Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:18:02 (3903119): wrapper (7.7.26015): starting
03:18:02 (3903119): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 03:18:02] Arguments: --nthreads 12
[2026-04-04 03:18:02] Threads: 12
[2026-04-04 03:18:02] Checking for CVMFS
[2026-04-04 03:18:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 03:18:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 03:18:04] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 03:18:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 03:18:05] 2.13.3.0 3021178 14205 74016 158063 0 90 3749038 4096001 16752 130560 0 64173483 99.984 909073 2221 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-04 03:18:05] CVMFS is ok
[2026-04-04 03:18:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 03:18:05] Checking for apptainer binary...
[2026-04-04 03:18:05] apptainer is not installed, using version from CVMFS
[2026-04-04 03:18:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 03:18:07] epyc7v12
[2026-04-04 03:18:07] apptainer works
[2026-04-04 03:18:07] Set ATHENA_PROC_NUMBER=12
[2026-04-04 03:18:07] Set ATHENA_CORE_NUMBER=12
[2026-04-04 03:18:07] Starting ATLAS job with PandaID=7071892275
[2026-04-04 03:18:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31428/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 07:52:29]  *** The last 200 lines of the pilot log: ***
[2026-04-04 07:52:29] 2026-04-04 07:51:44,967 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-04 07:52:29] 2026-04-04 07:51:44,967 | INFO     | log transfer has been attempted: DONE
[2026-04-04 07:52:29] 2026-04-04 07:51:44,967 | INFO     | job 7071892275 has finished - writing final server update
[2026-04-04 07:52:29] 2026-04-04 07:51:44,968 | INFO     | total number of processed events: 400 (read)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,081 | INFO     | using path: /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7071892275/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,082 | INFO     | extracted standard info from prmon json
[2026-04-04 07:52:29] 2026-04-04 07:51:45,082 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 07:52:29] 2026-04-04 07:51:45,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 07:52:29] 2026-04-04 07:51:45,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 07:52:29] 2026-04-04 07:51:45,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 07:52:29] 2026-04-04 07:51:45,106 | INFO     | fitting pss+swap vs Time
[2026-04-04 07:52:29] 2026-04-04 07:51:45,107 | INFO     | sum of square deviations: 5968646992.996246
[2026-04-04 07:52:29] 2026-04-04 07:51:45,111 | INFO     | sum of deviations: 36491598144.98132
[2026-04-04 07:52:29] 2026-04-04 07:51:45,111 | INFO     | mean x: 1775280917.5037313
[2026-04-04 07:52:29] 2026-04-04 07:51:45,111 | INFO     | mean y: 2655234.518656716
[2026-04-04 07:52:29] 2026-04-04 07:51:45,112 | INFO     | intersect: -10851201244.515478
[2026-04-04 07:52:29] 2026-04-04 07:51:45,114 | INFO     | chi2: 2.674259933163942
[2026-04-04 07:52:29] 2026-04-04 07:51:45,114 | INFO     | sum of square deviations: 5640771382.996167
[2026-04-04 07:52:29] 2026-04-04 07:51:45,117 | INFO     | sum of deviations: 55325119650.42204
[2026-04-04 07:52:29] 2026-04-04 07:51:45,117 | INFO     | mean x: 1775280765.0038023
[2026-04-04 07:52:29] 2026-04-04 07:51:45,119 | INFO     | mean y: 2663854.577946768
[2026-04-04 07:52:29] 2026-04-04 07:51:45,119 | INFO     | intersect: -17409426455.091476
[2026-04-04 07:52:29] 2026-04-04 07:51:45,120 | INFO     | chi2: 1.8401979381241858
[2026-04-04 07:52:29] 2026-04-04 07:51:45,120 | INFO     | current chi2=1.8401979381241858 (change=31.18851629553338 %)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,120 | INFO     | sum of square deviations: 5325128560.496128
