Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:23:25 (3782904): wrapper (7.7.26015): starting
01:23:25 (3782904): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 01:23:25] Arguments: --nthreads 12
[2026-04-04 01:23:25] Threads: 12
[2026-04-04 01:23:25] Checking for CVMFS
[2026-04-04 01:23:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 01:23:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 01:23:26] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 01:23:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 01:23:27] 2.13.3.0 3021178 14090 72256 158060 2 94 3737462 4096001 17565 130560 0 63652413 99.984 903950 2211 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-04 01:23:27] CVMFS is ok
[2026-04-04 01:23:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 01:23:27] Checking for apptainer binary...
[2026-04-04 01:23:27] apptainer is not installed, using version from CVMFS
[2026-04-04 01:23:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 01:23:29] epyc7v12
[2026-04-04 01:23:29] apptainer works
[2026-04-04 01:23:29] Set ATHENA_PROC_NUMBER=12
[2026-04-04 01:23:29] Set ATHENA_CORE_NUMBER=12
[2026-04-04 01:23:29] Starting ATLAS job with PandaID=7071838286
[2026-04-04 01:23:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 07:54:59]  *** The last 200 lines of the pilot log: ***
[2026-04-04 07:54:59] 2026-04-04 07:53:57,682 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/0/PanDA_Pilot-7071838286/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,682 | INFO     | extracted standard info from prmon json
[2026-04-04 07:54:59] 2026-04-04 07:53:57,682 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 07:54:59] 2026-04-04 07:53:57,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 07:54:59] 2026-04-04 07:53:57,683 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 07:54:59] 2026-04-04 07:53:57,683 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 07:54:59] 2026-04-04 07:53:57,691 | INFO     | fitting pss+swap vs Time
[2026-04-04 07:54:59] 2026-04-04 07:53:57,692 | INFO     | sum of square deviations: 17420948032.0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,698 | INFO     | sum of deviations: 57689152287.99999
[2026-04-04 07:54:59] 2026-04-04 07:53:57,699 | INFO     | mean x: 1775277544.0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,699 | INFO     | mean y: 2668547.044386423
[2026-04-04 07:54:59] 2026-04-04 07:53:57,699 | INFO     | intersect: -5876130723.877094
[2026-04-04 07:54:59] 2026-04-04 07:53:57,700 | INFO     | chi2: 2.912397323071395
[2026-04-04 07:54:59] 2026-04-04 07:53:57,701 | INFO     | sum of square deviations: 16747530754.5
[2026-04-04 07:54:59] 2026-04-04 07:53:57,706 | INFO     | sum of deviations: 85021027496.00002
[2026-04-04 07:54:59] 2026-04-04 07:53:57,707 | INFO     | mean x: 1775277391.5
[2026-04-04 07:54:59] 2026-04-04 07:53:57,707 | INFO     | mean y: 2674668.037037037
[2026-04-04 07:54:59] 2026-04-04 07:53:57,707 | INFO     | intersect: -9009752902.82697
[2026-04-04 07:54:59] 2026-04-04 07:53:57,708 | INFO     | chi2: 2.073748676399902
[2026-04-04 07:54:59] 2026-04-04 07:53:57,708 | INFO     | current chi2=2.073748676399902 (change=28.79581848355291 %)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,709 | INFO     | sum of square deviations: 16091695202.0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,717 | INFO     | sum of deviations: 83319524606.0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,717 | INFO     | mean x: 1775277239.0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,717 | INFO     | mean y: 2674272.3672922254
[2026-04-04 07:54:59] 2026-04-04 07:53:57,717 | INFO     | intersect: -9189350168.8456
[2026-04-04 07:54:59] 2026-04-04 07:53:57,718 | INFO     | chi2: 2.0743034804856046
[2026-04-04 07:54:59] 2026-04-04 07:53:57,718 | INFO     | current chi2=2.0743034804856046 (change=-0.026753680039270245 %)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,718 | INFO     | right removable region: 372
[2026-04-04 07:54:59] 2026-04-04 07:53:57,718 | INFO     | sum of square deviations: 16747530754.5
[2026-04-04 07:54:59] 2026-04-04 07:53:57,723 | INFO     | sum of deviations: -24539635069.500004
[2026-04-04 07:54:59] 2026-04-04 07:53:57,723 | INFO     | mean x: 1775277696.5
