Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:11 (4174031): wrapper (7.7.26015): starting
00:02:11 (4174031): wrapper: running run_atlas (--nthreads 8)
[2026-03-28 00:02:11] Arguments: --nthreads 8
[2026-03-28 00:02:11] Threads: 8
[2026-03-28 00:02:11] Checking for CVMFS
[2026-03-28 00:02:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 00:02:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 00:02:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 00:02:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 00:02:14] 2.13.3.0 6048 205090 336820 157785 0 393 23255809 25181185 17508 16776704 0 1072640244 99.613 1031858380 28743 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-28 00:02:14] CVMFS is ok
[2026-03-28 00:02:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-28 00:02:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-28 00:02:14] Further information can be found at the LHC@home message board.
[2026-03-28 00:02:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 00:02:14] Checking for apptainer binary...
[2026-03-28 00:02:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-28 00:02:14] Running /usr/bin/apptainer --version
[2026-03-28 00:02:14] apptainer version 1.4.5-2.el9
[2026-03-28 00:02:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 00:02:15] c-16-35.aglt2.org
[2026-03-28 00:02:15] apptainer works
[2026-03-28 00:02:15] Set ATHENA_PROC_NUMBER=8
[2026-03-28 00:02:15] Set ATHENA_CORE_NUMBER=8
[2026-03-28 00:02:15] Starting ATLAS job with PandaID=7071840301
[2026-03-28 00:02:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 01:19:12]  *** The last 200 lines of the pilot log: ***
[2026-03-29 01:19:12] 2026-03-29 05:18:11,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 01:19:12] 2026-03-29 05:18:12,053 | INFO     | fitting pss+swap vs Time
[2026-03-29 01:19:12] 2026-03-29 05:18:12,246 | INFO     | sum of square deviations: 1019504584901.9083
[2026-03-29 01:19:12] 2026-03-29 05:18:13,168 | INFO     | monitor loop #5116: job 0:7071840301 is in state 'finished'
[2026-03-29 01:19:12] 2026-03-29 05:18:13,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 01:19:12] 2026-03-29 05:18:14,402 | INFO     | sum of deviations: 1991120981891.4321
[2026-03-29 01:19:12] 2026-03-29 05:18:14,403 | INFO     | mean x: 1774716115.0524547
[2026-03-29 01:19:12] 2026-03-29 05:18:14,403 | INFO     | mean y: 2498723.827841291
[2026-03-29 01:19:12] 2026-03-29 05:18:14,403 | INFO     | intersect: -3463571508.6290183
[2026-03-29 01:19:12] 2026-03-29 05:18:14,450 | INFO     | chi2: 7.034221752167234
[2026-03-29 01:19:12] 2026-03-29 05:18:14,452 | INFO     | sum of square deviations: 1009254726318.0739
[2026-03-29 01:19:12] 2026-03-29 05:18:15,485 | INFO     | sum of deviations: 2170961230611.0679
[2026-03-29 01:19:12] 2026-03-29 05:18:15,485 | INFO     | mean x: 1774715962.5546558
[2026-03-29 01:19:12] 2026-03-29 05:18:15,485 | INFO     | mean y: 2501393.8016194333
[2026-03-29 01:19:12] 2026-03-29 05:18:15,485 | INFO     | intersect: -3815008150.204728
[2026-03-29 01:19:12] 2026-03-29 05:18:15,487 | INFO     | chi2: 5.654180407124812
[2026-03-29 01:19:12] 2026-03-29 05:18:15,488 | INFO     | current chi2=5.654180407124812 (change=19.61896274619481 %)
[2026-03-29 01:19:12] 2026-03-29 05:18:15,488 | INFO     | right removable region: 1481
