Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:40:36 (1670615): wrapper (7.7.26015): starting
00:40:36 (1670615): wrapper: running run_atlas (--nthreads 4)
[2026-03-31 00:40:36] Arguments: --nthreads 4
[2026-03-31 00:40:36] Threads: 4
[2026-03-31 00:40:36] Checking for CVMFS
[2026-03-31 00:40:36] No cvmfs_config command found, will try listing directly
[2026-03-31 00:40:36] CVMFS is ok
[2026-03-31 00:40:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 00:40:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 00:40:36] Further information can be found at the LHC@home message board.
[2026-03-31 00:40:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 00:40:36] Checking for apptainer binary...
[2026-03-31 00:40:36] which: no apptainer in ((null))
[2026-03-31 00:40:36] apptainer is not installed, using version from CVMFS
[2026-03-31 00:40:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 00:40:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-03-31 00:40:36] apptainer works
[2026-03-31 00:40:36] Set ATHENA_PROC_NUMBER=4
[2026-03-31 00:40:36] Set ATHENA_CORE_NUMBER=4
[2026-03-31 00:40:36] Starting ATLAS job with PandaID=7071839389
[2026-03-31 00:40:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 06:12:39]  *** The last 200 lines of the pilot log: ***
[2026-03-31 06:12:39] 2026-03-31 04:11:51,027 | INFO     | preparing for final server update for job 7071839389 in state='finished'
[2026-03-31 06:12:39] 2026-03-31 04:11:51,027 | INFO     | reading metadata from: /var/lib/boinc/var/slot112/slots/0/PanDA_Pilot-7071839389/jobReport.json
[2026-03-31 06:12:39] 2026-03-31 04:11:51,030 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot112/slots/0/workernode_map.json
[2026-03-31 06:12:39] 2026-03-31 04:11:51,031 | INFO     | this job has now completed (state=finished)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,031 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,031 | INFO     | log transfer has been attempted: DONE
[2026-03-31 06:12:39] 2026-03-31 04:11:51,031 | INFO     | job 7071839389 has finished - writing final server update
[2026-03-31 06:12:39] 2026-03-31 04:11:51,032 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1431745/.job.ad'
[2026-03-31 06:12:39] 2026-03-31 04:11:51,032 | INFO     | total number of processed events: 400 (read)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,056 | INFO     | using path: /var/lib/boinc/var/slot112/slots/0/PanDA_Pilot-7071839389/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,056 | INFO     | extracted standard info from prmon json
[2026-03-31 06:12:39] 2026-03-31 04:11:51,056 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 06:12:39] 2026-03-31 04:11:51,056 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-31 06:12:39] 2026-03-31 04:11:51,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 06:12:39] 2026-03-31 04:11:51,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 06:12:39] 2026-03-31 04:11:51,063 | INFO     | fitting pss+swap vs Time
[2026-03-31 06:12:39] 2026-03-31 04:11:51,064 | INFO     | sum of square deviations: 10644478650.0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,066 | INFO     | sum of deviations: 29266384312.000004
[2026-03-31 06:12:39] 2026-03-31 04:11:51,067 | INFO     | mean x: 1774920375.0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,067 | INFO     | mean y: 2326916.9876923077
[2026-03-31 06:12:39] 2026-03-31 04:11:51,067 | INFO     | intersect: -4877714983.227794
[2026-03-31 06:12:39] 2026-03-31 04:11:51,067 | INFO     | chi2: 1.297429770327046
[2026-03-31 06:12:39] 2026-03-31 04:11:51,068 | INFO     | sum of square deviations: 10160711440.0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,070 | INFO     | sum of deviations: 28639280400.000008
[2026-03-31 06:12:39] 2026-03-31 04:11:51,070 | INFO     | mean x: 1774920222.5
[2026-03-31 06:12:39] 2026-03-31 04:11:51,071 | INFO     | mean y: 2326719.2875
[2026-03-31 06:12:39] 2026-03-31 04:11:51,071 | INFO     | intersect: -5000515674.178592
[2026-03-31 06:12:39] 2026-03-31 04:11:51,071 | INFO     | chi2: 1.2977287023887976
[2026-03-31 06:12:39] 2026-03-31 04:11:51,071 | INFO     | current chi2=1.2977287023887976 (change=-0.023040327005608506 %)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,071 | INFO     | right removable region: 319
[2026-03-31 06:12:39] 2026-03-31 04:11:51,072 | INFO     | sum of square deviations: 10160711440.0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,074 | INFO     | sum of deviations: -9839094277.5
[2026-03-31 06:12:39] 2026-03-31 04:11:51,075 | INFO     | mean x: 1774920527.5
[2026-03-31 06:12:39] 2026-03-31 04:11:51,075 | INFO     | mean y: 2339138.828125
[2026-03-31 06:12:39] 2026-03-31 04:11:51,075 | INFO     | intersect: 1721078078.3469636
[2026-03-31 06:12:39] 2026-03-31 04:11:51,075 | INFO     | chi2: 0.024731037680103728
[2026-03-31 06:12:39] 2026-03-31 04:11:51,078 | INFO     | current chi2=0.024731037680103728 (change=98.0938438252523 %)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,078 | INFO     | sum of square deviations: 9691828230.0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,081 | INFO     | sum of deviations: -8396626454.0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,081 | INFO     | mean x: 1774920680.0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,081 | INFO     | mean y: 2338668.5841269842
[2026-03-31 06:12:39] 2026-03-31 04:11:51,081 | INFO     | intersect: 1540061540.034529
[2026-03-31 06:12:39] 2026-03-31 04:11:51,081 | INFO     | chi2: 0.02429341258344503
[2026-03-31 06:12:39] 2026-03-31 04:11:51,082 | INFO     | current chi2=0.02429341258344503 (change=1.7695379478992543 %)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,082 | INFO     | left removable region: 20
[2026-03-31 06:12:39] 2026-03-31 04:11:51,082 | INFO     | sum of square deviations: 8288713550.0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,084 | INFO     | sum of deviations: -2910895782.999999
[2026-03-31 06:12:39] 2026-03-31 04:11:51,084 | INFO     | mean x: 1774920802.0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,085 | INFO     | mean y: 2336680.280936455
[2026-03-31 06:12:39] 2026-03-31 04:11:51,085 | INFO     | intersect: 625667363.2070917
[2026-03-31 06:12:39] 2026-03-31 04:11:51,085 | INFO     | chi2: 0.018820193471849038
[2026-03-31 06:12:39] 2026-03-31 04:11:51,085 | INFO     | current memory leak: -0.35 B/s (using 299 data points, chi2=0.02)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,086 | INFO     | could have reported an average CPU frequency of 2719 MHz (14 samples)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,086 | INFO     | ..............................
[2026-03-31 06:12:39] 2026-03-31 04:11:51,086 | INFO     | . Timing measurements:
[2026-03-31 06:12:39] 2026-03-31 04:11:51,086 | INFO     | . get job = 0 s
[2026-03-31 06:12:39] 2026-03-31 04:11:51,086 | INFO     | . initial setup = 8 s
[2026-03-31 06:12:39] 2026-03-31 04:11:51,086 | INFO     | . payload setup = 14 s
[2026-03-31 06:12:39] 2026-03-31 04:11:51,087 | INFO     | . stage-in = 0 s
[2026-03-31 06:12:39] 2026-03-31 04:11:51,087 | INFO     | . payload execution = 19818 s
[2026-03-31 06:12:39] 2026-03-31 04:11:51,087 | INFO     | . stage-out = 1 s
[2026-03-31 06:12:39] 2026-03-31 04:11:51,087 | INFO     | . log creation = 0 s
[2026-03-31 06:12:39] 2026-03-31 04:11:51,087 | INFO     | ..............................
[2026-03-31 06:12:39] 2026-03-31 04:11:51,178 | INFO     | 
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | job summary report
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | --------------------------------------------------
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | PanDA job id: 7071839389
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | task id: 49179534
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | errors: (none)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | pilot state: finished 
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | transexitcode: 0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | exeerrorcode: 0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | exeerrordiag: 
[2026-03-31 06:12:39] 2026-03-31 04:11:51,179 | INFO     | exitcode: 0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | exitmsg: OK
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | cpuconsumptiontime: 76257 s
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | nevents: 400
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | neventsw: 0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | pid: 1680389
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | pgrp: 1680389
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | corecount: 4
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | event service: False
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | sizes: {0: 2279829, 1: 2280290, 12: 2280290, 19836: 2314259, 19837: 2323281, 19839: 2323659}
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | --------------------------------------------------
[2026-03-31 06:12:39] 2026-03-31 04:11:51,180 | INFO     | 
[2026-03-31 06:12:39] 2026-03-31 04:11:51,181 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/0
[2026-03-31 06:12:39] 2026-03-31 04:11:51,211 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | job 7071839389 has completed (purged errors)
[2026-03-31 06:12:39] 2026-03-31 04:11:51,213 | INFO     | overall cleanup function is called
[2026-03-31 06:12:39] 2026-03-31 04:11:52,218 | INFO     | --- collectZombieJob: --- 10, [1680389]
[2026-03-31 06:12:39] 2026-03-31 04:11:52,218 | INFO     | zombie collector waiting for pid 1680389
[2026-03-31 06:12:39] 2026-03-31 04:11:52,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 06:12:39] 2026-03-31 04:11:52,219 | INFO     | collected zombie processes
[2026-03-31 06:12:39] 2026-03-31 04:11:52,219 | INFO     | will attempt to kill all subprocesses of pid=1680389
[2026-03-31 06:12:39] 2026-03-31 04:11:53,023 | INFO     | process IDs to be killed: [1680389] (in reverse order)
[2026-03-31 06:12:39] 2026-03-31 04:11:53,344 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 06:12:39] 2026-03-31 04:11:53,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 06:12:39] 2026-03-31 04:11:53,379 | INFO     | did not find any defunct processes belonging to 1680389
[2026-03-31 06:12:39] 2026-03-31 04:11:53,417 | INFO     | did not find any defunct processes belonging to 1680389
[2026-03-31 06:12:39] 2026-03-31 04:11:53,418 | INFO     | ready for new job
[2026-03-31 06:12:39] 2026-03-31 04:11:53,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-31 06:12:39] 2026-03-31 04:11:53,421 | INFO     | **************************************
[2026-03-31 06:12:39] 2026-03-31 04:11:53,421 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-31 06:12:39] 2026-03-31 04:11:53,422 | INFO     | **************************************
[2026-03-31 06:12:39] 2026-03-31 04:11:53,422 | INFO     | 
[2026-03-31 06:12:39] 2026-03-31 04:11:53,431 | INFO     | architecture information:
[2026-03-31 06:12:39] 2026-03-31 04:11:53,431 | INFO     | executing command: cat /etc/os-release
[2026-03-31 06:12:39] 2026-03-31 04:11:53,453 | INFO     | cat /etc/os-release:
[2026-03-31 06:12:39] NAME="CentOS Linux"
[2026-03-31 06:12:39] VERSION="7 (Core)"
[2026-03-31 06:12:39] ID="centos"
[2026-03-31 06:12:39] ID_LIKE="rhel fedora"
[2026-03-31 06:12:39] VERSION_ID="7"
[2026-03-31 06:12:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 06:12:39] ANSI_COLOR="0;31"
[2026-03-31 06:12:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 06:12:39] HOME_URL="https://www.centos.org/"
[2026-03-31 06:12:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 06:12:39] 
[2026-03-31 06:12:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 06:12:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 06:12:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 06:12:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 06:12:39] 
[2026-03-31 06:12:39] 2026-03-31 04:11:53,454 | INFO     | **************************************
[2026-03-31 06:12:39] 2026-03-31 04:11:53,956 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/0
[2026-03-31 06:12:39] 2026-03-31 04:11:53,977 | INFO     | sufficient remaining disk space (219404042240 B)
[2026-03-31 06:12:39] 2026-03-31 04:11:53,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 06:12:39] 2026-03-31 04:11:53,978 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 06:12:39] 2026-03-31 04:11:53,978 | INFO     | update_server=False
[2026-03-31 06:12:39] 2026-03-31 04:11:53,978 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-31 06:12:39] 2026-03-31 04:11:54,170 | INFO     | all job control threads have been joined
[2026-03-31 06:12:39] 2026-03-31 04:11:54,277 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 06:12:39] 2026-03-31 04:11:54,277 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 06:12:39] 2026-03-31 04:11:54,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 06:12:39] 2026-03-31 04:11:54,277 | INFO     | will abort loop
[2026-03-31 06:12:39] 2026-03-31 04:11:54,509 | INFO     | all payload control threads have been joined
[2026-03-31 06:12:39] 2026-03-31 04:11:54,542 | INFO     | all data control threads have been joined
[2026-03-31 06:12:39] 2026-03-31 04:11:54,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 06:12:39] 2026-03-31 04:11:54,983 | INFO     | [job] validate thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:54,984 | INFO     | [job] retrieve thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,082 | INFO     | [payload] failed_post thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,175 | INFO     | [job] control thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,180 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,282 | INFO     | [job] job monitor thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,360 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,443 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,514 | INFO     | [payload] control thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,542 | INFO     | [data] copytool_in thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,547 | INFO     | [data] control thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:55,679 | INFO     | [payload] validate_post thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:56,096 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:56,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 06:12:39] 2026-03-31 04:11:56,984 | INFO     | [data] copytool_out thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:11:57,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 06:12:39] 2026-03-31 04:11:57,193 | INFO     | [job] queue monitor thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:12:01,037 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 06:12:39] 2026-03-31 04:12:23,316 | INFO     | PID=1675034 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-31 06:12:39] 2026-03-31 04:12:23,317 | INFO     | .. there are 23 such processes running
[2026-03-31 06:12:39] 2026-03-31 04:12:23,318 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 06:12:39] 2026-03-31 04:12:23,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 06:12:39] 2026-03-31 04:12:23,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 06:12:39] 2026-03-31 04:12:32,681 | INFO     | [monitor] cgroup control has ended
[2026-03-31 06:12:39] 2026-03-31 04:12:33,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22685077632832)>', '<ExcThread(monitor, started 22684837881600)>']
[2026-03-31 06:12:39] 2026-03-31 04:12:34,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 06:12:39] 2026-03-31 04:12:34,374 | INFO     | [monitor] control thread has ended
[2026-03-31 06:12:39] 2026-03-31 04:12:38,887 | INFO     | all workflow threads have been joined
[2026-03-31 06:12:39] 2026-03-31 04:12:38,887 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 06:12:39] 2026-03-31 04:12:38,887 | INFO     | traces error code: 0
[2026-03-31 06:12:39] 2026-03-31 04:12:38,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 06:12:39] 2026-03-31 04:12:39,045 [wrapper] ==== pilot stdout END ====
[2026-03-31 06:12:39] 2026-03-31 04:12:39,049 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 06:12:39] 2026-03-31 04:12:39,053 [wrapper] pilotpid: 1675034
[2026-03-31 06:12:39] 2026-03-31 04:12:39,058 [wrapper] Pilot exit status: 0
[2026-03-31 06:12:39] 2026-03-31 04:12:39,093 [wrapper] pandaids: 7071839389
[2026-03-31 06:12:39] 2026-03-31 04:12:39,296 [wrapper] cleanup supervisor_pilot 2238327 1675035
[2026-03-31 06:12:39] 2026-03-31 04:12:39,302 [wrapper] Test setup, not cleaning
[2026-03-31 06:12:39] 2026-03-31 04:12:39,306 [wrapper] apfmon messages muted
[2026-03-31 06:12:39] 2026-03-31 04:12:39,310 [wrapper] ==== wrapper stdout END ====
[2026-03-31 06:12:39] 2026-03-31 04:12:39,313 [wrapper] ==== wrapper stderr END ====
[2026-03-31 06:12:39]  *** Error codes and diagnostics ***
[2026-03-31 06:12:39]     "exeErrorCode": 0,
[2026-03-31 06:12:39]     "exeErrorDiag": "",
[2026-03-31 06:12:39]     "pilotErrorCode": 0,
[2026-03-31 06:12:39]     "pilotErrorDiag": "",
[2026-03-31 06:12:39]  *** Listing of results directory ***
[2026-03-31 06:12:39] total 456508
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc    585013 Mar 28 03:21 pilot3.tar.gz
[2026-03-31 06:12:39] -rwx------. 1 boinc boinc     36322 Mar 28 03:25 runpilot2-wrapper.sh
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc      5118 Mar 28 03:26 queuedata.json
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc       100 Mar 31 00:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 06:12:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 00:40 run_atlas
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc       105 Mar 31 00:40 job.xml
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc      6624 Mar 31 00:40 init_data.xml
[2026-03-31 06:12:39] -rw-r--r--. 2 boinc boinc 237883096 Mar 31 00:40 EVNT.49131703._000002.pool.root.1
[2026-03-31 06:12:39] -rw-r--r--. 2 boinc boinc     15845 Mar 31 00:40 start_atlas.sh
[2026-03-31 06:12:39] drwxrwx--x. 2 boinc boinc      4096 Mar 31 00:40 shared
[2026-03-31 06:12:39] -rw-r--r--. 2 boinc boinc    597550 Mar 31 00:40 input.tar.gz
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc         0 Mar 31 00:40 boinc_lockfile
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc      2613 Mar 31 00:40 pandaJob.out
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc   1004000 Mar 31 00:40 agis_schedconf.cvmfs.json
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc       444 Mar 31 00:40 workernode_map.json
[2026-03-31 06:12:39] drwx------. 5 boinc boinc      4096 Mar 31 00:41 pilot3
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc 219271334 Mar 31 06:11 HITS.49179534._000434.pool.root.1
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc       530 Mar 31 06:11 boinc_task_state.xml
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc      1030 Mar 31 06:11 memory_monitor_summary.json
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc   1511579 Mar 31 06:11 agis_ddmendpoints.agis.ALL.json
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc    468794 Mar 31 06:11 log.49179534._000434.job.log.tgz.1
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc      6345 Mar 31 06:11 heartbeat.json
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc      8192 Mar 31 06:12 boinc_mmap_file
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc        28 Mar 31 06:12 wrapper_checkpoint.txt
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc        95 Mar 31 06:12 pilot_heartbeat.json
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc      5018 Mar 31 06:12 pilotlog.txt
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc   2715103 Mar 31 06:12 log.49179534._000434.job.log.1
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc       357 Mar 31 06:12 output.list
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc       620 Mar 31 06:12 runtime_log
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc   3205120 Mar 31 06:12 result.tar.gz
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc      9222 Mar 31 06:12 runtime_log.err
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc       666 Mar 31 06:12 g2PNDmyXYQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmvOGKDmVfS1Vn.diag
[2026-03-31 06:12:39] -rw-r--r--. 1 boinc boinc     21142 Mar 31 06:12 stderr.txt
[2026-03-31 06:12:39] HITS file was successfully produced:
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc 219271334 Mar 31 06:11 shared/HITS.pool.root.1
[2026-03-31 06:12:39]  *** Contents of shared directory: ***
[2026-03-31 06:12:39] total 450184
[2026-03-31 06:12:39] -rw-r--r--. 2 boinc boinc 237883096 Mar 31 00:40 ATLAS.root_0
[2026-03-31 06:12:39] -rw-r--r--. 2 boinc boinc     15845 Mar 31 00:40 start_atlas.sh
[2026-03-31 06:12:39] -rw-r--r--. 2 boinc boinc    597550 Mar 31 00:40 input.tar.gz
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc 219271334 Mar 31 06:11 HITS.pool.root.1
[2026-03-31 06:12:39] -rw-------. 1 boinc boinc   3205120 Mar 31 06:12 result.tar.gz
06:12:41 (1670615): run_atlas exited; CPU time 77585.772944
06:12:41 (1670615): called boinc_finish(0)

</stderr_txt>
]]>

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