Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:15:58 (2777913): wrapper (7.7.26015): starting
05:15:58 (2777913): wrapper: running run_atlas (--nthreads 12)
[2026-04-02 05:15:58] Arguments: --nthreads 12
[2026-04-02 05:15:58] Threads: 12
[2026-04-02 05:15:58] Checking for CVMFS
[2026-04-02 05:15:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-02 05:16:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-02 05:16:00] Running cvmfs_config stat atlas.cern.ch
[2026-04-02 05:16:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-02 05:16:01] 2.13.3.0 2686551 2005 51604 157983 2 50 2855576 4096001 912 130560 0 374634 99.972 73856 8337 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-02 05:16:01] CVMFS is ok
[2026-04-02 05:16:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 05:16:01] Checking for apptainer binary...
[2026-04-02 05:16:01] apptainer is not installed, using version from CVMFS
[2026-04-02 05:16:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 05:16:02] g6400
[2026-04-02 05:16:02] apptainer works
[2026-04-02 05:16:03] Set ATHENA_PROC_NUMBER=12
[2026-04-02 05:16:03] Set ATHENA_CORE_NUMBER=12
[2026-04-02 05:16:03] Starting ATLAS job with PandaID=7071865151
[2026-04-02 05:16:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 17:13:11]  *** The last 200 lines of the pilot log: ***
[2026-04-02 17:13:11] 2026-04-02 17:12:27,708 | INFO     | log transfer has been attempted: DONE
[2026-04-02 17:13:11] 2026-04-02 17:12:27,708 | INFO     | job 7071865151 has finished - writing final server update
[2026-04-02 17:13:11] 2026-04-02 17:12:27,709 | INFO     | total number of processed events: 400 (read)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,726 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7071865151/memory_monitor_summary.json (trf name=prmon)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,726 | INFO     | extracted standard info from prmon json
[2026-04-02 17:13:11] 2026-04-02 17:12:27,726 | INFO     | extracted standard memory fields from prmon json
[2026-04-02 17:13:11] 2026-04-02 17:12:27,726 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-02 17:13:11] 2026-04-02 17:12:27,726 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-02 17:13:11] 2026-04-02 17:12:27,727 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-02 17:13:11] 2026-04-02 17:12:27,734 | INFO     | fitting pss+swap vs Time
[2026-04-02 17:13:11] 2026-04-02 17:12:27,734 | INFO     | sum of square deviations: 106814787491.99443
[2026-04-02 17:13:11] 2026-04-02 17:12:27,741 | INFO     | sum of deviations: 235350442121.7804
[2026-04-02 17:13:11] 2026-04-02 17:12:27,741 | INFO     | mean x: 1775128558.0028532
[2026-04-02 17:13:11] 2026-04-02 17:12:27,741 | INFO     | mean y: 2703148.1098430813
[2026-04-02 17:13:11] 2026-04-02 17:12:27,741 | INFO     | intersect: -3908527691.3493614
[2026-04-02 17:13:11] 2026-04-02 17:12:27,742 | INFO     | chi2: 4.102346087563618
[2026-04-02 17:13:11] 2026-04-02 17:12:27,743 | INFO     | sum of square deviations: 104545424621.99419
[2026-04-02 17:13:11] 2026-04-02 17:12:27,748 | INFO     | time since job start (42872s) is within the limit (345600.0s)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,749 | INFO     | sum of deviations: 233696599669.0634
[2026-04-02 17:13:11] 2026-04-02 17:12:27,750 | INFO     | mean x: 1775128405.5028737
[2026-04-02 17:13:11] 2026-04-02 17:12:27,750 | INFO     | mean y: 2703036.9683908047
[2026-04-02 17:13:11] 2026-04-02 17:12:27,750 | INFO     | intersect: -3965346964.6642375
[2026-04-02 17:13:11] 2026-04-02 17:12:27,750 | INFO     | chi2: 4.102976484397224
[2026-04-02 17:13:11] 2026-04-02 17:12:27,750 | INFO     | current chi2=4.102976484397224 (change=-0.01536673942542986 %)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,750 | INFO     | right removable region: 695
