Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:50:22 (1156523): wrapper (7.7.26015): starting
04:50:22 (1156523): wrapper: running run_atlas (--nthreads 4)
[2026-03-31 04:50:22] Arguments: --nthreads 4
[2026-03-31 04:50:22] Threads: 4
[2026-03-31 04:50:22] Checking for CVMFS
[2026-03-31 04:50:22] No cvmfs_config command found, will try listing directly
[2026-03-31 04:50:22] CVMFS is ok
[2026-03-31 04:50:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 04:50:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 04:50:22] Further information can be found at the LHC@home message board.
[2026-03-31 04:50:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 04:50:22] Checking for apptainer binary...
[2026-03-31 04:50:22] which: no apptainer in ((null))
[2026-03-31 04:50:22] apptainer is not installed, using version from CVMFS
[2026-03-31 04:50:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 04:50:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-31 04:50:22] apptainer works
[2026-03-31 04:50:22] Set ATHENA_PROC_NUMBER=4
[2026-03-31 04:50:22] Set ATHENA_CORE_NUMBER=4
[2026-03-31 04:50:22] Starting ATLAS job with PandaID=7071886986
[2026-03-31 04:50:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 11:17:57]  *** The last 200 lines of the pilot log: ***
[2026-03-31 11:17:57] 2026-03-31 09:15:43,390 | INFO     | time since job start (23094s) is within the limit (345600.0s)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,669 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,669 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/6/PanDA_Pilot-7071886986/jobReport.json
[2026-03-31 11:17:57] 2026-03-31 09:15:43,671 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/6/workernode_map.json
[2026-03-31 11:17:57] 2026-03-31 09:15:43,672 | INFO     | this job has now completed (state=finished)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,672 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,672 | INFO     | log transfer has been attempted: DONE
[2026-03-31 11:17:57] 2026-03-31 09:15:43,672 | INFO     | job 7071886986 has finished - writing final server update
[2026-03-31 11:17:57] 2026-03-31 09:15:43,672 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3835443/.job.ad'
[2026-03-31 11:17:57] 2026-03-31 09:15:43,672 | INFO     | total number of processed events: 400 (read)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,700 | INFO     | using path: /var/lib/boinc/var/slot44/slots/6/PanDA_Pilot-7071886986/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,701 | INFO     | extracted standard info from prmon json
[2026-03-31 11:17:57] 2026-03-31 09:15:43,701 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 11:17:57] 2026-03-31 09:15:43,701 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-31 11:17:57] 2026-03-31 09:15:43,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 11:17:57] 2026-03-31 09:15:43,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 11:17:57] 2026-03-31 09:15:43,708 | INFO     | fitting pss+swap vs Time
[2026-03-31 11:17:57] 2026-03-31 09:15:43,709 | INFO     | sum of square deviations: 16747530754.5
[2026-03-31 11:17:57] 2026-03-31 09:15:43,713 | INFO     | sum of deviations: 48442002071.49999
[2026-03-31 11:17:57] 2026-03-31 09:15:43,713 | INFO     | mean x: 1774936985.5
[2026-03-31 11:17:57] 2026-03-31 09:15:43,713 | INFO     | mean y: 2336627.335978836
[2026-03-31 11:17:57] 2026-03-31 09:15:43,713 | INFO     | intersect: -5131644159.967251
[2026-03-31 11:17:57] 2026-03-31 09:15:43,713 | INFO     | chi2: 1.3840076299939679
[2026-03-31 11:17:57] 2026-03-31 09:15:43,714 | INFO     | sum of square deviations: 16091695202.0
