Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:56:14 (15429): wrapper (7.7.26015): starting
17:56:14 (15429): wrapper: running run_atlas (--nthreads 8)
[2026-03-28 17:56:14] Arguments: --nthreads 8
[2026-03-28 17:56:14] Threads: 8
[2026-03-28 17:56:14] Checking for CVMFS
[2026-03-28 17:56:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 17:56:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 17:56:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 17:56:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 17:56:19] 2.11.2.0 9107 148002 138500 157806 2 53 17115167 25165824 4688 130560 145 44460459 99.823 35513763 1168 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-28 17:56:19] CVMFS is ok
[2026-03-28 17:56:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 17:56:19] Checking for apptainer binary...
[2026-03-28 17:56:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-28 17:56:19] Running /usr/bin/apptainer --version
[2026-03-28 17:56:19] apptainer version 1.3.2-1.el7
[2026-03-28 17:56:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 17:56:27] cg-vwn398.simple-grid.lan
[2026-03-28 17:56:27] apptainer works
[2026-03-28 17:56:27] Set ATHENA_PROC_NUMBER=8
[2026-03-28 17:56:27] Set ATHENA_CORE_NUMBER=8
[2026-03-28 17:56:27] Starting ATLAS job with PandaID=7071865093
[2026-03-28 17:56:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 06:38:08]  *** The last 200 lines of the pilot log: ***
[2026-03-29 06:38:08] 2026-03-29 04:36:59,491 | INFO     | job 7071865093 has finished - writing final server update
[2026-03-29 06:38:08] 2026-03-29 04:36:59,491 | INFO     | total number of processed events: 400 (read)
[2026-03-29 06:38:08] 2026-03-29 04:36:59,493 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7071865093/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 06:38:08] 2026-03-29 04:36:59,494 | INFO     | extracted standard info from prmon json
[2026-03-29 06:38:08] 2026-03-29 04:36:59,494 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 06:38:08] 2026-03-29 04:36:59,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 06:38:08] 2026-03-29 04:36:59,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 06:38:08] 2026-03-29 04:36:59,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 06:38:08] 2026-03-29 04:36:59,508 | INFO     | fitting pss+swap vs Time
[2026-03-29 06:38:08] 2026-03-29 04:36:59,509 | INFO     | sum of square deviations: 97499911810.0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,527 | INFO     | sum of deviations: 312518724214.00006
[2026-03-29 06:38:08] 2026-03-29 04:36:59,528 | INFO     | mean x: 1774738291.5
[2026-03-29 06:38:08] 2026-03-29 04:36:59,528 | INFO     | mean y: 2487162.1088235294
[2026-03-29 06:38:08] 2026-03-29 04:36:59,528 | INFO     | intersect: -5686122564.576365
[2026-03-29 06:38:08] 2026-03-29 04:36:59,529 | INFO     | chi2: 7.791367323867822
[2026-03-29 06:38:08] 2026-03-29 04:36:59,532 | INFO     | sum of square deviations: 95364950850.0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,549 | INFO     | sum of deviations: 403011700163.0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,550 | INFO     | mean x: 1774738139.0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,550 | INFO     | mean y: 2493596.4355555554
[2026-03-29 06:38:08] 2026-03-29 04:36:59,550 | INFO     | intersect: -7497538945.577847
[2026-03-29 06:38:08] 2026-03-29 04:36:59,551 | INFO     | chi2: 6.197634343874513
[2026-03-29 06:38:08] 2026-03-29 04:36:59,551 | INFO     | current chi2=6.197634343874513 (change=20.455112867174403 %)
[2026-03-29 06:38:08] 2026-03-29 04:36:59,551 | INFO     | right removable region: 674