[2026-03-29 01:19:12] 2026-03-29 05:18:15,490 | INFO     | sum of square deviations: 1009254043179.9626
[2026-03-29 01:19:12] 2026-03-29 05:18:16,008 | INFO     | monitor loop #5117: job 0:7071840301 is in state 'finished'
[2026-03-29 01:19:12] 2026-03-29 05:18:16,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 01:19:12] 2026-03-29 05:18:16,392 | INFO     | sum of deviations: 1498801471062.7148
[2026-03-29 01:19:12] 2026-03-29 05:18:16,392 | INFO     | mean x: 1774716267.5553308
[2026-03-29 01:19:12] 2026-03-29 05:18:16,393 | INFO     | mean y: 2506046.4790823213
[2026-03-29 01:19:12] 2026-03-29 05:18:16,393 | INFO     | intersect: -2633051740.4878993
[2026-03-29 01:19:12] 2026-03-29 05:18:16,425 | INFO     | chi2: 3.160010931011633
[2026-03-29 01:19:12] 2026-03-29 05:18:16,425 | INFO     | current chi2=3.160010931011633 (change=55.07660914957596 %)
[2026-03-29 01:19:12] 2026-03-29 05:18:16,427 | INFO     | sum of square deviations: 999072885482.5579
[2026-03-29 01:19:12] 2026-03-29 05:18:17,671 | INFO     | sum of deviations: 1245345954507.343
[2026-03-29 01:19:12] 2026-03-29 05:18:17,672 | INFO     | mean x: 1774716420.0548408
[2026-03-29 01:19:12] 2026-03-29 05:18:17,672 | INFO     | mean y: 2509840.847664184
[2026-03-29 01:19:12] 2026-03-29 05:18:17,672 | INFO     | intersect: -2209677023.822917
[2026-03-29 01:19:12] 2026-03-29 05:18:17,674 | INFO     | chi2: 2.11952015868927
[2026-03-29 01:19:12] 2026-03-29 05:18:17,674 | INFO     | current chi2=2.11952015868927 (change=32.9268092749687 %)
[2026-03-29 01:19:12] 2026-03-29 05:18:17,722 | INFO     | sum of square deviations: 988960156213.3196
[2026-03-29 01:19:12] 2026-03-29 05:18:18,524 | INFO     | sum of deviations: 1078752714305.0226
[2026-03-29 01:19:12] 2026-03-29 05:18:18,524 | INFO     | mean x: 1774716572.5563858
[2026-03-29 01:19:12] 2026-03-29 05:18:18,524 | INFO     | mean y: 2512352.6202445654
[2026-03-29 01:19:12] 2026-03-29 05:18:18,524 | INFO     | intersect: -1933339468.8502584
[2026-03-29 01:19:12] 2026-03-29 05:18:18,537 | INFO     | chi2: 1.7251287110870637
[2026-03-29 01:19:12] 2026-03-29 05:18:18,538 | INFO     | current chi2=1.7251287110870637 (change=18.60758181446603 %)
[2026-03-29 01:19:12] 2026-03-29 05:18:18,538 | INFO     | left removable region: 30
[2026-03-29 01:19:12] 2026-03-29 05:18:18,552 | INFO     | sum of square deviations: 947232540304.6619
[2026-03-29 01:19:12] 2026-03-29 05:18:18,569 | INFO     | monitor loop #5118: job 0:7071840301 is in state 'finished'
[2026-03-29 01:19:12] 2026-03-29 05:18:18,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 01:19:12] 2026-03-29 05:18:18,976 | INFO     | sum of deviations: 1012009147383.0118
[2026-03-29 01:19:12] 2026-03-29 05:18:18,976 | INFO     | mean x: 1774716847.0606477
[2026-03-29 01:19:12] 2026-03-29 05:18:18,977 | INFO     | mean y: 2518876.306685045
[2026-03-29 01:19:12] 2026-03-29 05:18:18,977 | INFO     | intersect: -1893562188.0774097
[2026-03-29 01:19:12] 2026-03-29 05:18:19,024 | INFO     | chi2: 0.029960314772485012
[2026-03-29 01:19:12] 2026-03-29 05:18:19,024 | INFO     | current memory leak: 1.07 B/s (using 1451 data points, chi2=0.03)
[2026-03-29 01:19:12] 2026-03-29 05:18:19,025 | INFO     | could have reported an average CPU frequency of 2655 MHz (54 samples)
[2026-03-29 01:19:12] 2026-03-29 05:18:19,026 | INFO     | ..............................