[2026-04-04 07:52:29] 2026-04-04 07:51:45,125 | INFO     | sum of deviations: 53969377036.015526
[2026-04-04 07:52:29] 2026-04-04 07:51:45,126 | INFO     | mean x: 1775280612.503876
[2026-04-04 07:52:29] 2026-04-04 07:51:45,126 | INFO     | mean y: 2663199.484496124
[2026-04-04 07:52:29] 2026-04-04 07:51:45,126 | INFO     | intersect: -17989538797.611294
[2026-04-04 07:52:29] 2026-04-04 07:51:45,127 | INFO     | chi2: 1.8409485680646371
[2026-04-04 07:52:29] 2026-04-04 07:51:45,127 | INFO     | current chi2=1.8409485680646371 (change=-0.04079071739513762 %)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,127 | INFO     | right removable region: 257
[2026-04-04 07:52:29] 2026-04-04 07:51:45,128 | INFO     | sum of square deviations: 5640770772.996167
[2026-04-04 07:52:29] 2026-04-04 07:51:45,133 | INFO     | sum of deviations: -16677227385.133083
[2026-04-04 07:52:29] 2026-04-04 07:51:45,133 | INFO     | mean x: 1775281070.0038023
[2026-04-04 07:52:29] 2026-04-04 07:51:45,133 | INFO     | mean y: 2679827.133079848
[2026-04-04 07:52:29] 2026-04-04 07:51:45,134 | INFO     | intersect: 5251389138.050488
[2026-04-04 07:52:29] 2026-04-04 07:51:45,136 | INFO     | chi2: 1.033200840655877
[2026-04-04 07:52:29] 2026-04-04 07:51:45,136 | INFO     | current chi2=1.033200840655877 (change=61.36498072446206 %)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,137 | INFO     | sum of square deviations: 5325127340.496128
[2026-04-04 07:52:29] 2026-04-04 07:51:45,141 | INFO     | sum of deviations: -34519555896.434105
[2026-04-04 07:52:29] 2026-04-04 07:51:45,141 | INFO     | mean x: 1775281222.503876
[2026-04-04 07:52:29] 2026-04-04 07:51:45,141 | INFO     | mean y: 2688440.934108527
[2026-04-04 07:52:29] 2026-04-04 07:51:45,141 | INFO     | intersect: 11510754910.27096
[2026-04-04 07:52:29] 2026-04-04 07:51:45,142 | INFO     | chi2: 0.8810515507531846
[2026-04-04 07:52:29] 2026-04-04 07:51:45,142 | INFO     | current chi2=0.8810515507531846 (change=14.726012979829543 %)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,142 | INFO     | left removable region: 20
[2026-04-04 07:52:29] 2026-04-04 07:51:45,142 | INFO     | sum of square deviations: 4127759834.9957786
[2026-04-04 07:52:29] 2026-04-04 07:51:45,147 | INFO     | sum of deviations: -12546308281.16456
[2026-04-04 07:52:29] 2026-04-04 07:51:45,147 | INFO     | mean x: 1775281192.0042193
[2026-04-04 07:52:29] 2026-04-04 07:51:45,147 | INFO     | mean y: 2696644.164556962
[2026-04-04 07:52:29] 2026-04-04 07:51:45,147 | INFO     | intersect: 5398656198.740001
[2026-04-04 07:52:29] 2026-04-04 07:51:45,148 | INFO     | chi2: 0.02511723551365331
[2026-04-04 07:52:29] 2026-04-04 07:51:45,151 | INFO     | current memory leak: -3.04 B/s (using 237 data points, chi2=0.03)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,152 | INFO     | could have reported an average CPU frequency of 2395 MHz (13 samples)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,152 | INFO     | ..............................
[2026-04-04 07:52:29] 2026-04-04 07:51:45,152 | INFO     | . Timing measurements:
[2026-04-04 07:52:29] 2026-04-04 07:51:45,152 | INFO     | . get job = 0 s
[2026-04-04 07:52:29] 2026-04-04 07:51:45,152 | INFO     | . initial setup = 14 s
[2026-04-04 07:52:29] 2026-04-04 07:51:45,152 | INFO     | . payload setup = 24 s
[2026-04-04 07:52:29] 2026-04-04 07:51:45,152 | INFO     | . stage-in = 0 s
[2026-04-04 07:52:29] 2026-04-04 07:51:45,152 | INFO     | . payload execution = 16329 s
[2026-04-04 07:52:29] 2026-04-04 07:51:45,153 | INFO     | . stage-out = 1 s
[2026-04-04 07:52:29] 2026-04-04 07:51:45,153 | INFO     | . log creation = 0 s
[2026-04-04 07:52:29] 2026-04-04 07:51:45,153 | INFO     | ..............................