[2026-04-02 17:13:11] 2026-04-02 17:12:27,751 | INFO     | sum of square deviations: 104545423401.99419
[2026-04-02 17:13:11] 2026-04-02 17:12:27,758 | INFO     | sum of deviations: 2932272474.706899
[2026-04-02 17:13:11] 2026-04-02 17:12:27,758 | INFO     | mean x: 1775128710.5028737
[2026-04-02 17:13:11] 2026-04-02 17:12:27,758 | INFO     | mean y: 2718753.146551724
[2026-04-02 17:13:11] 2026-04-02 17:12:27,758 | INFO     | intersect: -47069758.75085421
[2026-04-02 17:13:11] 2026-04-02 17:12:27,758 | INFO     | chi2: 0.6192248400694124
[2026-04-02 17:13:11] 2026-04-02 17:12:27,759 | INFO     | current chi2=0.6192248400694124 (change=84.90559238903293 %)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,759 | INFO     | sum of square deviations: 102308432011.99432
[2026-04-02 17:13:11] 2026-04-02 17:12:27,766 | INFO     | sum of deviations: -54274858282.753944
[2026-04-02 17:13:11] 2026-04-02 17:12:27,766 | INFO     | mean x: 1775128863.0028944
[2026-04-02 17:13:11] 2026-04-02 17:12:27,766 | INFO     | mean y: 2722647.87698987
[2026-04-02 17:13:11] 2026-04-02 17:12:27,766 | INFO     | intersect: 944432588.8700554
[2026-04-02 17:13:11] 2026-04-02 17:12:27,766 | INFO     | chi2: 0.3895213107696398
[2026-04-02 17:13:11] 2026-04-02 17:12:27,767 | INFO     | current chi2=0.3895213107696398 (change=37.09533507635511 %)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,767 | INFO     | sum of square deviations: 100103580759.4936
[2026-04-02 17:13:11] 2026-04-02 17:12:27,774 | INFO     | sum of deviations: -70347621216.45332
[2026-04-02 17:13:11] 2026-04-02 17:12:27,774 | INFO     | mean x: 1775129015.5029154
[2026-04-02 17:13:11] 2026-04-02 17:12:27,774 | INFO     | mean y: 2723759.476676385
[2026-04-02 17:13:11] 2026-04-02 17:12:27,774 | INFO     | intersect: 1250192657.6468532
[2026-04-02 17:13:11] 2026-04-02 17:12:27,774 | INFO     | chi2: 0.36987459010941043
[2026-04-02 17:13:11] 2026-04-02 17:12:27,774 | INFO     | current chi2=0.36987459010941043 (change=5.043811498120654 %)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,775 | INFO     | left removable region: 30
[2026-04-02 17:13:11] 2026-04-02 17:12:27,775 | INFO     | sum of square deviations: 91188928793.99399
[2026-04-02 17:13:11] 2026-04-02 17:12:27,781 | INFO     | sum of deviations: -52644000442.350426
[2026-04-02 17:13:11] 2026-04-02 17:12:27,781 | INFO     | mean x: 1775129290.0030074
[2026-04-02 17:13:11] 2026-04-02 17:12:27,781 | INFO     | mean y: 2722512.67518797
[2026-04-02 17:13:11] 2026-04-02 17:12:27,781 | INFO     | intersect: 1027516951.6937813
[2026-04-02 17:13:11] 2026-04-02 17:12:27,782 | INFO     | chi2: 0.27039099608389144
[2026-04-02 17:13:11] 2026-04-02 17:12:27,782 | INFO     | current memory leak: -0.58 B/s (using 665 data points, chi2=0.27)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,782 | INFO     | could have reported an average CPU frequency of 3999 MHz (27 samples)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,782 | INFO     | ..............................
[2026-04-02 17:13:11] 2026-04-02 17:12:27,783 | INFO     | . Timing measurements:
[2026-04-02 17:13:11] 2026-04-02 17:12:27,783 | INFO     | . get job = 0 s
[2026-04-02 17:13:11] 2026-04-02 17:12:27,783 | INFO     | . initial setup = 39 s
[2026-04-02 17:13:11] 2026-04-02 17:12:27,783 | INFO     | . payload setup = 93 s
[2026-04-02 17:13:11] 2026-04-02 17:12:27,783 | INFO     | . stage-in = 0 s
[2026-04-02 17:13:11] 2026-04-02 17:12:27,783 | INFO     | . payload execution = 42760 s
[2026-04-02 17:13:11] 2026-04-02 17:12:27,783 | INFO     | . stage-out = 0 s
[2026-04-02 17:13:11] 2026-04-02 17:12:27,783 | INFO     | . log creation = 0 s
[2026-04-02 17:13:11] 2026-04-02 17:12:27,783 | INFO     | ..............................
