Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:55:04 (74553): wrapper (7.7.26015): starting
07:55:04 (74553): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 07:55:04] Arguments: --nthreads 12
[2026-04-04 07:55:04] Threads: 12
[2026-04-04 07:55:04] Checking for CVMFS
[2026-04-04 07:55:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 07:55:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 07:55:04] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 07:55:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 07:55:05] 2.13.3.0 3021178 14482 72404 158069 3 228 3778297 4096000 17330 130560 0 65701884 99.984 917511 2233 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-04 07:55:05] CVMFS is ok
[2026-04-04 07:55:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 07:55:05] Checking for apptainer binary...
[2026-04-04 07:55:05] apptainer is not installed, using version from CVMFS
[2026-04-04 07:55:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 07:55:06] epyc7v12
[2026-04-04 07:55:06] apptainer works
[2026-04-04 07:55:06] Set ATHENA_PROC_NUMBER=12
[2026-04-04 07:55:06] Set ATHENA_CORE_NUMBER=12
[2026-04-04 07:55:06] Starting ATLAS job with PandaID=7071889597
[2026-04-04 07:55:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 14:01:34]  *** The last 200 lines of the pilot log: ***
[2026-04-04 14:01:34] 2026-04-04 14:00:33,829 | INFO     | job 7071889597 has finished - writing final server update
[2026-04-04 14:01:34] 2026-04-04 14:00:33,830 | INFO     | total number of processed events: 400 (read)
[2026-04-04 14:01:34] 2026-04-04 14:00:33,907 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/0/PanDA_Pilot-7071889597/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 14:01:34] 2026-04-04 14:00:33,912 | INFO     | extracted standard info from prmon json
[2026-04-04 14:01:34] 2026-04-04 14:00:33,912 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 14:01:34] 2026-04-04 14:00:33,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 14:01:34] 2026-04-04 14:00:33,913 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 14:01:34] 2026-04-04 14:00:33,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 14:01:34] 2026-04-04 14:00:33,933 | INFO     | fitting pss+swap vs Time
[2026-04-04 14:01:34] 2026-04-04 14:00:33,935 | INFO     | sum of square deviations: 14227364617.488832
[2026-04-04 14:01:34] 2026-04-04 14:00:33,944 | INFO     | sum of deviations: 129156055208.69823
[2026-04-04 14:01:34] 2026-04-04 14:00:33,945 | INFO     | mean x: 1775300280.5055866
[2026-04-04 14:01:34] 2026-04-04 14:00:33,945 | INFO     | mean y: 2649142.150837989
[2026-04-04 14:01:34] 2026-04-04 14:00:33,945 | INFO     | intersect: -16113531697.07105
[2026-04-04 14:01:34] 2026-04-04 14:00:33,946 | INFO     | chi2: 3.0234715436671284
[2026-04-04 14:01:34] 2026-04-04 14:00:33,947 | INFO     | sum of square deviations: 13639530949.988762
[2026-04-04 14:01:34] 2026-04-04 14:00:33,952 | INFO     | sum of deviations: 154334576399.44745
[2026-04-04 14:01:34] 2026-04-04 14:00:33,955 | INFO     | time since job start (21882s) is within the limit (345600.0s)
[2026-04-04 14:01:34] 2026-04-04 14:00:33,955 | INFO     | mean x: 1775300128.0056658
[2026-04-04 14:01:34] 2026-04-04 14:00:33,955 | INFO     | mean y: 2655593.7762039662
[2026-04-04 14:01:34] 2026-04-04 14:00:33,956 | INFO     | intersect: -20085292755.93336
[2026-04-04 14:01:34] 2026-04-04 14:00:33,956 | INFO     | chi2: 2.138391005498432
[2026-04-04 14:01:34] 2026-04-04 14:00:33,956 | INFO     | current chi2=2.138391005498432 (change=29.273652005177937 %)
[2026-04-04 14:01:34] 2026-04-04 14:00:33,957 | INFO     | sum of square deviations: 13068116194.988474
[2026-04-04 14:01:34] 2026-04-04 14:00:33,966 | INFO     | sum of deviations: 151731111270.1722
[2026-04-04 14:01:34] 2026-04-04 14:00:33,966 | INFO     | mean x: 1775299975.505747
[2026-04-04 14:01:34] 2026-04-04 14:00:33,966 | INFO     | mean y: 2654898.9137931033
[2026-04-04 14:01:34] 2026-04-04 14:00:33,966 | INFO     | intersect: -20609974657.03531
[2026-04-04 14:01:34] 2026-04-04 14:00:33,967 | INFO     | chi2: 2.1374334824386922
[2026-04-04 14:01:34] 2026-04-04 14:00:33,967 | INFO     | current chi2=2.1374334824386922 (change=0.04477773509510396 %)
[2026-04-04 14:01:34] 2026-04-04 14:00:33,969 | INFO     | right removable region: 347
[2026-04-04 14:01:34] 2026-04-04 14:00:33,969 | INFO     | sum of square deviations: 13639529729.988762
[2026-04-04 14:01:34] 2026-04-04 14:00:33,977 | INFO     | sum of deviations: 50704211175.12741
[2026-04-04 14:01:34] 2026-04-04 14:00:33,978 | INFO     | mean x: 1775300433.0056658
[2026-04-04 14:01:34] 2026-04-04 14:00:33,978 | INFO     | mean y: 2669419.4362606234
[2026-04-04 14:01:34] 2026-04-04 14:00:33,978 | INFO     | intersect: -6596913545.400209
[2026-04-04 14:01:34] 2026-04-04 14:00:33,978 | INFO     | chi2: 1.1848193617193885
[2026-04-04 14:01:34] 2026-04-04 14:00:33,978 | INFO     | current chi2=1.1848193617193885 (change=60.81261739667849 %)
[2026-04-04 14:01:34] 2026-04-04 14:00:33,982 | INFO     | sum of square deviations: 13068113754.988472
[2026-04-04 14:01:34] 2026-04-04 14:00:33,987 | INFO     | sum of deviations: 22055004426.735653
[2026-04-04 14:01:34] 2026-04-04 14:00:33,987 | INFO     | mean x: 1775300585.505747
[2026-04-04 14:01:34] 2026-04-04 14:00:33,991 | INFO     | mean y: 2677060.382183908
[2026-04-04 14:01:34] 2026-04-04 14:00:33,991 | INFO     | intersect: -2993490788.0320024
[2026-04-04 14:01:34] 2026-04-04 14:00:33,992 | INFO     | chi2: 1.004034837567221
[2026-04-04 14:01:34] 2026-04-04 14:00:33,992 | INFO     | current chi2=1.004034837567221 (change=15.25840393845491 %)
[2026-04-04 14:01:34] 2026-04-04 14:00:33,992 | INFO     | left removable region: 20
[2026-04-04 14:01:34] 2026-04-04 14:00:33,992 | INFO     | sum of square deviations: 10842215397.987764
[2026-04-04 14:01:34] 2026-04-04 14:00:33,998 | INFO     | sum of deviations: 25811434222.773697
[2026-04-04 14:01:34] 2026-04-04 14:00:34,001 | INFO     | mean x: 1775300555.0061162
[2026-04-04 14:01:34] 2026-04-04 14:00:34,001 | INFO     | mean y: 2689906.113149847
[2026-04-04 14:01:34] 2026-04-04 14:00:34,001 | INFO     | intersect: -4223665300.7478423
[2026-04-04 14:01:34] 2026-04-04 14:00:34,002 | INFO     | chi2: 0.003038222299589041
[2026-04-04 14:01:34] 2026-04-04 14:00:34,002 | INFO     | current memory leak: 2.38 B/s (using 327 data points, chi2=0.00)
[2026-04-04 14:01:34] 2026-04-04 14:00:34,003 | INFO     | could have reported an average CPU frequency of 2377 MHz (16 samples)
[2026-04-04 14:01:34] 2026-04-04 14:00:34,004 | INFO     | ..............................
[2026-04-04 14:01:34] 2026-04-04 14:00:34,004 | INFO     | . Timing measurements:
[2026-04-04 14:01:34] 2026-04-04 14:00:34,004 | INFO     | . get job = 0 s
[2026-04-04 14:01:34] 2026-04-04 14:00:34,004 | INFO     | . initial setup = 14 s
[2026-04-04 14:01:34] 2026-04-04 14:00:34,004 | INFO     | . payload setup = 25 s
[2026-04-04 14:01:34] 2026-04-04 14:00:34,004 | INFO     | . stage-in = 0 s
[2026-04-04 14:01:34] 2026-04-04 14:00:34,005 | INFO     | . payload execution = 21843 s
[2026-04-04 14:01:34] 2026-04-04 14:00:34,005 | INFO     | . stage-out = 2 s
[2026-04-04 14:01:34] 2026-04-04 14:00:34,005 | INFO     | . log creation = 0 s
[2026-04-04 14:01:34] 2026-04-04 14:00:34,005 | INFO     | ..............................
