Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:33 (2808705): wrapper (7.7.26015): starting
19:20:33 (2808705): wrapper: running run_atlas (--nthreads 4)
[2026-04-01 19:20:33] Arguments: --nthreads 4
[2026-04-01 19:20:33] Threads: 4
[2026-04-01 19:20:33] Checking for CVMFS
[2026-04-01 19:20:33] No cvmfs_config command found, will try listing directly
[2026-04-01 19:20:33] CVMFS is ok
[2026-04-01 19:20:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 19:20:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 19:20:33] Further information can be found at the LHC@home message board.
[2026-04-01 19:20:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 19:20:33] Checking for apptainer binary...
[2026-04-01 19:20:33] which: no apptainer in ((null))
[2026-04-01 19:20:33] apptainer is not installed, using version from CVMFS
[2026-04-01 19:20:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 19:20:33] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-04-01 19:20:33] apptainer works
[2026-04-01 19:20:33] Set ATHENA_PROC_NUMBER=4
[2026-04-01 19:20:33] Set ATHENA_CORE_NUMBER=4
[2026-04-01 19:20:33] Starting ATLAS job with PandaID=7071839740
[2026-04-01 19:20:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:28:50 (2867996): wrapper (7.7.26015): starting
19:28:50 (2867996): wrapper: running run_atlas (--nthreads 4)
[2026-04-01 19:28:50] Arguments: --nthreads 4
[2026-04-01 19:28:50] Threads: 4
[2026-04-01 19:28:50] This job has been restarted, cleaning up previous attempt
[2026-04-01 19:28:50] Checking for CVMFS
[2026-04-01 19:28:50] No cvmfs_config command found, will try listing directly
[2026-04-01 19:28:50] CVMFS is ok
[2026-04-01 19:28:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 19:28:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 19:28:50] Further information can be found at the LHC@home message board.
[2026-04-01 19:28:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 19:28:50] Checking for apptainer binary...
[2026-04-01 19:28:50] which: no apptainer in ((null))
[2026-04-01 19:28:50] apptainer is not installed, using version from CVMFS
[2026-04-01 19:28:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 19:28:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-04-01 19:28:50] apptainer works
[2026-04-01 19:28:50] Set ATHENA_PROC_NUMBER=4
[2026-04-01 19:28:50] Set ATHENA_CORE_NUMBER=4
[2026-04-01 19:28:50] Starting ATLAS job with PandaID=7071839740
[2026-04-01 19:28:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 01:38:54]  *** The last 200 lines of the pilot log: ***
[2026-04-02 01:38:54] 2026-04-01 23:38:21,951 | INFO     | reading metadata from: /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7071839740/jobReport.json
[2026-04-02 01:38:54] 2026-04-01 23:38:21,953 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot116/slots/0/workernode_map.json
[2026-04-02 01:38:54] 2026-04-01 23:38:21,954 | INFO     | this job has now completed (state=finished)
[2026-04-02 01:38:54] 2026-04-01 23:38:21,957 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-02 01:38:54] 2026-04-01 23:38:21,957 | INFO     | log transfer has been attempted: DONE
[2026-04-02 01:38:54] 2026-04-01 23:38:21,957 | INFO     | job 7071839740 has finished - writing final server update
[2026-04-02 01:38:54] 2026-04-01 23:38:21,957 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2840975/.job.ad'
[2026-04-02 01:38:54] 2026-04-01 23:38:21,957 | INFO     | total number of processed events: 400 (read)
[2026-04-02 01:38:54] 2026-04-01 23:38:21,959 | INFO     | monitor loop #1495: job 0:7071839740 is in state 'finished'
[2026-04-02 01:38:54] 2026-04-01 23:38:21,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-02 01:38:54] 2026-04-01 23:38:21,982 | INFO     | using path: /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7071839740/memory_monitor_summary.json (trf name=prmon)
[2026-04-02 01:38:54] 2026-04-01 23:38:21,983 | INFO     | extracted standard info from prmon json
[2026-04-02 01:38:54] 2026-04-01 23:38:21,983 | INFO     | extracted standard memory fields from prmon json
[2026-04-02 01:38:54] 2026-04-01 23:38:21,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-02 01:38:54] 2026-04-01 23:38:21,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-02 01:38:54] 2026-04-01 23:38:21,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-02 01:38:54] 2026-04-01 23:38:21,989 | INFO     | fitting pss+swap vs Time
[2026-04-02 01:38:54] 2026-04-01 23:38:21,990 | INFO     | sum of square deviations: 14831839022.0
[2026-04-02 01:38:54] 2026-04-01 23:38:21,993 | INFO     | sum of deviations: 47279036309.0
[2026-04-02 01:38:54] 2026-04-01 23:38:21,994 | INFO     | mean x: 1775075611.0
[2026-04-02 01:38:54] 2026-04-01 23:38:21,994 | INFO     | mean y: 2336012.0716253445
[2026-04-02 01:38:54] 2026-04-01 23:38:21,994 | INFO     | intersect: -5656022613.531408
[2026-04-02 01:38:54] 2026-04-01 23:38:21,994 | INFO     | chi2: 1.0884281744982904
[2026-04-02 01:38:54] 2026-04-01 23:38:21,995 | INFO     | sum of square deviations: 14227353269.5
[2026-04-02 01:38:54] 2026-04-01 23:38:21,998 | INFO     | sum of deviations: 46394185894.5
[2026-04-02 01:38:54] 2026-04-01 23:38:21,998 | INFO     | mean x: 1775075458.5
[2026-04-02 01:38:54] 2026-04-01 23:38:21,998 | INFO     | mean y: 2335788.9525139667
[2026-04-02 01:38:54] 2026-04-01 23:38:21,999 | INFO     | intersect: -5786033926.65433
[2026-04-02 01:38:54] 2026-04-01 23:38:21,999 | INFO     | chi2: 1.0885719701320802
[2026-04-02 01:38:54] 2026-04-01 23:38:21,999 | INFO     | current chi2=1.0885719701320802 (change=-0.013211311243025058 %)
[2026-04-02 01:38:54] 2026-04-01 23:38:21,999 | INFO     | right removable region: 357
[2026-04-02 01:38:54] 2026-04-01 23:38:22,000 | INFO     | sum of square deviations: 14227353269.5
[2026-04-02 01:38:54] 2026-04-01 23:38:22,003 | INFO     | sum of deviations: 9283187186.499998
[2026-04-02 01:38:54] 2026-04-01 23:38:22,003 | INFO     | mean x: 1775075763.5
[2026-04-02 01:38:54] 2026-04-01 23:38:22,003 | INFO     | mean y: 2345523.879888268
[2026-04-02 01:38:54] 2026-04-01 23:38:22,004 | INFO     | intersect: -1155871346.8655312
[2026-04-02 01:38:54] 2026-04-01 23:38:22,004 | INFO     | chi2: 0.001167203388505162
[2026-04-02 01:38:54] 2026-04-01 23:38:22,004 | INFO     | current chi2=0.001167203388505162 (change=99.89276247933925 %)
[2026-04-02 01:38:54] 2026-04-01 23:38:22,005 | INFO     | sum of square deviations: 13639518992.0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,008 | INFO     | sum of deviations: 8863475680.0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,008 | INFO     | mean x: 1775075916.0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,008 | INFO     | mean y: 2345632.0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,008 | INFO     | intersect: -1151165882.6544256
[2026-04-02 01:38:54] 2026-04-01 23:38:22,009 | INFO     | chi2: 0.001072541846320651
[2026-04-02 01:38:54] 2026-04-01 23:38:22,009 | INFO     | current chi2=0.001072541846320651 (change=8.110115436328893 %)
[2026-04-02 01:38:54] 2026-04-01 23:38:22,009 | INFO     | left removable region: 20
[2026-04-02 01:38:54] 2026-04-01 23:38:22,009 | INFO     | sum of square deviations: 11867638328.0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,012 | INFO     | sum of deviations: 8449496434.999999
[2026-04-02 01:38:54] 2026-04-01 23:38:22,013 | INFO     | mean x: 1775076038.0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,013 | INFO     | mean y: 2345530.1068249256
[2026-04-02 01:38:54] 2026-04-01 23:38:22,013 | INFO     | intersect: -1261469412.7152953
[2026-04-02 01:38:54] 2026-04-01 23:38:22,013 | INFO     | chi2: 0.0008696962510197962
[2026-04-02 01:38:54] 2026-04-01 23:38:22,013 | INFO     | current memory leak: 0.71 B/s (using 337 data points, chi2=0.00)
[2026-04-02 01:38:54] 2026-04-01 23:38:22,014 | INFO     | could have reported an average CPU frequency of 2744 MHz (16 samples)
[2026-04-02 01:38:54] 2026-04-01 23:38:22,014 | INFO     | ..............................
[2026-04-02 01:38:54] 2026-04-01 23:38:22,014 | INFO     | . Timing measurements:
[2026-04-02 01:38:54] 2026-04-01 23:38:22,014 | INFO     | . get job = 0 s
[2026-04-02 01:38:54] 2026-04-01 23:38:22,014 | INFO     | . initial setup = 1 s
[2026-04-02 01:38:54] 2026-04-01 23:38:22,014 | INFO     | . payload setup = 11 s
[2026-04-02 01:38:54] 2026-04-01 23:38:22,014 | INFO     | . stage-in = 0 s
[2026-04-02 01:38:54] 2026-04-01 23:38:22,014 | INFO     | . payload execution = 22130 s
[2026-04-02 01:38:54] 2026-04-01 23:38:22,015 | INFO     | . stage-out = 1 s
[2026-04-02 01:38:54] 2026-04-01 23:38:22,015 | INFO     | . log creation = 0 s
[2026-04-02 01:38:54] 2026-04-01 23:38:22,015 | INFO     | ..............................
[2026-04-02 01:38:54] 2026-04-01 23:38:22,103 | INFO     | 
[2026-04-02 01:38:54] 2026-04-01 23:38:22,104 | INFO     | job summary report
[2026-04-02 01:38:54] 2026-04-01 23:38:22,104 | INFO     | --------------------------------------------------
[2026-04-02 01:38:54] 2026-04-01 23:38:22,104 | INFO     | PanDA job id: 7071839740
[2026-04-02 01:38:54] 2026-04-01 23:38:22,104 | INFO     | task id: 49179615
[2026-04-02 01:38:54] 2026-04-01 23:38:22,104 | INFO     | errors: (none)
[2026-04-02 01:38:54] 2026-04-01 23:38:22,104 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-02 01:38:54] 2026-04-01 23:38:22,104 | INFO     | pilot state: finished 
[2026-04-02 01:38:54] 2026-04-01 23:38:22,104 | INFO     | transexitcode: 0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,104 | INFO     | exeerrorcode: 0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | exeerrordiag: 
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | exitcode: 0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | exitmsg: OK
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | cpuconsumptiontime: 85643 s
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | nevents: 400
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | neventsw: 0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | pid: 2901649
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | pgrp: 2901649
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | corecount: 4
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | event service: False
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | sizes: {0: 2280251, 11: 2280251, 22146: 2315528, 22147: 2324550, 22149: 2324800}
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | --------------------------------------------------
[2026-04-02 01:38:54] 2026-04-01 23:38:22,105 | INFO     | 
[2026-04-02 01:38:54] 2026-04-01 23:38:22,106 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/0
[2026-04-02 01:38:54] 2026-04-01 23:38:22,136 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,136 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,136 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,136 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,138 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-02 01:38:54] 2026-04-01 23:38:22,138 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,138 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-02 01:38:54] 2026-04-01 23:38:22,138 | INFO     | job 7071839740 has completed (purged errors)
[2026-04-02 01:38:54] 2026-04-01 23:38:22,138 | INFO     | overall cleanup function is called
[2026-04-02 01:38:54] 2026-04-01 23:38:23,147 | INFO     | --- collectZombieJob: --- 10, [2901649]
[2026-04-02 01:38:54] 2026-04-01 23:38:23,147 | INFO     | zombie collector waiting for pid 2901649
[2026-04-02 01:38:54] 2026-04-01 23:38:23,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-02 01:38:54] 2026-04-01 23:38:23,147 | INFO     | collected zombie processes
[2026-04-02 01:38:54] 2026-04-01 23:38:23,147 | INFO     | will attempt to kill all subprocesses of pid=2901649
[2026-04-02 01:38:54] 2026-04-01 23:38:23,998 | INFO     | process IDs to be killed: [2901649] (in reverse order)
[2026-04-02 01:38:54] 2026-04-01 23:38:24,354 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 01:38:54] 2026-04-01 23:38:24,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 01:38:54] 2026-04-01 23:38:24,388 | INFO     | did not find any defunct processes belonging to 2901649
[2026-04-02 01:38:54] 2026-04-01 23:38:24,421 | INFO     | did not find any defunct processes belonging to 2901649
[2026-04-02 01:38:54] 2026-04-01 23:38:24,421 | INFO     | ready for new job
[2026-04-02 01:38:54] 2026-04-01 23:38:24,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-02 01:38:54] 2026-04-01 23:38:24,425 | INFO     | **************************************
[2026-04-02 01:38:54] 2026-04-01 23:38:24,425 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-02 01:38:54] 2026-04-01 23:38:24,425 | INFO     | **************************************
[2026-04-02 01:38:54] 2026-04-01 23:38:24,425 | INFO     | 
[2026-04-02 01:38:54] 2026-04-01 23:38:24,433 | INFO     | architecture information:
[2026-04-02 01:38:54] 2026-04-01 23:38:24,434 | INFO     | executing command: cat /etc/os-release
[2026-04-02 01:38:54] 2026-04-01 23:38:24,455 | INFO     | cat /etc/os-release:
[2026-04-02 01:38:54] NAME="CentOS Linux"
[2026-04-02 01:38:54] VERSION="7 (Core)"
[2026-04-02 01:38:54] ID="centos"
[2026-04-02 01:38:54] ID_LIKE="rhel fedora"
[2026-04-02 01:38:54] VERSION_ID="7"
[2026-04-02 01:38:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 01:38:54] ANSI_COLOR="0;31"
[2026-04-02 01:38:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 01:38:54] HOME_URL="https://www.centos.org/"
[2026-04-02 01:38:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 01:38:54] 
[2026-04-02 01:38:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 01:38:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 01:38:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 01:38:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 01:38:54] 
[2026-04-02 01:38:54] 2026-04-01 23:38:24,455 | INFO     | **************************************
[2026-04-02 01:38:54] 2026-04-01 23:38:24,958 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/0
[2026-04-02 01:38:54] 2026-04-01 23:38:24,981 | INFO     | sufficient remaining disk space (251222032384 B)
[2026-04-02 01:38:54] 2026-04-01 23:38:24,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 01:38:54] 2026-04-01 23:38:24,982 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 01:38:54] 2026-04-01 23:38:24,982 | INFO     | update_server=False
[2026-04-02 01:38:54] 2026-04-01 23:38:24,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-02 01:38:54] 2026-04-01 23:38:25,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 01:38:54] 2026-04-01 23:38:25,470 | INFO     | aborting loop
[2026-04-02 01:38:54] 2026-04-01 23:38:25,688 | INFO     | all job control threads have been joined
[2026-04-02 01:38:54] 2026-04-01 23:38:25,818 | INFO     | all data control threads have been joined
[2026-04-02 01:38:54] 2026-04-01 23:38:25,823 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 01:38:54] 2026-04-01 23:38:25,987 | INFO     | [job] retrieve thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:26,079 | INFO     | [data] copytool_in thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:26,212 | INFO     | [payload] validate_post thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:26,277 | INFO     | [job] validate thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:26,319 | INFO     | all payload control threads have been joined
[2026-04-02 01:38:54] 2026-04-01 23:38:26,429 | INFO     | [payload] failed_post thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:26,475 | INFO     | [job] job monitor thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:26,577 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:26,694 | INFO     | [job] control thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:26,819 | INFO     | [data] control thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:26,994 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:27,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 01:38:54] 2026-04-01 23:38:27,205 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:27,324 | INFO     | [payload] control thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:27,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 01:38:54] 2026-04-01 23:38:27,828 | INFO     | [data] copytool_out thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:28,120 | INFO     | [job] queue monitor thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:31,609 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:35,436 | INFO     | job.realtimelogging is not enabled
[2026-04-02 01:38:54] 2026-04-01 23:38:36,441 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 01:38:54] 2026-04-01 23:38:38,131 | INFO     | [monitor] cgroup control has ended
[2026-04-02 01:38:54] 2026-04-01 23:38:39,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23050403215168)>', '<ExcThread(monitor, started 23050170152704)>']
[2026-04-02 01:38:54] 2026-04-01 23:38:44,500 | INFO     | all workflow threads have been joined
[2026-04-02 01:38:54] 2026-04-01 23:38:44,500 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 01:38:54] 2026-04-01 23:38:44,500 | INFO     | traces error code: 0
[2026-04-02 01:38:54] 2026-04-01 23:38:44,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 01:38:54] 2026-04-01 23:38:54,505 | INFO     | PID=2883699 has CPU usage=16.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-02 01:38:54] 2026-04-01 23:38:54,505 | INFO     | .. there are 21 such processes running
[2026-04-02 01:38:54] 2026-04-01 23:38:54,506 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 01:38:54] 2026-04-01 23:38:54,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 01:38:54] 2026-04-01 23:38:54,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 01:38:54] 2026-04-01 23:38:54,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 01:38:54] 2026-04-01 23:38:54,507 | INFO     | [monitor] control thread has ended
[2026-04-02 01:38:54] 2026-04-01 23:38:54,629 [wrapper] ==== pilot stdout END ====
[2026-04-02 01:38:54] 2026-04-01 23:38:54,631 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 01:38:54] 2026-04-01 23:38:54,634 [wrapper] pilotpid: 2883699
[2026-04-02 01:38:54] 2026-04-01 23:38:54,640 [wrapper] Pilot exit status: 0
[2026-04-02 01:38:54] 2026-04-01 23:38:54,655 [wrapper] pandaids: 7071839740 7071839740
[2026-04-02 01:38:54] 2026-04-01 23:38:54,869 [wrapper] cleanup supervisor_pilot 3533577 2883700
[2026-04-02 01:38:54] 2026-04-01 23:38:54,874 [wrapper] Test setup, not cleaning
[2026-04-02 01:38:54] 2026-04-01 23:38:54,878 [wrapper] apfmon messages muted
[2026-04-02 01:38:54] 2026-04-01 23:38:54,882 [wrapper] ==== wrapper stdout END ====
[2026-04-02 01:38:54] 2026-04-01 23:38:54,886 [wrapper] ==== wrapper stderr END ====
[2026-04-02 01:38:54]  *** Error codes and diagnostics ***
[2026-04-02 01:38:54]     "exeErrorCode": 0,
[2026-04-02 01:38:54]     "exeErrorDiag": "",
[2026-04-02 01:38:54]     "pilotErrorCode": 0,
[2026-04-02 01:38:54]     "pilotErrorDiag": "",
[2026-04-02 01:38:54]  *** Listing of results directory ***
[2026-04-02 01:38:55] total 719216
[2026-04-02 01:38:55] drwx------. 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc    585013 Mar 28 03:21 pilot3.tar.gz
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc      5118 Mar 28 03:38 queuedata.json
[2026-04-02 01:38:55] -rwx------. 1 boinc boinc     36322 Mar 28 03:38 runpilot2-wrapper.sh
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc       100 Apr  1 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 01:38:55] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 19:20 run_atlas
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc       105 Apr  1 19:20 job.xml
[2026-04-02 01:38:55] -rw-r--r--. 3 boinc boinc 245327476 Apr  1 19:20 EVNT.49131861._000019.pool.root.1
[2026-04-02 01:38:55] -rw-r--r--. 3 boinc boinc 245327476 Apr  1 19:20 ATLAS.root_0
[2026-04-02 01:38:55] -rw-r--r--. 2 boinc boinc     15845 Apr  1 19:20 start_atlas.sh
[2026-04-02 01:38:55] drwxrwx--x. 2 boinc boinc      4096 Apr  1 19:20 shared
[2026-04-02 01:38:55] -rw-r--r--. 2 boinc boinc    597553 Apr  1 19:20 input.tar.gz
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc         0 Apr  1 19:20 boinc_lockfile
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc      2605 Apr  1 19:28 pandaJob.out
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc   1005501 Apr  1 19:29 agis_schedconf.cvmfs.json
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc       443 Apr  1 19:29 workernode_map.json
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc      6630 Apr  1 20:21 init_data.xml
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc 234829779 Apr  2 01:37 HITS.49179615._001395.pool.root.1
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc       530 Apr  2 01:37 boinc_task_state.xml
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc      1041 Apr  2 01:38 memory_monitor_summary.json
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc   1511579 Apr  2 01:38 agis_ddmendpoints.agis.ALL.json
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc    497207 Apr  2 01:38 log.49179615._001395.job.log.tgz.1
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc      6349 Apr  2 01:38 heartbeat.json
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc        28 Apr  2 01:38 wrapper_checkpoint.txt
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc      8192 Apr  2 01:38 boinc_mmap_file
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc        96 Apr  2 01:38 pilot_heartbeat.json
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc       824 Apr  2 01:38 pilotlog.txt
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc   3028993 Apr  2 01:38 log.49179615._001395.job.log.1
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc       357 Apr  2 01:38 output.list
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc       620 Apr  2 01:38 runtime_log
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc   3543040 Apr  2 01:38 result.tar.gz
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc      9299 Apr  2 01:38 runtime_log.err
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc       792 Apr  2 01:38 WSnMDmekYQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmArIKDmkZ5k7m.diag
[2026-04-02 01:38:55] -rw-r--r--. 1 boinc boinc     23040 Apr  2 01:38 stderr.txt
[2026-04-02 01:38:55] HITS file was successfully produced:
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc 234829779 Apr  2 01:37 shared/HITS.pool.root.1
[2026-04-02 01:38:55]  *** Contents of shared directory: ***
[2026-04-02 01:38:55] total 472976
[2026-04-02 01:38:55] -rw-r--r--. 3 boinc boinc 245327476 Apr  1 19:20 ATLAS.root_0
[2026-04-02 01:38:55] -rw-r--r--. 2 boinc boinc     15845 Apr  1 19:20 start_atlas.sh
[2026-04-02 01:38:55] -rw-r--r--. 2 boinc boinc    597553 Apr  1 19:20 input.tar.gz
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc 234829779 Apr  2 01:37 HITS.pool.root.1
[2026-04-02 01:38:55] -rw-------. 1 boinc boinc   3543040 Apr  2 01:38 result.tar.gz
01:38:56 (2867996): run_atlas exited; CPU time 87163.842031
01:38:56 (2867996): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN