Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:46:41 (411700): wrapper (7.7.26015): starting
18:46:41 (411700): wrapper: running run_atlas (--nthreads 12)
[2026-03-29 18:46:41] Arguments: --nthreads 12
[2026-03-29 18:46:41] Threads: 12
[2026-03-29 18:46:41] Checking for CVMFS
[2026-03-29 18:46:41] No cvmfs_config command found, will try listing directly
[2026-03-29 18:46:41] CVMFS is ok
[2026-03-29 18:46:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 18:46:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 18:46:41] Further information can be found at the LHC@home message board.
[2026-03-29 18:46:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 18:46:41] Checking for apptainer binary...
[2026-03-29 18:46:41] which: no apptainer in ((null))
[2026-03-29 18:46:41] apptainer is not installed, using version from CVMFS
[2026-03-29 18:46:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 18:46:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-29 18:46:42] apptainer works
[2026-03-29 18:46:42] Set ATHENA_PROC_NUMBER=12
[2026-03-29 18:46:42] Set ATHENA_CORE_NUMBER=12
[2026-03-29 18:46:42] Starting ATLAS job with PandaID=7071887058
[2026-03-29 18:46:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 19:54:05]  *** The last 200 lines of the pilot log: ***
[2026-03-29 19:54:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-29 19:54:05]  is_altstaged=None
[2026-03-29 19:54:05]  is_tar=False
[2026-03-29 19:54:05]  lfn=log.49176849._000478.job.log.tgz.1
[2026-03-29 19:54:05]  mtime=0
[2026-03-29 19:54:05]  protocol_id=None
[2026-03-29 19:54:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-29 19:54:05]  replicas=None
[2026-03-29 19:54:05]  scope=mc23_13p6TeV
[2026-03-29 19:54:05]  status=None
[2026-03-29 19:54:05]  status_code=0
[2026-03-29 19:54:05]  storage_token=
[2026-03-29 19:54:05]  surl=/var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7071887058/log.49176849._000478.job.log.tgz.1
[2026-03-29 19:54:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/da/log.49176849._000478.job.log.tgz.1
[2026-03-29 19:54:05]  workdir=None
[2026-03-29 19:54:05] ]
[2026-03-29 19:54:05] 2026-03-29 17:53:08,325 | INFO     | transferring file log.49176849._000478.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7071887058/log.49176849._000478.job.log.tgz.1 to /var/lib/
[2026-03-29 19:54:05] 2026-03-29 17:53:08,325 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7071887058/log.49176849._000478.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/1/
[2026-03-29 19:54:05] 2026-03-29 17:53:08,343 | INFO     | adding to output.list: log.49176849._000478.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/da/log.49176849._000478.job.log.tg
[2026-03-29 19:54:05] 2026-03-29 17:53:08,343 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-29 19:54:05] 2026-03-29 17:53:08,343 | INFO     | summary of transferred files:
[2026-03-29 19:54:05] 2026-03-29 17:53:08,343 | INFO     |  -- lfn=log.49176849._000478.job.log.tgz.1, status_code=0, status=transferred
[2026-03-29 19:54:05] 2026-03-29 17:53:08,344 | INFO     | stage-out finished correctly
[2026-03-29 19:54:05] 2026-03-29 17:53:08,392 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-29 19:54:05] 2026-03-29 17:53:08,567 | WARNING  | process 423229 can no longer be monitored (due to stat problems) - aborting
[2026-03-29 19:54:05] 2026-03-29 17:53:08,567 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7071887058/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 19:54:05] 2026-03-29 17:53:08,904 | INFO     | number of running child processes to parent process 423229: 1
[2026-03-29 19:54:05] 2026-03-29 17:53:08,904 | INFO     | maximum number of monitored processes: 6
[2026-03-29 19:54:05] 2026-03-29 17:53:09,852 | INFO     | time since job start (3975s) is within the limit (345600.0s)
[2026-03-29 19:54:05] 2026-03-29 17:53:09,910 | INFO     | job 7071887058 has state=finished
[2026-03-29 19:54:05] 2026-03-29 17:53:09,911 | INFO     | preparing for final server update for job 7071887058 in state='finished'
[2026-03-29 19:54:05] 2026-03-29 17:53:09,911 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7071887058/jobReport.json