[2026-04-04 07:52:29] 2026-04-04 07:51:45,316 | INFO     | 
[2026-04-04 07:52:29] 2026-04-04 07:51:45,316 | INFO     | job summary report
[2026-04-04 07:52:29] 2026-04-04 07:51:45,316 | INFO     | --------------------------------------------------
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | PanDA job id: 7071892275
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | task id: 49180014
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | errors: (none)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | pilot state: finished 
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | transexitcode: 0
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | exeerrorcode: 0
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | exeerrordiag: 
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | exitcode: 0
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | exitmsg: OK
[2026-04-04 07:52:29] 2026-04-04 07:51:45,317 | INFO     | cpuconsumptiontime: 99592 s
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | nevents: 400
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | neventsw: 0
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | pid: 3923905
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | pgrp: 3923905
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | corecount: 12
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | event service: False
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | sizes: {0: 2280178, 1: 2280412, 16358: 2312525, 16359: 2312524, 16361: 2321624, 16364: 2321680, 16368: 2322002}
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | --------------------------------------------------
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | 
[2026-04-04 07:52:29] 2026-04-04 07:51:45,318 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-04 07:52:29] 2026-04-04 07:51:45,383 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,385 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,387 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,387 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 07:52:29] 2026-04-04 07:51:45,388 | INFO     | job 7071892275 has completed (purged errors)
[2026-04-04 07:52:29] 2026-04-04 07:51:45,388 | INFO     | overall cleanup function is called
[2026-04-04 07:52:29] 2026-04-04 07:51:46,405 | INFO     | --- collectZombieJob: --- 10, [3923905]
[2026-04-04 07:52:29] 2026-04-04 07:51:46,405 | INFO     | zombie collector waiting for pid 3923905
[2026-04-04 07:52:29] 2026-04-04 07:51:46,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 07:52:29] 2026-04-04 07:51:46,406 | INFO     | collected zombie processes
[2026-04-04 07:52:29] 2026-04-04 07:51:46,406 | INFO     | will attempt to kill all subprocesses of pid=3923905
[2026-04-04 07:52:29] 2026-04-04 07:51:47,109 | INFO     | process IDs to be killed: [3923905] (in reverse order)
[2026-04-04 07:52:29] 2026-04-04 07:51:47,533 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 07:52:29] 2026-04-04 07:51:47,534 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 07:52:29] 2026-04-04 07:51:47,552 | INFO     | did not find any defunct processes belonging to 3923905
[2026-04-04 07:52:29] 2026-04-04 07:51:47,569 | INFO     | did not find any defunct processes belonging to 3923905
[2026-04-04 07:52:29] 2026-04-04 07:51:47,569 | INFO     | ready for new job
[2026-04-04 07:52:29] 2026-04-04 07:51:47,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 07:52:29] 2026-04-04 07:51:47,572 | INFO     | **************************************
[2026-04-04 07:52:29] 2026-04-04 07:51:47,572 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 07:52:29] 2026-04-04 07:51:47,573 | INFO     | **************************************
[2026-04-04 07:52:29] 2026-04-04 07:51:47,573 | INFO     | 
[2026-04-04 07:52:29] 2026-04-04 07:51:47,582 | INFO     | architecture information:
[2026-04-04 07:52:29] 2026-04-04 07:51:47,583 | INFO     | executing command: cat /etc/os-release
[2026-04-04 07:52:29] 2026-04-04 07:51:47,611 | INFO     | cat /etc/os-release:
[2026-04-04 07:52:29] NAME="CentOS Linux"
[2026-04-04 07:52:29] VERSION="7 (Core)"
[2026-04-04 07:52:29] ID="centos"
[2026-04-04 07:52:29] ID_LIKE="rhel fedora"
[2026-04-04 07:52:29] VERSION_ID="7"
[2026-04-04 07:52:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 07:52:29] ANSI_COLOR="0;31"
[2026-04-04 07:52:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 07:52:29] HOME_URL="https://www.centos.org/"
[2026-04-04 07:52:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 07:52:29] 
