:44] 2026-04-03 02:38:38,362 | INFO     | [monitor] cgroup control has ended
[2026-04-03 04:38:44] 2026-04-03 02:38:38,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22747891234624)>', '<ExcThread(monitor, started 22747647575808)>']
[2026-04-03 04:38:44] 2026-04-03 02:38:38,669 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 04:38:44] 2026-04-03 02:38:38,669 | INFO     | [monitor] control thread has ended
[2026-04-03 04:38:44] 2026-04-03 02:38:43,651 | INFO     | all workflow threads have been joined
[2026-04-03 04:38:44] 2026-04-03 02:38:43,653 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 04:38:44] 2026-04-03 02:38:43,653 | INFO     | traces error code: 0
[2026-04-03 04:38:44] 2026-04-03 02:38:43,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 04:38:44] 2026-04-03 02:38:43,804 [wrapper] ==== pilot stdout END ====
[2026-04-03 04:38:44] 2026-04-03 02:38:43,809 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 04:38:44] 2026-04-03 02:38:43,814 [wrapper] pilotpid: 3111964
[2026-04-03 04:38:44] 2026-04-03 02:38:43,818 [wrapper] Pilot exit status: 0
[2026-04-03 04:38:44] 2026-04-03 02:38:43,839 [wrapper] pandaids: 7071981765
[2026-04-03 04:38:44] 2026-04-03 02:38:44,098 [wrapper] cleanup supervisor_pilot 4020420 3111965
[2026-04-03 04:38:44] 2026-04-03 02:38:44,104 [wrapper] Test setup, not cleaning
[2026-04-03 04:38:44] 2026-04-03 02:38:44,109 [wrapper] apfmon messages muted
[2026-04-03 04:38:44] 2026-04-03 02:38:44,114 [wrapper] ==== wrapper stdout END ====
[2026-04-03 04:38:44] 2026-04-03 02:38:44,118 [wrapper] ==== wrapper stderr END ====
[2026-04-03 04:38:44]  *** Error codes and diagnostics ***
[2026-04-03 04:38:44]     "exeErrorCode": 0,
[2026-04-03 04:38:44]     "exeErrorDiag": "",
[2026-04-03 04:38:44]     "pilotErrorCode": 0,
[2026-04-03 04:38:44]     "pilotErrorDiag": "",
[2026-04-03 04:38:44]  *** Listing of results directory ***
[2026-04-03 04:38:44] total 481900
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc      5118 Mar 28 10:12 queuedata.json
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc    585013 Mar 28 10:12 pilot3.tar.gz
[2026-04-03 04:38:44] -rwx------. 1 boinc boinc     36322 Mar 28 10:12 runpilot2-wrapper.sh
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc       100 Apr  2 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 04:38:44] -rwxr-xr-x. 1 boinc boinc      7986 Apr  2 18:58 run_atlas
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc       105 Apr  2 18:58 job.xml
[2026-04-03 04:38:44] -rw-r--r--. 2 boinc boinc 241047683 Apr  2 18:58 EVNT.49135537._000002.pool.root.1
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc      6694 Apr  2 18:58 init_data.xml
[2026-04-03 04:38:44] -rw-r--r--. 2 boinc boinc     15845 Apr  2 18:58 start_atlas.sh
[2026-04-03 04:38:44] drwxrwx--x. 2 boinc boinc      4096 Apr  2 18:58 shared
[2026-04-03 04:38:44] -rw-r--r--. 2 boinc boinc    597546 Apr  2 18:58 input.tar.gz
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc         0 Apr  2 18:58 boinc_lockfile
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc      2610 Apr  2 18:58 pandaJob.out
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc   1005183 Apr  2 18:58 agis_schedconf.cvmfs.json
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc       439 Apr  2 18:58 workernode_map.json
[2026-04-03 04:38:44] drwx------. 5 boinc boinc      4096 Apr  2 18:58 pilot3
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc 238107567 Apr  3 04:36 HITS.49176867._001020.pool.root.1
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc       530 Apr  3 04:37 boinc_task_state.xml
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc        95 Apr  3 04:37 pilot_heartbeat.json
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc      1029 Apr  3 04:37 memory_monitor_summary.json
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc   1511579 Apr  3 04:37 agis_ddmendpoints.agis.ALL.json
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc    672277 Apr  3 04:37 log.49176867._001020.job.log.tgz.1
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc      6346 Apr  3 04:37 heartbeat.json
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc      8192 Apr  3 04:38 boinc_mmap_file
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc        28 Apr  3 04:38 wrapper_checkpoint.txt
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc      5323 Apr  3 04:38 pilotlog.txt
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc   4515718 Apr  3 04:38 log.49176867._001020.job.log.1
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc       357 Apr  3 04:38 output.list
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc       620 Apr  3 04:38 runtime_log
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc   5201920 Apr  3 04:38 result.tar.gz
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc      9222 Apr  3 04:38 runtime_log.err
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc       669 Apr  3 04:38 ORlNDmeteQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmFhHKDmmMzEWn.diag
[2026-04-03 04:38:44] -rw-r--r--. 1 boinc boinc     20990 Apr  3 04:38 stderr.txt
[2026-04-03 04:38:44] HITS file was successfully produced:
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc 238107567 Apr  3 04:36 shared/HITS.pool.root.1
[2026-04-03 04:38:44]  *** Contents of shared directory: ***
[2026-04-03 04:38:44] total 473616
[2026-04-03 04:38:44] -rw-r--r--. 2 boinc boinc 241047683 Apr  2 18:58 ATLAS.root_0
[2026-04-03 04:38:44] -rw-r--r--. 2 boinc boinc     15845 Apr  2 18:58 start_atlas.sh
[2026-04-03 04:38:44] -rw-r--r--. 2 boinc boinc    597546 Apr  2 18:58 input.tar.gz
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc 238107567 Apr  3 04:36 HITS.pool.root.1
[2026-04-03 04:38:44] -rw-------. 1 boinc boinc   5201920 Apr  3 04:38 result.tar.gz
04:38:46 (3104186): run_atlas exited; CPU time 135705.699621
04:38:46 (3104186): called boinc_finish(0)

</stderr_txt>
]]>

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