Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:17:21 (11818): wrapper (7.7.26015): starting
19:17:21 (11818): wrapper: running run_atlas (--nthreads 8)
[2026-03-28 19:17:21] Arguments: --nthreads 8
[2026-03-28 19:17:21] Threads: 8
[2026-03-28 19:17:21] Checking for CVMFS
[2026-03-28 19:17:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 19:17:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 19:17:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 19:17:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 19:17:25] 2.11.2.0 4857 148085 134512 157810 2 53 18027093 25165825 4233 130560 160 43939998 99.832 32493021 1066 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-28 19:17:25] CVMFS is ok
[2026-03-28 19:17:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 19:17:25] Checking for apptainer binary...
[2026-03-28 19:17:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-28 19:17:25] Running /usr/bin/apptainer --version
[2026-03-28 19:17:26] apptainer version 1.3.2-1.el7
[2026-03-28 19:17:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 19:17:44] cg-vwn479.simple-grid.lan
[2026-03-28 19:17:44] apptainer works
[2026-03-28 19:17:44] Set ATHENA_PROC_NUMBER=8
[2026-03-28 19:17:44] Set ATHENA_CORE_NUMBER=8
[2026-03-28 19:17:44] Starting ATLAS job with PandaID=7071865958
[2026-03-28 19:17:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 04:57:52]  *** The last 200 lines of the pilot log: ***
[2026-03-29 04:57:52] 2026-03-29 02:56:56,138 | INFO     | job 7071865958 has finished - writing final server update
[2026-03-29 04:57:52] 2026-03-29 02:56:56,139 | INFO     | total number of processed events: 400 (read)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,141 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7071865958/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,142 | INFO     | extracted standard info from prmon json
[2026-03-29 04:57:52] 2026-03-29 02:56:56,142 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 04:57:52] 2026-03-29 02:56:56,142 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 04:57:52] 2026-03-29 02:56:56,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 04:57:52] 2026-03-29 02:56:56,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 04:57:52] 2026-03-29 02:56:56,151 | INFO     | fitting pss+swap vs Time
[2026-03-29 04:57:52] 2026-03-29 02:56:56,152 | INFO     | sum of square deviations: 38993289250.0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,158 | INFO     | sum of deviations: 195346471919.00003
[2026-03-29 04:57:52] 2026-03-29 02:56:56,159 | INFO     | mean x: 1774737705.0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,159 | INFO     | mean y: 2488088.862275449
[2026-03-29 04:57:52] 2026-03-29 02:56:56,159 | INFO     | intersect: -8888496896.544489
[2026-03-29 04:57:52] 2026-03-29 02:56:56,163 | INFO     | chi2: 6.560232745937618
[2026-03-29 04:57:52] 2026-03-29 02:56:56,164 | INFO     | sum of square deviations: 37837435020.0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,170 | INFO     | sum of deviations: 226357255998.50003
[2026-03-29 04:57:52] 2026-03-29 02:56:56,171 | INFO     | mean x: 1774737552.5
[2026-03-29 04:57:52] 2026-03-29 02:56:56,171 | INFO     | mean y: 2492144.4657258065
[2026-03-29 04:57:52] 2026-03-29 02:56:56,171 | INFO     | intersect: -10614631407.621023
[2026-03-29 04:57:52] 2026-03-29 02:56:56,172 | INFO     | chi2: 5.811976515719628
[2026-03-29 04:57:52] 2026-03-29 02:56:56,172 | INFO     | current chi2=5.811976515719628 (change=11.4059402950504 %)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,172 | INFO     | right removable region: 495