[2026-04-02 17:13:11] 2026-04-02 17:12:27,885 | INFO     | 
[2026-04-02 17:13:11] 2026-04-02 17:12:27,885 | INFO     | job summary report
[2026-04-02 17:13:11] 2026-04-02 17:12:27,885 | INFO     | --------------------------------------------------
[2026-04-02 17:13:11] 2026-04-02 17:12:27,885 | INFO     | PanDA job id: 7071865151
[2026-04-02 17:13:11] 2026-04-02 17:12:27,885 | INFO     | task id: 49176283
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | errors: (none)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | pilot state: finished 
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | transexitcode: 0
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | exeerrorcode: 0
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | exeerrordiag: 
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | exitcode: 0
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | exitmsg: OK
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | cpuconsumptiontime: 85507 s
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | nevents: 400
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | neventsw: 0
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | pid: 2786312
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | pgrp: 2786312
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | corecount: 12
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | event service: False
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | sizes: {0: 2279826, 1: 2279910, 2: 2280371, 13: 2280371, 42856: 2324423, 42857: 2324422, 42858: 2333734, 42859: 2333872}
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | --------------------------------------------------
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | 
[2026-04-02 17:13:11] 2026-04-02 17:12:27,886 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-02 17:13:11] 2026-04-02 17:12:27,896 | INFO     | job 7071865151 has completed (purged errors)
[2026-04-02 17:13:11] 2026-04-02 17:12:27,897 | INFO     | overall cleanup function is called
[2026-04-02 17:13:11] 2026-04-02 17:12:28,903 | INFO     | --- collectZombieJob: --- 10, [2786312]
[2026-04-02 17:13:11] 2026-04-02 17:12:28,903 | INFO     | zombie collector waiting for pid 2786312
[2026-04-02 17:13:11] 2026-04-02 17:12:28,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-02 17:13:11] 2026-04-02 17:12:28,903 | INFO     | collected zombie processes
[2026-04-02 17:13:11] 2026-04-02 17:12:28,903 | INFO     | will attempt to kill all subprocesses of pid=2786312
[2026-04-02 17:13:11] 2026-04-02 17:12:28,924 | INFO     | process IDs to be killed: [2786312] (in reverse order)
[2026-04-02 17:13:11] 2026-04-02 17:12:28,937 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 17:13:11] 2026-04-02 17:12:28,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 17:13:11] 2026-04-02 17:12:28,938 | INFO     | did not find any defunct processes belonging to 2786312
[2026-04-02 17:13:11] 2026-04-02 17:12:28,939 | INFO     | did not find any defunct processes belonging to 2786312
[2026-04-02 17:13:11] 2026-04-02 17:12:28,939 | INFO     | ready for new job
[2026-04-02 17:13:11] 2026-04-02 17:12:28,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-02 17:13:11] 2026-04-02 17:12:28,941 | INFO     | **************************************
[2026-04-02 17:13:11] 2026-04-02 17:12:28,941 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-02 17:13:11] 2026-04-02 17:12:28,941 | INFO     | **************************************
[2026-04-02 17:13:11] 2026-04-02 17:12:28,941 | INFO     | 
[2026-04-02 17:13:11] 2026-04-02 17:12:28,961 | INFO     | architecture information:
[2026-04-02 17:13:11] 2026-04-02 17:12:28,962 | INFO     | executing command: cat /etc/os-release
[2026-04-02 17:13:11] 2026-04-02 17:12:28,968 | INFO     | cat /etc/os-release:
[2026-04-02 17:13:11] NAME="CentOS Linux"
[2026-04-02 17:13:11] VERSION="7 (Core)"
[2026-04-02 17:13:11] ID="centos"
[2026-04-02 17:13:11] ID_LIKE="rhel fedora"
[2026-04-02 17:13:11] VERSION_ID="7"
[2026-04-02 17:13:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 17:13:11] ANSI_COLOR="0;31"
[2026-04-02 17:13:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 17:13:11] HOME_URL="https://www.centos.org/"
[2026-04-02 17:13:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 17:13:11] 