[2026-03-29 06:38:08] 2026-03-29 04:36:59,552 | INFO     | sum of square deviations: 95364950850.0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,569 | INFO     | sum of deviations: 63616671615.99999
[2026-03-29 06:38:08] 2026-03-29 04:36:59,569 | INFO     | mean x: 1774738444.0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,570 | INFO     | mean y: 2504938.1407407406
[2026-03-29 06:38:08] 2026-03-29 04:36:59,570 | INFO     | intersect: -1181399125.0388694
[2026-03-29 06:38:08] 2026-03-29 04:36:59,571 | INFO     | chi2: 2.967094191499371
[2026-03-29 06:38:08] 2026-03-29 04:36:59,571 | INFO     | current chi2=2.967094191499371 (change=61.91818370043893 %)
[2026-03-29 06:38:08] 2026-03-29 04:36:59,572 | INFO     | sum of square deviations: 93261385827.5
[2026-03-29 06:38:08] 2026-03-29 04:36:59,589 | INFO     | sum of deviations: -46746466872.49999
[2026-03-29 06:38:08] 2026-03-29 04:36:59,589 | INFO     | mean x: 1774738596.5
[2026-03-29 06:38:08] 2026-03-29 04:36:59,589 | INFO     | mean y: 2512920.4164179103
[2026-03-29 06:38:08] 2026-03-29 04:36:59,589 | INFO     | intersect: 892085365.3518345
[2026-03-29 06:38:08] 2026-03-29 04:36:59,590 | INFO     | chi2: 1.7662297516946366
[2026-03-29 06:38:08] 2026-03-29 04:36:59,591 | INFO     | current chi2=1.7662297516946366 (change=40.47274411594927 %)
[2026-03-29 06:38:08] 2026-03-29 04:36:59,592 | INFO     | sum of square deviations: 91188984180.0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,613 | INFO     | sum of deviations: -56058442032.999985
[2026-03-29 06:38:08] 2026-03-29 04:36:59,613 | INFO     | mean x: 1774738749.0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,614 | INFO     | mean y: 2513605.596992481
[2026-03-29 06:38:08] 2026-03-29 04:36:59,614 | INFO     | intersect: 1093534524.1780312
[2026-03-29 06:38:08] 2026-03-29 04:36:59,615 | INFO     | chi2: 1.759664649284873
[2026-03-29 06:38:08] 2026-03-29 04:36:59,615 | INFO     | current chi2=1.759664649284873 (change=0.3717014959953257 %)
[2026-03-29 06:38:08] 2026-03-29 04:36:59,615 | INFO     | left removable region: 30
[2026-03-29 06:38:08] 2026-03-29 04:36:59,616 | INFO     | sum of square deviations: 82819952845.0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,629 | INFO     | sum of deviations: 86218202942.99998
[2026-03-29 06:38:08] 2026-03-29 04:36:59,629 | INFO     | mean x: 1774739023.5
[2026-03-29 06:38:08] 2026-03-29 04:36:59,629 | INFO     | mean y: 2516408.7267080746
[2026-03-29 06:38:08] 2026-03-29 04:36:59,629 | INFO     | intersect: -1845043316.2269676
[2026-03-29 06:38:08] 2026-03-29 04:36:59,630 | INFO     | chi2: 0.0067031331496131075
[2026-03-29 06:38:08] 2026-03-29 04:36:59,630 | INFO     | current memory leak: 1.04 B/s (using 644 data points, chi2=0.01)
[2026-03-29 06:38:08] 2026-03-29 04:36:59,631 | INFO     | could have reported an average CPU frequency of 1999 MHz (27 samples)
[2026-03-29 06:38:08] 2026-03-29 04:36:59,632 | INFO     | ..............................
[2026-03-29 06:38:08] 2026-03-29 04:36:59,632 | INFO     | . Timing measurements:
[2026-03-29 06:38:08] 2026-03-29 04:36:59,632 | INFO     | . get job = 0 s
[2026-03-29 06:38:08] 2026-03-29 04:36:59,636 | INFO     | . initial setup = 105 s
[2026-03-29 06:38:08] 2026-03-29 04:36:59,636 | INFO     | . payload setup = 140 s
[2026-03-29 06:38:08] 2026-03-29 04:36:59,636 | INFO     | . stage-in = 0 s
[2026-03-29 06:38:08] 2026-03-29 04:36:59,637 | INFO     | . payload execution = 41550 s
[2026-03-29 06:38:08] 2026-03-29 04:36:59,637 | INFO     | . stage-out = 4 s
[2026-03-29 06:38:08] 2026-03-29 04:36:59,637 | INFO     | . log creation = 1 s
[2026-03-29 06:38:08] 2026-03-29 04:36:59,637 | INFO     | ..............................
