Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
00:40:50 (3117300): wrapper (7.7.26015): starting
00:40:50 (3117300): wrapper: running run_atlas (--nthreads 12)
[2026-04-03 00:40:50] Arguments: --nthreads 12
[2026-04-03 00:40:50] Threads: 12
[2026-04-03 00:40:50] Checking for CVMFS
[2026-04-03 00:40:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-03 00:40:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-03 00:40:52] Running cvmfs_config stat atlas.cern.ch
[2026-04-03 00:40:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-03 00:40:53] 2.13.3.0 1085729 12619 47728 158021 2 49 3937311 4096001 912 130560 0 1272810 99.955 457573 3744 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-03 00:40:53] CVMFS is ok
[2026-04-03 00:40:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 00:40:53] Checking for apptainer binary...
[2026-04-03 00:40:53] apptainer is not installed, using version from CVMFS
[2026-04-03 00:40:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 00:40:53] i3220
[2026-04-03 00:40:53] apptainer works
[2026-04-03 00:40:53] Set ATHENA_PROC_NUMBER=12
[2026-04-03 00:40:53] Set ATHENA_CORE_NUMBER=12
[2026-04-03 00:40:54] Starting ATLAS job with PandaID=7065609312
[2026-04-03 00:40:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 14:36:25]  *** The last 200 lines of the pilot log: ***
[2026-04-03 14:36:25] 2026-04-03 14:35:38,053 | INFO     | log transfer has been attempted: DONE
[2026-04-03 14:36:25] 2026-04-03 14:35:38,053 | INFO     | job 7065609312 has finished - writing final server update
[2026-04-03 14:36:25] 2026-04-03 14:35:38,053 | INFO     | total number of processed events: 400 (read)
[2026-04-03 14:36:25] 2026-04-03 14:35:38,070 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-7065609312/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 14:36:25] 2026-04-03 14:35:38,071 | INFO     | extracted standard info from prmon json
[2026-04-03 14:36:25] 2026-04-03 14:35:38,071 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 14:36:25] 2026-04-03 14:35:38,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 14:36:25] 2026-04-03 14:35:38,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 14:36:25] 2026-04-03 14:35:38,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 14:36:25] 2026-04-03 14:35:38,173 | INFO     | fitting pss+swap vs Time
[2026-04-03 14:36:25] 2026-04-03 14:35:38,174 | INFO     | sum of square deviations: 170345526731.66537
[2026-04-03 14:36:25] 2026-04-03 14:35:38,268 | INFO     | sum of deviations: 434548505963.1926
[2026-04-03 14:36:25] 2026-04-03 14:35:38,268 | INFO     | mean x: 1775201932.2551892
[2026-04-03 14:36:25] 2026-04-03 14:35:38,268 | INFO     | mean y: 2663932.0134310136
[2026-04-03 14:36:25] 2026-04-03 14:35:38,277 | INFO     | intersect: -4525845634.660551
[2026-04-03 14:36:25] 2026-04-03 14:35:38,279 | INFO     | chi2: 4.68254542240668
[2026-04-03 14:36:25] 2026-04-03 14:35:38,280 | INFO     | sum of square deviations: 167244723033.83743
[2026-04-03 14:36:25] 2026-04-03 14:35:38,358 | INFO     | sum of deviations: 549030926549.21655
[2026-04-03 14:36:25] 2026-04-03 14:35:38,365 | INFO     | mean x: 1775201779.7567568
[2026-04-03 14:36:25] 2026-04-03 14:35:38,365 | INFO     | mean y: 2669541.3243243243
[2026-04-03 14:36:25] 2026-04-03 14:35:38,368 | INFO     | intersect: -5824962328.139672
