Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:19:22 (695239): wrapper (7.7.26015): starting
11:19:22 (695239): wrapper: running run_atlas (--nthreads 4)
[2026-04-02 11:19:22] Arguments: --nthreads 4
[2026-04-02 11:19:22] Threads: 4
[2026-04-02 11:19:22] Checking for CVMFS
[2026-04-02 11:19:22] No cvmfs_config command found, will try listing directly
[2026-04-02 11:19:22] CVMFS is ok
[2026-04-02 11:19:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-02 11:19:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-02 11:19:22] Further information can be found at the LHC@home message board.
[2026-04-02 11:19:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 11:19:22] Checking for apptainer binary...
[2026-04-02 11:19:22] which: no apptainer in ((null))
[2026-04-02 11:19:22] apptainer is not installed, using version from CVMFS
[2026-04-02 11:19:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 11:19:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-04-02 11:19:23] apptainer works
[2026-04-02 11:19:23] Set ATHENA_PROC_NUMBER=4
[2026-04-02 11:19:23] Set ATHENA_CORE_NUMBER=4
[2026-04-02 11:19:23] Starting ATLAS job with PandaID=7071892187
[2026-04-02 11:19:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 16:23:43]  *** The last 200 lines of the pilot log: ***
[2026-04-02 16:23:43] 2026-04-02 14:21:23,201 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,202 | INFO     | reading metadata from: /var/lib/boinc/var/slot112/slots/0/PanDA_Pilot-7071892187/jobReport.json
[2026-04-02 16:23:43] 2026-04-02 14:21:23,204 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot112/slots/0/workernode_map.json
[2026-04-02 16:23:43] 2026-04-02 14:21:23,204 | INFO     | this job has now completed (state=finished)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,204 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,204 | INFO     | log transfer has been attempted: DONE
[2026-04-02 16:23:43] 2026-04-02 14:21:23,205 | INFO     | job 7071892187 has finished - writing final server update
[2026-04-02 16:23:43] 2026-04-02 14:21:23,205 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2838734/.job.ad'
[2026-04-02 16:23:43] 2026-04-02 14:21:23,205 | INFO     | total number of processed events: 400 (read)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,229 | INFO     | using path: /var/lib/boinc/var/slot112/slots/0/PanDA_Pilot-7071892187/memory_monitor_summary.json (trf name=prmon)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,229 | INFO     | extracted standard info from prmon json
[2026-04-02 16:23:43] 2026-04-02 14:21:23,229 | INFO     | extracted standard memory fields from prmon json
[2026-04-02 16:23:43] 2026-04-02 14:21:23,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-02 16:23:43] 2026-04-02 14:21:23,230 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-02 16:23:43] 2026-04-02 14:21:23,230 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-02 16:23:43] 2026-04-02 14:21:23,235 | INFO     | fitting pss+swap vs Time
[2026-04-02 16:23:43] 2026-04-02 14:21:23,235 | INFO     | sum of square deviations: 8041713570.0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,238 | INFO     | sum of deviations: 6396104461.500008
[2026-04-02 16:23:43] 2026-04-02 14:21:23,238 | INFO     | mean x: 1775130622.5
[2026-04-02 16:23:43] 2026-04-02 14:21:23,238 | INFO     | mean y: 2343439.368243243
[2026-04-02 16:23:43] 2026-04-02 14:21:23,238 | INFO     | intersect: -1409534861.8776362
[2026-04-02 16:23:43] 2026-04-02 14:21:23,238 | INFO     | chi2: 1.2873262287239828
[2026-04-02 16:23:43] 2026-04-02 14:21:23,239 | INFO     | sum of square deviations: 7641036290.0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,241 | INFO     | sum of deviations: 6150785062.000001