[2026-03-31 11:17:57] 2026-03-31 09:15:43,718 | INFO     | sum of deviations: 47490358608.99999
[2026-03-31 11:17:57] 2026-03-31 09:15:43,718 | INFO     | mean x: 1774936833.0
[2026-03-31 11:17:57] 2026-03-31 09:15:43,718 | INFO     | mean y: 2336406.0428954423
[2026-03-31 11:17:57] 2026-03-31 09:15:43,718 | INFO     | intersect: -5235917590.77754
[2026-03-31 11:17:57] 2026-03-31 09:15:43,718 | INFO     | chi2: 1.3842660765167667
[2026-03-31 11:17:57] 2026-03-31 09:15:43,718 | INFO     | current chi2=1.3842660765167667 (change=-0.01867377875654876 %)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,718 | INFO     | right removable region: 372
[2026-03-31 11:17:57] 2026-03-31 09:15:43,719 | INFO     | sum of square deviations: 16091695202.0
[2026-03-31 11:17:57] 2026-03-31 09:15:43,722 | INFO     | sum of deviations: -2106287483.0
[2026-03-31 11:17:57] 2026-03-31 09:15:43,723 | INFO     | mean x: 1774937138.0
[2026-03-31 11:17:57] 2026-03-31 09:15:43,723 | INFO     | mean y: 2348302.5549597857
[2026-03-31 11:17:57] 2026-03-31 09:15:43,723 | INFO     | intersect: 234674843.04378226
[2026-03-31 11:17:57] 2026-03-31 09:15:43,723 | INFO     | chi2: 0.02072963395738799
[2026-03-31 11:17:57] 2026-03-31 09:15:43,723 | INFO     | current chi2=0.02072963395738799 (change=98.50220233558406 %)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,724 | INFO     | sum of square deviations: 15453208812.0
[2026-03-31 11:17:57] 2026-03-31 09:15:43,727 | INFO     | sum of deviations: 60731477.99999561
[2026-03-31 11:17:57] 2026-03-31 09:15:43,728 | INFO     | mean x: 1774937290.5
[2026-03-31 11:17:57] 2026-03-31 09:15:43,728 | INFO     | mean y: 2347779.7608695654
[2026-03-31 11:17:57] 2026-03-31 09:15:43,728 | INFO     | intersect: -4627765.986345475
[2026-03-31 11:17:57] 2026-03-31 09:15:43,728 | INFO     | chi2: 0.015918220939491797
[2026-03-31 11:17:57] 2026-03-31 09:15:43,729 | INFO     | current chi2=0.015918220939491797 (change=23.210313446858606 %)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,729 | INFO     | left removable region: 20
[2026-03-31 11:17:57] 2026-03-31 09:15:43,729 | INFO     | sum of square deviations: 13523929848.0
[2026-03-31 11:17:57] 2026-03-31 09:15:43,732 | INFO     | sum of deviations: 8244882335.5
[2026-03-31 11:17:57] 2026-03-31 09:15:43,733 | INFO     | mean x: 1774937412.5
[2026-03-31 11:17:57] 2026-03-31 09:15:43,733 | INFO     | mean y: 2345497.0482954546
[2026-03-31 11:17:57] 2026-03-31 09:15:43,733 | INFO     | intersect: -1079747524.981356
[2026-03-31 11:17:57] 2026-03-31 09:15:43,733 | INFO     | chi2: 0.0035798248323848834
[2026-03-31 11:17:57] 2026-03-31 09:15:43,733 | INFO     | current memory leak: 0.61 B/s (using 352 data points, chi2=0.00)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,734 | INFO     | could have reported an average CPU frequency of 2702 MHz (16 samples)
[2026-03-31 11:17:57] 2026-03-31 09:15:43,734 | INFO     | ..............................
[2026-03-31 11:17:57] 2026-03-31 09:15:43,734 | INFO     | . Timing measurements:
[2026-03-31 11:17:57] 2026-03-31 09:15:43,734 | INFO     | . get job = 0 s
[2026-03-31 11:17:57] 2026-03-31 09:15:43,735 | INFO     | . initial setup = 9 s
[2026-03-31 11:17:57] 2026-03-31 09:15:43,735 | INFO     | . payload setup = 17 s
[2026-03-31 11:17:57] 2026-03-31 09:15:43,735 | INFO     | . stage-in = 0 s
[2026-03-31 11:17:57] 2026-03-31 09:15:43,735 | INFO     | . payload execution = 23056 s
[2026-03-31 11:17:57] 2026-03-31 09:15:43,735 | INFO     | . stage-out = 1 s
[2026-03-31 11:17:57] 2026-03-31 09:15:43,735 | INFO     | . log creation = 0 s
[2026-03-31 11:17:57] 2026-03-31 09:15:43,735 | INFO     | ..............................
