Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:29:03 (2558): wrapper (7.7.26015): starting
20:29:03 (2558): wrapper: running run_atlas (--nthreads 8)
[2026-03-28 20:29:03] Arguments: --nthreads 8
[2026-03-28 20:29:03] Threads: 8
[2026-03-28 20:29:03] Checking for CVMFS
[2026-03-28 20:29:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 20:29:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 20:29:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 20:29:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 20:29:04] 2.11.2.0 17366 148138 134524 157814 1 196 18333274 25165825 4152 130560 154 46970011 99.835 30746880 1064 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-28 20:29:04] CVMFS is ok
[2026-03-28 20:29:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 20:29:04] Checking for apptainer binary...
[2026-03-28 20:29:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-28 20:29:04] Running /usr/bin/apptainer --version
[2026-03-28 20:29:04] apptainer version 1.3.2-1.el7
[2026-03-28 20:29:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 20:29:05] cg-vwn463.simple-grid.lan
[2026-03-28 20:29:05] apptainer works
[2026-03-28 20:29:05] Set ATHENA_PROC_NUMBER=8
[2026-03-28 20:29:05] Set ATHENA_CORE_NUMBER=8
[2026-03-28 20:29:06] Starting ATLAS job with PandaID=7071836959
[2026-03-28 20:29:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 07:09:53]  *** The last 200 lines of the pilot log: ***
[2026-03-29 07:09:53] 2026-03-29 05:08:50,347 | INFO     | total number of processed events: 400 (read)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,349 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7071836959/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,350 | INFO     | extracted standard info from prmon json
[2026-03-29 07:09:53] 2026-03-29 05:08:50,350 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 07:09:53] 2026-03-29 05:08:50,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 07:09:53] 2026-03-29 05:08:50,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 07:09:53] 2026-03-29 05:08:50,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 07:09:53] 2026-03-29 05:08:50,361 | INFO     | fitting pss+swap vs Time
[2026-03-29 07:09:53] 2026-03-29 05:08:50,365 | INFO     | sum of square deviations: 57123378020.0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,378 | INFO     | sum of deviations: 37498899293.99997
[2026-03-29 07:09:53] 2026-03-29 05:08:50,379 | INFO     | mean x: 1774743561.0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,379 | INFO     | mean y: 2518005.7732864674
[2026-03-29 07:09:53] 2026-03-29 05:08:50,379 | INFO     | intersect: -1162520414.106454
[2026-03-29 07:09:53] 2026-03-29 05:08:50,380 | INFO     | chi2: 2.479782984696079
[2026-03-29 07:09:53] 2026-03-29 05:08:50,381 | INFO     | sum of square deviations: 55630680265.0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,391 | INFO     | sum of deviations: 74945921747.99998
[2026-03-29 07:09:53] 2026-03-29 05:08:50,391 | INFO     | mean x: 1774743408.5
[2026-03-29 07:09:53] 2026-03-29 05:08:50,391 | INFO     | mean y: 2521803.7730496456
[2026-03-29 07:09:53] 2026-03-29 05:08:50,391 | INFO     | intersect: -2388421107.272077
[2026-03-29 07:09:53] 2026-03-29 05:08:50,392 | INFO     | chi2: 1.7101396274080114
[2026-03-29 07:09:53] 2026-03-29 05:08:50,392 | INFO     | current chi2=1.7101396274080114 (change=31.03672224698303 %)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,393 | INFO     | sum of square deviations: 54164215560.0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,405 | INFO     | sum of deviations: 73710669674.0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,406 | INFO     | mean x: 1774743256.0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,410 | INFO     | mean y: 2521675.314847943
