Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:25:28 (1360125): wrapper (7.7.26015): starting
20:25:28 (1360125): wrapper: running run_atlas (--nthreads 12)
[2026-03-28 20:25:28] Arguments: --nthreads 12
[2026-03-28 20:25:28] Threads: 12
[2026-03-28 20:25:28] Checking for CVMFS
[2026-03-28 20:25:28] No cvmfs_config command found, will try listing directly
[2026-03-28 20:25:28] CVMFS is ok
[2026-03-28 20:25:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-28 20:25:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-28 20:25:28] Further information can be found at the LHC@home message board.
[2026-03-28 20:25:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 20:25:28] Checking for apptainer binary...
[2026-03-28 20:25:28] which: no apptainer in ((null))
[2026-03-28 20:25:28] apptainer is not installed, using version from CVMFS
[2026-03-28 20:25:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 20:25:28] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot168/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-28 20:25:28] apptainer works
[2026-03-28 20:25:28] Set ATHENA_PROC_NUMBER=12
[2026-03-28 20:25:28] Set ATHENA_CORE_NUMBER=12
[2026-03-28 20:25:28] Starting ATLAS job with PandaID=7071866183
[2026-03-28 20:25:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot168/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-28 21:27:52]  *** The last 200 lines of the pilot log: ***
[2026-03-28 21:27:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-28 21:27:52]  is_altstaged=None
[2026-03-28 21:27:52]  is_tar=False
[2026-03-28 21:27:52]  lfn=log.49176616._001424.job.log.tgz.1
[2026-03-28 21:27:52]  mtime=0
[2026-03-28 21:27:52]  protocol_id=None
[2026-03-28 21:27:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-28 21:27:52]  replicas=None
[2026-03-28 21:27:52]  scope=mc23_13p6TeV
[2026-03-28 21:27:52]  status=None
[2026-03-28 21:27:52]  status_code=0
[2026-03-28 21:27:52]  storage_token=
[2026-03-28 21:27:52]  surl=/var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7071866183/log.49176616._001424.job.log.tgz.1
[2026-03-28 21:27:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/01/log.49176616._001424.job.log.tgz.1
[2026-03-28 21:27:52]  workdir=None
[2026-03-28 21:27:52] ]
[2026-03-28 21:27:52] 2026-03-28 20:27:05,530 | INFO     | transferring file log.49176616._001424.job.log.tgz.1 from /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7071866183/log.49176616._001424.job.log.tgz.1 to /var/lib/
[2026-03-28 21:27:52] 2026-03-28 20:27:05,530 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7071866183/log.49176616._001424.job.log.tgz.1 /var/lib/boinc/var/slot168/slots/1/
[2026-03-28 21:27:52] 2026-03-28 20:27:05,545 | INFO     | adding to output.list: log.49176616._001424.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/01/log.49176616._001424.job.log.tg
[2026-03-28 21:27:52] 2026-03-28 20:27:05,545 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-28 21:27:52] 2026-03-28 20:27:05,546 | INFO     | summary of transferred files:
[2026-03-28 21:27:52] 2026-03-28 20:27:05,546 | INFO     |  -- lfn=log.49176616._001424.job.log.tgz.1, status_code=0, status=transferred
[2026-03-28 21:27:52] 2026-03-28 20:27:05,546 | INFO     | stage-out finished correctly
[2026-03-28 21:27:52] 2026-03-28 20:27:06,843 | INFO     | monitor loop #273: job 0:7071866183 is in state 'finished'
[2026-03-28 21:27:52] 2026-03-28 20:27:06,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-28 21:27:52] 2026-03-28 20:27:07,332 | INFO     | time since job start (3687s) is within the limit (345600.0s)
[2026-03-28 21:27:52] 2026-03-28 20:27:07,453 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-28 21:27:52] 2026-03-28 20:27:08,960 | INFO     | job 7071866183 has state=finished
[2026-03-28 21:27:52] 2026-03-28 20:27:08,961 | INFO     | preparing for final server update for job 7071866183 in state='finished'
[2026-03-28 21:27:52] 2026-03-28 20:27:08,961 | INFO     | reading metadata from: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7071866183/jobReport.json
[2026-03-28 21:27:52] 2026-03-28 20:27:08,962 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot168/slots/1/workernode_map.json
[2026-03-28 21:27:52] 2026-03-28 20:27:08,962 | INFO     | this job has now completed (state=finished)