[2026-03-31 11:17:57] 2026-03-31 09:15:44,062 | INFO     | 
[2026-03-31 11:17:57] 2026-03-31 09:15:44,062 | INFO     | job summary report
[2026-03-31 11:17:57] 2026-03-31 09:15:44,062 | INFO     | --------------------------------------------------
[2026-03-31 11:17:57] 2026-03-31 09:15:44,062 | INFO     | PanDA job id: 7071886986
[2026-03-31 11:17:57] 2026-03-31 09:15:44,062 | INFO     | task id: 49176849
[2026-03-31 11:17:57] 2026-03-31 09:15:44,062 | INFO     | errors: (none)
[2026-03-31 11:17:57] 2026-03-31 09:15:44,062 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 11:17:57] 2026-03-31 09:15:44,062 | INFO     | pilot state: finished 
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | transexitcode: 0
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | exeerrorcode: 0
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | exeerrordiag: 
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | exitcode: 0
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | exitmsg: OK
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | cpuconsumptiontime: 90643 s
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | nevents: 400
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | neventsw: 0
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | pid: 1175420
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | pgrp: 1175420
[2026-03-31 11:17:57] 2026-03-31 09:15:44,063 | INFO     | corecount: 4
[2026-03-31 11:17:57] 2026-03-31 09:15:44,064 | INFO     | event service: False
[2026-03-31 11:17:57] 2026-03-31 09:15:44,064 | INFO     | sizes: {0: 2280166, 1: 2280372, 11: 2280400, 23078: 2315971, 23079: 2324991, 23080: 2325047, 23083: 2325369}
[2026-03-31 11:17:57] 2026-03-31 09:15:44,064 | INFO     | --------------------------------------------------
[2026-03-31 11:17:57] 2026-03-31 09:15:44,064 | INFO     | 
[2026-03-31 11:17:57] 2026-03-31 09:15:44,064 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/6
[2026-03-31 11:17:57] 2026-03-31 09:15:44,100 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,101 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,101 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,101 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 11:17:57] 2026-03-31 09:15:44,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,103 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 11:17:57] 2026-03-31 09:15:44,103 | INFO     | job 7071886986 has completed (purged errors)
[2026-03-31 11:17:57] 2026-03-31 09:15:44,103 | INFO     | overall cleanup function is called
[2026-03-31 11:17:57] 2026-03-31 09:15:45,108 | INFO     | --- collectZombieJob: --- 10, [1175420]
[2026-03-31 11:17:57] 2026-03-31 09:15:45,109 | INFO     | zombie collector waiting for pid 1175420
[2026-03-31 11:17:57] 2026-03-31 09:15:45,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 11:17:57] 2026-03-31 09:15:45,109 | INFO     | collected zombie processes
[2026-03-31 11:17:57] 2026-03-31 09:15:45,109 | INFO     | will attempt to kill all subprocesses of pid=1175420
[2026-03-31 11:17:57] 2026-03-31 09:15:45,936 | INFO     | process IDs to be killed: [1175420] (in reverse order)
[2026-03-31 11:17:57] 2026-03-31 09:15:46,284 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 11:17:57] 2026-03-31 09:15:46,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 11:17:57] 2026-03-31 09:15:46,314 | INFO     | did not find any defunct processes belonging to 1175420
[2026-03-31 11:17:57] 2026-03-31 09:15:46,346 | INFO     | did not find any defunct processes belonging to 1175420
[2026-03-31 11:17:57] 2026-03-31 09:15:46,346 | INFO     | ready for new job
[2026-03-31 11:17:57] 2026-03-31 09:15:46,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-31 11:17:57] 2026-03-31 09:15:46,350 | INFO     | **************************************
[2026-03-31 11:17:57] 2026-03-31 09:15:46,350 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-31 11:17:57] 2026-03-31 09:15:46,350 | INFO     | **************************************
[2026-03-31 11:17:57] 2026-03-31 09:15:46,350 | INFO     | 
[2026-03-31 11:17:57] 2026-03-31 09:15:46,359 | INFO     | architecture information:
[2026-03-31 11:17:57] 2026-03-31 09:15:46,360 | INFO     | executing command: cat /etc/os-release
[2026-03-31 11:17:57] 2026-03-31 09:15:46,389 | INFO     | cat /etc/os-release:
[2026-03-31 11:17:57] NAME="CentOS Linux"
[2026-03-31 11:17:57] VERSION="7 (Core)"
[2026-03-31 11:17:57] ID="centos"
[2026-03-31 11:17:57] ID_LIKE="rhel fedora"
[2026-03-31 11:17:57] VERSION_ID="7"
[2026-03-31 11:17:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 11:17:57] ANSI_COLOR="0;31"
[2026-03-31 11:17:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 11:17:57] HOME_URL="https://www.centos.org/"
[2026-03-31 11:17:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 11:17:57] 