[2026-04-03 14:36:25] 2026-04-03 14:35:38,370 | INFO     | chi2: 3.1398678623151954
[2026-04-03 14:36:25] 2026-04-03 14:35:38,370 | INFO     | current chi2=3.1398678623151954 (change=32.945277000614695 %)
[2026-04-03 14:36:25] 2026-04-03 14:35:38,372 | INFO     | sum of square deviations: 164181780511.00574
[2026-04-03 14:36:25] 2026-04-03 14:35:38,441 | INFO     | sum of deviations: 545399032088.8878
[2026-04-03 14:36:25] 2026-04-03 14:35:38,444 | INFO     | mean x: 1775201627.2583437
[2026-04-03 14:36:25] 2026-04-03 14:35:38,444 | INFO     | mean y: 2669360.498145859
[2026-04-03 14:36:25] 2026-04-03 14:35:38,444 | INFO     | intersect: -5894411583.903097
[2026-04-03 14:36:25] 2026-04-03 14:35:38,451 | INFO     | chi2: 3.139292117669759
[2026-04-03 14:36:25] 2026-04-03 14:35:38,452 | INFO     | current chi2=3.139292117669759 (change=0.018336588375151806 %)
[2026-04-03 14:36:25] 2026-04-03 14:35:38,452 | INFO     | right removable region: 808
[2026-04-03 14:36:25] 2026-04-03 14:35:38,453 | INFO     | sum of square deviations: 167244595543.83762
[2026-04-03 14:36:25] 2026-04-03 14:35:38,525 | INFO     | sum of deviations: 197138317862.108
[2026-04-03 14:36:25] 2026-04-03 14:35:38,529 | INFO     | mean x: 1775202084.7567568
[2026-04-03 14:36:25] 2026-04-03 14:35:38,529 | INFO     | mean y: 2675598.843980344
[2026-04-03 14:36:25] 2026-04-03 14:35:38,529 | INFO     | intersect: -2089830599.7346387
[2026-04-03 14:36:25] 2026-04-03 14:35:38,530 | INFO     | chi2: 2.00251951197306
[2026-04-03 14:36:25] 2026-04-03 14:35:38,530 | INFO     | current chi2=2.00251951197306 (change=57.23438148852321 %)
[2026-04-03 14:36:25] 2026-04-03 14:35:38,534 | INFO     | sum of square deviations: 164181525531.0057
[2026-04-03 14:36:25] 2026-04-03 14:35:38,595 | INFO     | sum of deviations: 116390253462.2645
[2026-04-03 14:36:25] 2026-04-03 14:35:38,596 | INFO     | mean x: 1775202237.2583437
[2026-04-03 14:36:25] 2026-04-03 14:35:38,596 | INFO     | mean y: 2679615.25710754
[2026-04-03 14:36:25] 2026-04-03 14:35:38,596 | INFO     | intersect: -1255782551.378432
[2026-04-03 14:36:25] 2026-04-03 14:35:38,605 | INFO     | chi2: 1.69039642054224
[2026-04-03 14:36:25] 2026-04-03 14:35:38,605 | INFO     | current chi2=1.69039642054224 (change=15.586519360467484 %)
[2026-04-03 14:36:25] 2026-04-03 14:35:38,605 | INFO     | left removable region: 20
[2026-04-03 14:36:25] 2026-04-03 14:35:38,606 | INFO     | sum of square deviations: 151725107515.56738
[2026-04-03 14:36:25] 2026-04-03 14:35:38,683 | INFO     | sum of deviations: 174793574119.25504
[2026-04-03 14:36:25] 2026-04-03 14:35:38,683 | INFO     | mean x: 1775202206.7652285
[2026-04-03 14:36:25] 2026-04-03 14:35:38,684 | INFO     | mean y: 2688129.6662436547
[2026-04-03 14:36:25] 2026-04-03 14:35:38,684 | INFO     | intersect: -2042417941.3447535
[2026-04-03 14:36:25] 2026-04-03 14:35:38,685 | INFO     | chi2: 0.058385693576802254
[2026-04-03 14:36:25] 2026-04-03 14:35:38,697 | INFO     | time since job start (50023s) is within the limit (345600.0s)
[2026-04-03 14:36:25] 2026-04-03 14:35:38,685 | INFO     | current memory leak: 1.15 B/s (using 788 data points, chi2=0.06)
[2026-04-03 14:36:25] 2026-04-03 14:35:38,699 | INFO     | could have reported an average CPU frequency of 3299 MHz (31 samples)
[2026-04-03 14:36:25] 2026-04-03 14:35:38,699 | INFO     | ..............................