[2026-03-28 21:27:52] 2026-03-28 20:27:08,962 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-28 21:27:52] 2026-03-28 20:27:08,962 | INFO     | log transfer has been attempted: DONE
[2026-03-28 21:27:52] 2026-03-28 20:27:08,962 | INFO     | job 7071866183 has finished - writing final server update
[2026-03-28 21:27:52] 2026-03-28 20:27:08,963 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3616411/.job.ad'
[2026-03-28 21:27:52] 2026-03-28 20:27:08,963 | INFO     | total number of processed events: 400 (read)
[2026-03-28 21:27:52] 2026-03-28 20:27:08,979 | INFO     | using path: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7071866183/memory_monitor_summary.json (trf name=prmon)
[2026-03-28 21:27:52] 2026-03-28 20:27:08,980 | INFO     | extracted standard info from prmon json
[2026-03-28 21:27:52] 2026-03-28 20:27:08,980 | INFO     | extracted standard memory fields from prmon json
[2026-03-28 21:27:52] 2026-03-28 20:27:08,980 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-28 21:27:52] 2026-03-28 20:27:08,980 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-28 21:27:52] 2026-03-28 20:27:08,980 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | fitting pss+swap vs Time
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | sum of square deviations: 46147842.0
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | sum of deviations: -827253330.0
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | mean x: 1774727854.0
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | mean y: 2751348.2075471696
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | intersect: 31816796457.082924
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | chi2: 0.0008156062784377505
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | current memory leak: -17.93 B/s (using 53 data points, chi2=0.00)
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | could have reported an average CPU frequency of 3579 MHz (6 samples)
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | ..............................
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | . Timing measurements:
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | . get job = 0 s
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | . initial setup = 4 s
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | . payload setup = 7 s
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | . stage-in = 0 s
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | . payload execution = 3662 s
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | . stage-out = 0 s
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | . log creation = 0 s
[2026-03-28 21:27:52] 2026-03-28 20:27:08,981 | INFO     | ..............................
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | 
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | job summary report
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | --------------------------------------------------
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | PanDA job id: 7071866183
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | task id: 49176616
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | errors: (none)
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | pilot state: finished 
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | transexitcode: 0
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | exeerrorcode: 0
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | exeerrordiag: 
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | exitcode: 0
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | exitmsg: OK
[2026-03-28 21:27:52] 2026-03-28 20:27:09,298 | INFO     | cpuconsumptiontime: 40729 s
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | nevents: 400
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | neventsw: 0
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | pid: 1370790
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | pgrp: 1370790
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | corecount: 12
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | event service: False
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | sizes: {0: 2280247, 11: 2280247, 3673: 2315084, 3675: 2315084, 3677: 2315278}
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | --------------------------------------------------