[2026-03-31 11:17:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 11:17:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 11:17:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 11:17:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 11:17:57] 
[2026-03-31 11:17:57] 2026-03-31 09:15:46,390 | INFO     | **************************************
[2026-03-31 11:17:57] 2026-03-31 09:15:46,892 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/6
[2026-03-31 11:17:57] 2026-03-31 09:15:46,916 | INFO     | sufficient remaining disk space (220251291648 B)
[2026-03-31 11:17:57] 2026-03-31 09:15:46,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 11:17:57] 2026-03-31 09:15:46,916 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 11:17:57] 2026-03-31 09:15:46,917 | INFO     | update_server=False
[2026-03-31 11:17:57] 2026-03-31 09:15:46,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-31 11:17:57] 2026-03-31 09:15:46,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 11:17:57] 2026-03-31 09:15:46,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 11:17:57] 2026-03-31 09:15:47,056 | INFO     | all data control threads have been joined
[2026-03-31 11:17:57] 2026-03-31 09:15:47,813 | INFO     | all payload control threads have been joined
[2026-03-31 11:17:57] 2026-03-31 09:15:47,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 11:17:57] 2026-03-31 09:15:47,860 | INFO     | aborting loop
[2026-03-31 11:17:57] 2026-03-31 09:15:47,922 | INFO     | [job] retrieve thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:47,939 | INFO     | [payload] failed_post thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:48,061 | INFO     | [data] control thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:48,063 | INFO     | all job control threads have been joined
[2026-03-31 11:17:57] 2026-03-31 09:15:48,231 | INFO     | [payload] validate_post thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:48,492 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:48,581 | INFO     | [data] copytool_in thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:48,819 | INFO     | [payload] control thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:48,836 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:48,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 11:17:57] 2026-03-31 09:15:48,865 | INFO     | [job] job monitor thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:48,922 | INFO     | [data] copytool_out thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:49,069 | INFO     | [job] control thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:49,282 | INFO     | [job] validate thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:49,406 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:49,842 | INFO     | [job] queue monitor thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:50,923 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:15:57,365 | INFO     | job.realtimelogging is not enabled
[2026-03-31 11:17:57] 2026-03-31 09:15:58,370 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 11:17:57] 2026-03-31 09:16:17,495 | INFO     | PID=1164913 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-31 11:17:57] 2026-03-31 09:16:17,496 | INFO     | .. there are 20 such processes running
[2026-03-31 11:17:57] 2026-03-31 09:16:17,496 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 11:17:57] 2026-03-31 09:16:17,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 11:17:57] 2026-03-31 09:16:17,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 11:17:57] 2026-03-31 09:16:27,505 | INFO     | [monitor] cgroup control has ended
[2026-03-31 11:17:57] 2026-03-31 09:16:28,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22717157766976)>', '<ExcThread(monitor, started 22716920116992)>']
[2026-03-31 11:17:57] 2026-03-31 09:16:28,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 11:17:57] 2026-03-31 09:16:28,552 | INFO     | [monitor] control thread has ended
[2026-03-31 11:17:57] 2026-03-31 09:16:33,188 | INFO     | all workflow threads have been joined
[2026-03-31 11:17:57] 2026-03-31 09:16:33,189 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 11:17:57] 2026-03-31 09:16:33,189 | INFO     | traces error code: 0
[2026-03-31 11:17:57] 2026-03-31 09:16:33,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 11:17:57] 2026-03-31 09:16:33,328 [wrapper] ==== pilot stdout END ====
[2026-03-31 11:17:57] 2026-03-31 09:16:33,332 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 11:17:57] 2026-03-31 09:16:33,336 [wrapper] pilotpid: 1164913
[2026-03-31 11:17:57] 2026-03-31 09:16:33,340 [wrapper] Pilot exit status: 0
[2026-03-31 11:17:57] 2026-03-31 09:16:33,357 [wrapper] pandaids: 7071886986