[2026-04-02 17:13:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 17:13:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 17:13:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 17:13:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 17:13:11] 
[2026-04-02 17:13:11] 2026-04-02 17:12:28,968 | INFO     | **************************************
[2026-04-02 17:13:11] 2026-04-02 17:12:29,471 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-04-02 17:13:11] 2026-04-02 17:12:29,476 | INFO     | sufficient remaining disk space (190191763456 B)
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | INFO     | update_server=False
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | INFO     | aborting loop
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 17:13:11] 2026-04-02 17:12:29,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 17:13:11] 2026-04-02 17:12:30,105 | INFO     | all payload control threads have been joined
[2026-04-02 17:13:11] 2026-04-02 17:12:30,173 | INFO     | all data control threads have been joined
[2026-04-02 17:13:11] 2026-04-02 17:12:30,480 | INFO     | [job] queue monitor thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:30,480 | INFO     | [job] job monitor thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:30,481 | INFO     | [job] retrieve thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:30,795 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:30,823 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:30,841 | INFO     | [payload] failed_post thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:30,897 | INFO     | job.realtimelogging is not enabled
[2026-04-02 17:13:11] 2026-04-02 17:12:30,970 | INFO     | all job control threads have been joined
[2026-04-02 17:13:11] 2026-04-02 17:12:31,109 | INFO     | [payload] control thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:31,156 | INFO     | [payload] validate_post thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:31,177 | INFO     | [data] control thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:31,377 | INFO     | [job] validate thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:31,422 | INFO     | [data] copytool_in thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:31,482 | INFO     | [data] copytool_out thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:31,854 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:31,901 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:31,971 | INFO     | [job] control thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:12:32,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 17:13:11] 2026-04-02 17:12:36,406 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 17:13:11] 2026-04-02 17:13:05,948 | INFO     | [monitor] cgroup control has ended
[2026-04-02 17:13:11] 2026-04-02 17:13:06,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214478866240)>', '<ExcThread(monitor, started 140213888210688)>']
[2026-04-02 17:13:11] 2026-04-02 17:13:06,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 17:13:11] 2026-04-02 17:13:06,639 | INFO     | [monitor] control thread has ended
[2026-04-02 17:13:11] 2026-04-02 17:13:11,325 | INFO     | all workflow threads have been joined
[2026-04-02 17:13:11] 2026-04-02 17:13:11,325 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 17:13:11] 2026-04-02 17:13:11,326 | INFO     | traces error code: 0
[2026-04-02 17:13:11] 2026-04-02 17:13:11,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 17:13:11] 2026-04-02 17:13:11,433 [wrapper] ==== pilot stdout END ====
[2026-04-02 17:13:11] 2026-04-02 17:13:11,434 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 17:13:11] 2026-04-02 17:13:11,435 [wrapper] pilotpid: 2781927
[2026-04-02 17:13:11] 2026-04-02 17:13:11,436 [wrapper] Pilot exit status: 0
[2026-04-02 17:13:11] 2026-04-02 17:13:11,439 [wrapper] pandaids: 7071865151
[2026-04-02 17:13:11] 2026-04-02 17:13:11,446 [wrapper] cleanup supervisor_pilot 2809003 2781928
[2026-04-02 17:13:11] 2026-04-02 17:13:11,447 [wrapper] Test setup, not cleaning
[2026-04-02 17:13:11] 2026-04-02 17:13:11,448 [wrapper] apfmon messages muted
[2026-04-02 17:13:11] 2026-04-02 17:13:11,448 [wrapper] ==== wrapper stdout END ====
[2026-04-02 17:13:11] 2026-04-02 17:13:11,449 [wrapper] ==== wrapper stderr END ====
[2026-04-02 17:13:11]  *** Error codes and diagnostics ***
