Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:14:59 (3056): wrapper (7.7.26015): starting
16:14:59 (3056): wrapper: running run_atlas (--nthreads 8)
[2026-03-28 16:14:59] Arguments: --nthreads 8
[2026-03-28 16:14:59] Threads: 8
[2026-03-28 16:14:59] Checking for CVMFS
[2026-03-28 16:14:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 16:15:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 16:15:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 16:15:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 16:15:02] 2.11.2.0 23466 147884 138372 157804 3 13 21604086 25165824 4688 130560 157 44809866 99.809 34347322 1027 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-28 16:15:02] CVMFS is ok
[2026-03-28 16:15:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 16:15:02] Checking for apptainer binary...
[2026-03-28 16:15:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-28 16:15:02] Running /usr/bin/apptainer --version
[2026-03-28 16:15:03] apptainer version 1.3.2-1.el7
[2026-03-28 16:15:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 16:15:17] cg-vwn389.simple-grid.lan
[2026-03-28 16:15:17] apptainer works
[2026-03-28 16:15:17] Set ATHENA_PROC_NUMBER=8
[2026-03-28 16:15:17] Set ATHENA_CORE_NUMBER=8
[2026-03-28 16:15:17] Starting ATLAS job with PandaID=7065610066
[2026-03-28 16:15:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-28 21:31:19]  *** The last 200 lines of the pilot log: ***
[2026-03-28 21:31:19] 2026-03-28 20:30:33,950 | INFO     | total number of processed events: 400 (read)
[2026-03-28 21:31:19] 2026-03-28 20:30:33,952 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-7065610066/memory_monitor_summary.json (trf name=prmon)
[2026-03-28 21:31:19] 2026-03-28 20:30:33,953 | INFO     | extracted standard info from prmon json
[2026-03-28 21:31:19] 2026-03-28 20:30:33,953 | INFO     | extracted standard memory fields from prmon json
[2026-03-28 21:31:19] 2026-03-28 20:30:33,953 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-28 21:31:19] 2026-03-28 20:30:33,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-28 21:31:19] 2026-03-28 20:30:33,954 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-28 21:31:19] 2026-03-28 20:30:33,961 | INFO     | fitting pss+swap vs Time
[2026-03-28 21:31:19] 2026-03-28 20:30:33,961 | INFO     | sum of square deviations: 8456158550.0
[2026-03-28 21:31:19] 2026-03-28 20:30:33,974 | INFO     | sum of deviations: 92429250148.99997
[2026-03-28 21:31:19] 2026-03-28 20:30:33,975 | INFO     | mean x: 1774720641.0
[2026-03-28 21:31:19] 2026-03-28 20:30:33,975 | INFO     | mean y: 2475364.687707641
[2026-03-28 21:31:19] 2026-03-28 20:30:33,975 | INFO     | intersect: -19395942616.91253
[2026-03-28 21:31:19] 2026-03-28 20:30:33,976 | INFO     | chi2: 7.912589295610913
[2026-03-28 21:31:19] 2026-03-28 20:30:33,976 | INFO     | sum of square deviations: 8041713570.0
[2026-03-28 21:31:19] 2026-03-28 20:30:33,979 | INFO     | sum of deviations: 111032266977.99997
[2026-03-28 21:31:19] 2026-03-28 20:30:33,980 | INFO     | mean x: 1774720488.5
[2026-03-28 21:31:19] 2026-03-28 20:30:33,980 | INFO     | mean y: 2482110.7364864866
[2026-03-28 21:31:19] 2026-03-28 20:30:33,980 | INFO     | intersect: -24501155997.6348