[2026-03-29 06:38:08] 2026-03-29 04:36:59,827 | INFO     | 
[2026-03-29 06:38:08] 2026-03-29 04:36:59,828 | INFO     | job summary report
[2026-03-29 06:38:08] 2026-03-29 04:36:59,828 | INFO     | --------------------------------------------------
[2026-03-29 06:38:08] 2026-03-29 04:36:59,828 | INFO     | PanDA job id: 7071865093
[2026-03-29 06:38:08] 2026-03-29 04:36:59,828 | INFO     | task id: 49176275
[2026-03-29 06:38:08] 2026-03-29 04:36:59,828 | INFO     | errors: (none)
[2026-03-29 06:38:08] 2026-03-29 04:36:59,828 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 06:38:08] 2026-03-29 04:36:59,828 | INFO     | pilot state: finished 
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | transexitcode: 0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | exeerrorcode: 0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | exeerrordiag: 
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | exitcode: 0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | exitmsg: OK
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | cpuconsumptiontime: 161085 s
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | nevents: 400
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | neventsw: 0
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | pid: 24078
[2026-03-29 06:38:08] 2026-03-29 04:36:59,829 | INFO     | pgrp: 24078
[2026-03-29 06:38:08] 2026-03-29 04:36:59,830 | INFO     | corecount: 8
[2026-03-29 06:38:08] 2026-03-29 04:36:59,830 | INFO     | event service: False
[2026-03-29 06:38:08] 2026-03-29 04:36:59,830 | INFO     | sizes: {0: 2279864, 1: 2280325, 12: 2280325, 41695: 2323208, 41700: 2332208, 41703: 2332264, 41704: 2332586}
[2026-03-29 06:38:08] 2026-03-29 04:36:59,830 | INFO     | --------------------------------------------------
[2026-03-29 06:38:08] 2026-03-29 04:36:59,830 | INFO     | 
[2026-03-29 06:38:08] 2026-03-29 04:36:59,830 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-29 06:38:08] 2026-03-29 04:37:00,031 | INFO     | time since job start (41717s) is within the limit (345600.0s)
[2026-03-29 06:38:08] 2026-03-29 04:37:00,256 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,257 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,257 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,257 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,258 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,259 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 06:38:08] 2026-03-29 04:37:00,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,259 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 06:38:08] 2026-03-29 04:37:00,259 | INFO     | job 7071865093 has completed (purged errors)
[2026-03-29 06:38:08] 2026-03-29 04:37:00,259 | INFO     | overall cleanup function is called
[2026-03-29 06:38:08] 2026-03-29 04:37:01,268 | INFO     | --- collectZombieJob: --- 10, [24078]
[2026-03-29 06:38:08] 2026-03-29 04:37:01,268 | INFO     | zombie collector waiting for pid 24078
[2026-03-29 06:38:08] 2026-03-29 04:37:01,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 06:38:08] 2026-03-29 04:37:01,269 | INFO     | collected zombie processes
[2026-03-29 06:38:08] 2026-03-29 04:37:01,269 | INFO     | will attempt to kill all subprocesses of pid=24078
[2026-03-29 06:38:08] 2026-03-29 04:37:01,372 | INFO     | process IDs to be killed: [24078] (in reverse order)
[2026-03-29 06:38:08] 2026-03-29 04:37:02,121 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 06:38:08] 2026-03-29 04:37:02,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 06:38:08] 2026-03-29 04:37:02,124 | INFO     | did not find any defunct processes belonging to 24078
[2026-03-29 06:38:08] 2026-03-29 04:37:02,128 | INFO     | did not find any defunct processes belonging to 24078
[2026-03-29 06:38:08] 2026-03-29 04:37:02,128 | INFO     | ready for new job
[2026-03-29 06:38:08] 2026-03-29 04:37:02,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 06:38:08] 2026-03-29 04:37:02,132 | INFO     | **************************************
[2026-03-29 06:38:08] 2026-03-29 04:37:02,132 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 06:38:08] 2026-03-29 04:37:02,132 | INFO     | **************************************
[2026-03-29 06:38:08] 2026-03-29 04:37:02,132 | INFO     | 
[2026-03-29 06:38:08] 2026-03-29 04:37:02,133 | INFO     | pilot is running in a VM
[2026-03-29 06:38:08] 2026-03-29 04:37:02,133 | INFO     | architecture information:
[2026-03-29 06:38:08] 2026-03-29 04:37:02,139 | INFO     | executing command: cat /etc/os-release
[2026-03-29 06:38:08] 2026-03-29 04:37:02,349 | INFO     | cat /etc/os-release:
[2026-03-29 06:38:08] NAME="CentOS Linux"
[2026-03-29 06:38:08] VERSION="7 (Core)"
[2026-03-29 06:38:08] ID="centos"
[2026-03-29 06:38:08] ID_LIKE="rhel fedora"
[2026-03-29 06:38:08] VERSION_ID="7"