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | 
[2026-03-28 21:27:52] 2026-03-28 20:27:09,299 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot168/slots/1
[2026-03-28 21:27:52] 2026-03-28 20:27:09,320 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,320 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,320 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,320 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | job 7071866183 has completed (purged errors)
[2026-03-28 21:27:52] 2026-03-28 20:27:09,321 | INFO     | overall cleanup function is called
[2026-03-28 21:27:52] 2026-03-28 20:27:10,328 | INFO     | --- collectZombieJob: --- 10, [1370790]
[2026-03-28 21:27:52] 2026-03-28 20:27:10,328 | INFO     | zombie collector waiting for pid 1370790
[2026-03-28 21:27:52] 2026-03-28 20:27:10,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-28 21:27:52] 2026-03-28 20:27:10,328 | INFO     | collected zombie processes
[2026-03-28 21:27:52] 2026-03-28 20:27:10,329 | INFO     | will attempt to kill all subprocesses of pid=1370790
[2026-03-28 21:27:52] 2026-03-28 20:27:10,688 | INFO     | process IDs to be killed: [1370790] (in reverse order)
[2026-03-28 21:27:52] 2026-03-28 20:27:10,842 | WARNING  | found no corresponding commands to process id(s)
[2026-03-28 21:27:52] 2026-03-28 20:27:10,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-28 21:27:52] 2026-03-28 20:27:10,867 | INFO     | did not find any defunct processes belonging to 1370790
[2026-03-28 21:27:52] 2026-03-28 20:27:10,889 | INFO     | did not find any defunct processes belonging to 1370790
[2026-03-28 21:27:52] 2026-03-28 20:27:10,890 | INFO     | ready for new job
[2026-03-28 21:27:52] 2026-03-28 20:27:10,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-28 21:27:52] 2026-03-28 20:27:10,891 | INFO     | **************************************
[2026-03-28 21:27:52] 2026-03-28 20:27:10,891 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-28 21:27:52] 2026-03-28 20:27:10,891 | INFO     | **************************************
[2026-03-28 21:27:52] 2026-03-28 20:27:10,891 | INFO     | 
[2026-03-28 21:27:52] 2026-03-28 20:27:10,896 | INFO     | architecture information:
[2026-03-28 21:27:52] 2026-03-28 20:27:10,897 | INFO     | executing command: cat /etc/os-release
[2026-03-28 21:27:52] 2026-03-28 20:27:10,908 | INFO     | cat /etc/os-release:
[2026-03-28 21:27:52] NAME="CentOS Linux"
[2026-03-28 21:27:52] VERSION="7 (Core)"
[2026-03-28 21:27:52] ID="centos"
[2026-03-28 21:27:52] ID_LIKE="rhel fedora"
[2026-03-28 21:27:52] VERSION_ID="7"
[2026-03-28 21:27:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-28 21:27:52] ANSI_COLOR="0;31"
[2026-03-28 21:27:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-28 21:27:52] HOME_URL="https://www.centos.org/"
[2026-03-28 21:27:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-28 21:27:52] 
[2026-03-28 21:27:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-28 21:27:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-28 21:27:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-28 21:27:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-28 21:27:52] 
[2026-03-28 21:27:52] 2026-03-28 20:27:10,908 | INFO     | **************************************
[2026-03-28 21:27:52] 2026-03-28 20:27:11,410 | INFO     | executing command: df -mP /var/lib/boinc/var/slot168/slots/1
[2026-03-28 21:27:52] 2026-03-28 20:27:11,422 | INFO     | sufficient remaining disk space (167944126464 B)
[2026-03-28 21:27:52] 2026-03-28 20:27:11,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-28 21:27:52] 2026-03-28 20:27:11,422 | INFO     | current server update state: UPDATING_FINAL
[2026-03-28 21:27:52] 2026-03-28 20:27:11,422 | INFO     | update_server=False
[2026-03-28 21:27:52] 2026-03-28 20:27:11,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-28 21:27:52] 2026-03-28 20:27:11,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-28 21:27:52] 2026-03-28 20:27:11,514 | INFO     | all job control threads have been joined
[2026-03-28 21:27:52] 2026-03-28 20:27:11,854 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-28 21:27:52] 2026-03-28 20:27:11,855 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-28 21:27:52] 2026-03-28 20:27:11,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-28 21:27:52] 2026-03-28 20:27:11,855 | INFO     | will abort loop