[2026-03-28 21:31:19] 2026-03-28 20:30:33,981 | INFO     | chi2: 7.20415191350962
[2026-03-28 21:31:19] 2026-03-28 20:30:33,985 | INFO     | current chi2=7.20415191350962 (change=8.95329399308341 %)
[2026-03-28 21:31:19] 2026-03-28 20:30:33,985 | INFO     | right removable region: 295
[2026-03-28 21:31:19] 2026-03-28 20:30:33,986 | INFO     | sum of square deviations: 8041713570.0
[2026-03-28 21:31:19] 2026-03-28 20:30:33,989 | INFO     | sum of deviations: -13943574376.500011
[2026-03-28 21:31:19] 2026-03-28 20:30:33,989 | INFO     | mean x: 1774720793.5
[2026-03-28 21:31:19] 2026-03-28 20:30:33,989 | INFO     | mean y: 2514482.8006756757
[2026-03-28 21:31:19] 2026-03-28 20:30:33,989 | INFO     | intersect: 3079713287.0461206
[2026-03-28 21:31:19] 2026-03-28 20:30:33,990 | INFO     | chi2: 3.0135097469490164
[2026-03-28 21:31:19] 2026-03-28 20:30:33,990 | INFO     | current chi2=3.0135097469490164 (change=61.91499856285224 %)
[2026-03-28 21:31:19] 2026-03-28 20:30:33,991 | INFO     | sum of square deviations: 7641036290.0
[2026-03-28 21:31:19] 2026-03-28 20:30:33,994 | INFO     | sum of deviations: -78562219823.0
[2026-03-28 21:31:19] 2026-03-28 20:30:33,994 | INFO     | mean x: 1774720946.0
[2026-03-28 21:31:19] 2026-03-28 20:30:33,994 | INFO     | mean y: 2538995.47766323
[2026-03-28 21:31:19] 2026-03-28 20:30:33,994 | INFO     | intersect: 18249542646.880886
[2026-03-28 21:31:19] 2026-03-28 20:30:33,995 | INFO     | chi2: 1.0685264069465037
[2026-03-28 21:31:19] 2026-03-28 20:30:33,995 | INFO     | current chi2=1.0685264069465037 (change=64.54212872454394 %)
[2026-03-28 21:31:19] 2026-03-28 20:30:33,996 | INFO     | sum of square deviations: 7253894147.5
[2026-03-28 21:31:19] 2026-03-28 20:30:33,999 | INFO     | sum of deviations: -83687539893.49995
[2026-03-28 21:31:19] 2026-03-28 20:30:33,999 | INFO     | mean x: 1774721098.5
[2026-03-28 21:31:19] 2026-03-28 20:30:33,999 | INFO     | mean y: 2540989.437062937
[2026-03-28 21:31:19] 2026-03-28 20:30:33,999 | INFO     | intersect: 20477342483.713318
[2026-03-28 21:31:19] 2026-03-28 20:30:34,000 | INFO     | chi2: 1.0201300413864847
[2026-03-28 21:31:19] 2026-03-28 20:30:34,000 | INFO     | current chi2=1.0201300413864847 (change=4.529262472634615 %)
[2026-03-28 21:31:19] 2026-03-28 20:30:34,000 | INFO     | left removable region: 30
[2026-03-28 21:31:19] 2026-03-28 20:30:34,001 | INFO     | sum of square deviations: 5770452380.0
[2026-03-28 21:31:19] 2026-03-28 20:30:34,003 | INFO     | sum of deviations: -37106186722.999985
[2026-03-28 21:31:19] 2026-03-28 20:30:34,003 | INFO     | mean x: 1774721373.0
[2026-03-28 21:31:19] 2026-03-28 20:30:34,004 | INFO     | mean y: 2537941.7924528304
[2026-03-28 21:31:19] 2026-03-28 20:30:34,004 | INFO     | intersect: 11414666196.429728
[2026-03-28 21:31:19] 2026-03-28 20:30:34,004 | INFO     | chi2: 0.19349417417515863
[2026-03-28 21:31:19] 2026-03-28 20:30:34,005 | INFO     | current memory leak: -6.43 B/s (using 265 data points, chi2=0.19)
[2026-03-28 21:31:19] 2026-03-28 20:30:34,005 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-28 21:31:19] 2026-03-28 20:30:34,005 | INFO     | ..............................