[2026-04-03 14:36:25] 2026-04-03 14:35:38,699 | INFO     | . Timing measurements:
[2026-04-03 14:36:25] 2026-04-03 14:35:38,699 | INFO     | . get job = 0 s
[2026-04-03 14:36:25] 2026-04-03 14:35:38,699 | INFO     | . initial setup = 20 s
[2026-04-03 14:36:25] 2026-04-03 14:35:38,699 | INFO     | . payload setup = 35 s
[2026-04-03 14:36:25] 2026-04-03 14:35:38,699 | INFO     | . stage-in = 0 s
[2026-04-03 14:36:25] 2026-04-03 14:35:38,700 | INFO     | . payload execution = 49957 s
[2026-04-03 14:36:25] 2026-04-03 14:35:38,700 | INFO     | . stage-out = 5 s
[2026-04-03 14:36:25] 2026-04-03 14:35:38,700 | INFO     | . log creation = 1 s
[2026-04-03 14:36:25] 2026-04-03 14:35:38,700 | INFO     | ..............................
[2026-04-03 14:36:25] 2026-04-03 14:35:39,511 | INFO     | 
[2026-04-03 14:36:25] 2026-04-03 14:35:39,512 | INFO     | job summary report
[2026-04-03 14:36:25] 2026-04-03 14:35:39,512 | INFO     | --------------------------------------------------
[2026-04-03 14:36:25] 2026-04-03 14:35:39,512 | INFO     | PanDA job id: 7065609312
[2026-04-03 14:36:25] 2026-04-03 14:35:39,512 | INFO     | task id: 48967094
[2026-04-03 14:36:25] 2026-04-03 14:35:39,512 | INFO     | errors: (none)
[2026-04-03 14:36:25] 2026-04-03 14:35:39,512 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 14:36:25] 2026-04-03 14:35:39,512 | INFO     | pilot state: finished 
[2026-04-03 14:36:25] 2026-04-03 14:35:39,513 | INFO     | transexitcode: 0
[2026-04-03 14:36:25] 2026-04-03 14:35:39,513 | INFO     | exeerrorcode: 0
[2026-04-03 14:36:25] 2026-04-03 14:35:39,513 | INFO     | exeerrordiag: 
[2026-04-03 14:36:25] 2026-04-03 14:35:39,513 | INFO     | exitcode: 0
[2026-04-03 14:36:25] 2026-04-03 14:35:39,513 | INFO     | exitmsg: OK
[2026-04-03 14:36:25] 2026-04-03 14:35:39,513 | INFO     | cpuconsumptiontime: 87955 s
[2026-04-03 14:36:25] 2026-04-03 14:35:39,513 | INFO     | nevents: 400
[2026-04-03 14:36:25] 2026-04-03 14:35:39,513 | INFO     | neventsw: 0
[2026-04-03 14:36:25] 2026-04-03 14:35:39,513 | INFO     | pid: 3146449
[2026-04-03 14:36:25] 2026-04-03 14:35:39,514 | INFO     | pgrp: 3146449
[2026-04-03 14:36:25] 2026-04-03 14:35:39,514 | INFO     | corecount: 12
[2026-04-03 14:36:25] 2026-04-03 14:35:39,514 | INFO     | event service: False
[2026-04-03 14:36:25] 2026-04-03 14:35:39,514 | INFO     | sizes: {0: 2279090, 1: 2279798, 2: 2279798, 3: 2279826, 4: 2280315, 15: 2280315, 49997: 2329473, 50003: 2338517, 50006: 2338573, 50008: 2338767}
[2026-04-03 14:36:25] 2026-04-03 14:35:39,514 | INFO     | --------------------------------------------------
[2026-04-03 14:36:25] 2026-04-03 14:35:39,514 | INFO     | 
[2026-04-03 14:36:25] 2026-04-03 14:35:39,525 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-04-03 14:36:25] 2026-04-03 14:35:39,595 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,595 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,595 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,595 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,605 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,606 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 14:36:25] 2026-04-03 14:35:39,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,606 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 14:36:25] 2026-04-03 14:35:39,607 | INFO     | job 7065609312 has completed (purged errors)
[2026-04-03 14:36:25] 2026-04-03 14:35:39,607 | INFO     | overall cleanup function is called
[2026-04-03 14:36:25] 2026-04-03 14:35:40,739 | INFO     | --- collectZombieJob: --- 10, [3146449]
[2026-04-03 14:36:25] 2026-04-03 14:35:40,740 | INFO     | zombie collector waiting for pid 3146449
[2026-04-03 14:36:25] 2026-04-03 14:35:40,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 14:36:25] 2026-04-03 14:35:40,740 | INFO     | collected zombie processes