[2026-04-02 17:13:11]     "exeErrorCode": 0,
[2026-04-02 17:13:11]     "exeErrorDiag": "",
[2026-04-02 17:13:11]     "pilotErrorCode": 0,
[2026-04-02 17:13:11]     "pilotErrorDiag": "",
[2026-04-02 17:13:11]  *** Listing of results directory ***
[2026-04-02 17:13:11] total 488220
[2026-04-02 17:13:11] -rw-r--r-- 1 boinc boinc    585013 Mar 28 05:04 pilot3.tar.gz
[2026-04-02 17:13:11] -rwx------ 1 boinc boinc     36322 Mar 28 05:08 runpilot2-wrapper.sh
[2026-04-02 17:13:11] -rw-r--r-- 1 boinc boinc      5118 Mar 28 05:09 queuedata.json
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc       100 Apr  2 05:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 17:13:11] -rwxr-xr-x 1 boinc boinc      7986 Apr  2 05:15 run_atlas
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc       105 Apr  2 05:15 job.xml
[2026-04-02 17:13:11] -rw-r--r-- 2 boinc boinc 244763497 Apr  2 05:15 EVNT.49133333._000005.pool.root.1
[2026-04-02 17:13:11] drwxrwx--x 2 boinc boinc      4096 Apr  2 05:15 shared
[2026-04-02 17:13:11] -rw-r--r-- 2 boinc boinc    597554 Apr  2 05:15 input.tar.gz
[2026-04-02 17:13:11] -rw-r--r-- 2 boinc boinc     15845 Apr  2 05:15 start_atlas.sh
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc      9478 Apr  2 05:15 init_data.xml
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc         0 Apr  2 05:15 boinc_setup_complete
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc         0 Apr  2 05:15 boinc_lockfile
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc      2605 Apr  2 05:16 pandaJob.out
[2026-04-02 17:13:11] -rw------- 1 boinc boinc   1005493 Apr  2 05:17 agis_schedconf.cvmfs.json
[2026-04-02 17:13:11] -rw------- 1 boinc boinc       419 Apr  2 05:17 workernode_map.json
[2026-04-02 17:13:11] drwx------ 5 boinc boinc      4096 Apr  2 05:17 pilot3
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc       530 Apr  2 17:11 boinc_task_state.xml
[2026-04-02 17:13:11] -rw------- 1 boinc boinc 237221642 Apr  2 17:12 HITS.49176283._000490.pool.root.1
[2026-04-02 17:13:11] -rw------- 1 boinc boinc        95 Apr  2 17:12 pilot_heartbeat.json
[2026-04-02 17:13:11] -rw------- 1 boinc boinc      1023 Apr  2 17:12 memory_monitor_summary.json
[2026-04-02 17:13:11] -rw------- 1 boinc boinc   1511579 Apr  2 17:12 agis_ddmendpoints.agis.ALL.json
[2026-04-02 17:13:11] -rw------- 1 boinc boinc    911827 Apr  2 17:12 log.49176283._000490.job.log.tgz.1
[2026-04-02 17:13:11] -rw------- 1 boinc boinc      6310 Apr  2 17:12 heartbeat.json
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc        28 Apr  2 17:12 wrapper_checkpoint.txt
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc      8192 Apr  2 17:12 boinc_mmap_file
[2026-04-02 17:13:11] -rw------- 1 boinc boinc      4644 Apr  2 17:13 pilotlog.txt
[2026-04-02 17:13:11] -rw------- 1 boinc boinc   6092243 Apr  2 17:13 log.49176283._000490.job.log.1
[2026-04-02 17:13:11] -rw------- 1 boinc boinc       357 Apr  2 17:13 output.list
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc       620 Apr  2 17:13 runtime_log
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc      9160 Apr  2 17:13 runtime_log.err
[2026-04-02 17:13:11] -rw------- 1 boinc boinc   7024640 Apr  2 17:13 result.tar.gz
[2026-04-02 17:13:11] -rw------- 1 boinc boinc       653 Apr  2 17:13 FwoNDml5aQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmQ4GKDmaLUlXm.diag
[2026-04-02 17:13:11] -rw-rw-r-- 1 boinc boinc     20856 Apr  2 17:13 stderr.txt
[2026-04-02 17:13:11] HITS file was successfully produced:
[2026-04-02 17:13:11] -rw------- 1 boinc boinc 237221642 Apr  2 17:12 shared/HITS.pool.root.1
[2026-04-02 17:13:11]  *** Contents of shared directory: ***
[2026-04-02 17:13:11] total 478160
[2026-04-02 17:13:11] -rw-r--r-- 2 boinc boinc 244763497 Apr  2 05:15 ATLAS.root_0
[2026-04-02 17:13:11] -rw-r--r-- 2 boinc boinc    597554 Apr  2 05:15 input.tar.gz
[2026-04-02 17:13:11] -rw-r--r-- 2 boinc boinc     15845 Apr  2 05:15 start_atlas.sh
[2026-04-02 17:13:11] -rw------- 1 boinc boinc 237221642 Apr  2 17:12 HITS.pool.root.1
[2026-04-02 17:13:11] -rw------- 1 boinc boinc   7024640 Apr  2 17:13 result.tar.gz
17:13:12 (2777913): run_atlas exited; CPU time 85635.011518
17:13:12 (2777913): called boinc_finish(0)

</stderr_txt>
]]>

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