[2026-03-31 11:17:57] 2026-03-31 09:16:33,556 [wrapper] cleanup supervisor_pilot 1775903 1164914
[2026-03-31 11:17:57] 2026-03-31 09:16:33,560 [wrapper] Test setup, not cleaning
[2026-03-31 11:17:57] 2026-03-31 09:16:33,564 [wrapper] apfmon messages muted
[2026-03-31 11:17:57] 2026-03-31 09:16:33,568 [wrapper] ==== wrapper stdout END ====
[2026-03-31 11:17:57] 2026-03-31 09:16:33,572 [wrapper] ==== wrapper stderr END ====
[2026-03-31 11:17:57]  *** Error codes and diagnostics ***
[2026-03-31 11:17:57]     "exeErrorCode": 0,
[2026-03-31 11:17:57]     "exeErrorDiag": "",
[2026-03-31 11:17:57]     "pilotErrorCode": 0,
[2026-03-31 11:17:57]     "pilotErrorDiag": "",
[2026-03-31 11:17:57]  *** Listing of results directory ***
[2026-03-31 11:17:57] total 471472
[2026-03-31 11:17:57] -rwx------. 1 boinc boinc     36322 Mar 28 06:40 runpilot2-wrapper.sh
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc    585013 Mar 28 06:41 pilot3.tar.gz
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc      5118 Mar 28 06:41 queuedata.json
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc       100 Mar 31 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 11:17:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 04:50 run_atlas
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc       105 Mar 31 04:50 job.xml
[2026-03-31 11:17:57] -rw-r--r--. 2 boinc boinc 237738642 Mar 31 04:50 EVNT.49135471._000003.pool.root.1
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc      6622 Mar 31 04:50 init_data.xml
[2026-03-31 11:17:57] -rw-r--r--. 2 boinc boinc     15845 Mar 31 04:50 start_atlas.sh
[2026-03-31 11:17:57] drwxrwx--x. 2 boinc boinc      4096 Mar 31 04:50 shared
[2026-03-31 11:17:57] -rw-r--r--. 2 boinc boinc    597563 Mar 31 04:50 input.tar.gz
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc         0 Mar 31 04:50 boinc_lockfile
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc      2640 Mar 31 04:50 pandaJob.out
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc   1004000 Mar 31 04:50 agis_schedconf.cvmfs.json
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc       442 Mar 31 04:50 workernode_map.json
[2026-03-31 11:17:57] drwx------. 5 boinc boinc      4096 Mar 31 04:50 pilot3
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc 233777824 Mar 31 11:15 HITS.49176849._000442.pool.root.1
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc       530 Mar 31 11:15 boinc_task_state.xml
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc      1027 Mar 31 11:15 memory_monitor_summary.json
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc        95 Mar 31 11:15 pilot_heartbeat.json
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc   1511579 Mar 31 11:15 agis_ddmendpoints.agis.ALL.json
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc    524077 Mar 31 11:15 log.49176849._000442.job.log.tgz.1
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc      6340 Mar 31 11:15 heartbeat.json
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc      4903 Mar 31 11:16 pilotlog.txt
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc   3145653 Mar 31 11:16 log.49176849._000442.job.log.1
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc       357 Mar 31 11:16 output.list
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc       620 Mar 31 11:16 runtime_log
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc   3686400 Mar 31 11:16 result.tar.gz
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc      9205 Mar 31 11:16 runtime_log.err
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc       667 Mar 31 11:16 51uLDmZabQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm5GHKDm6P1Ran.diag
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc        28 Mar 31 11:17 wrapper_checkpoint.txt
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc      8192 Mar 31 11:17 boinc_mmap_file
[2026-03-31 11:17:57] -rw-r--r--. 1 boinc boinc     21135 Mar 31 11:17 stderr.txt
[2026-03-31 11:17:57] HITS file was successfully produced:
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc 233777824 Mar 31 11:15 shared/HITS.pool.root.1
[2026-03-31 11:17:57]  *** Contents of shared directory: ***
[2026-03-31 11:17:57] total 464676
[2026-03-31 11:17:57] -rw-r--r--. 2 boinc boinc 237738642 Mar 31 04:50 ATLAS.root_0
[2026-03-31 11:17:57] -rw-r--r--. 2 boinc boinc     15845 Mar 31 04:50 start_atlas.sh
[2026-03-31 11:17:57] -rw-r--r--. 2 boinc boinc    597563 Mar 31 04:50 input.tar.gz
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc 233777824 Mar 31 11:15 HITS.pool.root.1
[2026-03-31 11:17:57] -rw-------. 1 boinc boinc   3686400 Mar 31 11:16 result.tar.gz
11:17:58 (1156523): run_atlas exited; CPU time 92304.249109
11:17:58 (1156523): called boinc_finish(0)

</stderr_txt>
]]>

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