[2026-03-29 19:54:05] 2026-03-29 17:53:09,912 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/1/workernode_map.json
[2026-03-29 19:54:05] 2026-03-29 17:53:09,913 | INFO     | this job has now completed (state=finished)
[2026-03-29 19:54:05] 2026-03-29 17:53:09,913 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 19:54:05] 2026-03-29 17:53:09,913 | INFO     | log transfer has been attempted: DONE
[2026-03-29 19:54:05] 2026-03-29 17:53:09,913 | INFO     | job 7071887058 has finished - writing final server update
[2026-03-29 19:54:05] 2026-03-29 17:53:09,913 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2061516/.job.ad'
[2026-03-29 19:54:05] 2026-03-29 17:53:09,913 | INFO     | total number of processed events: 400 (read)
[2026-03-29 19:54:05] 2026-03-29 17:53:09,931 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7071887058/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 19:54:05] 2026-03-29 17:53:09,931 | INFO     | extracted standard info from prmon json
[2026-03-29 19:54:05] 2026-03-29 17:53:09,931 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 19:54:05] 2026-03-29 17:53:09,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 19:54:05] 2026-03-29 17:53:09,932 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 19:54:05] 2026-03-29 17:53:09,932 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | fitting pss+swap vs Time
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | sum of square deviations: 60482994.5
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | sum of deviations: 461362947.0
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | mean x: 1774804878.5
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | mean y: 2715859.827586207
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | intersect: -13535456577.959648
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | chi2: 0.0008527866628882792
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | current memory leak: 7.63 B/s (using 58 data points, chi2=0.00)
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | could have reported an average CPU frequency of 3590 MHz (6 samples)
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | ..............................
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | . Timing measurements:
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | . get job = 0 s
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | . initial setup = 4 s
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | . payload setup = 6 s
[2026-03-29 19:54:05] 2026-03-29 17:53:09,933 | INFO     | . stage-in = 0 s
[2026-03-29 19:54:05] 2026-03-29 17:53:09,934 | INFO     | . payload execution = 3952 s
[2026-03-29 19:54:05] 2026-03-29 17:53:09,934 | INFO     | . stage-out = 0 s
[2026-03-29 19:54:05] 2026-03-29 17:53:09,934 | INFO     | . log creation = 0 s
[2026-03-29 19:54:05] 2026-03-29 17:53:09,934 | INFO     | ..............................
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | 
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | job summary report
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | --------------------------------------------------
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | PanDA job id: 7071887058
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | task id: 49176849
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | errors: (none)
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | pilot state: finished 
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | transexitcode: 0
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | exeerrorcode: 0
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | exeerrordiag: 
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | exitcode: 0
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | exitmsg: OK
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | cpuconsumptiontime: 42987 s
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | nevents: 400
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | neventsw: 0
[2026-03-29 19:54:05] 2026-03-29 17:53:10,158 | INFO     | pid: 423229
[2026-03-29 19:54:05] 2026-03-29 17:53:10,159 | INFO     | pgrp: 423229
[2026-03-29 19:54:05] 2026-03-29 17:53:10,159 | INFO     | corecount: 12