[2026-04-02 16:23:43] 2026-04-02 14:21:23,241 | INFO     | mean x: 1775130470.0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,241 | INFO     | mean y: 2343345.9312714776
[2026-04-02 16:23:43] 2026-04-02 14:21:23,241 | INFO     | intersect: -1426578800.6977482
[2026-04-02 16:23:43] 2026-04-02 14:21:23,242 | INFO     | chi2: 1.2873847696975702
[2026-04-02 16:23:43] 2026-04-02 14:21:23,242 | INFO     | current chi2=1.2873847696975702 (change=-0.004547485499879848 %)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,242 | INFO     | right removable region: 290
[2026-04-02 16:23:43] 2026-04-02 14:21:23,242 | INFO     | sum of square deviations: 7641036290.0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,245 | INFO     | sum of deviations: -27187026376.999977
[2026-04-02 16:23:43] 2026-04-02 14:21:23,245 | INFO     | mean x: 1775130775.0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,245 | INFO     | mean y: 2356092.883161512
[2026-04-02 16:23:43] 2026-04-02 14:21:23,245 | INFO     | intersect: 6318322327.163331
[2026-04-02 16:23:43] 2026-04-02 14:21:23,245 | INFO     | chi2: 0.0591490633935034
[2026-04-02 16:23:43] 2026-04-02 14:21:23,245 | INFO     | current chi2=0.0591490633935034 (change=95.40527784848034 %)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,246 | INFO     | sum of square deviations: 7253894147.5
[2026-04-02 16:23:43] 2026-04-02 14:21:23,248 | INFO     | sum of deviations: -24338338546.5
[2026-04-02 16:23:43] 2026-04-02 14:21:23,248 | INFO     | mean x: 1775130927.5
[2026-04-02 16:23:43] 2026-04-02 14:21:23,248 | INFO     | mean y: 2354960.493006993
[2026-04-02 16:23:43] 2026-04-02 14:21:23,248 | INFO     | intersect: 5958292088.793589
[2026-04-02 16:23:43] 2026-04-02 14:21:23,249 | INFO     | chi2: 0.054419478373576996
[2026-04-02 16:23:43] 2026-04-02 14:21:23,249 | INFO     | current chi2=0.054419478373576996 (change=7.9960438062420325 %)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,249 | INFO     | left removable region: 20
[2026-04-02 16:23:43] 2026-04-02 14:21:23,249 | INFO     | sum of square deviations: 6103286527.5
[2026-04-02 16:23:43] 2026-04-02 14:21:23,251 | INFO     | sum of deviations: -16390025461.999998
[2026-04-02 16:23:43] 2026-04-02 14:21:23,251 | INFO     | mean x: 1775131049.5
[2026-04-02 16:23:43] 2026-04-02 14:21:23,252 | INFO     | mean y: 2351779.437037037
[2026-04-02 16:23:43] 2026-04-02 14:21:23,252 | INFO     | intersect: 4769364268.298397
[2026-04-02 16:23:43] 2026-04-02 14:21:23,252 | INFO     | chi2: 0.045967212204259755
[2026-04-02 16:23:43] 2026-04-02 14:21:23,252 | INFO     | current memory leak: -2.69 B/s (using 270 data points, chi2=0.05)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | could have reported an average CPU frequency of 2686 MHz (14 samples)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | ..............................
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | . Timing measurements:
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | . get job = 0 s
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | . initial setup = 9 s
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | . payload setup = 16 s
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | . stage-in = 0 s
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | . payload execution = 18057 s
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | . stage-out = 1 s
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | . log creation = 0 s
[2026-04-02 16:23:43] 2026-04-02 14:21:23,253 | INFO     | ..............................