[2026-04-04 07:54:59] 2026-04-04 07:53:57,723 | INFO     | mean y: 2687097.0714285714
[2026-04-04 07:54:59] 2026-04-04 07:53:57,723 | INFO     | intersect: 2603946199.5469933
[2026-04-04 07:54:59] 2026-04-04 07:53:57,724 | INFO     | chi2: 1.07869591340017
[2026-04-04 07:54:59] 2026-04-04 07:53:57,724 | INFO     | current chi2=1.07869591340017 (change=62.96192470529453 %)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,724 | INFO     | sum of square deviations: 16091695202.0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,729 | INFO     | sum of deviations: -40559115085.99999
[2026-04-04 07:54:59] 2026-04-04 07:53:57,729 | INFO     | mean x: 1775277849.0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,729 | INFO     | mean y: 2690815.241286863
[2026-04-04 07:54:59] 2026-04-04 07:53:57,729 | INFO     | intersect: 4477278339.013696
[2026-04-04 07:54:59] 2026-04-04 07:53:57,730 | INFO     | chi2: 1.0131662042486391
[2026-04-04 07:54:59] 2026-04-04 07:53:57,730 | INFO     | current chi2=1.0131662042486391 (change=6.0749010297975286 %)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,730 | INFO     | left removable region: 20
[2026-04-04 07:54:59] 2026-04-04 07:53:57,730 | INFO     | sum of square deviations: 13523929848.0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,735 | INFO     | sum of deviations: -15165558370.999998
[2026-04-04 07:54:59] 2026-04-04 07:53:57,735 | INFO     | mean x: 1775277818.5
[2026-04-04 07:54:59] 2026-04-04 07:53:57,735 | INFO     | mean y: 2697728.8181818184
[2026-04-04 07:54:59] 2026-04-04 07:53:57,736 | INFO     | intersect: 1993471097.4914033
[2026-04-04 07:54:59] 2026-04-04 07:53:57,736 | INFO     | chi2: 0.08984426053140168
[2026-04-04 07:54:59] 2026-04-04 07:53:57,736 | INFO     | current memory leak: -1.12 B/s (using 352 data points, chi2=0.09)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,746 | INFO     | could have reported an average CPU frequency of 2398 MHz (16 samples)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,746 | INFO     | ..............................
[2026-04-04 07:54:59] 2026-04-04 07:53:57,746 | INFO     | . Timing measurements:
[2026-04-04 07:54:59] 2026-04-04 07:53:57,747 | INFO     | . get job = 0 s
[2026-04-04 07:54:59] 2026-04-04 07:53:57,747 | INFO     | . initial setup = 14 s
[2026-04-04 07:54:59] 2026-04-04 07:53:57,747 | INFO     | . payload setup = 25 s
[2026-04-04 07:54:59] 2026-04-04 07:53:57,747 | INFO     | . stage-in = 0 s
[2026-04-04 07:54:59] 2026-04-04 07:53:57,747 | INFO     | . payload execution = 23349 s
[2026-04-04 07:54:59] 2026-04-04 07:53:57,747 | INFO     | . stage-out = 2 s
[2026-04-04 07:54:59] 2026-04-04 07:53:57,747 | INFO     | . log creation = 0 s
[2026-04-04 07:54:59] 2026-04-04 07:53:57,747 | INFO     | ..............................
[2026-04-04 07:54:59] 2026-04-04 07:53:57,871 | INFO     | 
[2026-04-04 07:54:59] 2026-04-04 07:53:57,872 | INFO     | job summary report
[2026-04-04 07:54:59] 2026-04-04 07:53:57,872 | INFO     | --------------------------------------------------
[2026-04-04 07:54:59] 2026-04-04 07:53:57,872 | INFO     | PanDA job id: 7071838286
[2026-04-04 07:54:59] 2026-04-04 07:53:57,872 | INFO     | task id: 49178447
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | errors: (none)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | pilot state: finished 
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | transexitcode: 0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | exeerrorcode: 0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | exeerrordiag: 
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | exitcode: 0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | exitmsg: OK
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | cpuconsumptiontime: 142530 s
[2026-04-04 07:54:59] 2026-04-04 07:53:57,873 | INFO     | nevents: 400
[2026-04-04 07:54:59] 2026-04-04 07:53:57,874 | INFO     | neventsw: 0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,874 | INFO     | pid: 3792423
[2026-04-04 07:54:59] 2026-04-04 07:53:57,874 | INFO     | pgrp: 3792423
[2026-04-04 07:54:59] 2026-04-04 07:53:57,874 | INFO     | corecount: 12
[2026-04-04 07:54:59] 2026-04-04 07:53:57,876 | INFO     | event service: False
[2026-04-04 07:54:59] 2026-04-04 07:53:57,876 | INFO     | sizes: {0: 2279874, 1: 2280335, 23378: 2315702, 23381: 2324746, 23383: 2325024}
[2026-04-04 07:54:59] 2026-04-04 07:53:57,876 | INFO     | --------------------------------------------------
[2026-04-04 07:54:59] 2026-04-04 07:53:57,876 | INFO     | 
[2026-04-04 07:54:59] 2026-04-04 07:53:57,877 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-04-04 07:54:59] 2026-04-04 07:53:57,917 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,918 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,918 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,919 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,920 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 07:54:59] 2026-04-04 07:53:57,920 | INFO     | job 7071838286 has completed (purged errors)
[2026-04-04 07:54:59] 2026-04-04 07:53:57,920 | INFO     | overall cleanup function is called
[2026-04-04 07:54:59] 2026-04-04 07:53:58,024 | INFO     | number of running child processes to parent process 3792423: 1
[2026-04-04 07:54:59] 2026-04-04 07:53:58,024 | INFO     | maximum number of monitored processes: 6
[2026-04-04 07:54:59] 2026-04-04 07:53:58,024 | INFO     | aborting job monitoring since job object (job id=7071838286) has expired
[2026-04-04 07:54:59] 2026-04-04 07:53:58,933 | INFO     | --- collectZombieJob: --- 10, [3792423]
[2026-04-04 07:54:59] 2026-04-04 07:53:58,933 | INFO     | zombie collector waiting for pid 3792423
[2026-04-04 07:54:59] 2026-04-04 07:53:58,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 07:54:59] 2026-04-04 07:53:58,934 | INFO     | collected zombie processes
[2026-04-04 07:54:59] 2026-04-04 07:53:58,934 | INFO     | will attempt to kill all subprocesses of pid=3792423
[2026-04-04 07:54:59] 2026-04-04 07:53:59,000 [wrapper] supervise_pilot (15 min periods counter: 27)
[2026-04-04 07:54:59] 2026-04-04 07:53:59,751 | INFO     | process IDs to be killed: [3792423] (in reverse order)
[2026-04-04 07:54:59] 2026-04-04 07:54:00,166 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 07:54:59] 2026-04-04 07:54:00,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 07:54:59] 2026-04-04 07:54:00,202 | INFO     | did not find any defunct processes belonging to 3792423
[2026-04-04 07:54:59] 2026-04-04 07:54:00,249 | INFO     | did not find any defunct processes belonging to 3792423
[2026-04-04 07:54:59] 2026-04-04 07:54:00,249 | INFO     | ready for new job
[2026-04-04 07:54:59] 2026-04-04 07:54:00,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 07:54:59] 2026-04-04 07:54:00,253 | INFO     | **************************************
[2026-04-04 07:54:59] 2026-04-04 07:54:00,253 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 07:54:59] 2026-04-04 07:54:00,253 | INFO     | **************************************
[2026-04-04 07:54:59] 2026-04-04 07:54:00,253 | INFO     | 
[2026-04-04 07:54:59] 2026-04-04 07:54:00,263 | INFO     | architecture information:
[2026-04-04 07:54:59] 2026-04-04 07:54:00,265 | INFO     | executing command: cat /etc/os-release
[2026-04-04 07:54:59] 2026-04-04 07:54:00,309 | INFO     | cat /etc/os-release:
[2026-04-04 07:54:59] NAME="CentOS Linux"
[2026-04-04 07:54:59] VERSION="7 (Core)"
[2026-04-04 07:54:59] ID="centos"
[2026-04-04 07:54:59] ID_LIKE="rhel fedora"
[2026-04-04 07:54:59] VERSION_ID="7"
[2026-04-04 07:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 07:54:59] ANSI_COLOR="0;31"
[2026-04-04 07:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 07:54:59] HOME_URL="https://www.centos.org/"
[2026-04-04 07:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 07:54:59] 
[2026-04-04 07:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 07:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 07:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 07:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 07:54:59] 
[2026-04-04 07:54:59] 2026-04-04 07:54:00,310 | INFO     | **************************************
[2026-04-04 07:54:59] 2026-04-04 07:54:00,813 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-04-04 07:54:59] 2026-04-04 07:54:00,861 | INFO     | sufficient remaining disk space (339542540288 B)
[2026-04-04 07:54:59] 2026-04-04 07:54:00,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 07:54:59] 2026-04-04 07:54:00,861 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 07:54:59] 2026-04-04 07:54:00,862 | INFO     | update_server=False
[2026-04-04 07:54:59] 2026-04-04 07:54:00,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 07:54:59] 2026-04-04 07:54:01,106 | INFO     | all data control threads have been joined
[2026-04-04 07:54:59] 2026-04-04 07:54:01,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 07:54:59] 2026-04-04 07:54:01,546 | INFO     | aborting loop
[2026-04-04 07:54:59] 2026-04-04 07:54:01,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 07:54:59] 2026-04-04 07:54:01,798 | INFO     | all payload control threads have been joined
[2026-04-04 07:54:59] 2026-04-04 07:54:01,868 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:01,869 | INFO     | [job] retrieve thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:01,968 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:02,026 | INFO     | [payload] failed_post thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:02,044 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:02,111 | INFO     | [data] control thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:02,503 | INFO     | all job control threads have been joined
[2026-04-04 07:54:59] 2026-04-04 07:54:02,551 | INFO     | [job] job monitor thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:02,566 | INFO     | [payload] validate_post thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:02,803 | INFO     | [payload] control thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:02,874 | INFO     | [job] validate thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:02,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 07:54:59] 2026-04-04 07:54:03,331 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:03,365 | INFO     | [data] copytool_in thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:03,508 | INFO     | [job] control thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:03,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 07:54:59] 2026-04-04 07:54:03,681 | INFO     | [data] copytool_out thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:03,888 | INFO     | [job] queue monitor thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:07,677 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 07:54:59] 2026-04-04 07:54:31,712 | INFO     | PID=3787438 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-04 07:54:59] 2026-04-04 07:54:31,712 | INFO     | .. there are 20 such processes running
[2026-04-04 07:54:59] 2026-04-04 07:54:31,713 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 07:54:59] 2026-04-04 07:54:31,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 07:54:59] 2026-04-04 07:54:31,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 07:54:59] 2026-04-04 07:54:52,714 | INFO     | [monitor] cgroup control has ended
[2026-04-04 07:54:59] 2026-04-04 07:54:53,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138442508117824)>', '<ExcThread(monitor, started 138441668937472)>']
[2026-04-04 07:54:59] 2026-04-04 07:54:53,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 07:54:59] 2026-04-04 07:54:53,829 | INFO     | [monitor] control thread has ended
[2026-04-04 07:54:59] 2026-04-04 07:54:58,744 | INFO     | all workflow threads have been joined
[2026-04-04 07:54:59] 2026-04-04 07:54:58,744 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 07:54:59] 2026-04-04 07:54:58,745 | INFO     | traces error code: 0
[2026-04-04 07:54:59] 2026-04-04 07:54:58,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 07:54:59] 2026-04-04 07:54:58,955 [wrapper] ==== pilot stdout END ====
[2026-04-04 07:54:59] 2026-04-04 07:54:58,963 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 07:54:59] 2026-04-04 07:54:58,971 [wrapper] pilotpid: 3787438
[2026-04-04 07:54:59] 2026-04-04 07:54:58,982 [wrapper] Pilot exit status: 0
[2026-04-04 07:54:59] 2026-04-04 07:54:59,019 [wrapper] pandaids: 7071838286
[2026-04-04 07:54:59] 2026-04-04 07:54:59,191 [wrapper] cleanup supervisor_pilot   72870 3787439
[2026-04-04 07:54:59] 2026-04-04 07:54:59,198 [wrapper] Test setup, not cleaning
[2026-04-04 07:54:59] 2026-04-04 07:54:59,208 [wrapper] apfmon messages muted
[2026-04-04 07:54:59] 2026-04-04 07:54:59,217 [wrapper] ==== wrapper stdout END ====
[2026-04-04 07:54:59] 2026-04-04 07:54:59,225 [wrapper] ==== wrapper stderr END ====
[2026-04-04 07:54:59]  *** Error codes and diagnostics ***
[2026-04-04 07:54:59]     "exeErrorCode": 0,
[2026-04-04 07:54:59]     "exeErrorDiag": "",
[2026-04-04 07:54:59]     "pilotErrorCode": 0,
[2026-04-04 07:54:59]     "pilotErrorDiag": "",
[2026-04-04 07:54:59]  *** Listing of results directory ***
[2026-04-04 07:54:59] total 489156
[2026-04-04 07:54:59] -rw-r--r-- 1 boinc boinc    585013 Mar 28 02:21 pilot3.tar.gz
[2026-04-04 07:54:59] -rw-r--r-- 1 boinc boinc      5118 Mar 28 02:22 queuedata.json
[2026-04-04 07:54:59] -rwx------ 1 boinc boinc     36322 Mar 28 02:22 runpilot2-wrapper.sh
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc       100 Apr  4 01:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 07:54:59] -rwxr-xr-x 1 boinc boinc      7986 Apr  4 01:23 run_atlas
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc       105 Apr  4 01:23 job.xml
[2026-04-04 07:54:59] -rw-r--r-- 2 boinc boinc 245973722 Apr  4 01:23 EVNT.49128800._000017.pool.root.1
[2026-04-04 07:54:59] -rw-r--r-- 2 boinc boinc     15845 Apr  4 01:23 start_atlas.sh
[2026-04-04 07:54:59] drwxrwx--x 2 boinc boinc      4096 Apr  4 01:23 shared
[2026-04-04 07:54:59] -rw-r--r-- 2 boinc boinc    597549 Apr  4 01:23 input.tar.gz
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc      6555 Apr  4 01:23 init_data.xml
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc         0 Apr  4 01:23 boinc_setup_complete
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc         0 Apr  4 01:23 boinc_lockfile
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc      2600 Apr  4 01:23 pandaJob.out
[2026-04-04 07:54:59] -rw------- 1 boinc boinc   1005173 Apr  4 01:24 agis_schedconf.cvmfs.json
[2026-04-04 07:54:59] -rw------- 1 boinc boinc       420 Apr  4 01:24 workernode_map.json
[2026-04-04 07:54:59] drwx------ 5 boinc boinc      4096 Apr  4 01:24 pilot3
[2026-04-04 07:54:59] -rw------- 1 boinc boinc 243319788 Apr  4 07:53 HITS.49178447._001554.pool.root.1
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc       531 Apr  4 07:53 boinc_task_state.xml
[2026-04-04 07:54:59] -rw------- 1 boinc boinc        95 Apr  4 07:53 pilot_heartbeat.json
[2026-04-04 07:54:59] -rw------- 1 boinc boinc      1024 Apr  4 07:53 memory_monitor_summary.json
[2026-04-04 07:54:59] -rw------- 1 boinc boinc   1511579 Apr  4 07:53 agis_ddmendpoints.agis.ALL.json
[2026-04-04 07:54:59] -rw------- 1 boinc boinc    638872 Apr  4 07:53 log.49178447._001554.job.log.tgz.1
[2026-04-04 07:54:59] -rw------- 1 boinc boinc      6277 Apr  4 07:53 heartbeat.json
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc      8192 Apr  4 07:54 boinc_mmap_file
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc        29 Apr  4 07:54 wrapper_checkpoint.txt
[2026-04-04 07:54:59] -rw------- 1 boinc boinc      4845 Apr  4 07:54 pilotlog.txt
[2026-04-04 07:54:59] -rw------- 1 boinc boinc   3193593 Apr  4 07:54 log.49178447._001554.job.log.1
[2026-04-04 07:54:59] -rw------- 1 boinc boinc       357 Apr  4 07:54 output.list
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc       620 Apr  4 07:54 runtime_log
[2026-04-04 07:54:59] -rw------- 1 boinc boinc   3850240 Apr  4 07:54 result.tar.gz
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc      9167 Apr  4 07:54 runtime_log.err
[2026-04-04 07:54:59] -rw------- 1 boinc boinc       658 Apr  4 07:54 W7ALDm4UYQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmRdIKDmcqRoLo.diag
[2026-04-04 07:54:59] -rw-rw-r-- 1 boinc boinc     20849 Apr  4 07:54 stderr.txt
[2026-04-04 07:54:59] HITS file was successfully produced:
[2026-04-04 07:54:59] -rw------- 1 boinc boinc 243319788 Apr  4 07:53 shared/HITS.pool.root.1
[2026-04-04 07:54:59]  *** Contents of shared directory: ***
[2026-04-04 07:54:59] total 482200
[2026-04-04 07:54:59] -rw-r--r-- 2 boinc boinc 245973722 Apr  4 01:23 ATLAS.root_0
[2026-04-04 07:54:59] -rw-r--r-- 2 boinc boinc     15845 Apr  4 01:23 start_atlas.sh
[2026-04-04 07:54:59] -rw-r--r-- 2 boinc boinc    597549 Apr  4 01:23 input.tar.gz
[2026-04-04 07:54:59] -rw------- 1 boinc boinc 243319788 Apr  4 07:53 HITS.pool.root.1
[2026-04-04 07:54:59] -rw------- 1 boinc boinc   3850240 Apr  4 07:54 result.tar.gz
07:55:00 (3782904): run_atlas exited; CPU time 143990.661121
07:55:00 (3782904): called boinc_finish(0)

</stderr_txt>
]]>

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