[2026-03-29 19:54:05] 2026-03-29 17:53:10,159 | INFO     | event service: False
[2026-03-29 19:54:05] 2026-03-29 17:53:10,159 | INFO     | sizes: {0: 2280373, 11: 2280373, 3962: 2306308, 3963: 2315386, 3965: 2315524}
[2026-03-29 19:54:05] 2026-03-29 17:53:10,159 | INFO     | --------------------------------------------------
[2026-03-29 19:54:05] 2026-03-29 17:53:10,159 | INFO     | 
[2026-03-29 19:54:05] 2026-03-29 17:53:10,159 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/1
[2026-03-29 19:54:05] 2026-03-29 17:53:10,177 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 19:54:05] 2026-03-29 17:53:10,178 | INFO     | job 7071887058 has completed (purged errors)
[2026-03-29 19:54:05] 2026-03-29 17:53:10,179 | INFO     | overall cleanup function is called
[2026-03-29 19:54:05] 2026-03-29 17:53:11,186 | INFO     | --- collectZombieJob: --- 10, [423229]
[2026-03-29 19:54:05] 2026-03-29 17:53:11,186 | INFO     | zombie collector waiting for pid 423229
[2026-03-29 19:54:05] 2026-03-29 17:53:11,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 19:54:05] 2026-03-29 17:53:11,186 | INFO     | collected zombie processes
[2026-03-29 19:54:05] 2026-03-29 17:53:11,186 | INFO     | will attempt to kill all subprocesses of pid=423229
[2026-03-29 19:54:05] 2026-03-29 17:53:11,524 | INFO     | process IDs to be killed: [423229] (in reverse order)
[2026-03-29 19:54:05] 2026-03-29 17:53:11,669 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 19:54:05] 2026-03-29 17:53:11,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 19:54:05] 2026-03-29 17:53:11,693 | INFO     | did not find any defunct processes belonging to 423229
[2026-03-29 19:54:05] 2026-03-29 17:53:11,716 | INFO     | did not find any defunct processes belonging to 423229
[2026-03-29 19:54:05] 2026-03-29 17:53:11,716 | INFO     | ready for new job
[2026-03-29 19:54:05] 2026-03-29 17:53:11,716 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 19:54:05] 2026-03-29 17:53:11,717 | INFO     | **************************************
[2026-03-29 19:54:05] 2026-03-29 17:53:11,720 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 19:54:05] 2026-03-29 17:53:11,720 | INFO     | **************************************
[2026-03-29 19:54:05] 2026-03-29 17:53:11,720 | INFO     | 
[2026-03-29 19:54:05] 2026-03-29 17:53:11,726 | INFO     | architecture information:
[2026-03-29 19:54:05] 2026-03-29 17:53:11,726 | INFO     | executing command: cat /etc/os-release
[2026-03-29 19:54:05] 2026-03-29 17:53:11,738 | INFO     | cat /etc/os-release:
[2026-03-29 19:54:05] NAME="CentOS Linux"
[2026-03-29 19:54:05] VERSION="7 (Core)"
[2026-03-29 19:54:05] ID="centos"
[2026-03-29 19:54:05] ID_LIKE="rhel fedora"
[2026-03-29 19:54:05] VERSION_ID="7"
[2026-03-29 19:54:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 19:54:05] ANSI_COLOR="0;31"
[2026-03-29 19:54:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 19:54:05] HOME_URL="https://www.centos.org/"
[2026-03-29 19:54:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 19:54:05] 
[2026-03-29 19:54:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 19:54:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 19:54:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 19:54:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 19:54:05] 
[2026-03-29 19:54:05] 2026-03-29 17:53:11,738 | INFO     | **************************************
[2026-03-29 19:54:05] 2026-03-29 17:53:12,241 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/1
[2026-03-29 19:54:05] 2026-03-29 17:53:12,254 | INFO     | sufficient remaining disk space (161278328832 B)
[2026-03-29 19:54:05] 2026-03-29 17:53:12,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 19:54:05] 2026-03-29 17:53:12,257 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 19:54:05] 2026-03-29 17:53:12,257 | INFO     | update_server=False
[2026-03-29 19:54:05] 2026-03-29 17:53:12,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 19:54:05] 2026-03-29 17:53:12,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 19:54:05] 2026-03-29 17:53:12,397 | INFO     | all job control threads have been joined
