Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:00:44 (2747885): wrapper (7.7.26015): starting
19:00:44 (2747885): wrapper: running run_atlas (--nthreads 12)
[2026-04-01 19:00:44] Arguments: --nthreads 12
[2026-04-01 19:00:44] Threads: 12
[2026-04-01 19:00:44] Checking for CVMFS
[2026-04-01 19:00:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-01 19:00:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-01 19:00:46] Running cvmfs_config stat atlas.cern.ch
[2026-04-01 19:00:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-01 19:00:47] 2.13.3.0 2686551 1390 50268 157968 0 49 2796569 4096000 912 130560 0 250966 99.972 53651 7364 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-01 19:00:47] CVMFS is ok
[2026-04-01 19:00:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 19:00:47] Checking for apptainer binary...
[2026-04-01 19:00:47] apptainer is not installed, using version from CVMFS
[2026-04-01 19:00:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 19:00:49] g6400
[2026-04-01 19:00:49] apptainer works
[2026-04-01 19:00:49] Set ATHENA_PROC_NUMBER=12
[2026-04-01 19:00:49] Set ATHENA_CORE_NUMBER=12
[2026-04-01 19:00:49] Starting ATLAS job with PandaID=7071836988
[2026-04-01 19:00:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 05:15:51]  *** The last 200 lines of the pilot log: ***
[2026-04-02 05:15:51] 2026-04-02 05:14:58,164 | INFO     | log transfer has been attempted: DONE
[2026-04-02 05:15:51] 2026-04-02 05:14:58,164 | INFO     | job 7071836988 has finished - writing final server update
[2026-04-02 05:15:51] 2026-04-02 05:14:58,164 | INFO     | total number of processed events: 400 (read)
[2026-04-02 05:15:51] 2026-04-02 05:14:58,182 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7071836988/memory_monitor_summary.json (trf name=prmon)
[2026-04-02 05:15:51] 2026-04-02 05:14:58,182 | INFO     | extracted standard info from prmon json
[2026-04-02 05:15:51] 2026-04-02 05:14:58,182 | INFO     | extracted standard memory fields from prmon json
[2026-04-02 05:15:51] 2026-04-02 05:14:58,183 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-02 05:15:51] 2026-04-02 05:14:58,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-02 05:15:51] 2026-04-02 05:14:58,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-02 05:15:51] 2026-04-02 05:14:58,217 | INFO     | fitting pss+swap vs Time
[2026-04-02 05:15:51] 2026-04-02 05:14:58,218 | INFO     | sum of square deviations: 67313262100.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,240 | INFO     | sum of deviations: 190958350543.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,240 | INFO     | mean x: 1775088582.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,240 | INFO     | mean y: 2673729.963394343
[2026-04-02 05:15:51] 2026-04-02 05:14:58,240 | INFO     | intersect: -5033005378.60313
[2026-04-02 05:15:51] 2026-04-02 05:14:58,241 | INFO     | chi2: 5.119470741918484
[2026-04-02 05:15:51] 2026-04-02 05:14:58,249 | INFO     | sum of square deviations: 65647165745.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,267 | INFO     | sum of deviations: 271315692761.99988
[2026-04-02 05:15:51] 2026-04-02 05:14:58,267 | INFO     | mean x: 1775088429.5
[2026-04-02 05:15:51] 2026-04-02 05:14:58,267 | INFO     | mean y: 2681046.77852349
[2026-04-02 05:15:51] 2026-04-02 05:14:58,267 | INFO     | intersect: -7333650103.21152
[2026-04-02 05:15:51] 2026-04-02 05:14:58,268 | INFO     | chi2: 3.7075497563815585
[2026-04-02 05:15:51] 2026-04-02 05:14:58,268 | INFO     | current chi2=3.7075497563815585 (change=27.579432654552456 %)