[2026-03-29 01:19:12] 2026-03-29 05:18:19,026 | INFO     | . Timing measurements:
[2026-03-29 01:19:12] 2026-03-29 05:18:19,026 | INFO     | . get job = 0 s
[2026-03-29 01:19:12] 2026-03-29 05:18:19,026 | INFO     | . initial setup = 37 s
[2026-03-29 01:19:12] 2026-03-29 05:18:19,026 | INFO     | . payload setup = 100 s
[2026-03-29 01:19:12] 2026-03-29 05:18:19,026 | INFO     | . stage-in = 1 s
[2026-03-29 01:19:12] 2026-03-29 05:18:19,026 | INFO     | . payload execution = 90708 s
[2026-03-29 01:19:12] 2026-03-29 05:18:19,026 | INFO     | . stage-out = 10 s
[2026-03-29 01:19:12] 2026-03-29 05:18:19,026 | INFO     | . log creation = 4 s
[2026-03-29 01:19:12] 2026-03-29 05:18:19,027 | INFO     | ..............................
[2026-03-29 01:19:12] 2026-03-29 05:18:19,892 | INFO     | 
[2026-03-29 01:19:12] 2026-03-29 05:18:19,892 | INFO     | job summary report
[2026-03-29 01:19:12] 2026-03-29 05:18:19,892 | INFO     | --------------------------------------------------
[2026-03-29 01:19:12] 2026-03-29 05:18:19,892 | INFO     | PanDA job id: 7071840301
[2026-03-29 01:19:12] 2026-03-29 05:18:19,893 | INFO     | task id: 49180014
[2026-03-29 01:19:12] 2026-03-29 05:18:19,893 | INFO     | errors: (none)
[2026-03-29 01:19:12] 2026-03-29 05:18:19,893 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 01:19:12] 2026-03-29 05:18:19,953 | INFO     | pilot state: finished 
[2026-03-29 01:19:12] 2026-03-29 05:18:19,953 | INFO     | transexitcode: 0
[2026-03-29 01:19:12] 2026-03-29 05:18:19,954 | INFO     | exeerrorcode: 0
[2026-03-29 01:19:12] 2026-03-29 05:18:19,954 | INFO     | exeerrordiag: 
[2026-03-29 01:19:12] 2026-03-29 05:18:19,954 | INFO     | exitcode: 0
[2026-03-29 01:19:12] 2026-03-29 05:18:19,954 | INFO     | exitmsg: OK
[2026-03-29 01:19:12] 2026-03-29 05:18:19,954 | INFO     | cpuconsumptiontime: 114693 s
[2026-03-29 01:19:12] 2026-03-29 05:18:19,954 | INFO     | nevents: 400
[2026-03-29 01:19:12] 2026-03-29 05:18:19,954 | INFO     | neventsw: 0
[2026-03-29 01:19:12] 2026-03-29 05:18:19,954 | INFO     | pid: 22313
[2026-03-29 01:19:12] 2026-03-29 05:18:19,954 | INFO     | pgrp: 22313
[2026-03-29 01:19:12] 2026-03-29 05:18:19,955 | INFO     | corecount: 8
[2026-03-29 01:19:12] 2026-03-29 05:18:19,955 | INFO     | event service: False
[2026-03-29 01:19:12] 2026-03-29 05:18:19,955 | INFO     | sizes: {0: 2279850, 1: 2279906, 2: 2279962, 3: 2279962, 4: 2280423, 90813: 2345599, 90826: 2354597, 90831: 2354653, 90842: 2354847}
[2026-03-29 01:19:12] 2026-03-29 05:18:19,955 | INFO     | --------------------------------------------------
[2026-03-29 01:19:12] 2026-03-29 05:18:19,955 | INFO     | 
[2026-03-29 01:19:12] 2026-03-29 05:18:19,955 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-29 01:19:12] 2026-03-29 05:18:20,188 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,189 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,189 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,197 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,199 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 01:19:12] 2026-03-29 05:18:20,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,199 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 01:19:12] 2026-03-29 05:18:20,200 | INFO     | job 7071840301 has completed (purged errors)
[2026-03-29 01:19:12] 2026-03-29 05:18:20,200 | INFO     | overall cleanup function is called
[2026-03-29 01:19:12] 2026-03-29 05:18:20,730 | INFO     | PID=4189980 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-29 01:19:12] 2026-03-29 05:18:20,731 | INFO     | .. there are 29 such processes running
[2026-03-29 01:19:12] 2026-03-29 05:18:21,229 | INFO     | --- collectZombieJob: --- 10, [22313]
[2026-03-29 01:19:12] 2026-03-29 05:18:21,229 | INFO     | zombie collector waiting for pid 22313
[2026-03-29 01:19:12] 2026-03-29 05:18:21,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 01:19:12] 2026-03-29 05:18:21,229 | INFO     | collected zombie processes