[2026-04-02 16:23:43] 2026-04-02 14:21:23,353 | INFO     | 
[2026-04-02 16:23:43] 2026-04-02 14:21:23,354 | INFO     | job summary report
[2026-04-02 16:23:43] 2026-04-02 14:21:23,354 | INFO     | --------------------------------------------------
[2026-04-02 16:23:43] 2026-04-02 14:21:23,354 | INFO     | PanDA job id: 7071892187
[2026-04-02 16:23:43] 2026-04-02 14:21:23,354 | INFO     | task id: 49176387
[2026-04-02 16:23:43] 2026-04-02 14:21:23,354 | INFO     | errors: (none)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,354 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-02 16:23:43] 2026-04-02 14:21:23,354 | INFO     | pilot state: finished 
[2026-04-02 16:23:43] 2026-04-02 14:21:23,354 | INFO     | transexitcode: 0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,354 | INFO     | exeerrorcode: 0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | exeerrordiag: 
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | exitcode: 0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | exitmsg: OK
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | cpuconsumptiontime: 68827 s
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | nevents: 400
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | neventsw: 0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | pid: 705749
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | pgrp: 705749
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | corecount: 4
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | event service: False
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | sizes: {0: 2279828, 1: 2280289, 12: 2280289, 18077: 2313587, 18078: 2322609, 18081: 2322665, 18082: 2322987}
[2026-04-02 16:23:43] 2026-04-02 14:21:23,355 | INFO     | --------------------------------------------------
[2026-04-02 16:23:43] 2026-04-02 14:21:23,356 | INFO     | 
[2026-04-02 16:23:43] 2026-04-02 14:21:23,356 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/0
[2026-04-02 16:23:43] 2026-04-02 14:21:23,390 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,392 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,392 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,392 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-02 16:23:43] 2026-04-02 14:21:23,393 | INFO     | job 7071892187 has completed (purged errors)
[2026-04-02 16:23:43] 2026-04-02 14:21:23,393 | INFO     | overall cleanup function is called
[2026-04-02 16:23:43] 2026-04-02 14:21:24,381 | INFO     | PID=699717 has CPU usage=21.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-02 16:23:43] 2026-04-02 14:21:24,381 | INFO     | .. there are 22 such processes running
[2026-04-02 16:23:43] 2026-04-02 14:21:24,408 | INFO     | --- collectZombieJob: --- 10, [705749]
[2026-04-02 16:23:43] 2026-04-02 14:21:24,408 | INFO     | zombie collector waiting for pid 705749
[2026-04-02 16:23:43] 2026-04-02 14:21:24,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-02 16:23:43] 2026-04-02 14:21:24,408 | INFO     | collected zombie processes
[2026-04-02 16:23:43] 2026-04-02 14:21:24,408 | INFO     | will attempt to kill all subprocesses of pid=705749
[2026-04-02 16:23:43] 2026-04-02 14:21:25,246 | INFO     | process IDs to be killed: [705749] (in reverse order)
[2026-04-02 16:23:43] 2026-04-02 14:21:25,607 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 16:23:43] 2026-04-02 14:21:25,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 16:23:43] 2026-04-02 14:21:25,646 | INFO     | did not find any defunct processes belonging to 705749
[2026-04-02 16:23:43] 2026-04-02 14:21:25,678 | INFO     | did not find any defunct processes belonging to 705749
[2026-04-02 16:23:43] 2026-04-02 14:21:25,678 | INFO     | ready for new job
[2026-04-02 16:23:43] 2026-04-02 14:21:25,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-02 16:23:43] 2026-04-02 14:21:25,681 | INFO     | **************************************
[2026-04-02 16:23:43] 2026-04-02 14:21:25,681 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-02 16:23:43] 2026-04-02 14:21:25,681 | INFO     | **************************************
[2026-04-02 16:23:43] 2026-04-02 14:21:25,681 | INFO     | 
[2026-04-02 16:23:43] 2026-04-02 14:21:25,690 | INFO     | architecture information:
[2026-04-02 16:23:43] 2026-04-02 14:21:25,690 | INFO     | executing command: cat /etc/os-release
[2026-04-02 16:23:43] 2026-04-02 14:21:25,714 | INFO     | cat /etc/os-release:
[2026-04-02 16:23:43] NAME="CentOS Linux"
[2026-04-02 16:23:43] VERSION="7 (Core)"
[2026-04-02 16:23:43] ID="centos"
[2026-04-02 16:23:43] ID_LIKE="rhel fedora"
[2026-04-02 16:23:43] VERSION_ID="7"
[2026-04-02 16:23:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 16:23:43] ANSI_COLOR="0;31"
[2026-04-02 16:23:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 16:23:43] HOME_URL="https://www.centos.org/"