[2026-03-28 21:31:19] 2026-03-28 20:30:34,005 | INFO     | . Timing measurements:
[2026-03-28 21:31:19] 2026-03-28 20:30:34,006 | INFO     | . get job = 0 s
[2026-03-28 21:31:19] 2026-03-28 20:30:34,006 | INFO     | . initial setup = 100 s
[2026-03-28 21:31:19] 2026-03-28 20:30:34,006 | INFO     | . payload setup = 126 s
[2026-03-28 21:31:19] 2026-03-28 20:30:34,006 | INFO     | . stage-in = 0 s
[2026-03-28 21:31:19] 2026-03-28 20:30:34,006 | INFO     | . payload execution = 18446 s
[2026-03-28 21:31:19] 2026-03-28 20:30:34,006 | INFO     | . stage-out = 3 s
[2026-03-28 21:31:19] 2026-03-28 20:30:34,006 | INFO     | . log creation = 1 s
[2026-03-28 21:31:19] 2026-03-28 20:30:34,006 | INFO     | ..............................
[2026-03-28 21:31:19] 2026-03-28 20:30:34,146 | INFO     | 
[2026-03-28 21:31:19] 2026-03-28 20:30:34,146 | INFO     | job summary report
[2026-03-28 21:31:19] 2026-03-28 20:30:34,146 | INFO     | --------------------------------------------------
[2026-03-28 21:31:19] 2026-03-28 20:30:34,146 | INFO     | PanDA job id: 7065610066
[2026-03-28 21:31:19] 2026-03-28 20:30:34,147 | INFO     | task id: 48967102
[2026-03-28 21:31:19] 2026-03-28 20:30:34,147 | INFO     | errors: (none)
[2026-03-28 21:31:19] 2026-03-28 20:30:34,147 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-28 21:31:19] 2026-03-28 20:30:34,147 | INFO     | pilot state: finished 
[2026-03-28 21:31:19] 2026-03-28 20:30:34,147 | INFO     | transexitcode: 0
[2026-03-28 21:31:19] 2026-03-28 20:30:34,147 | INFO     | exeerrorcode: 0
[2026-03-28 21:31:19] 2026-03-28 20:30:34,147 | INFO     | exeerrordiag: 
[2026-03-28 21:31:19] 2026-03-28 20:30:34,147 | INFO     | exitcode: 0
[2026-03-28 21:31:19] 2026-03-28 20:30:34,148 | INFO     | exitmsg: OK
[2026-03-28 21:31:19] 2026-03-28 20:30:34,148 | INFO     | cpuconsumptiontime: 68630 s
[2026-03-28 21:31:19] 2026-03-28 20:30:34,148 | INFO     | nevents: 400
[2026-03-28 21:31:19] 2026-03-28 20:30:34,148 | INFO     | neventsw: 0
[2026-03-28 21:31:19] 2026-03-28 20:30:34,148 | INFO     | pid: 11685
[2026-03-28 21:31:19] 2026-03-28 20:30:34,148 | INFO     | pgrp: 11685
[2026-03-28 21:31:19] 2026-03-28 20:30:34,148 | INFO     | corecount: 8
[2026-03-28 21:31:19] 2026-03-28 20:30:34,148 | INFO     | event service: False
[2026-03-28 21:31:19] 2026-03-28 20:30:34,149 | INFO     | sizes: {0: 2279768, 1: 2280285, 12: 2280285, 18576: 2312657, 18581: 2321657, 18583: 2321713, 18586: 2322035}
[2026-03-28 21:31:19] 2026-03-28 20:30:34,149 | INFO     | --------------------------------------------------
[2026-03-28 21:31:19] 2026-03-28 20:30:34,149 | INFO     | 
[2026-03-28 21:31:19] 2026-03-28 20:30:34,149 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-03-28 21:31:19] 2026-03-28 20:30:34,524 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,524 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,525 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,525 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,526 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-28 21:31:19] 2026-03-28 20:30:34,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,527 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-28 21:31:19] 2026-03-28 20:30:34,527 | INFO     | job 7065610066 has completed (purged errors)
[2026-03-28 21:31:19] 2026-03-28 20:30:34,527 | INFO     | overall cleanup function is called
[2026-03-28 21:31:19] 2026-03-28 20:30:35,536 | INFO     | --- collectZombieJob: --- 10, [11685]
[2026-03-28 21:31:19] 2026-03-28 20:30:35,536 | INFO     | zombie collector waiting for pid 11685
[2026-03-28 21:31:19] 2026-03-28 20:30:35,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-28 21:31:19] 2026-03-28 20:30:35,537 | INFO     | collected zombie processes
[2026-03-28 21:31:19] 2026-03-28 20:30:35,537 | INFO     | will attempt to kill all subprocesses of pid=11685