[2026-03-29 01:19:12] 2026-03-29 05:18:21,229 | INFO     | will attempt to kill all subprocesses of pid=22313
[2026-03-29 01:19:12] 2026-03-29 05:18:24,575 | INFO     | process IDs to be killed: [22313] (in reverse order)
[2026-03-29 01:19:12] 2026-03-29 05:18:24,926 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 01:19:12] 2026-03-29 05:18:24,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 01:19:12] 2026-03-29 05:18:25,007 | INFO     | did not find any defunct processes belonging to 22313
[2026-03-29 01:19:12] 2026-03-29 05:18:25,042 | INFO     | did not find any defunct processes belonging to 22313
[2026-03-29 01:19:12] 2026-03-29 05:18:25,043 | INFO     | ready for new job
[2026-03-29 01:19:12] 2026-03-29 05:18:25,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 01:19:12] 2026-03-29 05:18:25,083 | INFO     | **************************************
[2026-03-29 01:19:12] 2026-03-29 05:18:25,083 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 01:19:12] 2026-03-29 05:18:25,083 | INFO     | **************************************
[2026-03-29 01:19:12] 2026-03-29 05:18:25,083 | INFO     | 
[2026-03-29 01:19:12] 2026-03-29 05:18:25,090 | INFO     | architecture information:
[2026-03-29 01:19:12] 2026-03-29 05:18:25,094 | INFO     | executing command: cat /etc/os-release
[2026-03-29 01:19:12] 2026-03-29 05:18:25,161 | INFO     | cat /etc/os-release:
[2026-03-29 01:19:12] NAME="CentOS Linux"
[2026-03-29 01:19:12] VERSION="7 (Core)"
[2026-03-29 01:19:12] ID="centos"
[2026-03-29 01:19:12] ID_LIKE="rhel fedora"
[2026-03-29 01:19:12] VERSION_ID="7"
[2026-03-29 01:19:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 01:19:12] ANSI_COLOR="0;31"
[2026-03-29 01:19:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 01:19:12] HOME_URL="https://www.centos.org/"
[2026-03-29 01:19:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 01:19:12] 
[2026-03-29 01:19:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 01:19:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 01:19:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 01:19:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 01:19:12] 
[2026-03-29 01:19:12] 2026-03-29 05:18:25,162 | INFO     | **************************************
[2026-03-29 01:19:12] 2026-03-29 05:18:25,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-29 01:19:12] 2026-03-29 05:18:25,711 | INFO     | sufficient remaining disk space (61557702656 B)
[2026-03-29 01:19:12] 2026-03-29 05:18:25,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 01:19:12] 2026-03-29 05:18:25,712 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 01:19:12] 2026-03-29 05:18:25,712 | INFO     | update_server=False
[2026-03-29 01:19:12] 2026-03-29 05:18:25,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 01:19:12] 2026-03-29 05:18:25,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 01:19:12] 2026-03-29 05:18:25,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 01:19:12] 2026-03-29 05:18:25,713 | INFO     | aborting loop
[2026-03-29 01:19:12] 2026-03-29 05:18:25,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 01:19:12] 2026-03-29 05:18:25,999 | INFO     | all data control threads have been joined
[2026-03-29 01:19:12] 2026-03-29 05:18:25,999 | INFO     | all payload control threads have been joined
[2026-03-29 01:19:12] 2026-03-29 05:18:26,717 | INFO     | [job] retrieve thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:26,718 | INFO     | [job] queue monitor thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:26,722 | INFO     | [job] job monitor thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,005 | INFO     | [data] control thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,006 | INFO     | [payload] control thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,147 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,297 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,305 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,328 | INFO     | all job control threads have been joined