[2026-03-29 06:38:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 06:38:08] ANSI_COLOR="0;31"
[2026-03-29 06:38:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 06:38:08] HOME_URL="https://www.centos.org/"
[2026-03-29 06:38:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 06:38:08] 
[2026-03-29 06:38:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 06:38:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 06:38:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 06:38:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 06:38:08] 
[2026-03-29 06:38:08] 2026-03-29 04:37:02,349 | INFO     | **************************************
[2026-03-29 06:38:08] 2026-03-29 04:37:02,852 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-29 06:38:08] 2026-03-29 04:37:03,067 | INFO     | sufficient remaining disk space (496377004032 B)
[2026-03-29 06:38:08] 2026-03-29 04:37:03,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 06:38:08] 2026-03-29 04:37:03,067 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 06:38:08] 2026-03-29 04:37:03,067 | INFO     | update_server=False
[2026-03-29 06:38:08] 2026-03-29 04:37:03,067 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 06:38:08] 2026-03-29 04:37:03,513 | INFO     | all payload control threads have been joined
[2026-03-29 06:38:08] 2026-03-29 04:37:03,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 06:38:08] 2026-03-29 04:37:03,558 | INFO     | aborting loop
[2026-03-29 06:38:08] 2026-03-29 04:37:03,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 06:38:08] 2026-03-29 04:37:03,715 | INFO     | all data control threads have been joined
[2026-03-29 06:38:08] 2026-03-29 04:37:04,073 | INFO     | [job] retrieve thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:04,119 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:04,519 | INFO     | [payload] control thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:04,564 | INFO     | [job] job monitor thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:04,721 | INFO     | [data] control thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:04,762 | INFO     | all job control threads have been joined
[2026-03-29 06:38:08] 2026-03-29 04:37:04,794 | INFO     | [data] copytool_in thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:04,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 06:38:08] 2026-03-29 04:37:04,846 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 06:38:08] 2026-03-29 04:37:04,924 | INFO     | [payload] validate_post thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:05,182 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:05,340 | INFO     | [payload] failed_post thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:05,347 | INFO     | [job] validate thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:05,439 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:05,503 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:05,681 | INFO     | [data] copytool_out thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:05,768 | INFO     | [job] control thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:05,852 | INFO     | [job] queue monitor thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:08,849 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 06:38:08] 2026-03-29 04:37:33,229 | INFO     | PID=19567 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-29 06:38:08] 2026-03-29 04:37:33,229 | INFO     | .. there are 9 such processes running
[2026-03-29 06:38:08] 2026-03-29 04:37:33,231 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 06:38:08] 2026-03-29 04:37:33,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 06:38:08] 2026-03-29 04:37:33,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 06:38:08] 2026-03-29 04:37:55,790 | INFO     | [monitor] cgroup control has ended
[2026-03-29 06:38:08] 2026-03-29 04:37:57,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516644824896)>', '<ExcThread(monitor, started 140516222035712)>']
[2026-03-29 06:38:08] 2026-03-29 04:37:58,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 06:38:08] 2026-03-29 04:37:58,380 | INFO     | [monitor] control thread has ended
[2026-03-29 06:38:08] 2026-03-29 04:38:02,782 | INFO     | all workflow threads have been joined
[2026-03-29 06:38:08] 2026-03-29 04:38:02,782 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 06:38:08] 2026-03-29 04:38:02,783 | INFO     | traces error code: 0
[2026-03-29 06:38:08] 2026-03-29 04:38:02,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 06:38:08] 2026-03-29 04:38:03,166 [wrapper] ==== pilot stdout END ====
[2026-03-29 06:38:08] 2026-03-29 04:38:03,274 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 06:38:08] 2026-03-29 04:38:03,328 [wrapper] pilotpid: 19567
[2026-03-29 06:38:08] 2026-03-29 04:38:03,447 [wrapper] Pilot exit status: 0
[2026-03-29 06:38:08] 2026-03-29 04:38:03,987 [wrapper] pandaids: 7071865093