[2026-03-29 07:09:53] 2026-03-29 05:08:50,410 | INFO     | intersect: -2412680179.7598023
[2026-03-29 07:09:53] 2026-03-29 05:08:50,411 | INFO     | chi2: 1.7102872928205157
[2026-03-29 07:09:53] 2026-03-29 05:08:50,411 | INFO     | current chi2=1.7102872928205157 (change=-0.008634699186997845 %)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,411 | INFO     | right removable region: 558
[2026-03-29 07:09:53] 2026-03-29 05:08:50,412 | INFO     | sum of square deviations: 55630680265.0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,422 | INFO     | monitor loop #2513: job 0:7071836959 is in state 'finished'
[2026-03-29 07:09:53] 2026-03-29 05:08:50,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,430 | INFO     | sum of deviations: -53737023989.50001
[2026-03-29 07:09:53] 2026-03-29 05:08:50,430 | INFO     | mean x: 1774743713.5
[2026-03-29 07:09:53] 2026-03-29 05:08:50,430 | INFO     | mean y: 2527290.4875886524
[2026-03-29 07:09:53] 2026-03-29 05:08:50,430 | INFO     | intersect: 1716859113.3821838
[2026-03-29 07:09:53] 2026-03-29 05:08:50,431 | INFO     | chi2: 0.9829066994120166
[2026-03-29 07:09:53] 2026-03-29 05:08:50,431 | INFO     | current chi2=0.9829066994120166 (change=60.36319688142061 %)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,432 | INFO     | sum of square deviations: 54164215560.0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,449 | INFO     | sum of deviations: -63205056121.000015
[2026-03-29 07:09:53] 2026-03-29 05:08:50,449 | INFO     | mean x: 1774743866.0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,450 | INFO     | mean y: 2528275.0196779966
[2026-03-29 07:09:53] 2026-03-29 05:08:50,450 | INFO     | intersect: 2073504185.7973752
[2026-03-29 07:09:53] 2026-03-29 05:08:50,451 | INFO     | chi2: 0.97090451617409
[2026-03-29 07:09:53] 2026-03-29 05:08:50,451 | INFO     | current chi2=0.97090451617409 (change=1.2210907958106683 %)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,451 | INFO     | left removable region: 20
[2026-03-29 07:09:53] 2026-03-29 05:08:50,452 | INFO     | sum of square deviations: 48286280234.5
[2026-03-29 07:09:53] 2026-03-29 05:08:50,460 | INFO     | sum of deviations: -4654902710.5
[2026-03-29 07:09:53] 2026-03-29 05:08:50,461 | INFO     | mean x: 1774743835.5
[2026-03-29 07:09:53] 2026-03-29 05:08:50,461 | INFO     | mean y: 2529807.1059479555
[2026-03-29 07:09:53] 2026-03-29 05:08:50,461 | INFO     | intersect: 173618982.9586271
[2026-03-29 07:09:53] 2026-03-29 05:08:50,462 | INFO     | chi2: 0.14767770654385318
[2026-03-29 07:09:53] 2026-03-29 05:08:50,462 | INFO     | current memory leak: -0.10 B/s (using 538 data points, chi2=0.15)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,463 | INFO     | could have reported an average CPU frequency of 2250 MHz (23 samples)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,463 | INFO     | ..............................
[2026-03-29 07:09:53] 2026-03-29 05:08:50,464 | INFO     | . Timing measurements:
[2026-03-29 07:09:53] 2026-03-29 05:08:50,464 | INFO     | . get job = 0 s
[2026-03-29 07:09:53] 2026-03-29 05:08:50,464 | INFO     | . initial setup = 11 s
[2026-03-29 07:09:53] 2026-03-29 05:08:50,464 | INFO     | . payload setup = 27 s
[2026-03-29 07:09:53] 2026-03-29 05:08:50,464 | INFO     | . stage-in = 0 s
[2026-03-29 07:09:53] 2026-03-29 05:08:50,464 | INFO     | . payload execution = 34705 s
[2026-03-29 07:09:53] 2026-03-29 05:08:50,464 | INFO     | . stage-out = 3 s
[2026-03-29 07:09:53] 2026-03-29 05:08:50,464 | INFO     | . log creation = 1 s
[2026-03-29 07:09:53] 2026-03-29 05:08:50,464 | INFO     | ..............................
