Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:32:36 (1780021): wrapper (7.7.26015): starting
11:32:36 (1780021): wrapper: running run_atlas (--nthreads 4)
[2026-04-01 11:32:36] Arguments: --nthreads 4
[2026-04-01 11:32:36] Threads: 4
[2026-04-01 11:32:36] Checking for CVMFS
[2026-04-01 11:32:36] No cvmfs_config command found, will try listing directly
[2026-04-01 11:32:36] CVMFS is ok
[2026-04-01 11:32:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 11:32:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 11:32:36] Further information can be found at the LHC@home message board.
[2026-04-01 11:32:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 11:32:36] Checking for apptainer binary...
[2026-04-01 11:32:36] which: no apptainer in ((null))
[2026-04-01 11:32:36] apptainer is not installed, using version from CVMFS
[2026-04-01 11:32:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 11:32:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-01 11:32:36] apptainer works
[2026-04-01 11:32:36] Set ATHENA_PROC_NUMBER=4
[2026-04-01 11:32:36] Set ATHENA_CORE_NUMBER=4
[2026-04-01 11:32:36] Starting ATLAS job with PandaID=7071840728
[2026-04-01 11:32:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 18:06:33]  *** The last 200 lines of the pilot log: ***
[2026-04-01 18:06:33] 2026-04-01 16:00:44,174 | INFO     | preparing for final server update for job 7071840728 in state='finished'
[2026-04-01 18:06:33] 2026-04-01 16:00:44,175 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/1/PanDA_Pilot-7071840728/jobReport.json
[2026-04-01 18:06:33] 2026-04-01 16:00:44,177 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/1/workernode_map.json
[2026-04-01 18:06:33] 2026-04-01 16:00:44,177 | INFO     | this job has now completed (state=finished)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,177 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,178 | INFO     | log transfer has been attempted: DONE
[2026-04-01 18:06:33] 2026-04-01 16:00:44,178 | INFO     | job 7071840728 has finished - writing final server update
[2026-04-01 18:06:33] 2026-04-01 16:00:44,178 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2650689/.job.ad'
[2026-04-01 18:06:33] 2026-04-01 16:00:44,178 | INFO     | total number of processed events: 400 (read)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,203 | INFO     | using path: /var/lib/boinc/var/slot60/slots/1/PanDA_Pilot-7071840728/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,203 | INFO     | extracted standard info from prmon json
[2026-04-01 18:06:33] 2026-04-01 16:00:44,203 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 18:06:33] 2026-04-01 16:00:44,203 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 18:06:33] 2026-04-01 16:00:44,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 18:06:33] 2026-04-01 16:00:44,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 18:06:33] 2026-04-01 16:00:44,210 | INFO     | fitting pss+swap vs Time
[2026-04-01 18:06:33] 2026-04-01 16:00:44,211 | INFO     | sum of square deviations: 17149456430.0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,215 | INFO     | sum of deviations: 46288600110.0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,215 | INFO     | mean x: 1775047608.0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,215 | INFO     | mean y: 2348129.937007874
[2026-04-01 18:06:33] 2026-04-01 16:00:44,215 | INFO     | intersect: -4788734855.0135565
[2026-04-01 18:06:33] 2026-04-01 16:00:44,216 | INFO     | chi2: 1.3763713613255957
[2026-04-01 18:06:33] 2026-04-01 16:00:44,216 | INFO     | sum of square deviations: 16483099750.0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,220 | INFO     | sum of deviations: 45279865802.00001