[2026-03-28 21:27:52] 2026-03-28 20:27:12,103 | INFO     | all payload control threads have been joined
[2026-03-28 21:27:52] 2026-03-28 20:27:12,427 | INFO     | [job] retrieve thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:12,460 | INFO     | [payload] validate_post thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:12,467 | INFO     | all data control threads have been joined
[2026-03-28 21:27:52] 2026-03-28 20:27:12,519 | INFO     | [job] control thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:12,860 | INFO     | [job] job monitor thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:13,108 | INFO     | [payload] control thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:13,141 | INFO     | [payload] failed_post thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:13,254 | INFO     | [job] validate thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:13,377 | INFO     | [job] create_data_payload thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:13,420 | INFO     | [payload] validate_pre thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:13,427 | INFO     | [data] copytool_out thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:13,476 | INFO     | [data] control thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:13,511 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-28 21:27:52] 2026-03-28 20:27:13,513 | INFO     | [payload] execute_payloads thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:13,594 | INFO     | [data] copytool_in thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:14,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-28 21:27:52] 2026-03-28 20:27:15,039 | INFO     | [job] queue monitor thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:17,516 | INFO     | [data] queue_monitor thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:21,485 | INFO     | job.realtimelogging is not enabled
[2026-03-28 21:27:52] 2026-03-28 20:27:22,490 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-28 21:27:52] 2026-03-28 20:27:40,902 | INFO     | PID=1364979 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-28 21:27:52] 2026-03-28 20:27:40,902 | INFO     | .. there are 15 such processes running
[2026-03-28 21:27:52] 2026-03-28 20:27:40,902 | INFO     | found 0 job(s) in 20 queues
[2026-03-28 21:27:52] 2026-03-28 20:27:40,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-28 21:27:52] 2026-03-28 20:27:40,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-28 21:27:52] 2026-03-28 20:27:46,522 | INFO     | [monitor] cgroup control has ended
[2026-03-28 21:27:52] 2026-03-28 20:27:47,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23418214410048)>', '<ExcThread(monitor, started 23417904424704)>']
[2026-03-28 21:27:52] 2026-03-28 20:27:47,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-28 21:27:52] 2026-03-28 20:27:47,937 | INFO     | [monitor] control thread has ended
[2026-03-28 21:27:52] 2026-03-28 20:27:52,033 | INFO     | all workflow threads have been joined
[2026-03-28 21:27:52] 2026-03-28 20:27:52,033 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-28 21:27:52] 2026-03-28 20:27:52,033 | INFO     | traces error code: 0
[2026-03-28 21:27:52] 2026-03-28 20:27:52,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-28 21:27:52] 2026-03-28 20:27:52,132 [wrapper] ==== pilot stdout END ====
[2026-03-28 21:27:52] 2026-03-28 20:27:52,134 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-28 21:27:52] 2026-03-28 20:27:52,136 [wrapper] pilotpid: 1364979
[2026-03-28 21:27:52] 2026-03-28 20:27:52,137 [wrapper] Pilot exit status: 0
[2026-03-28 21:27:52] 2026-03-28 20:27:52,144 [wrapper] pandaids: 7071866183
[2026-03-28 21:27:52] 2026-03-28 20:27:52,255 [wrapper] cleanup supervisor_pilot 1725603 1364980
[2026-03-28 21:27:52] 2026-03-28 20:27:52,257 [wrapper] Test setup, not cleaning
[2026-03-28 21:27:52] 2026-03-28 20:27:52,260 [wrapper] apfmon messages muted
[2026-03-28 21:27:52] 2026-03-28 20:27:52,262 [wrapper] ==== wrapper stdout END ====
[2026-03-28 21:27:52] 2026-03-28 20:27:52,263 [wrapper] ==== wrapper stderr END ====
[2026-03-28 21:27:52]  *** Error codes and diagnostics ***
[2026-03-28 21:27:52]     "exeErrorCode": 0,