[2026-03-28 21:31:19] 2026-03-28 20:30:35,661 | INFO     | process IDs to be killed: [11685] (in reverse order)
[2026-03-28 21:31:19] 2026-03-28 20:30:36,351 | WARNING  | found no corresponding commands to process id(s)
[2026-03-28 21:31:19] 2026-03-28 20:30:36,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-28 21:31:19] 2026-03-28 20:30:36,355 | INFO     | did not find any defunct processes belonging to 11685
[2026-03-28 21:31:19] 2026-03-28 20:30:36,358 | INFO     | did not find any defunct processes belonging to 11685
[2026-03-28 21:31:19] 2026-03-28 20:30:36,359 | INFO     | ready for new job
[2026-03-28 21:31:19] 2026-03-28 20:30:36,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-28 21:31:19] 2026-03-28 20:30:36,361 | INFO     | **************************************
[2026-03-28 21:31:19] 2026-03-28 20:30:36,361 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-28 21:31:19] 2026-03-28 20:30:36,362 | INFO     | **************************************
[2026-03-28 21:31:19] 2026-03-28 20:30:36,362 | INFO     | 
[2026-03-28 21:31:19] 2026-03-28 20:30:36,362 | INFO     | pilot is running in a VM
[2026-03-28 21:31:19] 2026-03-28 20:30:36,363 | INFO     | architecture information:
[2026-03-28 21:31:19] 2026-03-28 20:30:36,373 | INFO     | executing command: cat /etc/os-release
[2026-03-28 21:31:19] 2026-03-28 20:30:36,587 | INFO     | cat /etc/os-release:
[2026-03-28 21:31:19] NAME="CentOS Linux"
[2026-03-28 21:31:19] VERSION="7 (Core)"
[2026-03-28 21:31:19] ID="centos"
[2026-03-28 21:31:19] ID_LIKE="rhel fedora"
[2026-03-28 21:31:19] VERSION_ID="7"
[2026-03-28 21:31:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-28 21:31:19] ANSI_COLOR="0;31"
[2026-03-28 21:31:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-28 21:31:19] HOME_URL="https://www.centos.org/"
[2026-03-28 21:31:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-28 21:31:19] 
[2026-03-28 21:31:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-28 21:31:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-28 21:31:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-28 21:31:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-28 21:31:19] 
[2026-03-28 21:31:19] 2026-03-28 20:30:36,587 | INFO     | **************************************
[2026-03-28 21:31:19] 2026-03-28 20:30:37,090 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-03-28 21:31:19] 2026-03-28 20:30:37,301 | INFO     | sufficient remaining disk space (496417898496 B)
[2026-03-28 21:31:19] 2026-03-28 20:30:37,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-28 21:31:19] 2026-03-28 20:30:37,301 | INFO     | current server update state: UPDATING_FINAL
[2026-03-28 21:31:19] 2026-03-28 20:30:37,301 | INFO     | update_server=False
[2026-03-28 21:31:19] 2026-03-28 20:30:37,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-28 21:31:19] 2026-03-28 20:30:37,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-28 21:31:19] 2026-03-28 20:30:37,576 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-28 21:31:19] 2026-03-28 20:30:37,576 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-28 21:31:19] 2026-03-28 20:30:37,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-28 21:31:19] 2026-03-28 20:30:37,577 | INFO     | will abort loop
[2026-03-28 21:31:19] 2026-03-28 20:30:37,667 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-28 21:31:19] 2026-03-28 20:30:37,893 | INFO     | all payload control threads have been joined
[2026-03-28 21:31:19] 2026-03-28 20:30:37,996 | INFO     | all data control threads have been joined
[2026-03-28 21:31:19] 2026-03-28 20:30:38,311 | INFO     | [job] retrieve thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:38,582 | INFO     | [job] job monitor thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:38,665 | INFO     | [job] validate thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:38,715 | INFO     | [payload] validate_post thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:38,878 | INFO     | [job] create_data_payload thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:38,890 | INFO     | [data] copytool_in thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:38,899 | INFO     | [payload] control thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:39,001 | INFO     | [data] control thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:39,013 | INFO     | all job control threads have been joined
[2026-03-28 21:31:19] 2026-03-28 20:30:39,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-28 21:31:19] 2026-03-28 20:30:39,266 | INFO     | [payload] execute_payloads thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:39,406 | INFO     | [payload] validate_pre thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:39,500 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:39,585 | INFO     | [payload] failed_post thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:39,678 | INFO     | [data] copytool_out thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:40,019 | INFO     | [job] control thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:40,167 | INFO     | [job] queue monitor thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:30:41,577 | INFO     | [data] queue_monitor thread has finished
[2026-03-28 21:31:19] 2026-03-28 20:31:07,158 | INFO     | PID=7152 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-28 21:31:19] 2026-03-28 20:31:07,158 | INFO     | .. there are 9 such processes running
[2026-03-28 21:31:19] 2026-03-28 20:31:07,159 | INFO     | found 0 job(s) in 20 queues
[2026-03-28 21:31:19] 2026-03-28 20:31:07,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-28 21:31:19] 2026-03-28 20:31:07,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-28 21:31:19] 2026-03-28 20:31:07,921 | INFO     | [monitor] cgroup control has ended
[2026-03-28 21:31:19] 2026-03-28 20:31:09,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735283197760)>', '<ExcThread(monitor, started 139734974179072)>']
[2026-03-28 21:31:19] 2026-03-28 20:31:10,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-28 21:31:19] 2026-03-28 20:31:10,177 | INFO     | [monitor] control thread has ended
[2026-03-28 21:31:19] 2026-03-28 20:31:14,643 | INFO     | all workflow threads have been joined
[2026-03-28 21:31:19] 2026-03-28 20:31:14,643 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-28 21:31:19] 2026-03-28 20:31:14,643 | INFO     | traces error code: 0
[2026-03-28 21:31:19] 2026-03-28 20:31:14,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-28 21:31:19] 2026-03-28 20:31:14,820 [wrapper] ==== pilot stdout END ====
[2026-03-28 21:31:19] 2026-03-28 20:31:14,826 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-28 21:31:19] 2026-03-28 20:31:14,887 [wrapper] pilotpid: 7152
[2026-03-28 21:31:19] 2026-03-28 20:31:14,936 [wrapper] Pilot exit status: 0
[2026-03-28 21:31:19] 2026-03-28 20:31:15,431 [wrapper] pandaids: 7065610066
[2026-03-28 21:31:19] 2026-03-28 20:31:16,366 [wrapper] cleanup supervisor_pilot 24287 7153
[2026-03-28 21:31:19] 2026-03-28 20:31:16,448 [wrapper] Test setup, not cleaning
[2026-03-28 21:31:19] 2026-03-28 20:31:16,560 [wrapper] apfmon messages muted
[2026-03-28 21:31:19] 2026-03-28 20:31:16,650 [wrapper] ==== wrapper stdout END ====
[2026-03-28 21:31:19] 2026-03-28 20:31:16,758 [wrapper] ==== wrapper stderr END ====
[2026-03-28 21:31:19]  *** Error codes and diagnostics ***
[2026-03-28 21:31:19]     "exeErrorCode": 0,
[2026-03-28 21:31:19]     "exeErrorDiag": "",
[2026-03-28 21:31:19]     "pilotErrorCode": 0,
[2026-03-28 21:31:19]     "pilotErrorDiag": "",
[2026-03-28 21:31:19]  *** Listing of results directory ***
[2026-03-28 21:31:19] total 411844
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc    585013 Mar 28 05:11 pilot3.tar.gz
[2026-03-28 21:31:19] -rwx------. 1 boinc boinc     36322 Mar 28 05:16 runpilot2-wrapper.sh
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc      5118 Mar 28 05:17 queuedata.json
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc       100 Mar 28 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-28 21:31:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar 28 16:14 run_atlas
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc       105 Mar 28 16:14 job.xml
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc      6391 Mar 28 16:14 init_data.xml
[2026-03-28 21:31:19] -rw-r--r--. 2 boinc boinc 214386981 Mar 28 16:14 EVNT.48967100._000161.pool.root.1
[2026-03-28 21:31:19] -rw-r--r--. 2 boinc boinc     15845 Mar 28 16:14 start_atlas.sh
[2026-03-28 21:31:19] drwxrwx--x. 2 boinc boinc        68 Mar 28 16:14 shared
[2026-03-28 21:31:19] -rw-r--r--. 2 boinc boinc    597531 Mar 28 16:14 input.tar.gz
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc         0 Mar 28 16:14 boinc_lockfile
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc      2579 Mar 28 16:15 pandaJob.out
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc       415 Mar 28 16:20 workernode_map.json
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc   1003337 Mar 28 16:20 agis_schedconf.cvmfs.json
[2026-03-28 21:31:19] drwx------. 5 boinc boinc      4096 Mar 28 16:20 pilot3
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc 197233811 Mar 28 21:29 HITS.48967102._004182.pool.root.1
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc       531 Mar 28 21:29 boinc_task_state.xml
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc      1018 Mar 28 21:30 memory_monitor_summary.json
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc   1511579 Mar 28 21:30 agis_ddmendpoints.agis.ALL.json
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc    519648 Mar 28 21:30 log.48967102._004182.job.log.tgz.1
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc      6323 Mar 28 21:30 heartbeat.json
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc        95 Mar 28 21:31 pilot_heartbeat.json
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc      8192 Mar 28 21:31 boinc_mmap_file
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc        28 Mar 28 21:31 wrapper_checkpoint.txt
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc      5066 Mar 28 21:31 pilotlog.txt
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc   2579636 Mar 28 21:31 log.48967102._004182.job.log.1
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc       357 Mar 28 21:31 output.list
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc       620 Mar 28 21:31 runtime_log
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc   3112960 Mar 28 21:31 result.tar.gz
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc      8832 Mar 28 21:31 runtime_log.err
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc       656 Mar 28 21:31 l4zMDm2GaQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmyNJKDmaYz9Nm.diag
[2026-03-28 21:31:19] -rw-r--r--. 1 boinc boinc     20716 Mar 28 21:31 stderr.txt
[2026-03-28 21:31:19] HITS file was successfully produced:
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc 197233811 Mar 28 21:29 shared/HITS.pool.root.1
[2026-03-28 21:31:19]  *** Contents of shared directory: ***
[2026-03-28 21:31:19] total 405616
[2026-03-28 21:31:19] -rw-r--r--. 2 boinc boinc 214386981 Mar 28 16:14 ATLAS.root_0
[2026-03-28 21:31:19] -rw-r--r--. 2 boinc boinc     15845 Mar 28 16:14 start_atlas.sh
[2026-03-28 21:31:19] -rw-r--r--. 2 boinc boinc    597531 Mar 28 16:14 input.tar.gz
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc 197233811 Mar 28 21:29 HITS.pool.root.1
[2026-03-28 21:31:19] -rw-------. 1 boinc boinc   3112960 Mar 28 21:31 result.tar.gz
21:31:20 (3056): run_atlas exited; CPU time 68921.036788
21:31:20 (3056): called boinc_finish(0)

</stderr_txt>
]]>

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