[2026-04-04 14:01:34] 2026-04-04 14:00:34,446 | INFO     | 
[2026-04-04 14:01:34] 2026-04-04 14:00:34,446 | INFO     | job summary report
[2026-04-04 14:01:34] 2026-04-04 14:00:34,446 | INFO     | --------------------------------------------------
[2026-04-04 14:01:34] 2026-04-04 14:00:34,446 | INFO     | PanDA job id: 7071889597
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | task id: 49176114
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | errors: (none)
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | pilot state: finished 
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | transexitcode: 0
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | exeerrorcode: 0
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | exeerrordiag: 
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | exitcode: 0
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | exitmsg: OK
[2026-04-04 14:01:34] 2026-04-04 14:00:34,447 | INFO     | cpuconsumptiontime: 142533 s
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | nevents: 400
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | neventsw: 0
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | pid: 83756
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | pgrp: 83756
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | corecount: 12
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | event service: False
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | sizes: {0: 2279870, 1: 2280331, 21873: 2315109, 21874: 2315108, 21876: 2324208, 21877: 2324264, 21881: 2324586}
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | --------------------------------------------------
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | 
[2026-04-04 14:01:34] 2026-04-04 14:00:34,448 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-04-04 14:01:34] 2026-04-04 14:00:34,513 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,513 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,513 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,513 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,517 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 14:01:34] 2026-04-04 14:00:34,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,517 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 14:01:34] 2026-04-04 14:00:34,517 | INFO     | job 7071889597 has completed (purged errors)
[2026-04-04 14:01:34] 2026-04-04 14:00:34,517 | INFO     | overall cleanup function is called
[2026-04-04 14:01:34] 2026-04-04 14:00:35,534 | INFO     | --- collectZombieJob: --- 10, [83756]
[2026-04-04 14:01:34] 2026-04-04 14:00:35,534 | INFO     | zombie collector waiting for pid 83756
[2026-04-04 14:01:34] 2026-04-04 14:00:35,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 14:01:34] 2026-04-04 14:00:35,535 | INFO     | collected zombie processes
[2026-04-04 14:01:34] 2026-04-04 14:00:35,535 | INFO     | will attempt to kill all subprocesses of pid=83756
[2026-04-04 14:01:34] 2026-04-04 14:00:36,711 | INFO     | process IDs to be killed: [83756] (in reverse order)
[2026-04-04 14:01:34] 2026-04-04 14:00:37,140 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 14:01:34] 2026-04-04 14:00:37,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 14:01:34] 2026-04-04 14:00:37,176 | INFO     | did not find any defunct processes belonging to 83756
[2026-04-04 14:01:34] 2026-04-04 14:00:37,204 | INFO     | did not find any defunct processes belonging to 83756
[2026-04-04 14:01:34] 2026-04-04 14:00:37,206 | INFO     | ready for new job
[2026-04-04 14:01:34] 2026-04-04 14:00:37,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 14:01:34] 2026-04-04 14:00:37,213 | INFO     | **************************************
[2026-04-04 14:01:34] 2026-04-04 14:00:37,213 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 14:01:34] 2026-04-04 14:00:37,213 | INFO     | **************************************
[2026-04-04 14:01:34] 2026-04-04 14:00:37,213 | INFO     | 
[2026-04-04 14:01:34] 2026-04-04 14:00:37,234 | INFO     | architecture information:
[2026-04-04 14:01:34] 2026-04-04 14:00:37,238 | INFO     | executing command: cat /etc/os-release
[2026-04-04 14:01:34] 2026-04-04 14:00:37,282 | INFO     | cat /etc/os-release:
[2026-04-04 14:01:34] NAME="CentOS Linux"
[2026-04-04 14:01:34] VERSION="7 (Core)"
[2026-04-04 14:01:34] ID="centos"
[2026-04-04 14:01:34] ID_LIKE="rhel fedora"
[2026-04-04 14:01:34] VERSION_ID="7"
[2026-04-04 14:01:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 14:01:34] ANSI_COLOR="0;31"
[2026-04-04 14:01:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 14:01:34] HOME_URL="https://www.centos.org/"
[2026-04-04 14:01:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 14:01:34] 