[2026-03-28 21:27:52]     "exeErrorDiag": "",
[2026-03-28 21:27:52]     "pilotErrorCode": 0,
[2026-03-28 21:27:52]     "pilotErrorDiag": "",
[2026-03-28 21:27:52]  *** Listing of results directory ***
[2026-03-28 21:27:52] total 482540
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc    585013 Mar 28 06:04 pilot3.tar.gz
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc      5118 Mar 28 06:36 queuedata.json
[2026-03-28 21:27:52] -rwx------. 1 boinc boinc     36322 Mar 28 06:36 runpilot2-wrapper.sh
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc       100 Mar 28 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-28 21:27:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar 28 20:25 run_atlas
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc       105 Mar 28 20:25 job.xml
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc      6712 Mar 28 20:25 init_data.xml
[2026-03-28 21:27:52] -rw-r--r--. 2 boinc boinc 248113873 Mar 28 20:25 EVNT.49134569._000029.pool.root.1
[2026-03-28 21:27:52] -rw-r--r--. 2 boinc boinc     15845 Mar 28 20:25 start_atlas.sh
[2026-03-28 21:27:52] drwxrwx--x. 2 boinc boinc      4096 Mar 28 20:25 shared
[2026-03-28 21:27:52] -rw-r--r--. 2 boinc boinc    597566 Mar 28 20:25 input.tar.gz
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc         0 Mar 28 20:25 boinc_lockfile
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc      2604 Mar 28 20:25 pandaJob.out
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc   1003389 Mar 28 20:25 agis_schedconf.cvmfs.json
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc   1511579 Mar 28 20:25 agis_ddmendpoints.agis.ALL.json
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc       445 Mar 28 20:25 workernode_map.json
[2026-03-28 21:27:52] drwx------. 5 boinc boinc      4096 Mar 28 20:25 pilot3
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc 240229981 Mar 28 21:26 HITS.49176616._001424.pool.root.1
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc       529 Mar 28 21:26 boinc_task_state.xml
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc        95 Mar 28 21:26 pilot_heartbeat.json
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc      1027 Mar 28 21:27 memory_monitor_summary.json
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc    362037 Mar 28 21:27 log.49176616._001424.job.log.tgz.1
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc      6350 Mar 28 21:27 heartbeat.json
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc        27 Mar 28 21:27 wrapper_checkpoint.txt
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc      8192 Mar 28 21:27 boinc_mmap_file
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc      5089 Mar 28 21:27 pilotlog.txt
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc    560454 Mar 28 21:27 log.49176616._001424.job.log.1
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc       357 Mar 28 21:27 output.list
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc       620 Mar 28 21:27 runtime_log
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc    942080 Mar 28 21:27 result.tar.gz
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc      9223 Mar 28 21:27 runtime_log.err
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc       663 Mar 28 21:27 iNGMDmhWbQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDm6aJKDmhSh8Nn.diag
[2026-03-28 21:27:52] -rw-r--r--. 1 boinc boinc     21272 Mar 28 21:27 stderr.txt
[2026-03-28 21:27:52] HITS file was successfully produced:
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc 240229981 Mar 28 21:26 shared/HITS.pool.root.1
[2026-03-28 21:27:52]  *** Contents of shared directory: ***
[2026-03-28 21:27:52] total 478428
[2026-03-28 21:27:52] -rw-r--r--. 2 boinc boinc 248113873 Mar 28 20:25 ATLAS.root_0
[2026-03-28 21:27:52] -rw-r--r--. 2 boinc boinc     15845 Mar 28 20:25 start_atlas.sh
[2026-03-28 21:27:52] -rw-r--r--. 2 boinc boinc    597566 Mar 28 20:25 input.tar.gz
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc 240229981 Mar 28 21:26 HITS.pool.root.1
[2026-03-28 21:27:52] -rw-------. 1 boinc boinc    942080 Mar 28 21:27 result.tar.gz
21:27:54 (1360125): run_atlas exited; CPU time 40857.187276
21:27:54 (1360125): called boinc_finish(0)

</stderr_txt>
]]>

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