[2026-04-02 05:15:51] 2026-04-02 05:14:58,268 | INFO     | sum of square deviations: 64008790840.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,303 | INFO     | sum of deviations: 267650827646.00015
[2026-04-02 05:15:51] 2026-04-02 05:14:58,303 | INFO     | mean x: 1775088277.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,303 | INFO     | mean y: 2680705.742808799
[2026-04-02 05:15:51] 2026-04-02 05:14:58,303 | INFO     | intersect: -7419797367.173127
[2026-04-02 05:15:51] 2026-04-02 05:14:58,304 | INFO     | chi2: 3.7082092027841096
[2026-04-02 05:15:51] 2026-04-02 05:14:58,304 | INFO     | current chi2=3.7082092027841096 (change=-0.017786582672722068 %)
[2026-04-02 05:15:51] 2026-04-02 05:14:58,304 | INFO     | right removable region: 590
[2026-04-02 05:15:51] 2026-04-02 05:14:58,305 | INFO     | sum of square deviations: 65647165745.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,334 | INFO     | sum of deviations: 1682303109.5
[2026-04-02 05:15:51] 2026-04-02 05:14:58,335 | INFO     | mean x: 1775088734.5
[2026-04-02 05:15:51] 2026-04-02 05:14:58,335 | INFO     | mean y: 2691034.397651007
[2026-04-02 05:15:51] 2026-04-02 05:14:58,335 | INFO     | intersect: -42798169.34478498
[2026-04-02 05:15:51] 2026-04-02 05:14:58,335 | INFO     | chi2: 1.888201151233302
[2026-04-02 05:15:51] 2026-04-02 05:14:58,335 | INFO     | current chi2=1.888201151233302 (change=63.117258669482844 %)
[2026-04-02 05:15:51] 2026-04-02 05:14:58,336 | INFO     | sum of square deviations: 64008790840.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,351 | INFO     | sum of deviations: -49135130889.00001
[2026-04-02 05:15:51] 2026-04-02 05:14:58,351 | INFO     | mean x: 1775088887.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,352 | INFO     | mean y: 2695762.6057529612
[2026-04-02 05:15:51] 2026-04-02 05:14:58,352 | INFO     | intersect: 1365308985.8483613
[2026-04-02 05:15:51] 2026-04-02 05:14:58,352 | INFO     | chi2: 1.656678437126516
[2026-04-02 05:15:51] 2026-04-02 05:14:58,352 | INFO     | current chi2=1.656678437126516 (change=12.26154925048976 %)
[2026-04-02 05:15:51] 2026-04-02 05:14:58,352 | INFO     | left removable region: 20
[2026-04-02 05:15:51] 2026-04-02 05:14:58,353 | INFO     | sum of square deviations: 57425086002.5
[2026-04-02 05:15:51] 2026-04-02 05:14:58,386 | INFO     | sum of deviations: -17477004348.0
[2026-04-02 05:15:51] 2026-04-02 05:14:58,386 | INFO     | mean x: 1775088856.5
[2026-04-02 05:15:51] 2026-04-02 05:14:58,386 | INFO     | mean y: 2707902.540350877
[2026-04-02 05:15:51] 2026-04-02 05:14:58,386 | INFO     | intersect: 542946286.5418351
[2026-04-02 05:15:51] 2026-04-02 05:14:58,387 | INFO     | chi2: 0.05645359541503162
[2026-04-02 05:15:51] 2026-04-02 05:14:58,387 | INFO     | current memory leak: -0.30 B/s (using 570 data points, chi2=0.06)
[2026-04-02 05:15:51] 2026-04-02 05:14:58,387 | INFO     | could have reported an average CPU frequency of 3999 MHz (24 samples)
[2026-04-02 05:15:51] 2026-04-02 05:14:58,387 | INFO     | ..............................
[2026-04-02 05:15:51] 2026-04-02 05:14:58,387 | INFO     | . Timing measurements:
[2026-04-02 05:15:51] 2026-04-02 05:14:58,388 | INFO     | . get job = 0 s
[2026-04-02 05:15:51] 2026-04-02 05:14:58,388 | INFO     | . initial setup = 36 s
[2026-04-02 05:15:51] 2026-04-02 05:14:58,388 | INFO     | . payload setup = 78 s
[2026-04-02 05:15:51] 2026-04-02 05:14:58,388 | INFO     | . stage-in = 0 s
[2026-04-02 05:15:51] 2026-04-02 05:14:58,388 | INFO     | . payload execution = 36635 s
[2026-04-02 05:15:51] 2026-04-02 05:14:58,388 | INFO     | . stage-out = 3 s
[2026-04-02 05:15:51] 2026-04-02 05:14:58,388 | INFO     | . log creation = 0 s
[2026-04-02 05:15:51] 2026-04-02 05:14:58,388 | INFO     | ..............................