[2026-04-01 18:06:33] 2026-04-01 16:00:44,220 | INFO     | mean x: 1775047455.5
[2026-04-01 18:06:33] 2026-04-01 16:00:44,220 | INFO     | mean y: 2347899.3936170214
[2026-04-01 18:06:33] 2026-04-01 16:00:44,220 | INFO     | intersect: -4873792620.063082
[2026-04-01 18:06:33] 2026-04-01 16:00:44,221 | INFO     | chi2: 1.376599813006852
[2026-04-01 18:06:33] 2026-04-01 16:00:44,221 | INFO     | current chi2=1.376599813006852 (change=-0.01659811353792396 %)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,221 | INFO     | right removable region: 375
[2026-04-01 18:06:33] 2026-04-01 16:00:44,221 | INFO     | sum of square deviations: 16483099750.0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,225 | INFO     | sum of deviations: -3950007846.9999986
[2026-04-01 18:06:33] 2026-04-01 16:00:44,225 | INFO     | mean x: 1775047760.5
[2026-04-01 18:06:33] 2026-04-01 16:00:44,225 | INFO     | mean y: 2359550.079787234
[2026-04-01 18:06:33] 2026-04-01 16:00:44,225 | INFO     | intersect: 427731760.9574636
[2026-04-01 18:06:33] 2026-04-01 16:00:44,226 | INFO     | chi2: 0.03367773347686643
[2026-04-01 18:06:33] 2026-04-01 16:00:44,226 | INFO     | current chi2=0.03367773347686643 (change=97.55315066680615 %)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,227 | INFO     | sum of square deviations: 15834231770.0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,230 | INFO     | sum of deviations: -5010891176.999996
[2026-04-01 18:06:33] 2026-04-01 16:00:44,230 | INFO     | mean x: 1775047913.0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,231 | INFO     | mean y: 2359793.514824798
[2026-04-01 18:06:33] 2026-04-01 16:00:44,231 | INFO     | intersect: 564090356.4623668
[2026-04-01 18:06:33] 2026-04-01 16:00:44,231 | INFO     | chi2: 0.02941572856392776
[2026-04-01 18:06:33] 2026-04-01 16:00:44,231 | INFO     | current chi2=0.02941572856392776 (change=12.655260532500748 %)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,232 | INFO     | left removable region: 20
[2026-04-01 18:06:33] 2026-04-01 16:00:44,232 | INFO     | sum of square deviations: 13872669410.0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,235 | INFO     | sum of deviations: 2410881771.999999
[2026-04-01 18:06:33] 2026-04-01 16:00:44,235 | INFO     | mean x: 1775048035.0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,236 | INFO     | mean y: 2357732.3380281692
[2026-04-01 18:06:33] 2026-04-01 16:00:44,236 | INFO     | intersect: -306121539.0645703
[2026-04-01 18:06:33] 2026-04-01 16:00:44,236 | INFO     | chi2: 0.020299070826823504
[2026-04-01 18:06:33] 2026-04-01 16:00:44,236 | INFO     | current memory leak: 0.17 B/s (using 355 data points, chi2=0.02)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | could have reported an average CPU frequency of 2701 MHz (16 samples)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | ..............................
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | . Timing measurements:
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | . get job = 0 s
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | . initial setup = 8 s
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | . payload setup = 17 s
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | . stage-in = 0 s
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | . payload execution = 23222 s
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | . stage-out = 1 s
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | . log creation = 0 s
[2026-04-01 18:06:33] 2026-04-01 16:00:44,237 | INFO     | ..............................