[2026-04-03 14:36:25] 2026-04-03 14:35:40,740 | INFO     | will attempt to kill all subprocesses of pid=3146449
[2026-04-03 14:36:25] 2026-04-03 14:35:41,102 | INFO     | process IDs to be killed: [3146449] (in reverse order)
[2026-04-03 14:36:25] 2026-04-03 14:35:41,238 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 14:36:25] 2026-04-03 14:35:41,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 14:36:25] 2026-04-03 14:35:41,252 | INFO     | did not find any defunct processes belonging to 3146449
[2026-04-03 14:36:25] 2026-04-03 14:35:41,261 | INFO     | did not find any defunct processes belonging to 3146449
[2026-04-03 14:36:25] 2026-04-03 14:35:41,269 | INFO     | ready for new job
[2026-04-03 14:36:25] 2026-04-03 14:35:41,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 14:36:25] 2026-04-03 14:35:41,283 | INFO     | **************************************
[2026-04-03 14:36:25] 2026-04-03 14:35:41,283 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 14:36:25] 2026-04-03 14:35:41,283 | INFO     | **************************************
[2026-04-03 14:36:25] 2026-04-03 14:35:41,283 | INFO     | 
[2026-04-03 14:36:25] 2026-04-03 14:35:41,284 | INFO     | architecture information:
[2026-04-03 14:36:25] 2026-04-03 14:35:41,292 | INFO     | executing command: cat /etc/os-release
[2026-04-03 14:36:25] 2026-04-03 14:35:41,354 | INFO     | cat /etc/os-release:
[2026-04-03 14:36:25] NAME="CentOS Linux"
[2026-04-03 14:36:25] VERSION="7 (Core)"
[2026-04-03 14:36:25] ID="centos"
[2026-04-03 14:36:25] ID_LIKE="rhel fedora"
[2026-04-03 14:36:25] VERSION_ID="7"
[2026-04-03 14:36:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 14:36:25] ANSI_COLOR="0;31"
[2026-04-03 14:36:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 14:36:25] HOME_URL="https://www.centos.org/"
[2026-04-03 14:36:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 14:36:25] 
[2026-04-03 14:36:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 14:36:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 14:36:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 14:36:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 14:36:25] 
[2026-04-03 14:36:25] 2026-04-03 14:35:41,354 | INFO     | **************************************
[2026-04-03 14:36:25] 2026-04-03 14:35:41,862 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-04-03 14:36:25] 2026-04-03 14:35:41,913 | INFO     | sufficient remaining disk space (261927993344 B)
[2026-04-03 14:36:25] 2026-04-03 14:35:41,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 14:36:25] 2026-04-03 14:35:41,914 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 14:36:25] 2026-04-03 14:35:41,914 | INFO     | update_server=False
[2026-04-03 14:36:25] 2026-04-03 14:35:41,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 14:36:25] 2026-04-03 14:35:42,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 14:36:25] 2026-04-03 14:35:42,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 14:36:25] 2026-04-03 14:35:42,629 | INFO     | aborting loop
[2026-04-03 14:36:25] 2026-04-03 14:35:42,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 14:36:25] 2026-04-03 14:35:42,867 | INFO     | all payload control threads have been joined
[2026-04-03 14:36:25] 2026-04-03 14:35:42,927 | INFO     | [job] retrieve thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:42,931 | INFO     | all data control threads have been joined
[2026-04-03 14:36:25] 2026-04-03 14:35:43,019 | INFO     | [data] copytool_in thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:43,029 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:43,329 | INFO     | all job control threads have been joined