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | 
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | job summary report
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | --------------------------------------------------
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | PanDA job id: 7071836988
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | task id: 49176362
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | errors: (none)
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | pilot state: finished 
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | transexitcode: 0
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | exeerrorcode: 0
[2026-04-02 05:15:51] 2026-04-02 05:14:59,064 | INFO     | exeerrordiag: 
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | exitcode: 0
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | exitmsg: OK
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | cpuconsumptiontime: 73699 s
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | nevents: 400
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | neventsw: 0
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | pid: 2756280
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | pgrp: 2756280
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | corecount: 12
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | event service: False
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | sizes: {0: 2279858, 1: 2254056, 2: 2280347, 13: 2280347, 36717: 2321103, 36720: 2330147, 36721: 2330331, 36722: 2330525}
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | --------------------------------------------------
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | 
[2026-04-02 05:15:51] 2026-04-02 05:14:59,065 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-04-02 05:15:51] 2026-04-02 05:14:59,106 | INFO     | time since job start (36736s) is within the limit (345600.0s)
[2026-04-02 05:15:51] 2026-04-02 05:14:59,193 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,195 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,195 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,195 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,199 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-02 05:15:51] 2026-04-02 05:14:59,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,200 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-02 05:15:51] 2026-04-02 05:14:59,200 | INFO     | job 7071836988 has completed (purged errors)
[2026-04-02 05:15:51] 2026-04-02 05:14:59,202 | INFO     | overall cleanup function is called
[2026-04-02 05:15:51] 2026-04-02 05:15:00,213 | INFO     | --- collectZombieJob: --- 10, [2756280]
[2026-04-02 05:15:51] 2026-04-02 05:15:00,214 | INFO     | zombie collector waiting for pid 2756280
[2026-04-02 05:15:51] 2026-04-02 05:15:00,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-02 05:15:51] 2026-04-02 05:15:00,216 | INFO     | collected zombie processes
[2026-04-02 05:15:51] 2026-04-02 05:15:00,216 | INFO     | will attempt to kill all subprocesses of pid=2756280
[2026-04-02 05:15:51] 2026-04-02 05:15:00,390 | INFO     | process IDs to be killed: [2756280] (in reverse order)
[2026-04-02 05:15:51] 2026-04-02 05:15:00,473 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 05:15:51] 2026-04-02 05:15:00,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 05:15:51] 2026-04-02 05:15:00,478 | INFO     | did not find any defunct processes belonging to 2756280
[2026-04-02 05:15:51] 2026-04-02 05:15:00,481 | INFO     | did not find any defunct processes belonging to 2756280
[2026-04-02 05:15:51] 2026-04-02 05:15:00,482 | INFO     | ready for new job
[2026-04-02 05:15:51] 2026-04-02 05:15:00,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-02 05:15:51] 2026-04-02 05:15:00,488 | INFO     | **************************************
[2026-04-02 05:15:51] 2026-04-02 05:15:00,490 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-02 05:15:51] 2026-04-02 05:15:00,490 | INFO     | **************************************
[2026-04-02 05:15:51] 2026-04-02 05:15:00,490 | INFO     | 
[2026-04-02 05:15:51] 2026-04-02 05:15:00,513 | INFO     | architecture information:
[2026-04-02 05:15:51] 2026-04-02 05:15:00,517 | INFO     | executing command: cat /etc/os-release
[2026-04-02 05:15:51] 2026-04-02 05:15:00,653 | INFO     | cat /etc/os-release:
[2026-04-02 05:15:51] NAME="CentOS Linux"
[2026-04-02 05:15:51] VERSION="7 (Core)"
[2026-04-02 05:15:51] ID="centos"
[2026-04-02 05:15:51] ID_LIKE="rhel fedora"
[2026-04-02 05:15:51] VERSION_ID="7"
[2026-04-02 05:15:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 05:15:51] ANSI_COLOR="0;31"
[2026-04-02 05:15:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 05:15:51] HOME_URL="https://www.centos.org/"