[2026-03-29 01:19:12] 2026-03-29 05:18:27,440 | INFO     | [payload] failed_post thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,441 | INFO     | [payload] validate_post thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,442 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,838 | INFO     | [data] copytool_in thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:27,950 | INFO     | [data] copytool_out thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:28,226 | INFO     | [job] validate thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:28,336 | INFO     | [job] control thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:29,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 01:19:12] 2026-03-29 05:18:33,178 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 01:19:12] 2026-03-29 05:18:59,297 [wrapper] supervise_pilot (15 min periods counter: 102)
[2026-03-29 01:19:12] 2026-03-29 05:19:00,973 | INFO     | [monitor] cgroup control has ended
[2026-03-29 01:19:12] 2026-03-29 05:19:01,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140696055686976)>', '<ExcThread(monitor, started 140695704676096)>']
[2026-03-29 01:19:12] 2026-03-29 05:19:01,389 | INFO     | PID=4189980 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-29 01:19:12] 2026-03-29 05:19:01,484 | INFO     | .. there are 29 such processes running
[2026-03-29 01:19:12] 2026-03-29 05:19:01,485 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 01:19:12] 2026-03-29 05:19:01,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 01:19:12] 2026-03-29 05:19:01,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 01:19:12] 2026-03-29 05:19:01,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 01:19:12] 2026-03-29 05:19:01,485 | INFO     | [monitor] control thread has ended
[2026-03-29 01:19:12] 2026-03-29 05:19:06,246 | INFO     | all workflow threads have been joined
[2026-03-29 01:19:12] 2026-03-29 05:19:06,246 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 01:19:12] 2026-03-29 05:19:06,246 | INFO     | traces error code: 0
[2026-03-29 01:19:12] 2026-03-29 05:19:06,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 01:19:12] 2026-03-29 05:19:08,526 [wrapper] ==== pilot stdout END ====
[2026-03-29 01:19:12] 2026-03-29 05:19:08,542 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 01:19:12] 2026-03-29 05:19:08,559 [wrapper] pilotpid: 4189980
[2026-03-29 01:19:12] 2026-03-29 05:19:08,616 [wrapper] Pilot exit status: 0
[2026-03-29 01:19:12] 2026-03-29 05:19:08,921 [wrapper] pandaids: 7071840301
[2026-03-29 01:19:12] 2026-03-29 05:19:09,143 [wrapper] cleanup supervisor_pilot 1989220 4189981
[2026-03-29 01:19:12] 2026-03-29 05:19:09,166 [wrapper] Test setup, not cleaning
[2026-03-29 01:19:12] 2026-03-29 05:19:09,226 [wrapper] apfmon messages muted
[2026-03-29 01:19:12] 2026-03-29 05:19:09,243 [wrapper] ==== wrapper stdout END ====
[2026-03-29 01:19:12] 2026-03-29 05:19:09,267 [wrapper] ==== wrapper stderr END ====
[2026-03-29 01:19:13]  *** Error codes and diagnostics ***
[2026-03-29 01:19:13]     "exeErrorCode": 0,
[2026-03-29 01:19:13]     "exeErrorDiag": "",
[2026-03-29 01:19:13]     "pilotErrorCode": 0,
[2026-03-29 01:19:13]     "pilotErrorDiag": "",
[2026-03-29 01:19:13]  *** Listing of results directory ***
[2026-03-29 01:19:13] total 481208
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas    585013 Mar 27 22:21 pilot3.tar.gz
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas      5118 Mar 27 22:38 queuedata.json
[2026-03-29 01:19:13] -rwx------. 1 boincer umatlas     36322 Mar 27 22:39 runpilot2-wrapper.sh