[2026-03-29 19:54:05] 2026-03-29 17:53:12,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 19:54:05] 2026-03-29 17:53:12,413 | INFO     | aborting loop
[2026-03-29 19:54:05] 2026-03-29 17:53:12,807 | INFO     | all data control threads have been joined
[2026-03-29 19:54:05] 2026-03-29 17:53:13,262 | INFO     | [job] retrieve thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:13,296 | INFO     | all payload control threads have been joined
[2026-03-29 19:54:05] 2026-03-29 17:53:13,406 | INFO     | [job] control thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:13,419 | INFO     | [job] job monitor thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:13,494 | INFO     | [payload] validate_post thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:13,798 | INFO     | [payload] failed_post thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:13,813 | INFO     | [data] control thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:14,160 | INFO     | [job] validate thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:14,263 | INFO     | [data] copytool_out thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:14,301 | INFO     | [payload] control thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:14,383 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:14,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 19:54:05] 2026-03-29 17:53:14,568 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:14,647 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:14,697 | INFO     | [data] copytool_in thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:14,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 19:54:05] 2026-03-29 17:53:15,999 | INFO     | [job] queue monitor thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:18,460 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:22,756 | INFO     | job.realtimelogging is not enabled
[2026-03-29 19:54:05] 2026-03-29 17:53:23,764 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 19:54:05] 2026-03-29 17:53:43,367 | INFO     | PID=416779 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-29 19:54:05] 2026-03-29 17:53:43,367 | INFO     | .. there are 15 such processes running
[2026-03-29 19:54:05] 2026-03-29 17:53:43,367 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 19:54:05] 2026-03-29 17:53:43,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 19:54:05] 2026-03-29 17:53:43,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 19:54:05] 2026-03-29 17:53:59,837 | INFO     | [monitor] cgroup control has ended
[2026-03-29 19:54:05] 2026-03-29 17:54:00,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22892651374400)>', '<ExcThread(monitor, started 22892409788160)>']
[2026-03-29 19:54:05] 2026-03-29 17:54:01,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 19:54:05] 2026-03-29 17:54:01,442 | INFO     | [monitor] control thread has ended
[2026-03-29 19:54:05] 2026-03-29 17:54:05,525 | INFO     | all workflow threads have been joined
[2026-03-29 19:54:05] 2026-03-29 17:54:05,525 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 19:54:05] 2026-03-29 17:54:05,525 | INFO     | traces error code: 0
[2026-03-29 19:54:05] 2026-03-29 17:54:05,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 19:54:05] 2026-03-29 17:54:05,691 [wrapper] ==== pilot stdout END ====
[2026-03-29 19:54:05] 2026-03-29 17:54:05,693 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 19:54:05] 2026-03-29 17:54:05,695 [wrapper] pilotpid: 416779
[2026-03-29 19:54:05] 2026-03-29 17:54:05,697 [wrapper] Pilot exit status: 0
[2026-03-29 19:54:05] 2026-03-29 17:54:05,704 [wrapper] pandaids: 7071887058
[2026-03-29 19:54:05] 2026-03-29 17:54:05,802 [wrapper] cleanup supervisor_pilot  759551 416780
[2026-03-29 19:54:05] 2026-03-29 17:54:05,805 [wrapper] Test setup, not cleaning
[2026-03-29 19:54:05] 2026-03-29 17:54:05,806 [wrapper] apfmon messages muted
[2026-03-29 19:54:05] 2026-03-29 17:54:05,808 [wrapper] ==== wrapper stdout END ====
[2026-03-29 19:54:05] 2026-03-29 17:54:05,810 [wrapper] ==== wrapper stderr END ====
[2026-03-29 19:54:05]  *** Error codes and diagnostics ***
[2026-03-29 19:54:05]     "exeErrorCode": 0,
[2026-03-29 19:54:05]     "exeErrorDiag": "",
[2026-03-29 19:54:05]     "pilotErrorCode": 0,