[2026-04-04 07:52:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 07:52:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 07:52:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 07:52:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 07:52:29] 
[2026-04-04 07:52:29] 2026-04-04 07:51:47,612 | INFO     | **************************************
[2026-04-04 07:52:29] 2026-04-04 07:51:48,116 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-04 07:52:29] 2026-04-04 07:51:48,164 | INFO     | sufficient remaining disk space (339102138368 B)
[2026-04-04 07:52:29] 2026-04-04 07:51:48,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 07:52:29] 2026-04-04 07:51:48,165 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 07:52:29] 2026-04-04 07:51:48,165 | INFO     | update_server=False
[2026-04-04 07:52:29] 2026-04-04 07:51:48,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 07:52:29] 2026-04-04 07:51:48,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 07:52:29] 2026-04-04 07:51:48,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 07:52:29] 2026-04-04 07:51:48,167 | INFO     | aborting loop
[2026-04-04 07:52:29] 2026-04-04 07:51:48,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 07:52:29] 2026-04-04 07:51:48,811 | INFO     | all data control threads have been joined
[2026-04-04 07:52:29] 2026-04-04 07:51:48,999 | INFO     | all job control threads have been joined
[2026-04-04 07:52:29] 2026-04-04 07:51:49,170 | INFO     | [job] retrieve thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:49,172 | INFO     | [job] job monitor thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:49,283 | INFO     | [payload] failed_post thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:49,339 | INFO     | all payload control threads have been joined
[2026-04-04 07:52:29] 2026-04-04 07:51:49,421 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:49,498 | INFO     | [job] validate thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:49,516 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:49,579 | INFO     | [payload] validate_post thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:49,818 | INFO     | [data] control thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:50,004 | INFO     | [job] control thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:50,137 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:50,275 | INFO     | [data] copytool_out thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:50,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 07:52:29] 2026-04-04 07:51:50,344 | INFO     | [payload] control thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:50,384 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:50,517 | INFO     | [data] copytool_in thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:51,333 | INFO     | [job] queue monitor thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:51:52,171 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 07:52:29] 2026-04-04 07:52:17,663 | INFO     | PID=3910411 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-04 07:52:29] 2026-04-04 07:52:17,663 | INFO     | .. there are 20 such processes running
[2026-04-04 07:52:29] 2026-04-04 07:52:17,663 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 07:52:29] 2026-04-04 07:52:17,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 07:52:29] 2026-04-04 07:52:17,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 07:52:29] 2026-04-04 07:52:22,622 | INFO     | [monitor] cgroup control has ended
[2026-04-04 07:52:29] 2026-04-04 07:52:23,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129244052199232)>', '<ExcThread(monitor, started 129243501532928)>']
[2026-04-04 07:52:29] 2026-04-04 07:52:24,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 07:52:29] 2026-04-04 07:52:24,704 | INFO     | [monitor] control thread has ended
[2026-04-04 07:52:29] 2026-04-04 07:52:28,819 | INFO     | all workflow threads have been joined
[2026-04-04 07:52:29] 2026-04-04 07:52:28,819 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 07:52:29] 2026-04-04 07:52:28,820 | INFO     | traces error code: 0
[2026-04-04 07:52:29] 2026-04-04 07:52:28,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 07:52:29] 2026-04-04 07:52:28,988 [wrapper] ==== pilot stdout END ====
[2026-04-04 07:52:29] 2026-04-04 07:52:28,995 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 07:52:29] 2026-04-04 07:52:29,002 [wrapper] pilotpid: 3910411
[2026-04-04 07:52:29] 2026-04-04 07:52:29,008 [wrapper] Pilot exit status: 0
[2026-04-04 07:52:29] 2026-04-04 07:52:29,034 [wrapper] pandaids: 7071892275
[2026-04-04 07:52:29] 2026-04-04 07:52:29,169 [wrapper] cleanup supervisor_pilot   59591 3910412