[2026-04-01 18:06:33] 2026-04-01 16:00:44,368 | INFO     | 
[2026-04-01 18:06:33] 2026-04-01 16:00:44,368 | INFO     | job summary report
[2026-04-01 18:06:33] 2026-04-01 16:00:44,368 | INFO     | --------------------------------------------------
[2026-04-01 18:06:33] 2026-04-01 16:00:44,368 | INFO     | PanDA job id: 7071840728
[2026-04-01 18:06:33] 2026-04-01 16:00:44,368 | INFO     | task id: 49179615
[2026-04-01 18:06:33] 2026-04-01 16:00:44,368 | INFO     | errors: (none)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,368 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | pilot state: finished 
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | transexitcode: 0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | exeerrorcode: 0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | exeerrordiag: 
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | exitcode: 0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | exitmsg: OK
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | cpuconsumptiontime: 89394 s
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | nevents: 400
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | neventsw: 0
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | pid: 1797596
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | pgrp: 1797596
[2026-04-01 18:06:33] 2026-04-01 16:00:44,369 | INFO     | corecount: 4
[2026-04-01 18:06:33] 2026-04-01 16:00:44,370 | INFO     | event service: False
[2026-04-01 18:06:33] 2026-04-01 16:00:44,370 | INFO     | sizes: {0: 2280190, 1: 2280278, 11: 2280278, 23243: 2316254, 23246: 2325274, 23248: 2325330, 23251: 2325652}
[2026-04-01 18:06:33] 2026-04-01 16:00:44,370 | INFO     | --------------------------------------------------
[2026-04-01 18:06:33] 2026-04-01 16:00:44,370 | INFO     | 
[2026-04-01 18:06:33] 2026-04-01 16:00:44,370 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/1
[2026-04-01 18:06:33] 2026-04-01 16:00:44,403 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,404 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,404 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,404 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,405 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 18:06:33] 2026-04-01 16:00:44,406 | INFO     | job 7071840728 has completed (purged errors)
[2026-04-01 18:06:33] 2026-04-01 16:00:44,406 | INFO     | overall cleanup function is called
[2026-04-01 18:06:33] 2026-04-01 16:00:45,415 | INFO     | --- collectZombieJob: --- 10, [1797596]
[2026-04-01 18:06:33] 2026-04-01 16:00:45,415 | INFO     | zombie collector waiting for pid 1797596
[2026-04-01 18:06:33] 2026-04-01 16:00:45,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 18:06:33] 2026-04-01 16:00:45,415 | INFO     | collected zombie processes
[2026-04-01 18:06:33] 2026-04-01 16:00:45,415 | INFO     | will attempt to kill all subprocesses of pid=1797596
[2026-04-01 18:06:33] 2026-04-01 16:00:46,261 | INFO     | process IDs to be killed: [1797596] (in reverse order)
[2026-04-01 18:06:33] 2026-04-01 16:00:46,544 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 18:06:33] 2026-04-01 16:00:46,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 18:06:33] 2026-04-01 16:00:46,577 | INFO     | did not find any defunct processes belonging to 1797596
[2026-04-01 18:06:33] 2026-04-01 16:00:46,607 | INFO     | did not find any defunct processes belonging to 1797596
[2026-04-01 18:06:33] 2026-04-01 16:00:46,607 | INFO     | ready for new job
[2026-04-01 18:06:33] 2026-04-01 16:00:46,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 18:06:33] 2026-04-01 16:00:46,611 | INFO     | **************************************
[2026-04-01 18:06:33] 2026-04-01 16:00:46,612 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 18:06:33] 2026-04-01 16:00:46,612 | INFO     | **************************************
[2026-04-01 18:06:33] 2026-04-01 16:00:46,612 | INFO     | 
[2026-04-01 18:06:33] 2026-04-01 16:00:46,620 | INFO     | architecture information:
[2026-04-01 18:06:33] 2026-04-01 16:00:46,621 | INFO     | executing command: cat /etc/os-release
[2026-04-01 18:06:33] 2026-04-01 16:00:46,650 | INFO     | cat /etc/os-release:
[2026-04-01 18:06:33] NAME="CentOS Linux"
[2026-04-01 18:06:33] VERSION="7 (Core)"
[2026-04-01 18:06:33] ID="centos"
[2026-04-01 18:06:33] ID_LIKE="rhel fedora"
[2026-04-01 18:06:33] VERSION_ID="7"
[2026-04-01 18:06:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 18:06:33] ANSI_COLOR="0;31"
[2026-04-01 18:06:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 18:06:33] HOME_URL="https://www.centos.org/"
[2026-04-01 18:06:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 18:06:33] 