[2026-03-29 19:54:05]     "pilotErrorDiag": "",
[2026-03-29 19:54:05]  *** Listing of results directory ***
[2026-03-29 19:54:05] total 461932
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc    585013 Mar 28 06:04 pilot3.tar.gz
[2026-03-29 19:54:05] -rwx------. 1 boinc boinc     36322 Mar 28 06:38 runpilot2-wrapper.sh
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc      5118 Mar 28 06:38 queuedata.json
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc       100 Mar 29 18:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 19:54:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar 29 18:46 run_atlas
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc       105 Mar 29 18:46 job.xml
[2026-03-29 19:54:05] -rw-r--r--. 2 boinc boinc     15845 Mar 29 18:46 start_atlas.sh
[2026-03-29 19:54:05] drwxrwx--x. 2 boinc boinc      4096 Mar 29 18:46 shared
[2026-03-29 19:54:05] -rw-r--r--. 2 boinc boinc    597563 Mar 29 18:46 input.tar.gz
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc      6712 Mar 29 18:46 init_data.xml
[2026-03-29 19:54:05] -rw-r--r--. 2 boinc boinc 233729478 Mar 29 18:46 EVNT.49135471._000004.pool.root.1
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc         0 Mar 29 18:46 boinc_lockfile
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc      2640 Mar 29 18:46 pandaJob.out
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc   1003389 Mar 29 18:46 agis_schedconf.cvmfs.json
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc   1511579 Mar 29 18:46 agis_ddmendpoints.agis.ALL.json
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc       444 Mar 29 18:46 workernode_map.json
[2026-03-29 19:54:05] drwx------. 5 boinc boinc      4096 Mar 29 18:46 pilot3
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc 233399442 Mar 29 19:52 HITS.49176849._000478.pool.root.1
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc       529 Mar 29 19:52 boinc_task_state.xml
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc      1028 Mar 29 19:53 memory_monitor_summary.json
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc    377505 Mar 29 19:53 log.49176849._000478.job.log.tgz.1
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc      6343 Mar 29 19:53 heartbeat.json
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc        95 Mar 29 19:53 pilot_heartbeat.json
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc      8192 Mar 29 19:53 boinc_mmap_file
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc        27 Mar 29 19:53 wrapper_checkpoint.txt
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc      4902 Mar 29 19:54 pilotlog.txt
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc    599559 Mar 29 19:54 log.49176849._000478.job.log.1
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc       357 Mar 29 19:54 output.list
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc       620 Mar 29 19:54 runtime_log
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc    993280 Mar 29 19:54 result.tar.gz
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc      9223 Mar 29 19:54 runtime_log.err
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc       663 Mar 29 19:54 XnRMDmGYbQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm4DHKDmaOpQ9m.diag
[2026-03-29 19:54:05] -rw-r--r--. 1 boinc boinc     21300 Mar 29 19:54 stderr.txt
[2026-03-29 19:54:05] HITS file was successfully produced:
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc 233399442 Mar 29 19:52 shared/HITS.pool.root.1
[2026-03-29 19:54:05]  *** Contents of shared directory: ***
[2026-03-29 19:54:05] total 457764
[2026-03-29 19:54:05] -rw-r--r--. 2 boinc boinc     15845 Mar 29 18:46 start_atlas.sh
[2026-03-29 19:54:05] -rw-r--r--. 2 boinc boinc    597563 Mar 29 18:46 input.tar.gz
[2026-03-29 19:54:05] -rw-r--r--. 2 boinc boinc 233729478 Mar 29 18:46 ATLAS.root_0
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc 233399442 Mar 29 19:52 HITS.pool.root.1
[2026-03-29 19:54:05] -rw-------. 1 boinc boinc    993280 Mar 29 19:54 result.tar.gz
19:54:07 (411700): run_atlas exited; CPU time 43122.986890
19:54:07 (411700): called boinc_finish(0)

</stderr_txt>
]]>

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