[2026-04-04 07:52:29] 2026-04-04 07:52:29,175 [wrapper] Test setup, not cleaning
[2026-04-04 07:52:29] 2026-04-04 07:52:29,180 [wrapper] apfmon messages muted
[2026-04-04 07:52:29] 2026-04-04 07:52:29,186 [wrapper] ==== wrapper stdout END ====
[2026-04-04 07:52:29] 2026-04-04 07:52:29,191 [wrapper] ==== wrapper stderr END ====
[2026-04-04 07:52:29]  *** Error codes and diagnostics ***
[2026-04-04 07:52:29]     "exeErrorCode": 0,
[2026-04-04 07:52:29]     "exeErrorDiag": "",
[2026-04-04 07:52:29]     "pilotErrorCode": 0,
[2026-04-04 07:52:29]     "pilotErrorDiag": "",
[2026-04-04 07:52:29]  *** Listing of results directory ***
[2026-04-04 07:52:29] total 463360
[2026-04-04 07:52:29] -rwx------ 1 boinc boinc     36322 Mar 28 06:40 runpilot2-wrapper.sh
[2026-04-04 07:52:29] -rw-r--r-- 1 boinc boinc    585013 Mar 28 06:41 pilot3.tar.gz
[2026-04-04 07:52:29] -rw-r--r-- 1 boinc boinc      5118 Mar 28 06:41 queuedata.json
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc       100 Apr  4 03:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 07:52:29] -rwxr-xr-x 1 boinc boinc      7986 Apr  4 03:18 run_atlas
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc       105 Apr  4 03:18 job.xml
[2026-04-04 07:52:29] -rw-r--r-- 2 boinc boinc 237808230 Apr  4 03:18 EVNT.49132557._000005.pool.root.1
[2026-04-04 07:52:29] -rw-r--r-- 2 boinc boinc     15845 Apr  4 03:18 start_atlas.sh
[2026-04-04 07:52:29] drwxrwx--x 2 boinc boinc      4096 Apr  4 03:18 shared
[2026-04-04 07:52:29] -rw-r--r-- 2 boinc boinc    597571 Apr  4 03:18 input.tar.gz
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc      6555 Apr  4 03:18 init_data.xml
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc         0 Apr  4 03:18 boinc_setup_complete
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc         0 Apr  4 03:18 boinc_lockfile
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc      2674 Apr  4 03:18 pandaJob.out
[2026-04-04 07:52:29] -rw------- 1 boinc boinc   1005165 Apr  4 03:18 agis_schedconf.cvmfs.json
[2026-04-04 07:52:29] -rw------- 1 boinc boinc       420 Apr  4 03:18 workernode_map.json
[2026-04-04 07:52:29] drwx------ 5 boinc boinc      4096 Apr  4 03:18 pilot3
[2026-04-04 07:52:29] -rw------- 1 boinc boinc 227120685 Apr  4 07:50 HITS.49180014._000648.pool.root.1
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc       531 Apr  4 07:50 boinc_task_state.xml
[2026-04-04 07:52:29] -rw------- 1 boinc boinc        95 Apr  4 07:51 pilot_heartbeat.json
[2026-04-04 07:52:29] -rw------- 1 boinc boinc      1021 Apr  4 07:51 memory_monitor_summary.json
[2026-04-04 07:52:29] -rw------- 1 boinc boinc   1511579 Apr  4 07:51 agis_ddmendpoints.agis.ALL.json
[2026-04-04 07:52:29] -rw------- 1 boinc boinc    563391 Apr  4 07:51 log.49180014._000648.job.log.tgz.1
[2026-04-04 07:52:29] -rw------- 1 boinc boinc      6271 Apr  4 07:51 heartbeat.json
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc      8192 Apr  4 07:52 boinc_mmap_file
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc        29 Apr  4 07:52 wrapper_checkpoint.txt
[2026-04-04 07:52:29] -rw------- 1 boinc boinc      4844 Apr  4 07:52 pilotlog.txt
[2026-04-04 07:52:29] -rw------- 1 boinc boinc   2244337 Apr  4 07:52 log.49180014._000648.job.log.1
[2026-04-04 07:52:29] -rw------- 1 boinc boinc       357 Apr  4 07:52 output.list
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc       620 Apr  4 07:52 runtime_log
[2026-04-04 07:52:29] -rw------- 1 boinc boinc   2826240 Apr  4 07:52 result.tar.gz
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc      9167 Apr  4 07:52 runtime_log.err
[2026-04-04 07:52:29] -rw------- 1 boinc boinc       657 Apr  4 07:52 LGnMDm3WcQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmwNHKDmovoa8m.diag
[2026-04-04 07:52:29] -rw-rw-r-- 1 boinc boinc     20947 Apr  4 07:52 stderr.txt
[2026-04-04 07:52:29] HITS file was successfully produced:
[2026-04-04 07:52:29] -rw------- 1 boinc boinc 227120685 Apr  4 07:50 shared/HITS.pool.root.1
[2026-04-04 07:52:29]  *** Contents of shared directory: ***
[2026-04-04 07:52:29] total 457404
[2026-04-04 07:52:29] -rw-r--r-- 2 boinc boinc 237808230 Apr  4 03:18 ATLAS.root_0
[2026-04-04 07:52:29] -rw-r--r-- 2 boinc boinc     15845 Apr  4 03:18 start_atlas.sh
[2026-04-04 07:52:29] -rw-r--r-- 2 boinc boinc    597571 Apr  4 03:18 input.tar.gz
[2026-04-04 07:52:29] -rw------- 1 boinc boinc 227120685 Apr  4 07:50 HITS.pool.root.1
[2026-04-04 07:52:29] -rw------- 1 boinc boinc   2826240 Apr  4 07:52 result.tar.gz
07:52:30 (3903119): run_atlas exited; CPU time 100608.133296
07:52:30 (3903119): called boinc_finish(0)

</stderr_txt>
]]>

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