[2026-04-01 18:06:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 18:06:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 18:06:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 18:06:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 18:06:33] 
[2026-04-01 18:06:33] 2026-04-01 16:00:46,651 | INFO     | **************************************
[2026-04-01 18:06:33] 2026-04-01 16:00:47,153 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/1
[2026-04-01 18:06:33] 2026-04-01 16:00:47,180 | INFO     | sufficient remaining disk space (252370223104 B)
[2026-04-01 18:06:33] 2026-04-01 16:00:47,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 18:06:33] 2026-04-01 16:00:47,180 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 18:06:33] 2026-04-01 16:00:47,180 | INFO     | update_server=False
[2026-04-01 18:06:33] 2026-04-01 16:00:47,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 18:06:33] 2026-04-01 16:00:47,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 18:06:33] 2026-04-01 16:00:47,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 18:06:33] 2026-04-01 16:00:47,281 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-01 18:06:33] 2026-04-01 16:00:47,282 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-01 18:06:33] 2026-04-01 16:00:47,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 18:06:33] 2026-04-01 16:00:47,282 | INFO     | will abort loop
[2026-04-01 18:06:33] 2026-04-01 16:00:47,458 | INFO     | all payload control threads have been joined
[2026-04-01 18:06:33] 2026-04-01 16:00:48,107 | INFO     | all data control threads have been joined
[2026-04-01 18:06:33] 2026-04-01 16:00:48,186 | INFO     | [job] retrieve thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:48,225 | INFO     | [job] validate thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:48,287 | INFO     | [job] job monitor thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:48,387 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:48,463 | INFO     | [payload] control thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:48,520 | INFO     | all job control threads have been joined
[2026-04-01 18:06:33] 2026-04-01 16:00:48,677 | INFO     | [payload] failed_post thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:48,778 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:48,794 | INFO     | [data] copytool_in thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:48,886 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:49,034 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:49,113 | INFO     | [data] control thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:49,186 | INFO     | [data] copytool_out thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:49,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 18:06:33] 2026-04-01 16:00:49,525 | INFO     | [job] control thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:49,770 | INFO     | [payload] validate_post thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:50,345 | INFO     | [job] queue monitor thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:00:51,233 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 18:06:33] 2026-04-01 16:01:17,522 | INFO     | PID=1786123 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-01 18:06:33] 2026-04-01 16:01:17,524 | INFO     | .. there are 21 such processes running
[2026-04-01 18:06:33] 2026-04-01 16:01:17,525 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 18:06:33] 2026-04-01 16:01:17,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 18:06:33] 2026-04-01 16:01:17,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 18:06:33] 2026-04-01 16:01:39,874 | INFO     | [monitor] cgroup control has ended
[2026-04-01 18:06:33] 2026-04-01 16:01:41,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22470781986624)>', '<ExcThread(monitor, started 22470540400384)>']
[2026-04-01 18:06:33] 2026-04-01 16:01:41,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 18:06:33] 2026-04-01 16:01:41,639 | INFO     | [monitor] control thread has ended
[2026-04-01 18:06:33] 2026-04-01 16:01:46,079 | INFO     | all workflow threads have been joined
[2026-04-01 18:06:33] 2026-04-01 16:01:46,079 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 18:06:33] 2026-04-01 16:01:46,079 | INFO     | traces error code: 0
[2026-04-01 18:06:33] 2026-04-01 16:01:46,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 18:06:33] 2026-04-01 16:01:46,240 [wrapper] ==== pilot stdout END ====
[2026-04-01 18:06:33] 2026-04-01 16:01:46,244 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 18:06:33] 2026-04-01 16:01:46,248 [wrapper] pilotpid: 1786123
[2026-04-01 18:06:33] 2026-04-01 16:01:46,251 [wrapper] Pilot exit status: 0
[2026-04-01 18:06:33] 2026-04-01 16:01:46,269 [wrapper] pandaids: 7071840728