[2026-04-04 14:01:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 14:01:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 14:01:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 14:01:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 14:01:34] 
[2026-04-04 14:01:34] 2026-04-04 14:00:37,282 | INFO     | **************************************
[2026-04-04 14:01:34] 2026-04-04 14:00:37,784 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-04-04 14:01:34] 2026-04-04 14:00:37,826 | INFO     | sufficient remaining disk space (348352675840 B)
[2026-04-04 14:01:34] 2026-04-04 14:00:37,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 14:01:34] 2026-04-04 14:00:37,826 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 14:01:34] 2026-04-04 14:00:37,826 | INFO     | update_server=False
[2026-04-04 14:01:34] 2026-04-04 14:00:37,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 14:01:34] 2026-04-04 14:00:37,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 14:01:34] 2026-04-04 14:00:37,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 14:01:34] 2026-04-04 14:00:37,829 | INFO     | aborting loop
[2026-04-04 14:01:34] 2026-04-04 14:00:37,880 | INFO     | all payload control threads have been joined
[2026-04-04 14:01:34] 2026-04-04 14:00:37,913 | INFO     | all job control threads have been joined
[2026-04-04 14:01:34] 2026-04-04 14:00:38,467 | INFO     | all data control threads have been joined
[2026-04-04 14:01:34] 2026-04-04 14:00:38,833 | INFO     | [job] retrieve thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:38,834 | INFO     | [job] job monitor thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:38,885 | INFO     | [payload] control thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:38,918 | INFO     | [job] control thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:38,988 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:38,990 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:39,089 | INFO     | [payload] validate_post thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:39,107 | INFO     | [payload] failed_post thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:39,155 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:39,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 14:01:34] 2026-04-04 14:00:39,472 | INFO     | [data] control thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:39,618 | INFO     | [data] copytool_in thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:39,630 | INFO     | [job] validate thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:39,834 | INFO     | [data] copytool_out thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:40,243 | INFO     | [job] queue monitor thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:40,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 14:01:34] 2026-04-04 14:00:44,704 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:00:47,901 | INFO     | job.realtimelogging is not enabled
[2026-04-04 14:01:34] 2026-04-04 14:00:48,906 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 14:01:34] 2026-04-04 14:01:08,382 | INFO     | PID=78768 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-04 14:01:34] 2026-04-04 14:01:08,382 | INFO     | .. there are 19 such processes running
[2026-04-04 14:01:34] 2026-04-04 14:01:08,384 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 14:01:34] 2026-04-04 14:01:08,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 14:01:34] 2026-04-04 14:01:08,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 14:01:34] 2026-04-04 14:01:27,576 | INFO     | [monitor] cgroup control has ended
[2026-04-04 14:01:34] 2026-04-04 14:01:29,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128273420826432)>', '<ExcThread(monitor, started 128272729884416)>']
[2026-04-04 14:01:34] 2026-04-04 14:01:29,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 14:01:34] 2026-04-04 14:01:29,493 | INFO     | [monitor] control thread has ended
[2026-04-04 14:01:34] 2026-04-04 14:01:34,168 | INFO     | all workflow threads have been joined
[2026-04-04 14:01:34] 2026-04-04 14:01:34,168 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 14:01:34] 2026-04-04 14:01:34,169 | INFO     | traces error code: 0
[2026-04-04 14:01:34] 2026-04-04 14:01:34,169 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 14:01:34] 2026-04-04 14:01:34,360 [wrapper] ==== pilot stdout END ====
[2026-04-04 14:01:34] 2026-04-04 14:01:34,370 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 14:01:34] 2026-04-04 14:01:34,382 [wrapper] pilotpid: 78768
[2026-04-04 14:01:34] 2026-04-04 14:01:34,398 [wrapper] Pilot exit status: 0
[2026-04-04 14:01:34] 2026-04-04 14:01:34,438 [wrapper] pandaids: 7071889597