[2026-04-02 05:15:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 05:15:51] 
[2026-04-02 05:15:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 05:15:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 05:15:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 05:15:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 05:15:51] 
[2026-04-02 05:15:51] 2026-04-02 05:15:00,654 | INFO     | **************************************
[2026-04-02 05:15:51] 2026-04-02 05:15:01,156 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-04-02 05:15:51] 2026-04-02 05:15:01,249 | INFO     | sufficient remaining disk space (189861462016 B)
[2026-04-02 05:15:51] 2026-04-02 05:15:01,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 05:15:51] 2026-04-02 05:15:01,250 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 05:15:51] 2026-04-02 05:15:01,250 | INFO     | update_server=False
[2026-04-02 05:15:51] 2026-04-02 05:15:01,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-02 05:15:51] 2026-04-02 05:15:01,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 05:15:51] 2026-04-02 05:15:01,253 | INFO     | aborting loop
[2026-04-02 05:15:51] 2026-04-02 05:15:01,490 | INFO     | all job control threads have been joined
[2026-04-02 05:15:51] 2026-04-02 05:15:02,014 | INFO     | all data control threads have been joined
[2026-04-02 05:15:51] 2026-04-02 05:15:02,253 | INFO     | [job] retrieve thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:02,257 | INFO     | [job] job monitor thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:02,353 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:02,494 | INFO     | [job] control thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:02,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 05:15:51] 2026-04-02 05:15:02,673 | INFO     | [data] copytool_in thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:02,690 | INFO     | all payload control threads have been joined
[2026-04-02 05:15:51] 2026-04-02 05:15:02,813 | INFO     | [payload] validate_post thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:02,849 | INFO     | [job] validate thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:02,878 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:03,017 | INFO     | [data] control thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:03,493 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:03,565 | INFO     | [payload] failed_post thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:03,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 05:15:51] 2026-04-02 05:15:03,633 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:03,693 | INFO     | [payload] control thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:03,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 05:15:51] 2026-04-02 05:15:04,525 | INFO     | [data] copytool_out thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:04,637 | INFO     | [job] queue monitor thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:07,969 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 05:15:51] 2026-04-02 05:15:32,352 | INFO     | PID=2751895 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-02 05:15:51] 2026-04-02 05:15:32,352 | INFO     | .. there are 2 such processes running
[2026-04-02 05:15:51] 2026-04-02 05:15:32,354 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 05:15:51] 2026-04-02 05:15:32,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 05:15:51] 2026-04-02 05:15:32,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 05:15:51] 2026-04-02 05:15:44,049 | INFO     | [monitor] cgroup control has ended
[2026-04-02 05:15:51] 2026-04-02 05:15:45,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913514043200)>', '<ExcThread(monitor, started 139912837846784)>']
[2026-04-02 05:15:51] 2026-04-02 05:15:45,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 05:15:51] 2026-04-02 05:15:45,406 | INFO     | [monitor] control thread has ended
[2026-04-02 05:15:51] 2026-04-02 05:15:50,042 | INFO     | all workflow threads have been joined
[2026-04-02 05:15:51] 2026-04-02 05:15:50,042 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 05:15:51] 2026-04-02 05:15:50,042 | INFO     | traces error code: 0
[2026-04-02 05:15:51] 2026-04-02 05:15:50,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 05:15:51] 2026-04-02 05:15:50,485 [wrapper] ==== pilot stdout END ====
[2026-04-02 05:15:51] 2026-04-02 05:15:50,517 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 05:15:51] 2026-04-02 05:15:50,538 [wrapper] pilotpid: 2751895
[2026-04-02 05:15:51] 2026-04-02 05:15:50,546 [wrapper] Pilot exit status: 0
[2026-04-02 05:15:51] 2026-04-02 05:15:50,597 [wrapper] pandaids: 7071836988