[2026-04-02 16:23:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 16:23:43] 
[2026-04-02 16:23:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 16:23:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 16:23:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 16:23:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 16:23:43] 
[2026-04-02 16:23:43] 2026-04-02 14:21:25,715 | INFO     | **************************************
[2026-04-02 16:23:43] 2026-04-02 14:21:26,217 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/0
[2026-04-02 16:23:43] 2026-04-02 14:21:26,243 | INFO     | sufficient remaining disk space (265997516800 B)
[2026-04-02 16:23:43] 2026-04-02 14:21:26,243 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 16:23:43] 2026-04-02 14:21:26,244 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 16:23:43] 2026-04-02 14:21:26,244 | INFO     | update_server=False
[2026-04-02 16:23:43] 2026-04-02 14:21:26,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-02 16:23:43] 2026-04-02 14:21:26,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 16:23:43] 2026-04-02 14:21:26,669 | INFO     | aborting loop
[2026-04-02 16:23:43] 2026-04-02 14:21:27,062 | INFO     | all job control threads have been joined
[2026-04-02 16:23:43] 2026-04-02 14:21:27,108 | INFO     | all data control threads have been joined
[2026-04-02 16:23:43] 2026-04-02 14:21:27,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 16:23:43] 2026-04-02 14:21:27,249 | INFO     | [job] retrieve thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:27,292 | INFO     | all payload control threads have been joined
[2026-04-02 16:23:43] 2026-04-02 14:21:27,297 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:27,376 | INFO     | [payload] failed_post thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:27,385 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:27,498 | INFO     | [job] validate thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:27,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 16:23:43] 2026-04-02 14:21:27,633 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:27,674 | INFO     | [job] job monitor thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:27,829 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:28,067 | INFO     | [job] control thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:28,113 | INFO     | [data] control thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:28,297 | INFO     | [payload] control thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:28,319 | INFO     | [payload] validate_post thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:28,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 16:23:43] 2026-04-02 14:21:28,540 | INFO     | [data] copytool_in thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:29,142 | INFO     | [data] copytool_out thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:29,367 | INFO     | [job] queue monitor thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:31,538 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 16:23:43] 2026-04-02 14:21:57,452 | INFO     | PID=699717 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-02 16:23:43] 2026-04-02 14:21:57,453 | INFO     | .. there are 22 such processes running
[2026-04-02 16:23:43] 2026-04-02 14:21:57,456 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 16:23:43] 2026-04-02 14:21:57,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 16:23:43] 2026-04-02 14:21:57,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 16:23:43] 2026-04-02 14:22:18,937 | INFO     | [monitor] cgroup control has ended
[2026-04-02 16:23:43] 2026-04-02 14:22:20,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22563198154560)>', '<ExcThread(monitor, started 22562947192576)>']
[2026-04-02 16:23:43] 2026-04-02 14:22:21,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 16:23:43] 2026-04-02 14:22:21,578 | INFO     | [monitor] control thread has ended
[2026-04-02 16:23:43] 2026-04-02 14:22:25,909 | INFO     | all workflow threads have been joined
[2026-04-02 16:23:43] 2026-04-02 14:22:25,909 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 16:23:43] 2026-04-02 14:22:25,909 | INFO     | traces error code: 0
[2026-04-02 16:23:43] 2026-04-02 14:22:25,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 16:23:43] 2026-04-02 14:22:26,054 [wrapper] ==== pilot stdout END ====
[2026-04-02 16:23:43] 2026-04-02 14:22:26,059 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 16:23:43] 2026-04-02 14:22:26,064 [wrapper] pilotpid: 699717
[2026-04-02 16:23:43] 2026-04-02 14:22:26,069 [wrapper] Pilot exit status: 0
[2026-04-02 16:23:43] 2026-04-02 14:22:26,086 [wrapper] pandaids: 7071892187