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas       100 Mar 28 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 01:19:13] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 28 00:02 run_atlas
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas       105 Mar 28 00:02 job.xml
[2026-03-29 01:19:13] -rw-r--r--. 2 boincer umatlas 237947243 Mar 28 00:02 EVNT.49132557._000001.pool.root.1
[2026-03-29 01:19:13] -rw-r--r--. 2 boincer umatlas     15845 Mar 28 00:02 start_atlas.sh
[2026-03-29 01:19:13] drwxrwx--x. 2 boincer umatlas      4096 Mar 28 00:02 shared
[2026-03-29 01:19:13] -rw-r--r--. 2 boincer umatlas    597564 Mar 28 00:02 input.tar.gz
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas         0 Mar 28 00:02 boinc_lockfile
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas      2663 Mar 28 00:02 pandaJob.out
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas        57 Mar 28 00:02 setup.sh.local
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas   1005053 Mar 28 00:03 agis_schedconf.cvmfs.json
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas       441 Mar 28 00:04 workernode_map.json
[2026-03-29 01:19:13] drwx------. 5 boincer umatlas      4096 Mar 28 00:04 pilot3
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas      6613 Mar 29 01:09 init_data.xml
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas 226451379 Mar 29 01:15 HITS.49180014._000522.pool.root.1
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas       531 Mar 29 01:15 boinc_task_state.xml
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas      1064 Mar 29 01:17 memory_monitor_summary.json
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas   1511579 Mar 29 01:17 agis_ddmendpoints.agis.ALL.json
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas   1398628 Mar 29 01:17 log.49180014._000522.job.log.tgz.1
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas      6412 Mar 29 01:18 heartbeat.json
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas        95 Mar 29 01:19 pilot_heartbeat.json
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas      4820 Mar 29 01:19 pilotlog.txt
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas  10814149 Mar 29 01:19 log.49180014._000522.job.log.1
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas       357 Mar 29 01:19 output.list
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas       620 Mar 29 01:19 runtime_log
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas  12226560 Mar 29 01:19 result.tar.gz
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas      9337 Mar 29 01:19 runtime_log.err
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas       663 Mar 29 01:19 1H2MDm8kYQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmkuIKDm9NWlZn.diag
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas        29 Mar 29 01:19 wrapper_checkpoint.txt
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas      8192 Mar 29 01:19 boinc_mmap_file
[2026-03-29 01:19:13] -rw-r--r--. 1 boincer umatlas     21030 Mar 29 01:19 stderr.txt
[2026-03-29 01:19:13] HITS file was successfully produced:
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas 226451379 Mar 29 01:15 shared/HITS.pool.root.1
[2026-03-29 01:19:13]  *** Contents of shared directory: ***
[2026-03-29 01:19:13] total 466060
[2026-03-29 01:19:13] -rw-r--r--. 2 boincer umatlas 237947243 Mar 28 00:02 ATLAS.root_0
[2026-03-29 01:19:13] -rw-r--r--. 2 boincer umatlas     15845 Mar 28 00:02 start_atlas.sh
[2026-03-29 01:19:13] -rw-r--r--. 2 boincer umatlas    597564 Mar 28 00:02 input.tar.gz
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas 226451379 Mar 29 01:15 HITS.pool.root.1
[2026-03-29 01:19:13] -rw-------. 1 boincer umatlas  12226560 Mar 29 01:19 result.tar.gz
01:19:15 (4174031): run_atlas exited; CPU time 119512.048714
01:19:15 (4174031): called boinc_finish(0)

</stderr_txt>
]]>

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