[2026-04-02 05:15:51] 2026-04-02 05:15:50,716 [wrapper] cleanup supervisor_pilot 2777746 2751896
[2026-04-02 05:15:51] 2026-04-02 05:15:50,728 [wrapper] Test setup, not cleaning
[2026-04-02 05:15:51] 2026-04-02 05:15:50,742 [wrapper] apfmon messages muted
[2026-04-02 05:15:51] 2026-04-02 05:15:50,755 [wrapper] ==== wrapper stdout END ====
[2026-04-02 05:15:51] 2026-04-02 05:15:50,769 [wrapper] ==== wrapper stderr END ====
[2026-04-02 05:15:51]  *** Error codes and diagnostics ***
[2026-04-02 05:15:51]     "exeErrorCode": 0,
[2026-04-02 05:15:51]     "exeErrorDiag": "",
[2026-04-02 05:15:51]     "pilotErrorCode": 0,
[2026-04-02 05:15:51]     "pilotErrorDiag": "",
[2026-04-02 05:15:51]  *** Listing of results directory ***
[2026-04-02 05:15:51] total 482076
[2026-04-02 05:15:51] -rwx------ 1 boinc boinc     36322 Mar 28 01:14 runpilot2-wrapper.sh
[2026-04-02 05:15:51] -rw-r--r-- 1 boinc boinc    585013 Mar 28 01:55 pilot3.tar.gz
[2026-04-02 05:15:51] -rw-r--r-- 1 boinc boinc      5118 Mar 28 02:11 queuedata.json
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc       100 Apr  1 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 05:15:51] -rwxr-xr-x 1 boinc boinc      7986 Apr  1 19:00 run_atlas
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc       105 Apr  1 19:00 job.xml
[2026-04-02 05:15:51] -rw-r--r-- 2 boinc boinc 244377242 Apr  1 19:00 EVNT.49133672._000006.pool.root.1
[2026-04-02 05:15:51] drwxrwx--x 2 boinc boinc      4096 Apr  1 19:00 shared
[2026-04-02 05:15:51] -rw-r--r-- 2 boinc boinc    597567 Apr  1 19:00 input.tar.gz
[2026-04-02 05:15:51] -rw-r--r-- 2 boinc boinc     15845 Apr  1 19:00 start_atlas.sh
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc      9478 Apr  1 19:00 init_data.xml
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc         0 Apr  1 19:00 boinc_setup_complete
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc         0 Apr  1 19:00 boinc_lockfile
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc      2629 Apr  1 19:00 pandaJob.out
[2026-04-02 05:15:51] -rw------- 1 boinc boinc   1005501 Apr  1 19:02 agis_schedconf.cvmfs.json
[2026-04-02 05:15:51] -rw------- 1 boinc boinc       419 Apr  1 19:02 workernode_map.json
[2026-04-02 05:15:51] drwx------ 5 boinc boinc      4096 Apr  1 19:02 pilot3
[2026-04-02 05:15:51] -rw------- 1 boinc boinc 233160238 Apr  2 05:13 HITS.49176362._000396.pool.root.1
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc       530 Apr  2 05:13 boinc_task_state.xml
[2026-04-02 05:15:51] -rw------- 1 boinc boinc      1023 Apr  2 05:14 memory_monitor_summary.json
[2026-04-02 05:15:51] -rw------- 1 boinc boinc   1511579 Apr  2 05:14 agis_ddmendpoints.agis.ALL.json
[2026-04-02 05:15:51] -rw------- 1 boinc boinc    838608 Apr  2 05:14 log.49176362._000396.job.log.tgz.1
[2026-04-02 05:15:51] -rw------- 1 boinc boinc      6309 Apr  2 05:14 heartbeat.json
[2026-04-02 05:15:51] -rw------- 1 boinc boinc        95 Apr  2 05:15 pilot_heartbeat.json
[2026-04-02 05:15:51] -rw------- 1 boinc boinc      4843 Apr  2 05:15 pilotlog.txt
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc        28 Apr  2 05:15 wrapper_checkpoint.txt
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc      8192 Apr  2 05:15 boinc_mmap_file
[2026-04-02 05:15:51] -rw------- 1 boinc boinc   5243164 Apr  2 05:15 log.49176362._000396.job.log.1
[2026-04-02 05:15:51] -rw------- 1 boinc boinc       357 Apr  2 05:15 output.list
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc       620 Apr  2 05:15 runtime_log
[2026-04-02 05:15:51] -rw------- 1 boinc boinc   6103040 Apr  2 05:15 result.tar.gz
[2026-04-02 05:15:51] -rw------- 1 boinc boinc       653 Apr  2 05:15 sGbNDmiQXQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm29FKDmkfExqm.diag
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc      9160 Apr  2 05:15 runtime_log.err
[2026-04-02 05:15:51] -rw-rw-r-- 1 boinc boinc     20855 Apr  2 05:15 stderr.txt
[2026-04-02 05:15:51] HITS file was successfully produced:
[2026-04-02 05:15:51] -rw------- 1 boinc boinc 233160238 Apr  2 05:13 shared/HITS.pool.root.1
[2026-04-02 05:15:51]  *** Contents of shared directory: ***
[2026-04-02 05:15:51] total 472916
[2026-04-02 05:15:51] -rw-r--r-- 2 boinc boinc 244377242 Apr  1 19:00 ATLAS.root_0
[2026-04-02 05:15:51] -rw-r--r-- 2 boinc boinc    597567 Apr  1 19:00 input.tar.gz
[2026-04-02 05:15:51] -rw-r--r-- 2 boinc boinc     15845 Apr  1 19:00 start_atlas.sh
[2026-04-02 05:15:51] -rw------- 1 boinc boinc 233160238 Apr  2 05:13 HITS.pool.root.1
[2026-04-02 05:15:51] -rw------- 1 boinc boinc   6103040 Apr  2 05:15 result.tar.gz
05:15:53 (2747885): run_atlas exited; CPU time 73838.908211
05:15:53 (2747885): called boinc_finish(0)

</stderr_txt>
]]>

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