[2026-03-29 07:09:53] 2026-03-29 05:08:50,604 | INFO     | 
[2026-03-29 07:09:53] 2026-03-29 05:08:50,604 | INFO     | job summary report
[2026-03-29 07:09:53] 2026-03-29 05:08:50,604 | INFO     | --------------------------------------------------
[2026-03-29 07:09:53] 2026-03-29 05:08:50,604 | INFO     | PanDA job id: 7071836959
[2026-03-29 07:09:53] 2026-03-29 05:08:50,604 | INFO     | task id: 49176362
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | errors: (none)
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | pilot state: finished 
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | transexitcode: 0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | exeerrorcode: 0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | exeerrordiag: 
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | exitcode: 0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | exitmsg: OK
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | cpuconsumptiontime: 135326 s
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | nevents: 400
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | neventsw: 0
[2026-03-29 07:09:53] 2026-03-29 05:08:50,605 | INFO     | pid: 14966
[2026-03-29 07:09:53] 2026-03-29 05:08:50,606 | INFO     | pgrp: 14966
[2026-03-29 07:09:53] 2026-03-29 05:08:50,606 | INFO     | corecount: 8
[2026-03-29 07:09:53] 2026-03-29 05:08:50,606 | INFO     | event service: False
[2026-03-29 07:09:53] 2026-03-29 05:08:50,606 | INFO     | sizes: {0: 2280268, 1: 2280268, 34737: 2320148, 34740: 2329148, 34744: 2329204, 34747: 2329398}
[2026-03-29 07:09:53] 2026-03-29 05:08:50,606 | INFO     | --------------------------------------------------
[2026-03-29 07:09:53] 2026-03-29 05:08:50,606 | INFO     | 
[2026-03-29 07:09:53] 2026-03-29 05:08:50,606 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-29 07:09:53] 2026-03-29 05:08:51,249 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,250 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,250 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,250 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,251 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 07:09:53] 2026-03-29 05:08:51,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,252 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 07:09:53] 2026-03-29 05:08:51,252 | INFO     | job 7071836959 has completed (purged errors)
[2026-03-29 07:09:53] 2026-03-29 05:08:51,252 | INFO     | overall cleanup function is called
[2026-03-29 07:09:53] 2026-03-29 05:08:52,261 | INFO     | --- collectZombieJob: --- 10, [14966]
[2026-03-29 07:09:53] 2026-03-29 05:08:52,261 | INFO     | zombie collector waiting for pid 14966
[2026-03-29 07:09:53] 2026-03-29 05:08:52,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 07:09:53] 2026-03-29 05:08:52,261 | INFO     | collected zombie processes
[2026-03-29 07:09:53] 2026-03-29 05:08:52,261 | INFO     | will attempt to kill all subprocesses of pid=14966
[2026-03-29 07:09:53] 2026-03-29 05:08:52,406 | INFO     | process IDs to be killed: [14966] (in reverse order)
[2026-03-29 07:09:53] 2026-03-29 05:08:53,470 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 07:09:53] 2026-03-29 05:08:53,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 07:09:53] 2026-03-29 05:08:53,473 | INFO     | did not find any defunct processes belonging to 14966
[2026-03-29 07:09:53] 2026-03-29 05:08:53,477 | INFO     | did not find any defunct processes belonging to 14966
[2026-03-29 07:09:53] 2026-03-29 05:08:53,477 | INFO     | ready for new job
[2026-03-29 07:09:53] 2026-03-29 05:08:53,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 07:09:53] 2026-03-29 05:08:53,480 | INFO     | **************************************
[2026-03-29 07:09:53] 2026-03-29 05:08:53,481 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 07:09:53] 2026-03-29 05:08:53,481 | INFO     | **************************************
[2026-03-29 07:09:53] 2026-03-29 05:08:53,481 | INFO     | 
[2026-03-29 07:09:53] 2026-03-29 05:08:53,482 | INFO     | pilot is running in a VM
[2026-03-29 07:09:53] 2026-03-29 05:08:53,482 | INFO     | architecture information:
[2026-03-29 07:09:53] 2026-03-29 05:08:53,490 | INFO     | executing command: cat /etc/os-release
[2026-03-29 07:09:53] 2026-03-29 05:08:53,586 | INFO     | cat /etc/os-release:
[2026-03-29 07:09:53] NAME="CentOS Linux"
[2026-03-29 07:09:53] VERSION="7 (Core)"
[2026-03-29 07:09:53] ID="centos"
[2026-03-29 07:09:53] ID_LIKE="rhel fedora"
[2026-03-29 07:09:53] VERSION_ID="7"
[2026-03-29 07:09:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 07:09:53] ANSI_COLOR="0;31"
[2026-03-29 07:09:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 07:09:53] HOME_URL="https://www.centos.org/"
[2026-03-29 07:09:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 07:09:53] 
[2026-03-29 07:09:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 07:09:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 07:09:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 07:09:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 07:09:53] 
[2026-03-29 07:09:53] 2026-03-29 05:08:53,586 | INFO     | **************************************
[2026-03-29 07:09:53] 2026-03-29 05:08:54,090 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-29 07:09:53] 2026-03-29 05:08:54,326 | INFO     | sufficient remaining disk space (496501784576 B)
[2026-03-29 07:09:53] 2026-03-29 05:08:54,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 07:09:53] 2026-03-29 05:08:54,326 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 07:09:53] 2026-03-29 05:08:54,326 | INFO     | update_server=False
[2026-03-29 07:09:53] 2026-03-29 05:08:54,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 07:09:53] 2026-03-29 05:08:54,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 07:09:53] 2026-03-29 05:08:54,327 | INFO     | aborting loop
[2026-03-29 07:09:53] 2026-03-29 05:08:54,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 07:09:53] 2026-03-29 05:08:54,637 | INFO     | all payload control threads have been joined
[2026-03-29 07:09:53] 2026-03-29 05:08:54,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 07:09:53] 2026-03-29 05:08:55,118 | INFO     | all data control threads have been joined
[2026-03-29 07:09:53] 2026-03-29 05:08:55,246 | INFO     | all job control threads have been joined
[2026-03-29 07:09:53] 2026-03-29 05:08:55,332 | INFO     | [job] retrieve thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:55,333 | INFO     | [job] job monitor thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:55,442 | INFO     | [job] validate thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:55,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 07:09:53] 2026-03-29 05:08:55,643 | INFO     | [payload] control thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:55,822 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:55,837 | INFO     | [data] copytool_in thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:55,847 | INFO     | [payload] failed_post thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:56,123 | INFO     | [data] control thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:56,252 | INFO     | [job] control thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:56,354 | INFO     | [payload] validate_post thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:56,437 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:56,480 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:56,625 | INFO     | [job] queue monitor thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:56,660 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:56,838 | INFO     | [data] copytool_out thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:08:58,342 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 07:09:53] 2026-03-29 05:09:23,148 | INFO     | PID=6547 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-29 07:09:53] 2026-03-29 05:09:23,149 | INFO     | .. there are 9 such processes running
[2026-03-29 07:09:53] 2026-03-29 05:09:23,149 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 07:09:53] 2026-03-29 05:09:23,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 07:09:53] 2026-03-29 05:09:23,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 07:09:53] 2026-03-29 05:09:42,348 | INFO     | [monitor] cgroup control has ended
[2026-03-29 07:09:53] 2026-03-29 05:09:43,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140363819509568)>', '<ExcThread(monitor, started 140363088000768)>']
[2026-03-29 07:09:53] 2026-03-29 05:09:44,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 07:09:53] 2026-03-29 05:09:44,273 | INFO     | [monitor] control thread has ended
[2026-03-29 07:09:53] 2026-03-29 05:09:48,380 | INFO     | all workflow threads have been joined
[2026-03-29 07:09:53] 2026-03-29 05:09:48,380 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 07:09:53] 2026-03-29 05:09:48,380 | INFO     | traces error code: 0
[2026-03-29 07:09:53] 2026-03-29 05:09:48,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 07:09:53] 2026-03-29 05:09:48,692 [wrapper] ==== pilot stdout END ====
[2026-03-29 07:09:53] 2026-03-29 05:09:48,730 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 07:09:53] 2026-03-29 05:09:48,787 [wrapper] pilotpid: 6547
[2026-03-29 07:09:53] 2026-03-29 05:09:48,892 [wrapper] Pilot exit status: 0
[2026-03-29 07:09:53] 2026-03-29 05:09:49,321 [wrapper] pandaids: 7071836959
[2026-03-29 07:09:53] 2026-03-29 05:09:50,616 [wrapper] cleanup supervisor_pilot 15529 6548
[2026-03-29 07:09:53] 2026-03-29 05:09:50,736 [wrapper] Test setup, not cleaning
[2026-03-29 07:09:53] 2026-03-29 05:09:50,841 [wrapper] apfmon messages muted
[2026-03-29 07:09:53] 2026-03-29 05:09:50,941 [wrapper] ==== wrapper stdout END ====
[2026-03-29 07:09:53] 2026-03-29 05:09:51,070 [wrapper] ==== wrapper stderr END ====
[2026-03-29 07:09:53]  *** Error codes and diagnostics ***
[2026-03-29 07:09:53]     "exeErrorCode": 0,
[2026-03-29 07:09:53]     "exeErrorDiag": "",
[2026-03-29 07:09:53]     "pilotErrorCode": 0,
[2026-03-29 07:09:53]     "pilotErrorDiag": "",
[2026-03-29 07:09:53]  *** Listing of results directory ***
[2026-03-29 07:09:53] total 480568
[2026-03-29 07:09:53] -rwx------. 1 boinc boinc     36322 Mar 28 02:12 runpilot2-wrapper.sh
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc    585013 Mar 28 02:55 pilot3.tar.gz
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc      5118 Mar 28 03:10 queuedata.json
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc       100 Mar 28 20:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 07:09:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar 28 20:29 run_atlas
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc       105 Mar 28 20:29 job.xml
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc      6391 Mar 28 20:29 init_data.xml
[2026-03-29 07:09:53] -rw-r--r--. 2 boinc boinc 241608628 Mar 28 20:29 EVNT.49133672._000005.pool.root.1
[2026-03-29 07:09:53] -rw-r--r--. 2 boinc boinc     15845 Mar 28 20:29 start_atlas.sh
[2026-03-29 07:09:53] drwxrwx--x. 2 boinc boinc        68 Mar 28 20:29 shared
[2026-03-29 07:09:53] -rw-r--r--. 2 boinc boinc    597561 Mar 28 20:29 input.tar.gz
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc         0 Mar 28 20:29 boinc_lockfile
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc      2628 Mar 28 20:29 pandaJob.out
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc   1003389 Mar 28 20:29 agis_schedconf.cvmfs.json
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc       413 Mar 28 20:29 workernode_map.json
[2026-03-29 07:09:53] drwx------. 5 boinc boinc      4096 Mar 28 20:29 pilot3
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc 235546855 Mar 29 07:07 HITS.49176362._000367.pool.root.1
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc       531 Mar 29 07:07 boinc_task_state.xml
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc        95 Mar 29 07:08 pilot_heartbeat.json
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc      1017 Mar 29 07:08 memory_monitor_summary.json
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc   1511579 Mar 29 07:08 agis_ddmendpoints.agis.ALL.json
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc    745876 Mar 29 07:08 log.49176362._000367.job.log.tgz.1
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc      6311 Mar 29 07:08 heartbeat.json
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc      8192 Mar 29 07:09 boinc_mmap_file
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc        29 Mar 29 07:09 wrapper_checkpoint.txt
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc      4880 Mar 29 07:09 pilotlog.txt
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc   4770008 Mar 29 07:09 log.49176362._000367.job.log.1
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc       357 Mar 29 07:09 output.list
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc       620 Mar 29 07:09 runtime_log
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc   5529600 Mar 29 07:09 result.tar.gz
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc      8832 Mar 29 07:09 runtime_log.err
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc       658 Mar 29 07:09 cT4MDmmOXQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmg5FKDmmmC1Ho.diag
[2026-03-29 07:09:53] -rw-r--r--. 1 boinc boinc     20739 Mar 29 07:09 stderr.txt
[2026-03-29 07:09:53] HITS file was successfully produced:
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc 235546855 Mar 29 07:07 shared/HITS.pool.root.1
[2026-03-29 07:09:53]  *** Contents of shared directory: ***
[2026-03-29 07:09:53] total 471976
[2026-03-29 07:09:53] -rw-r--r--. 2 boinc boinc 241608628 Mar 28 20:29 ATLAS.root_0
[2026-03-29 07:09:53] -rw-r--r--. 2 boinc boinc     15845 Mar 28 20:29 start_atlas.sh
[2026-03-29 07:09:53] -rw-r--r--. 2 boinc boinc    597561 Mar 28 20:29 input.tar.gz
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc 235546855 Mar 29 07:07 HITS.pool.root.1
[2026-03-29 07:09:53] -rw-------. 1 boinc boinc   5529600 Mar 29 07:09 result.tar.gz
07:09:54 (2558): run_atlas exited; CPU time 135869.512579
07:09:54 (2558): called boinc_finish(0)

</stderr_txt>
]]>

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