[2026-03-29 04:57:52] 2026-03-29 02:56:56,173 | INFO     | sum of square deviations: 37837435020.0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,180 | INFO     | sum of deviations: 16806197595.999992
[2026-03-29 04:57:52] 2026-03-29 02:56:56,181 | INFO     | mean x: 1774737857.5
[2026-03-29 04:57:52] 2026-03-29 02:56:56,181 | INFO     | mean y: 2511637.0282258065
[2026-03-29 04:57:52] 2026-03-29 02:56:56,181 | INFO     | intersect: -785771054.3984268
[2026-03-29 04:57:52] 2026-03-29 02:56:56,185 | INFO     | chi2: 1.916983371835985
[2026-03-29 04:57:52] 2026-03-29 02:56:56,185 | INFO     | current chi2=1.916983371835985 (change=70.7787292604357 %)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,186 | INFO     | sum of square deviations: 36704650990.0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,193 | INFO     | sum of deviations: -49841302757.0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,193 | INFO     | mean x: 1774738010.0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,193 | INFO     | mean y: 2520574.521384929
[2026-03-29 04:57:52] 2026-03-29 02:56:56,193 | INFO     | intersect: 2412440082.947303
[2026-03-29 04:57:52] 2026-03-29 02:56:56,197 | INFO     | chi2: 0.9702128666200063
[2026-03-29 04:57:52] 2026-03-29 02:56:56,197 | INFO     | current chi2=0.9702128666200063 (change=49.388561169897486 %)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,198 | INFO     | sum of square deviations: 35594704597.5
[2026-03-29 04:57:52] 2026-03-29 02:56:56,205 | INFO     | sum of deviations: -57368303206.99999
[2026-03-29 04:57:52] 2026-03-29 02:56:56,205 | INFO     | mean x: 1774738162.5
[2026-03-29 04:57:52] 2026-03-29 02:56:56,205 | INFO     | mean y: 2521608.641975309
[2026-03-29 04:57:52] 2026-03-29 02:56:56,205 | INFO     | intersect: 2862882950.887387
[2026-03-29 04:57:52] 2026-03-29 02:56:56,209 | INFO     | chi2: 0.9594474611424914
[2026-03-29 04:57:52] 2026-03-29 02:56:56,209 | INFO     | current chi2=0.9594474611424914 (change=1.1095921161114948 %)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,209 | INFO     | left removable region: 30
[2026-03-29 04:57:52] 2026-03-29 02:56:56,210 | INFO     | sum of square deviations: 31177068280.0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,216 | INFO     | sum of deviations: 7799286760.000006
[2026-03-29 04:57:52] 2026-03-29 02:56:56,216 | INFO     | mean x: 1774738437.0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,217 | INFO     | mean y: 2521276.623655914
[2026-03-29 04:57:52] 2026-03-29 02:56:56,217 | INFO     | intersect: -441449075.8753509
[2026-03-29 04:57:52] 2026-03-29 02:56:56,217 | INFO     | chi2: 0.09963691245028851
[2026-03-29 04:57:52] 2026-03-29 02:56:56,221 | INFO     | current memory leak: 0.25 B/s (using 465 data points, chi2=0.10)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | could have reported an average CPU frequency of 2249 MHz (21 samples)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | ..............................
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | . Timing measurements:
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | . get job = 0 s
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | . initial setup = 99 s
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | . payload setup = 156 s
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | . stage-in = 0 s
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | . payload execution = 30665 s
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | . stage-out = 5 s
[2026-03-29 04:57:52] 2026-03-29 02:56:56,222 | INFO     | . log creation = 1 s
[2026-03-29 04:57:52] 2026-03-29 02:56:56,223 | INFO     | ..............................