[2026-04-04 14:01:34] 2026-04-04 14:01:34,595 [wrapper] cleanup supervisor_pilot  518881 78769
[2026-04-04 14:01:34] 2026-04-04 14:01:34,607 [wrapper] Test setup, not cleaning
[2026-04-04 14:01:34] 2026-04-04 14:01:34,616 [wrapper] apfmon messages muted
[2026-04-04 14:01:34] 2026-04-04 14:01:34,629 [wrapper] ==== wrapper stdout END ====
[2026-04-04 14:01:34] 2026-04-04 14:01:34,641 [wrapper] ==== wrapper stderr END ====
[2026-04-04 14:01:34]  *** Error codes and diagnostics ***
[2026-04-04 14:01:34]     "exeErrorCode": 0,
[2026-04-04 14:01:34]     "exeErrorDiag": "",
[2026-04-04 14:01:34]     "pilotErrorCode": 0,
[2026-04-04 14:01:34]     "pilotErrorDiag": "",
[2026-04-04 14:01:34]  *** Listing of results directory ***
[2026-04-04 14:01:34] total 503692
[2026-04-04 14:01:34] -rw-r--r-- 1 boinc boinc    585013 Mar 28 06:41 pilot3.tar.gz
[2026-04-04 14:01:34] -rwx------ 1 boinc boinc     36322 Mar 28 06:42 runpilot2-wrapper.sh
[2026-04-04 14:01:34] -rw-r--r-- 1 boinc boinc      5118 Mar 28 06:44 queuedata.json
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc       100 Apr  4 07:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 14:01:34] -rwxr-xr-x 1 boinc boinc      7986 Apr  4 07:55 run_atlas
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc       105 Apr  4 07:55 job.xml
[2026-04-04 14:01:34] -rw-r--r-- 2 boinc boinc 248684799 Apr  4 07:55 EVNT.49132616._000021.pool.root.1
[2026-04-04 14:01:34] -rw-r--r-- 2 boinc boinc     15845 Apr  4 07:55 start_atlas.sh
[2026-04-04 14:01:34] drwxrwx--x 2 boinc boinc      4096 Apr  4 07:55 shared
[2026-04-04 14:01:34] -rw-r--r-- 2 boinc boinc    597552 Apr  4 07:55 input.tar.gz
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc         0 Apr  4 07:55 boinc_setup_complete
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc      6555 Apr  4 07:55 init_data.xml
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc         0 Apr  4 07:55 boinc_lockfile
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc      2596 Apr  4 07:55 pandaJob.out
[2026-04-04 14:01:34] -rw------- 1 boinc boinc   1005165 Apr  4 07:55 agis_schedconf.cvmfs.json
[2026-04-04 14:01:34] -rw------- 1 boinc boinc       416 Apr  4 07:55 workernode_map.json
[2026-04-04 14:01:34] drwx------ 5 boinc boinc      4096 Apr  4 07:55 pilot3
[2026-04-04 14:01:34] -rw------- 1 boinc boinc 255916755 Apr  4 13:59 HITS.49176114._001730.pool.root.1
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc       532 Apr  4 13:59 boinc_task_state.xml
[2026-04-04 14:01:34] -rw------- 1 boinc boinc      1023 Apr  4 14:00 memory_monitor_summary.json
[2026-04-04 14:01:34] -rw------- 1 boinc boinc   1511579 Apr  4 14:00 agis_ddmendpoints.agis.ALL.json
[2026-04-04 14:01:34] -rw------- 1 boinc boinc    634292 Apr  4 14:00 log.49176114._001730.job.log.tgz.1
[2026-04-04 14:01:34] -rw------- 1 boinc boinc      6270 Apr  4 14:00 heartbeat.json
[2026-04-04 14:01:34] -rw------- 1 boinc boinc        95 Apr  4 14:01 pilot_heartbeat.json
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc      8192 Apr  4 14:01 boinc_mmap_file
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc        29 Apr  4 14:01 wrapper_checkpoint.txt
[2026-04-04 14:01:34] -rw------- 1 boinc boinc      4914 Apr  4 14:01 pilotlog.txt
[2026-04-04 14:01:34] -rw------- 1 boinc boinc   2987638 Apr  4 14:01 log.49176114._001730.job.log.1
[2026-04-04 14:01:34] -rw------- 1 boinc boinc       357 Apr  4 14:01 output.list
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc       620 Apr  4 14:01 runtime_log
[2026-04-04 14:01:34] -rw------- 1 boinc boinc   3635200 Apr  4 14:01 result.tar.gz
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc      9167 Apr  4 14:01 runtime_log.err
[2026-04-04 14:01:34] -rw------- 1 boinc boinc       658 Apr  4 14:01 QseNDmoYcQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmFqJKDmKFf9Sn.diag
[2026-04-04 14:01:34] -rw-rw-r-- 1 boinc boinc     20913 Apr  4 14:01 stderr.txt
[2026-04-04 14:01:34] HITS file was successfully produced:
[2026-04-04 14:01:34] -rw------- 1 boinc boinc 255916755 Apr  4 13:59 shared/HITS.pool.root.1
[2026-04-04 14:01:34]  *** Contents of shared directory: ***
[2026-04-04 14:01:35] total 496940
[2026-04-04 14:01:35] -rw-r--r-- 2 boinc boinc 248684799 Apr  4 07:55 ATLAS.root_0
[2026-04-04 14:01:35] -rw-r--r-- 2 boinc boinc     15845 Apr  4 07:55 start_atlas.sh
[2026-04-04 14:01:35] -rw-r--r-- 2 boinc boinc    597552 Apr  4 07:55 input.tar.gz
[2026-04-04 14:01:35] -rw------- 1 boinc boinc 255916755 Apr  4 13:59 HITS.pool.root.1
[2026-04-04 14:01:35] -rw------- 1 boinc boinc   3635200 Apr  4 14:01 result.tar.gz
14:01:37 (74553): run_atlas exited; CPU time 143886.784595
14:01:37 (74553): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN