Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:10:50 (2925446): wrapper (7.7.26015): starting
23:10:50 (2925446): wrapper: running run_atlas (--nthreads 4)
[2026-03-30 23:10:50] Arguments: --nthreads 4
[2026-03-30 23:10:50] Threads: 4
[2026-03-30 23:10:50] Checking for CVMFS
[2026-03-30 23:10:50] No cvmfs_config command found, will try listing directly
[2026-03-30 23:10:50] CVMFS is ok
[2026-03-30 23:10:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 23:10:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 23:10:50] Further information can be found at the LHC@home message board.
[2026-03-30 23:10:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 23:10:50] Checking for apptainer binary...
[2026-03-30 23:10:50] which: no apptainer in ((null))
[2026-03-30 23:10:50] apptainer is not installed, using version from CVMFS
[2026-03-30 23:10:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 23:10:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-03-30 23:10:50] apptainer works
[2026-03-30 23:10:50] Set ATHENA_PROC_NUMBER=4
[2026-03-30 23:10:50] Set ATHENA_CORE_NUMBER=4
[2026-03-30 23:10:50] Starting ATLAS job with PandaID=7063871210
[2026-03-30 23:10:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 02:10:33]  *** The last 200 lines of the pilot log: ***
[2026-03-31 02:10:33] 2026-03-31 00:09:43,422 | INFO     | total number of processed events: 400 (read)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,433 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7063871210/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,434 | INFO     | extracted standard info from prmon json
[2026-03-31 02:10:33] 2026-03-31 00:09:43,434 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 02:10:33] 2026-03-31 00:09:43,434 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-31 02:10:33] 2026-03-31 00:09:43,434 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 02:10:33] 2026-03-31 00:09:43,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 02:10:33] 2026-03-31 00:09:43,437 | INFO     | fitting pss+swap vs Time
[2026-03-31 02:10:33] 2026-03-31 00:09:43,438 | INFO     | sum of square deviations: 1690450300.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,439 | INFO     | sum of deviations: -425568695.9999981
[2026-03-31 02:10:33] 2026-03-31 00:09:43,439 | INFO     | mean x: 1774910438.5
[2026-03-31 02:10:33] 2026-03-31 00:09:43,439 | INFO     | mean y: 2317586.1931818184
[2026-03-31 02:10:33] 2026-03-31 00:09:43,439 | INFO     | intersect: 449149013.78926665
[2026-03-31 02:10:33] 2026-03-31 00:09:43,440 | INFO     | chi2: 2.1592099109147105
[2026-03-31 02:10:33] 2026-03-31 00:09:43,440 | INFO     | sum of square deviations: 1550429070.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,441 | INFO     | sum of deviations: 10498735437.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,441 | INFO     | mean x: 1774910286.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,441 | INFO     | mean y: 2329208.035087719
[2026-03-31 02:10:33] 2026-03-31 00:09:43,441 | INFO     | intersect: -12016481505.520487
[2026-03-31 02:10:33] 2026-03-31 00:09:43,441 | INFO     | chi2: 1.363989599222806
[2026-03-31 02:10:33] 2026-03-31 00:09:43,441 | INFO     | current chi2=1.363989599222806 (change=36.82922663850796 %)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,442 | INFO     | sum of square deviations: 1418361477.5
[2026-03-31 02:10:33] 2026-03-31 00:09:43,443 | INFO     | sum of deviations: 10215722002.499994
[2026-03-31 02:10:33] 2026-03-31 00:09:43,443 | INFO     | mean x: 1774910133.5
[2026-03-31 02:10:33] 2026-03-31 00:09:43,443 | INFO     | mean y: 2328881.2108433736
[2026-03-31 02:10:33] 2026-03-31 00:09:43,443 | INFO     | intersect: -12781428144.68889
[2026-03-31 02:10:33] 2026-03-31 00:09:43,443 | INFO     | chi2: 1.3650294794868076
[2026-03-31 02:10:33] 2026-03-31 00:09:43,443 | INFO     | current chi2=1.3650294794868076 (change=-0.07623813734314548 %)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,443 | INFO     | right removable region: 165
[2026-03-31 02:10:33] 2026-03-31 00:09:43,444 | INFO     | sum of square deviations: 1550429070.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,444 | INFO     | sum of deviations: -23180994544.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,445 | INFO     | mean x: 1774910591.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,445 | INFO     | mean y: 2342027.847953216
[2026-03-31 02:10:33] 2026-03-31 00:09:43,445 | INFO     | intersect: 26539636459.549248
[2026-03-31 02:10:33] 2026-03-31 00:09:43,445 | INFO     | chi2: 0.8394650499378356
[2026-03-31 02:10:33] 2026-03-31 00:09:43,445 | INFO     | current chi2=0.8394650499378356 (change=61.121656320009606 %)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,445 | INFO     | sum of square deviations: 1418361477.5
[2026-03-31 02:10:33] 2026-03-31 00:09:43,446 | INFO     | sum of deviations: -22242786880.5
[2026-03-31 02:10:33] 2026-03-31 00:09:43,446 | INFO     | mean x: 1774910743.5
[2026-03-31 02:10:33] 2026-03-31 00:09:43,447 | INFO     | mean y: 2340942.0903614457
[2026-03-31 02:10:33] 2026-03-31 00:09:43,447 | INFO     | intersect: 27836544017.857628
[2026-03-31 02:10:33] 2026-03-31 00:09:43,447 | INFO     | chi2: 0.8396249557294968
[2026-03-31 02:10:33] 2026-03-31 00:09:43,447 | INFO     | current chi2=0.8396249557294968 (change=-0.019048534739247776 %)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,447 | INFO     | left removable region: 20
[2026-03-31 02:10:33] 2026-03-31 00:09:43,447 | INFO     | sum of square deviations: 945282840.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,448 | INFO     | sum of deviations: -8876932158.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,448 | INFO     | mean x: 1774910713.0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,448 | INFO     | mean y: 2351559.0620689653
[2026-03-31 02:10:33] 2026-03-31 00:09:43,448 | INFO     | intersect: 16670126873.600105
[2026-03-31 02:10:33] 2026-03-31 00:09:43,449 | INFO     | chi2: 0.018793184413025937
[2026-03-31 02:10:33] 2026-03-31 00:09:43,449 | INFO     | current memory leak: -9.39 B/s (using 145 data points, chi2=0.02)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,449 | INFO     | could have reported an average CPU frequency of 2510 MHz (9 samples)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,449 | INFO     | ..............................
[2026-03-31 02:10:33] 2026-03-31 00:09:43,450 | INFO     | . Timing measurements:
[2026-03-31 02:10:33] 2026-03-31 00:09:43,450 | INFO     | . get job = 0 s
[2026-03-31 02:10:33] 2026-03-31 00:09:43,450 | INFO     | . initial setup = 7 s
[2026-03-31 02:10:33] 2026-03-31 00:09:43,450 | INFO     | . payload setup = 12 s
[2026-03-31 02:10:33] 2026-03-31 00:09:43,450 | INFO     | . stage-in = 0 s
[2026-03-31 02:10:33] 2026-03-31 00:09:43,450 | INFO     | . payload execution = 10683 s
[2026-03-31 02:10:33] 2026-03-31 00:09:43,450 | INFO     | . stage-out = 0 s
[2026-03-31 02:10:33] 2026-03-31 00:09:43,450 | INFO     | . log creation = 0 s
[2026-03-31 02:10:33] 2026-03-31 00:09:43,450 | INFO     | ..............................
[2026-03-31 02:10:33] 2026-03-31 00:09:43,876 | INFO     | time since job start (10713s) is within the limit (345600.0s)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,894 | INFO     | 
[2026-03-31 02:10:33] 2026-03-31 00:09:43,894 | INFO     | job summary report
[2026-03-31 02:10:33] 2026-03-31 00:09:43,894 | INFO     | --------------------------------------------------
[2026-03-31 02:10:33] 2026-03-31 00:09:43,894 | INFO     | PanDA job id: 7063871210
[2026-03-31 02:10:33] 2026-03-31 00:09:43,894 | INFO     | task id: 48955015
[2026-03-31 02:10:33] 2026-03-31 00:09:43,894 | INFO     | errors: (none)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,894 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | pilot state: finished 
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | transexitcode: 0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | exeerrorcode: 0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | exeerrordiag: 
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | exitcode: 0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | exitmsg: OK
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | cpuconsumptiontime: 40073 s
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | nevents: 400
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | neventsw: 0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | pid: 2934410
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | pgrp: 2934410
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | corecount: 4
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | event service: False
[2026-03-31 02:10:33] 2026-03-31 00:09:43,895 | INFO     | sizes: {0: 2280249, 11: 2280249, 10699: 2309224, 10701: 2318502}
[2026-03-31 02:10:33] 2026-03-31 00:09:43,896 | INFO     | --------------------------------------------------
[2026-03-31 02:10:33] 2026-03-31 00:09:43,896 | INFO     | 
[2026-03-31 02:10:33] 2026-03-31 00:09:43,896 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/0
[2026-03-31 02:10:33] 2026-03-31 00:09:43,914 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,914 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,914 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,914 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,915 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 02:10:33] 2026-03-31 00:09:43,916 | INFO     | job 7063871210 has completed (purged errors)
[2026-03-31 02:10:33] 2026-03-31 00:09:43,916 | INFO     | overall cleanup function is called
[2026-03-31 02:10:33] 2026-03-31 00:09:44,923 | INFO     | --- collectZombieJob: --- 10, [2934410]
[2026-03-31 02:10:33] 2026-03-31 00:09:44,923 | INFO     | zombie collector waiting for pid 2934410
[2026-03-31 02:10:33] 2026-03-31 00:09:44,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 02:10:33] 2026-03-31 00:09:44,923 | INFO     | collected zombie processes
[2026-03-31 02:10:33] 2026-03-31 00:09:44,923 | INFO     | will attempt to kill all subprocesses of pid=2934410
[2026-03-31 02:10:33] 2026-03-31 00:09:45,282 | INFO     | process IDs to be killed: [2934410] (in reverse order)
[2026-03-31 02:10:33] 2026-03-31 00:09:45,410 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 02:10:33] 2026-03-31 00:09:45,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 02:10:33] 2026-03-31 00:09:45,422 | INFO     | did not find any defunct processes belonging to 2934410
[2026-03-31 02:10:33] 2026-03-31 00:09:45,433 | INFO     | did not find any defunct processes belonging to 2934410
[2026-03-31 02:10:33] 2026-03-31 00:09:45,433 | INFO     | ready for new job
[2026-03-31 02:10:33] 2026-03-31 00:09:45,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-31 02:10:33] 2026-03-31 00:09:45,436 | INFO     | **************************************
[2026-03-31 02:10:33] 2026-03-31 00:09:45,436 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-31 02:10:33] 2026-03-31 00:09:45,436 | INFO     | **************************************
[2026-03-31 02:10:33] 2026-03-31 00:09:45,436 | INFO     | 
[2026-03-31 02:10:33] 2026-03-31 00:09:45,439 | INFO     | architecture information:
[2026-03-31 02:10:33] 2026-03-31 00:09:45,440 | INFO     | executing command: cat /etc/os-release
[2026-03-31 02:10:33] 2026-03-31 00:09:45,454 | INFO     | cat /etc/os-release:
[2026-03-31 02:10:33] NAME="CentOS Linux"
[2026-03-31 02:10:33] VERSION="7 (Core)"
[2026-03-31 02:10:33] ID="centos"
[2026-03-31 02:10:33] ID_LIKE="rhel fedora"
[2026-03-31 02:10:33] VERSION_ID="7"
[2026-03-31 02:10:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 02:10:33] ANSI_COLOR="0;31"
[2026-03-31 02:10:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 02:10:33] HOME_URL="https://www.centos.org/"
[2026-03-31 02:10:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 02:10:33] 
[2026-03-31 02:10:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 02:10:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 02:10:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 02:10:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 02:10:33] 
[2026-03-31 02:10:33] 2026-03-31 00:09:45,454 | INFO     | **************************************
[2026-03-31 02:10:33] 2026-03-31 00:09:45,957 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-03-31 02:10:33] 2026-03-31 00:09:45,972 | INFO     | sufficient remaining disk space (26834108416 B)
[2026-03-31 02:10:33] 2026-03-31 00:09:45,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 02:10:33] 2026-03-31 00:09:45,973 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 02:10:33] 2026-03-31 00:09:45,973 | INFO     | update_server=False
[2026-03-31 02:10:33] 2026-03-31 00:09:45,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-31 02:10:33] 2026-03-31 00:09:46,032 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 02:10:33] 2026-03-31 00:09:46,032 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 02:10:33] 2026-03-31 00:09:46,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 02:10:33] 2026-03-31 00:09:46,032 | INFO     | will abort loop
[2026-03-31 02:10:33] 2026-03-31 00:09:46,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 02:10:33] 2026-03-31 00:09:46,375 | INFO     | all payload control threads have been joined
[2026-03-31 02:10:33] 2026-03-31 00:09:46,579 | INFO     | all data control threads have been joined
[2026-03-31 02:10:33] 2026-03-31 00:09:46,978 | INFO     | [job] retrieve thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:47,037 | INFO     | [job] job monitor thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:47,330 | INFO     | [payload] validate_post thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:47,380 | INFO     | [payload] control thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:47,504 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:47,584 | INFO     | [data] control thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:47,646 | INFO     | all job control threads have been joined
[2026-03-31 02:10:33] 2026-03-31 00:09:47,741 | INFO     | [job] validate thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:48,017 | INFO     | [data] copytool_in thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:48,062 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:48,177 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:48,234 | INFO     | [data] copytool_out thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:48,373 | INFO     | [payload] failed_post thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:48,440 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:48,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 02:10:33] 2026-03-31 00:09:48,651 | INFO     | [job] control thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:49,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 02:10:33] 2026-03-31 00:09:49,550 | INFO     | [job] queue monitor thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:09:53,428 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 02:10:33] 2026-03-31 00:10:17,420 | INFO     | PID=2929563 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 02:10:33] 2026-03-31 00:10:17,420 | INFO     | .. there are 12 such processes running
[2026-03-31 02:10:33] 2026-03-31 00:10:17,421 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 02:10:33] 2026-03-31 00:10:17,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 02:10:33] 2026-03-31 00:10:17,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 02:10:33] 2026-03-31 00:10:28,094 | INFO     | [monitor] cgroup control has ended
[2026-03-31 02:10:33] 2026-03-31 00:10:28,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22992688592704)>', '<ExcThread(monitor, started 22992439731968)>']
[2026-03-31 02:10:33] 2026-03-31 00:10:29,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 02:10:33] 2026-03-31 00:10:29,481 | INFO     | [monitor] control thread has ended
[2026-03-31 02:10:33] 2026-03-31 00:10:33,641 | INFO     | all workflow threads have been joined
[2026-03-31 02:10:33] 2026-03-31 00:10:33,641 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 02:10:33] 2026-03-31 00:10:33,641 | INFO     | traces error code: 0
[2026-03-31 02:10:33] 2026-03-31 00:10:33,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 02:10:33] 2026-03-31 00:10:33,790 [wrapper] ==== pilot stdout END ====
[2026-03-31 02:10:33] 2026-03-31 00:10:33,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 02:10:33] 2026-03-31 00:10:33,796 [wrapper] pilotpid: 2929563
[2026-03-31 02:10:33] 2026-03-31 00:10:33,799 [wrapper] Pilot exit status: 0
[2026-03-31 02:10:33] 2026-03-31 00:10:33,811 [wrapper] pandaids: 7063871210
[2026-03-31 02:10:33] 2026-03-31 00:10:33,894 [wrapper] cleanup supervisor_pilot 3122436 2929564
[2026-03-31 02:10:33] 2026-03-31 00:10:33,897 [wrapper] Test setup, not cleaning
[2026-03-31 02:10:33] 2026-03-31 00:10:33,901 [wrapper] apfmon messages muted
[2026-03-31 02:10:33] 2026-03-31 00:10:33,904 [wrapper] ==== wrapper stdout END ====
[2026-03-31 02:10:33] 2026-03-31 00:10:33,907 [wrapper] ==== wrapper stderr END ====
[2026-03-31 02:10:33]  *** Error codes and diagnostics ***
[2026-03-31 02:10:33]     "exeErrorCode": 0,
[2026-03-31 02:10:33]     "exeErrorDiag": "",
[2026-03-31 02:10:33]     "pilotErrorCode": 0,
[2026-03-31 02:10:33]     "pilotErrorDiag": "",
[2026-03-31 02:10:33]  *** Listing of results directory ***
[2026-03-31 02:10:33] total 616716
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc    585013 Mar 28 03:21 pilot3.tar.gz
[2026-03-31 02:10:33] -rwx------. 1 boinc boinc     36322 Mar 28 03:23 runpilot2-wrapper.sh
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc      5118 Mar 28 03:26 queuedata.json
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc       100 Mar 30 23:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 02:10:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 30 23:10 run_atlas
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc       105 Mar 30 23:10 job.xml
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc      6563 Mar 30 23:10 init_data.xml
[2026-03-31 02:10:33] -rw-r--r--. 2 boinc boinc 436781229 Mar 30 23:10 EVNT.46701403._002337.pool.root.1
[2026-03-31 02:10:33] -rw-r--r--. 2 boinc boinc     15845 Mar 30 23:10 start_atlas.sh
[2026-03-31 02:10:33] drwxrwx--x. 2 boinc boinc      4096 Mar 30 23:10 shared
[2026-03-31 02:10:33] -rw-r--r--. 2 boinc boinc    597538 Mar 30 23:10 input.tar.gz
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc         0 Mar 30 23:10 boinc_lockfile
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc      2572 Mar 30 23:10 pandaJob.out
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc   1004000 Mar 30 23:11 agis_schedconf.cvmfs.json
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc   1511579 Mar 30 23:11 agis_ddmendpoints.agis.ALL.json
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc       452 Mar 30 23:11 workernode_map.json
[2026-03-31 02:10:33] drwx------. 5 boinc boinc      4096 Mar 30 23:11 pilot3
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc 187022030 Mar 31 02:09 HITS.48955015._026752.pool.root.1
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc       531 Mar 31 02:09 boinc_task_state.xml
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc      1045 Mar 31 02:09 memory_monitor_summary.json
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc    383745 Mar 31 02:09 log.48955015._026752.job.log.tgz.1
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc      6413 Mar 31 02:09 heartbeat.json
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc        95 Mar 31 02:10 pilot_heartbeat.json
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc      8192 Mar 31 02:10 boinc_mmap_file
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc        28 Mar 31 02:10 wrapper_checkpoint.txt
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc      5015 Mar 31 02:10 pilotlog.txt
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc   1506728 Mar 31 02:10 log.48955015._026752.job.log.1
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc       357 Mar 31 02:10 output.list
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc       620 Mar 31 02:10 runtime_log
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc   1904640 Mar 31 02:10 result.tar.gz
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc      9205 Mar 31 02:10 runtime_log.err
[2026-03-31 02:10:33] -rw-------. 1 boinc boinc       665 Mar 31 02:10 CEcLDmvVYQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmLkIKDmY2fXXo.diag
[2026-03-31 02:10:33] -rw-r--r--. 1 boinc boinc     20811 Mar 31 02:10 stderr.txt
[2026-03-31 02:10:34] HITS file was successfully produced:
[2026-03-31 02:10:34] -rw-------. 1 boinc boinc 187022030 Mar 31 02:09 shared/HITS.pool.root.1
[2026-03-31 02:10:34]  *** Contents of shared directory: ***
[2026-03-31 02:10:34] total 611656
[2026-03-31 02:10:34] -rw-r--r--. 2 boinc boinc 436781229 Mar 30 23:10 ATLAS.root_0
[2026-03-31 02:10:34] -rw-r--r--. 2 boinc boinc     15845 Mar 30 23:10 start_atlas.sh
[2026-03-31 02:10:34] -rw-r--r--. 2 boinc boinc    597538 Mar 30 23:10 input.tar.gz
[2026-03-31 02:10:34] -rw-------. 1 boinc boinc 187022030 Mar 31 02:09 HITS.pool.root.1
[2026-03-31 02:10:34] -rw-------. 1 boinc boinc   1904640 Mar 31 02:10 result.tar.gz
02:10:35 (2925446): run_atlas exited; CPU time 40513.115998
02:10:35 (2925446): called boinc_finish(0)

</stderr_txt>
]]>

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