[2026-04-03 14:36:25] 2026-04-03 14:35:43,501 | INFO     | [payload] failed_post thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:43,634 | INFO     | [job] job monitor thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:43,640 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:43,760 | INFO     | [payload] validate_post thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:43,776 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:43,872 | INFO     | [payload] control thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:43,936 | INFO     | [data] control thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:44,127 | INFO     | [job] validate thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:44,128 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:44,158 | INFO     | [data] copytool_out thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:44,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 14:36:25] 2026-04-03 14:35:44,334 | INFO     | [job] control thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:45,296 | INFO     | [job] queue monitor thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:35:46,782 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 14:36:25] 2026-04-03 14:36:12,127 | INFO     | PID=3128268 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-03 14:36:25] 2026-04-03 14:36:12,127 | INFO     | .. there are 2 such processes running
[2026-04-03 14:36:25] 2026-04-03 14:36:12,128 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 14:36:25] 2026-04-03 14:36:12,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 14:36:25] 2026-04-03 14:36:12,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 14:36:25] 2026-04-03 14:36:18,305 | INFO     | [monitor] cgroup control has ended
[2026-04-03 14:36:25] 2026-04-03 14:36:19,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124880494516032)>', '<ExcThread(monitor, started 124879714113280)>']
[2026-04-03 14:36:25] 2026-04-03 14:36:20,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 14:36:25] 2026-04-03 14:36:20,173 | INFO     | [monitor] control thread has ended
[2026-04-03 14:36:25] 2026-04-03 14:36:24,880 | INFO     | all workflow threads have been joined
[2026-04-03 14:36:25] 2026-04-03 14:36:24,880 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 14:36:25] 2026-04-03 14:36:24,880 | INFO     | traces error code: 0
[2026-04-03 14:36:25] 2026-04-03 14:36:24,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 14:36:25] 2026-04-03 14:36:25,317 [wrapper] ==== pilot stdout END ====
[2026-04-03 14:36:25] 2026-04-03 14:36:25,330 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 14:36:25] 2026-04-03 14:36:25,341 [wrapper] pilotpid: 3128268
[2026-04-03 14:36:25] 2026-04-03 14:36:25,349 [wrapper] Pilot exit status: 0
[2026-04-03 14:36:25] 2026-04-03 14:36:25,400 [wrapper] pandaids: 7065609312
[2026-04-03 14:36:25] 2026-04-03 14:36:25,490 [wrapper] cleanup supervisor_pilot  357390 3128269
[2026-04-03 14:36:25] 2026-04-03 14:36:25,505 [wrapper] Test setup, not cleaning
[2026-04-03 14:36:25] 2026-04-03 14:36:25,518 [wrapper] apfmon messages muted
[2026-04-03 14:36:25] 2026-04-03 14:36:25,530 [wrapper] ==== wrapper stdout END ====
[2026-04-03 14:36:25] 2026-04-03 14:36:25,544 [wrapper] ==== wrapper stderr END ====
[2026-04-03 14:36:25]  *** Error codes and diagnostics ***
[2026-04-03 14:36:25]     "exeErrorCode": 0,
[2026-04-03 14:36:25]     "exeErrorDiag": "",
[2026-04-03 14:36:25]     "pilotErrorCode": 0,
[2026-04-03 14:36:25]     "pilotErrorDiag": "",
[2026-04-03 14:36:25]  *** Listing of results directory ***
[2026-04-03 14:36:25] total 439356
[2026-04-03 14:36:25] -rw-r--r-- 1 boinc boinc    585013 M&#195;&#164;r 28 04:11 pilot3.tar.gz
[2026-04-03 14:36:25] -rwx------ 1 boinc boinc     36322 M&#195;&#164;r 28 04:16 runpilot2-wrapper.sh