[2026-03-29 06:38:08] 2026-03-29 04:38:05,059 [wrapper] cleanup supervisor_pilot 31028 19568
[2026-03-29 06:38:08] 2026-03-29 04:38:05,143 [wrapper] Test setup, not cleaning
[2026-03-29 06:38:08] 2026-03-29 04:38:05,292 [wrapper] apfmon messages muted
[2026-03-29 06:38:08] 2026-03-29 04:38:05,375 [wrapper] ==== wrapper stdout END ====
[2026-03-29 06:38:08] 2026-03-29 04:38:05,419 [wrapper] ==== wrapper stderr END ====
[2026-03-29 06:38:08]  *** Error codes and diagnostics ***
[2026-03-29 06:38:08]     "exeErrorCode": 0,
[2026-03-29 06:38:08]     "exeErrorDiag": "",
[2026-03-29 06:38:08]     "pilotErrorCode": 0,
[2026-03-29 06:38:08]     "pilotErrorDiag": "",
[2026-03-29 06:38:08]  *** Listing of results directory ***
[2026-03-29 06:38:08] total 481128
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc      5118 Mar 28 06:04 queuedata.json
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc    585013 Mar 28 06:04 pilot3.tar.gz
[2026-03-29 06:38:08] -rwx------. 1 boinc boinc     36322 Mar 28 06:04 runpilot2-wrapper.sh
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc       100 Mar 28 17:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 06:38:08] -rwxr-xr-x. 1 boinc boinc      7986 Mar 28 17:56 run_atlas
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc       105 Mar 28 17:56 job.xml
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc      6391 Mar 28 17:56 init_data.xml
[2026-03-29 06:38:08] -rw-r--r--. 2 boinc boinc 240215715 Mar 28 17:56 EVNT.49133299._000009.pool.root.1
[2026-03-29 06:38:08] -rw-r--r--. 2 boinc boinc     15845 Mar 28 17:56 start_atlas.sh
[2026-03-29 06:38:08] drwxrwx--x. 2 boinc boinc        68 Mar 28 17:56 shared
[2026-03-29 06:38:08] -rw-r--r--. 2 boinc boinc    597553 Mar 28 17:56 input.tar.gz
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc         0 Mar 28 17:56 boinc_lockfile
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc      2609 Mar 28 17:56 pandaJob.out
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc       415 Mar 28 18:01 workernode_map.json
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc   1003337 Mar 28 18:01 agis_schedconf.cvmfs.json
[2026-03-29 06:38:08] drwx------. 5 boinc boinc      4096 Mar 28 18:01 pilot3
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc 235427558 Mar 29 06:35 HITS.49176275._000426.pool.root.1
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc       531 Mar 29 06:35 boinc_task_state.xml
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc      1016 Mar 29 06:36 memory_monitor_summary.json
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc   1511579 Mar 29 06:36 agis_ddmendpoints.agis.ALL.json
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc    837174 Mar 29 06:36 log.49176275._000426.job.log.tgz.1
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc      6321 Mar 29 06:36 heartbeat.json
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc        95 Mar 29 06:37 pilot_heartbeat.json
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc      8192 Mar 29 06:37 boinc_mmap_file
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc        29 Mar 29 06:37 wrapper_checkpoint.txt
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc      4881 Mar 29 06:38 pilotlog.txt
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc   5719717 Mar 29 06:38 log.49176275._000426.job.log.1
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc       357 Mar 29 06:38 output.list
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc       620 Mar 29 06:38 runtime_log
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc   6574080 Mar 29 06:38 result.tar.gz
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc      8832 Mar 29 06:38 runtime_log.err
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc       658 Mar 29 06:38 FSVKDmZ1aQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm8vGKDmSYaKKm.diag
[2026-03-29 06:38:08] -rw-r--r--. 1 boinc boinc     20739 Mar 29 06:38 stderr.txt
[2026-03-29 06:38:08] HITS file was successfully produced:
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc 235427558 Mar 29 06:35 shared/HITS.pool.root.1
[2026-03-29 06:38:08]  *** Contents of shared directory: ***
[2026-03-29 06:38:08] total 471520
[2026-03-29 06:38:08] -rw-r--r--. 2 boinc boinc 240215715 Mar 28 17:56 ATLAS.root_0
[2026-03-29 06:38:08] -rw-r--r--. 2 boinc boinc     15845 Mar 28 17:56 start_atlas.sh
[2026-03-29 06:38:08] -rw-r--r--. 2 boinc boinc    597553 Mar 28 17:56 input.tar.gz
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc 235427558 Mar 29 06:35 HITS.pool.root.1
[2026-03-29 06:38:08] -rw-------. 1 boinc boinc   6574080 Mar 29 06:38 result.tar.gz
06:38:09 (15429): run_atlas exited; CPU time 161796.062877
06:38:09 (15429): called boinc_finish(0)

</stderr_txt>
]]>

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