[2026-03-29 04:57:52] 2026-03-29 02:56:56,248 | INFO     | time since job start (30848s) is within the limit (345600.0s)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,345 | INFO     | 
[2026-03-29 04:57:52] 2026-03-29 02:56:56,345 | INFO     | job summary report
[2026-03-29 04:57:52] 2026-03-29 02:56:56,345 | INFO     | --------------------------------------------------
[2026-03-29 04:57:52] 2026-03-29 02:56:56,345 | INFO     | PanDA job id: 7071865958
[2026-03-29 04:57:52] 2026-03-29 02:56:56,345 | INFO     | task id: 49176589
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | errors: (none)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | pilot state: finished 
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | transexitcode: 0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | exeerrorcode: 0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | exeerrordiag: 
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | exitcode: 0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | exitmsg: OK
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | cpuconsumptiontime: 118473 s
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | nevents: 400
[2026-03-29 04:57:52] 2026-03-29 02:56:56,346 | INFO     | neventsw: 0
[2026-03-29 04:57:52] 2026-03-29 02:56:56,347 | INFO     | pid: 20384
[2026-03-29 04:57:52] 2026-03-29 02:56:56,347 | INFO     | pgrp: 20384
[2026-03-29 04:57:52] 2026-03-29 02:56:56,347 | INFO     | corecount: 8
[2026-03-29 04:57:52] 2026-03-29 02:56:56,347 | INFO     | event service: False
[2026-03-29 04:57:52] 2026-03-29 02:56:56,347 | INFO     | sizes: {0: 2279748, 1: 2279832, 2: 2280293, 12: 2280293, 30826: 2318388, 30833: 2327388, 30834: 2327572, 30836: 2327766}
[2026-03-29 04:57:52] 2026-03-29 02:56:56,347 | INFO     | --------------------------------------------------
[2026-03-29 04:57:52] 2026-03-29 02:56:56,347 | INFO     | 
[2026-03-29 04:57:52] 2026-03-29 02:56:56,347 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-29 04:57:52] 2026-03-29 02:56:56,855 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,855 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,855 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,856 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,857 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,857 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 04:57:52] 2026-03-29 02:56:56,858 | INFO     | job 7071865958 has completed (purged errors)
[2026-03-29 04:57:52] 2026-03-29 02:56:56,858 | INFO     | overall cleanup function is called
[2026-03-29 04:57:52] 2026-03-29 02:56:57,866 | INFO     | --- collectZombieJob: --- 10, [20384]
[2026-03-29 04:57:52] 2026-03-29 02:56:57,867 | INFO     | zombie collector waiting for pid 20384
[2026-03-29 04:57:52] 2026-03-29 02:56:57,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 04:57:52] 2026-03-29 02:56:57,867 | INFO     | collected zombie processes
[2026-03-29 04:57:52] 2026-03-29 02:56:57,867 | INFO     | will attempt to kill all subprocesses of pid=20384
[2026-03-29 04:57:52] 2026-03-29 02:56:57,999 | INFO     | process IDs to be killed: [20384] (in reverse order)
[2026-03-29 04:57:52] 2026-03-29 02:56:58,521 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 04:57:52] 2026-03-29 02:56:58,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 04:57:52] 2026-03-29 02:56:58,525 | INFO     | did not find any defunct processes belonging to 20384
[2026-03-29 04:57:52] 2026-03-29 02:56:58,528 | INFO     | did not find any defunct processes belonging to 20384
[2026-03-29 04:57:52] 2026-03-29 02:56:58,528 | INFO     | ready for new job
[2026-03-29 04:57:52] 2026-03-29 02:56:58,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 04:57:52] 2026-03-29 02:56:58,531 | INFO     | **************************************
[2026-03-29 04:57:52] 2026-03-29 02:56:58,540 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 04:57:52] 2026-03-29 02:56:58,540 | INFO     | **************************************
[2026-03-29 04:57:52] 2026-03-29 02:56:58,540 | INFO     | 
[2026-03-29 04:57:52] 2026-03-29 02:56:58,541 | INFO     | pilot is running in a VM
[2026-03-29 04:57:52] 2026-03-29 02:56:58,541 | INFO     | architecture information:
[2026-03-29 04:57:52] 2026-03-29 02:56:58,556 | INFO     | executing command: cat /etc/os-release
[2026-03-29 04:57:52] 2026-03-29 02:56:58,794 | INFO     | cat /etc/os-release:
[2026-03-29 04:57:52] NAME="CentOS Linux"
[2026-03-29 04:57:52] VERSION="7 (Core)"
[2026-03-29 04:57:52] ID="centos"
[2026-03-29 04:57:52] ID_LIKE="rhel fedora"
[2026-03-29 04:57:52] VERSION_ID="7"
[2026-03-29 04:57:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 04:57:52] ANSI_COLOR="0;31"
[2026-03-29 04:57:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 04:57:52] HOME_URL="https://www.centos.org/"