[2026-04-01 18:06:33] 2026-04-01 16:01:46,475 [wrapper] cleanup supervisor_pilot 2759705 1786124
[2026-04-01 18:06:33] 2026-04-01 16:01:46,478 [wrapper] Test setup, not cleaning
[2026-04-01 18:06:33] 2026-04-01 16:01:46,481 [wrapper] apfmon messages muted
[2026-04-01 18:06:33] 2026-04-01 16:01:46,484 [wrapper] ==== wrapper stdout END ====
[2026-04-01 18:06:33] 2026-04-01 16:01:46,487 [wrapper] ==== wrapper stderr END ====
[2026-04-01 18:06:33]  *** Error codes and diagnostics ***
[2026-04-01 18:06:33]     "exeErrorCode": 0,
[2026-04-01 18:06:33]     "exeErrorDiag": "",
[2026-04-01 18:06:33]     "pilotErrorCode": 0,
[2026-04-01 18:06:33]     "pilotErrorDiag": "",
[2026-04-01 18:06:33]  *** Listing of results directory ***
[2026-04-01 18:06:33] total 487728
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc    585013 Mar 28 03:21 pilot3.tar.gz
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc      5118 Mar 28 03:38 queuedata.json
[2026-04-01 18:06:33] -rwx------. 1 boinc boinc     36322 Mar 28 03:38 runpilot2-wrapper.sh
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc       100 Apr  1 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 18:06:33] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 11:32 run_atlas
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc       105 Apr  1 11:32 job.xml
[2026-04-01 18:06:33] -rw-r--r--. 2 boinc boinc 244587353 Apr  1 11:32 EVNT.49131861._000026.pool.root.1
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc      6622 Apr  1 11:32 init_data.xml
[2026-04-01 18:06:33] -rw-r--r--. 2 boinc boinc     15845 Apr  1 11:32 start_atlas.sh
[2026-04-01 18:06:33] drwxrwx--x. 2 boinc boinc      4096 Apr  1 11:32 shared
[2026-04-01 18:06:33] -rw-r--r--. 2 boinc boinc    597556 Apr  1 11:32 input.tar.gz
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc         0 Apr  1 11:32 boinc_lockfile
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc      2605 Apr  1 11:32 pandaJob.out
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc   1004639 Apr  1 11:32 agis_schedconf.cvmfs.json
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc       443 Apr  1 11:33 workernode_map.json
[2026-04-01 18:06:33] drwx------. 5 boinc boinc      4096 Apr  1 11:33 pilot3
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc 243510803 Apr  1 17:59 HITS.49179615._001475.pool.root.1
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc       530 Apr  1 18:00 boinc_task_state.xml
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc      1028 Apr  1 18:00 memory_monitor_summary.json
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc   1511579 Apr  1 18:00 agis_ddmendpoints.agis.ALL.json
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc    525744 Apr  1 18:00 log.49179615._001475.job.log.tgz.1
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc      6346 Apr  1 18:00 heartbeat.json
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc        95 Apr  1 18:01 pilot_heartbeat.json
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc      5017 Apr  1 18:01 pilotlog.txt
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc   3171594 Apr  1 18:01 log.49179615._001475.job.log.1
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc       357 Apr  1 18:01 output.list
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc       620 Apr  1 18:01 runtime_log
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc   3717120 Apr  1 18:01 result.tar.gz
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc      9205 Apr  1 18:01 runtime_log.err
[2026-04-01 18:06:33] -rw-------. 1 boinc boinc       666 Apr  1 18:01 OfuNDmekYQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmprIKDmKP1zpm.diag
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc        28 Apr  1 18:06 wrapper_checkpoint.txt
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc      8192 Apr  1 18:06 boinc_mmap_file
[2026-04-01 18:06:33] -rw-r--r--. 1 boinc boinc     21162 Apr  1 18:06 stderr.txt
[2026-04-01 18:06:33] HITS file was successfully produced:
[2026-04-01 18:06:34] -rw-------. 1 boinc boinc 243510803 Apr  1 17:59 shared/HITS.pool.root.1
[2026-04-01 18:06:34]  *** Contents of shared directory: ***
[2026-04-01 18:06:34] total 480900
[2026-04-01 18:06:34] -rw-r--r--. 2 boinc boinc 244587353 Apr  1 11:32 ATLAS.root_0
[2026-04-01 18:06:34] -rw-r--r--. 2 boinc boinc     15845 Apr  1 11:32 start_atlas.sh
[2026-04-01 18:06:34] -rw-r--r--. 2 boinc boinc    597556 Apr  1 11:32 input.tar.gz
[2026-04-01 18:06:34] -rw-------. 1 boinc boinc 243510803 Apr  1 17:59 HITS.pool.root.1
[2026-04-01 18:06:34] -rw-------. 1 boinc boinc   3717120 Apr  1 18:01 result.tar.gz
18:06:35 (1780021): run_atlas exited; CPU time 91039.756593
18:06:35 (1780021): called boinc_finish(0)

</stderr_txt>
]]>

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