[2026-04-02 16:23:43] 2026-04-02 14:22:26,293 [wrapper] cleanup supervisor_pilot 1439755 699718
[2026-04-02 16:23:43] 2026-04-02 14:22:26,298 [wrapper] Test setup, not cleaning
[2026-04-02 16:23:43] 2026-04-02 14:22:26,303 [wrapper] apfmon messages muted
[2026-04-02 16:23:43] 2026-04-02 14:22:26,306 [wrapper] ==== wrapper stdout END ====
[2026-04-02 16:23:43] 2026-04-02 14:22:26,310 [wrapper] ==== wrapper stderr END ====
[2026-04-02 16:23:43]  *** Error codes and diagnostics ***
[2026-04-02 16:23:43]     "exeErrorCode": 0,
[2026-04-02 16:23:43]     "exeErrorDiag": "",
[2026-04-02 16:23:43]     "pilotErrorCode": 0,
[2026-04-02 16:23:43]     "pilotErrorDiag": "",
[2026-04-02 16:23:43]  *** Listing of results directory ***
[2026-04-02 16:23:43] total 449348
[2026-04-02 16:23:43] -rwx------. 1 boinc boinc     36322 Mar 28 07:40 runpilot2-wrapper.sh
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc    585013 Mar 28 07:41 pilot3.tar.gz
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc      5118 Mar 28 07:41 queuedata.json
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc       100 Apr  2 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 16:23:43] -rwxr-xr-x. 1 boinc boinc      7986 Apr  2 11:19 run_atlas
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc       105 Apr  2 11:19 job.xml
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc      6624 Apr  2 11:19 init_data.xml
[2026-04-02 16:23:43] -rw-r--r--. 2 boinc boinc 238533841 Apr  2 11:19 EVNT.49133777._000005.pool.root.1
[2026-04-02 16:23:43] -rw-r--r--. 2 boinc boinc    597556 Apr  2 11:19 input.tar.gz
[2026-04-02 16:23:43] -rw-r--r--. 2 boinc boinc     15845 Apr  2 11:19 start_atlas.sh
[2026-04-02 16:23:43] drwxrwx--x. 2 boinc boinc      4096 Apr  2 11:19 shared
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc         0 Apr  2 11:19 boinc_lockfile
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc      2610 Apr  2 11:19 pandaJob.out
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc   1005091 Apr  2 11:19 agis_schedconf.cvmfs.json
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc       441 Apr  2 11:19 workernode_map.json
[2026-04-02 16:23:43] drwx------. 5 boinc boinc      4096 Apr  2 11:19 pilot3
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc 211777820 Apr  2 16:20 HITS.49176387._000463.pool.root.1
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc       529 Apr  2 16:20 boinc_task_state.xml
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc      1031 Apr  2 16:21 memory_monitor_summary.json
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc   1511579 Apr  2 16:21 agis_ddmendpoints.agis.ALL.json
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc    469697 Apr  2 16:21 log.49176387._000463.job.log.tgz.1
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc      6349 Apr  2 16:21 heartbeat.json
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc        95 Apr  2 16:21 pilot_heartbeat.json
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc      4830 Apr  2 16:22 pilotlog.txt
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc   2473792 Apr  2 16:22 log.49176387._000463.job.log.1
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc       357 Apr  2 16:22 output.list
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc       620 Apr  2 16:22 runtime_log
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc   2959360 Apr  2 16:22 result.tar.gz
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc      9222 Apr  2 16:22 runtime_log.err
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc       667 Apr  2 16:22 9gjKDm3WcQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmsMHKDm8jnhHo.diag
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc        27 Apr  2 16:23 wrapper_checkpoint.txt
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc      8192 Apr  2 16:23 boinc_mmap_file
[2026-04-02 16:23:43] -rw-r--r--. 1 boinc boinc     21237 Apr  2 16:23 stderr.txt
[2026-04-02 16:23:43] HITS file was successfully produced:
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc 211777820 Apr  2 16:20 shared/HITS.pool.root.1
[2026-04-02 16:23:43]  *** Contents of shared directory: ***
[2026-04-02 16:23:43] total 443260
[2026-04-02 16:23:43] -rw-r--r--. 2 boinc boinc 238533841 Apr  2 11:19 ATLAS.root_0
[2026-04-02 16:23:43] -rw-r--r--. 2 boinc boinc    597556 Apr  2 11:19 input.tar.gz
[2026-04-02 16:23:43] -rw-r--r--. 2 boinc boinc     15845 Apr  2 11:19 start_atlas.sh
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc 211777820 Apr  2 16:20 HITS.pool.root.1
[2026-04-02 16:23:43] -rw-------. 1 boinc boinc   2959360 Apr  2 16:22 result.tar.gz
16:23:44 (695239): run_atlas exited; CPU time 70067.664325
16:23:44 (695239): called boinc_finish(0)

</stderr_txt>
]]>

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