[2026-03-29 04:57:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 04:57:52] 
[2026-03-29 04:57:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 04:57:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 04:57:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 04:57:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 04:57:52] 
[2026-03-29 04:57:52] 2026-03-29 02:56:58,794 | INFO     | **************************************
[2026-03-29 04:57:52] 2026-03-29 02:56:59,298 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-29 04:57:52] 2026-03-29 02:56:59,440 | INFO     | sufficient remaining disk space (496587767808 B)
[2026-03-29 04:57:52] 2026-03-29 02:56:59,441 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 04:57:52] 2026-03-29 02:56:59,441 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 04:57:52] 2026-03-29 02:56:59,441 | INFO     | update_server=False
[2026-03-29 04:57:52] 2026-03-29 02:56:59,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 04:57:52] 2026-03-29 02:56:59,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 04:57:52] 2026-03-29 02:56:59,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 04:57:52] 2026-03-29 02:56:59,449 | INFO     | aborting loop
[2026-03-29 04:57:52] 2026-03-29 02:56:59,455 | INFO     | all data control threads have been joined
[2026-03-29 04:57:52] 2026-03-29 02:56:59,507 | INFO     | all payload control threads have been joined
[2026-03-29 04:57:52] 2026-03-29 02:56:59,896 | INFO     | all job control threads have been joined
[2026-03-29 04:57:52] 2026-03-29 02:57:00,447 | INFO     | [job] retrieve thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:00,455 | INFO     | [job] job monitor thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:00,462 | INFO     | [data] control thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:00,465 | INFO     | [payload] validate_post thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:00,514 | INFO     | [payload] control thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:00,686 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:00,825 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:00,903 | INFO     | [job] control thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:00,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 04:57:52] 2026-03-29 02:57:01,015 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:01,039 | INFO     | [payload] failed_post thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:01,302 | INFO     | [job] validate thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:01,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 04:57:52] 2026-03-29 02:57:01,449 | INFO     | [data] copytool_out thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:01,799 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:01,803 | INFO     | [data] copytool_in thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:02,364 | INFO     | [job] queue monitor thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:04,993 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 04:57:52] 2026-03-29 02:57:29,428 | INFO     | PID=15891 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-29 04:57:52] 2026-03-29 02:57:29,428 | INFO     | .. there are 9 such processes running
[2026-03-29 04:57:52] 2026-03-29 02:57:29,429 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 04:57:52] 2026-03-29 02:57:29,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 04:57:52] 2026-03-29 02:57:29,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 04:57:52] 2026-03-29 02:57:41,583 | INFO     | [monitor] cgroup control has ended
[2026-03-29 04:57:52] 2026-03-29 02:57:42,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626273929024)>', '<ExcThread(monitor, started 140625970173696)>']
[2026-03-29 04:57:52] 2026-03-29 02:57:43,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 04:57:52] 2026-03-29 02:57:43,511 | INFO     | [monitor] control thread has ended
[2026-03-29 04:57:52] 2026-03-29 02:57:47,624 | INFO     | all workflow threads have been joined
[2026-03-29 04:57:52] 2026-03-29 02:57:47,625 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 04:57:52] 2026-03-29 02:57:47,625 | INFO     | traces error code: 0
[2026-03-29 04:57:52] 2026-03-29 02:57:47,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 04:57:52] 2026-03-29 02:57:48,069 [wrapper] ==== pilot stdout END ====
[2026-03-29 04:57:52] 2026-03-29 02:57:48,112 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 04:57:52] 2026-03-29 02:57:48,161 [wrapper] pilotpid: 15891
[2026-03-29 04:57:52] 2026-03-29 02:57:48,212 [wrapper] Pilot exit status: 0
[2026-03-29 04:57:52] 2026-03-29 02:57:48,682 [wrapper] pandaids: 7071865958
[2026-03-29 04:57:52] 2026-03-29 02:57:49,333 [wrapper] cleanup supervisor_pilot 11144 15892