[2026-04-03 14:36:25] -rw-r--r-- 1 boinc boinc      5118 M&#195;&#164;r 28 04:16 queuedata.json
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc       100 Apr  3 00:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 14:36:25] -rwxr-xr-x 1 boinc boinc      7986 Apr  3 00:40 run_atlas
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc       105 Apr  3 00:40 job.xml
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc      9275 Apr  3 00:40 init_data.xml
[2026-04-03 14:36:25] -rw-r--r-- 2 boinc boinc 217751306 Apr  3 00:40 EVNT.48967092._000444.pool.root.1
[2026-04-03 14:36:25] drwxrwx--x 2 boinc boinc      4096 Apr  3 00:40 shared
[2026-04-03 14:36:25] -rw-r--r-- 2 boinc boinc    597552 Apr  3 00:40 input.tar.gz
[2026-04-03 14:36:25] -rw-r--r-- 2 boinc boinc     15845 Apr  3 00:40 start_atlas.sh
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc         0 Apr  3 00:40 boinc_lockfile
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc      2601 Apr  3 00:40 pandaJob.out
[2026-04-03 14:36:25] -rw------- 1 boinc boinc   1005191 Apr  3 00:41 agis_schedconf.cvmfs.json
[2026-04-03 14:36:25] -rw------- 1 boinc boinc       412 Apr  3 00:41 workernode_map.json
[2026-04-03 14:36:25] drwx------ 5 boinc boinc      4096 Apr  3 00:41 pilot3
[2026-04-03 14:36:25] -rw------- 1 boinc boinc 212188878 Apr  3 14:33 HITS.48967094._016375.pool.root.1
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc       530 Apr  3 14:33 boinc_task_state.xml
[2026-04-03 14:36:25] -rw------- 1 boinc boinc      1023 Apr  3 14:35 memory_monitor_summary.json
[2026-04-03 14:36:25] -rw------- 1 boinc boinc   1511579 Apr  3 14:35 agis_ddmendpoints.agis.ALL.json
[2026-04-03 14:36:25] -rw------- 1 boinc boinc   1021098 Apr  3 14:35 log.48967094._016375.job.log.tgz.1
[2026-04-03 14:36:25] -rw------- 1 boinc boinc      6315 Apr  3 14:35 heartbeat.json
[2026-04-03 14:36:25] -rw------- 1 boinc boinc        95 Apr  3 14:36 pilot_heartbeat.json
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc        28 Apr  3 14:36 wrapper_checkpoint.txt
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc      8192 Apr  3 14:36 boinc_mmap_file
[2026-04-03 14:36:25] -rw------- 1 boinc boinc      4843 Apr  3 14:36 pilotlog.txt
[2026-04-03 14:36:25] -rw------- 1 boinc boinc   6989609 Apr  3 14:36 log.48967094._016375.job.log.1
[2026-04-03 14:36:25] -rw------- 1 boinc boinc       357 Apr  3 14:36 output.list
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc       620 Apr  3 14:36 runtime_log
[2026-04-03 14:36:25] -rw------- 1 boinc boinc   8028160 Apr  3 14:36 result.tar.gz
[2026-04-03 14:36:25] -rw------- 1 boinc boinc       655 Apr  3 14:36 zmfMDm0GaQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmttGKDmG7WsUn.diag
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc      9152 Apr  3 14:36 runtime_log.err
[2026-04-03 14:36:25] -rw-rw-r-- 1 boinc boinc     20955 Apr  3 14:36 stderr.txt
[2026-04-03 14:36:25] HITS file was successfully produced:
[2026-04-03 14:36:25] -rw------- 1 boinc boinc 212188878 Apr  3 14:33 shared/HITS.pool.root.1
[2026-04-03 14:36:25]  *** Contents of shared directory: ***
[2026-04-03 14:36:25] total 428312
[2026-04-03 14:36:25] -rw-r--r-- 2 boinc boinc 217751306 Apr  3 00:40 ATLAS.root_0
[2026-04-03 14:36:25] -rw-r--r-- 2 boinc boinc    597552 Apr  3 00:40 input.tar.gz
[2026-04-03 14:36:25] -rw-r--r-- 2 boinc boinc     15845 Apr  3 00:40 start_atlas.sh
[2026-04-03 14:36:25] -rw------- 1 boinc boinc 212188878 Apr  3 14:33 HITS.pool.root.1
[2026-04-03 14:36:25] -rw------- 1 boinc boinc   8028160 Apr  3 14:36 result.tar.gz
14:36:27 (3117300): run_atlas exited; CPU time 88449.153865
14:36:27 (3117300): called boinc_finish(0)

</stderr_txt>
]]>

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