[2026-03-29 04:57:52] 2026-03-29 02:57:49,426 [wrapper] Test setup, not cleaning
[2026-03-29 04:57:52] 2026-03-29 02:57:49,518 [wrapper] apfmon messages muted
[2026-03-29 04:57:52] 2026-03-29 02:57:49,622 [wrapper] ==== wrapper stdout END ====
[2026-03-29 04:57:52] 2026-03-29 02:57:49,714 [wrapper] ==== wrapper stderr END ====
[2026-03-29 04:57:52]  *** Error codes and diagnostics ***
[2026-03-29 04:57:52]     "exeErrorCode": 0,
[2026-03-29 04:57:52]     "exeErrorDiag": "",
[2026-03-29 04:57:52]     "pilotErrorCode": 0,
[2026-03-29 04:57:52]     "pilotErrorDiag": "",
[2026-03-29 04:57:52]  *** Listing of results directory ***
[2026-03-29 04:57:52] total 476208
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc    585013 Mar 28 06:04 pilot3.tar.gz
[2026-03-29 04:57:52] -rwx------. 1 boinc boinc     36322 Mar 28 06:08 runpilot2-wrapper.sh
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc      5118 Mar 28 06:09 queuedata.json
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc       100 Mar 28 19:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 04:57:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar 28 19:17 run_atlas
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc       105 Mar 28 19:17 job.xml
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc      6391 Mar 28 19:17 init_data.xml
[2026-03-29 04:57:52] -rw-r--r--. 2 boinc boinc 243393896 Mar 28 19:17 EVNT.49134465._000006.pool.root.1
[2026-03-29 04:57:52] -rw-r--r--. 2 boinc boinc     15845 Mar 28 19:17 start_atlas.sh
[2026-03-29 04:57:52] drwxrwx--x. 2 boinc boinc        68 Mar 28 19:17 shared
[2026-03-29 04:57:52] -rw-r--r--. 2 boinc boinc    597540 Mar 28 19:17 input.tar.gz
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc         0 Mar 28 19:17 boinc_lockfile
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc      2599 Mar 28 19:17 pandaJob.out
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc       415 Mar 28 19:22 workernode_map.json
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc   1004063 Mar 28 19:22 agis_schedconf.cvmfs.json
[2026-03-29 04:57:52] drwx------. 5 boinc boinc      4096 Mar 28 19:22 pilot3
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc 230423405 Mar 29 04:55 HITS.49176589._000442.pool.root.1
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc       532 Mar 29 04:55 boinc_task_state.xml
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc      1017 Mar 29 04:56 memory_monitor_summary.json
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc   1511579 Mar 29 04:56 agis_ddmendpoints.agis.ALL.json
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc    691878 Mar 29 04:56 log.49176589._000442.job.log.tgz.1
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc      6315 Mar 29 04:56 heartbeat.json
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc        95 Mar 29 04:57 pilot_heartbeat.json
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc      8192 Mar 29 04:57 boinc_mmap_file
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc        29 Mar 29 04:57 wrapper_checkpoint.txt
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc      4881 Mar 29 04:57 pilotlog.txt
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc   4256567 Mar 29 04:57 log.49176589._000442.job.log.1
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc       357 Mar 29 04:57 output.list
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc       620 Mar 29 04:57 runtime_log
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc   4966400 Mar 29 04:57 result.tar.gz
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc      8832 Mar 29 04:57 runtime_log.err
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc       658 Mar 29 04:57 6HDNDmn5aQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmMYJKDmeWWWhm.diag
[2026-03-29 04:57:52] -rw-r--r--. 1 boinc boinc     20743 Mar 29 04:57 stderr.txt
[2026-03-29 04:57:52] HITS file was successfully produced:
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc 230423405 Mar 29 04:55 shared/HITS.pool.root.1
[2026-03-29 04:57:52]  *** Contents of shared directory: ***
[2026-03-29 04:57:52] total 468168
[2026-03-29 04:57:52] -rw-r--r--. 2 boinc boinc 243393896 Mar 28 19:17 ATLAS.root_0
[2026-03-29 04:57:52] -rw-r--r--. 2 boinc boinc     15845 Mar 28 19:17 start_atlas.sh
[2026-03-29 04:57:52] -rw-r--r--. 2 boinc boinc    597540 Mar 28 19:17 input.tar.gz
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc 230423405 Mar 29 04:55 HITS.pool.root.1
[2026-03-29 04:57:52] -rw-------. 1 boinc boinc   4966400 Mar 29 04:57 result.tar.gz
04:57:53 (11818): run_atlas exited; CPU time 118946.857501
04:57:53 (11818): called boinc_finish(0)

</stderr_txt>
]]>

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