Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:07:07 (14544): wrapper (7.7.26015): starting
07:07:07 (14544): wrapper: running run_atlas (--nthreads 8)
[2026-03-28 07:07:07] Arguments: --nthreads 8
[2026-03-28 07:07:07] Threads: 8
[2026-03-28 07:07:07] Checking for CVMFS
[2026-03-28 07:07:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 07:07:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 07:07:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 07:07:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 07:07:08] 2.11.2.0 9107 147353 137064 157789 1 256 16963023 25165825 4052 130560 145 44229131 99.822 35457679 1168 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-28 07:07:08] CVMFS is ok
[2026-03-28 07:07:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 07:07:08] Checking for apptainer binary...
[2026-03-28 07:07:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-28 07:07:08] Running /usr/bin/apptainer --version
[2026-03-28 07:07:08] apptainer version 1.3.2-1.el7
[2026-03-28 07:07:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 07:07:09] cg-vwn398.simple-grid.lan
[2026-03-28 07:07:09] apptainer works
[2026-03-28 07:07:09] Set ATHENA_PROC_NUMBER=8
[2026-03-28 07:07:09] Set ATHENA_CORE_NUMBER=8
[2026-03-28 07:07:09] Starting ATLAS job with PandaID=7063611704
[2026-03-28 07:07:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-28 12:28:33]  *** The last 200 lines of the pilot log: ***
[2026-03-28 12:28:33] 2026-03-28 11:27:41,613 | INFO     | job 7063611704 has finished - writing final server update
[2026-03-28 12:28:33] 2026-03-28 11:27:41,614 | INFO     | total number of processed events: 400 (read)
[2026-03-28 12:28:33] 2026-03-28 11:27:41,616 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7063611704/memory_monitor_summary.json (trf name=prmon)
[2026-03-28 12:28:33] 2026-03-28 11:27:41,616 | INFO     | extracted standard info from prmon json
[2026-03-28 12:28:33] 2026-03-28 11:27:41,616 | INFO     | extracted standard memory fields from prmon json
[2026-03-28 12:28:33] 2026-03-28 11:27:41,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-28 12:28:33] 2026-03-28 11:27:41,617 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-28 12:28:33] 2026-03-28 11:27:41,617 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-28 12:28:33] 2026-03-28 11:27:41,623 | INFO     | fitting pss+swap vs Time
[2026-03-28 12:28:33] 2026-03-28 11:27:41,624 | INFO     | sum of square deviations: 9599817202.5
[2026-03-28 12:28:33] 2026-03-28 11:27:41,631 | INFO     | sum of deviations: 41599950796.499985
[2026-03-28 12:28:33] 2026-03-28 11:27:41,632 | INFO     | mean x: 1774687648.5
[2026-03-28 12:28:33] 2026-03-28 11:27:41,632 | INFO     | mean y: 2480849.200636943
[2026-03-28 12:28:33] 2026-03-28 11:27:41,632 | INFO     | intersect: -7687969635.370062
[2026-03-28 12:28:33] 2026-03-28 11:27:41,632 | INFO     | chi2: 2.302283514796441
[2026-03-28 12:28:33] 2026-03-28 11:27:41,633 | INFO     | sum of square deviations: 9148487810.0
[2026-03-28 12:28:33] 2026-03-28 11:27:41,636 | INFO     | sum of deviations: 61462051088.0
[2026-03-28 12:28:33] 2026-03-28 11:27:41,637 | INFO     | mean x: 1774687496.0
[2026-03-28 12:28:33] 2026-03-28 11:27:41,637 | INFO     | mean y: 2487469.2944983817
[2026-03-28 12:28:33] 2026-03-28 11:27:41,637 | INFO     | intersect: -11920350032.34795
[2026-03-28 12:28:33] 2026-03-28 11:27:41,637 | INFO     | chi2: 1.5269148944228463
[2026-03-28 12:28:33] 2026-03-28 11:27:41,638 | INFO     | current chi2=1.5269148944228463 (change=33.678242292507136 %)
[2026-03-28 12:28:33] 2026-03-28 11:27:41,638 | INFO     | sum of square deviations: 8711530780.0
[2026-03-28 12:28:33] 2026-03-28 11:27:41,641 | INFO     | sum of deviations: 60178867928.50001
[2026-03-28 12:28:33] 2026-03-28 11:27:41,641 | INFO     | mean x: 1774687343.5
[2026-03-28 12:28:33] 2026-03-28 11:27:41,642 | INFO     | mean y: 2487021.5822368423
[2026-03-28 12:28:33] 2026-03-28 11:27:41,642 | INFO     | intersect: -12256974369.98585
[2026-03-28 12:28:33] 2026-03-28 11:27:41,642 | INFO     | chi2: 1.5271937755973481
[2026-03-28 12:28:33] 2026-03-28 11:27:41,642 | INFO     | current chi2=1.5271937755973481 (change=-0.018264356155044507 %)
[2026-03-28 12:28:33] 2026-03-28 11:27:41,643 | INFO     | right removable region: 303
[2026-03-28 12:28:33] 2026-03-28 11:27:41,643 | INFO     | sum of square deviations: 9148487810.0
[2026-03-28 12:28:33] 2026-03-28 11:27:41,646 | INFO     | sum of deviations: -5258294793.999996
[2026-03-28 12:28:33] 2026-03-28 11:27:41,646 | INFO     | mean x: 1774687801.0
[2026-03-28 12:28:33] 2026-03-28 11:27:41,647 | INFO     | mean y: 2496562.4563106797
[2026-03-28 12:28:33] 2026-03-28 11:27:41,647 | INFO     | intersect: 1022537449.9539353
[2026-03-28 12:28:33] 2026-03-28 11:27:41,647 | INFO     | chi2: 0.8897199010085233
[2026-03-28 12:28:33] 2026-03-28 11:27:41,647 | INFO     | current chi2=0.8897199010085233 (change=61.35489416093096 %)
[2026-03-28 12:28:33] 2026-03-28 11:27:41,648 | INFO     | sum of square deviations: 8711530780.0
[2026-03-28 12:28:33] 2026-03-28 11:27:41,651 | INFO     | sum of deviations: -20201650538.999996
[2026-03-28 12:28:33] 2026-03-28 11:27:41,651 | INFO     | mean x: 1774687953.5
[2026-03-28 12:28:33] 2026-03-28 11:27:41,651 | INFO     | mean y: 2501763.7171052634
[2026-03-28 12:28:33] 2026-03-28 11:27:41,651 | INFO     | intersect: 4117923812.697121
[2026-03-28 12:28:33] 2026-03-28 11:27:41,652 | INFO     | chi2: 0.7940801802085564
[2026-03-28 12:28:33] 2026-03-28 11:27:41,652 | INFO     | current chi2=0.7940801802085564 (change=10.749419080269696 %)
[2026-03-28 12:28:33] 2026-03-28 11:27:41,652 | INFO     | left removable region: 20
[2026-03-28 12:28:33] 2026-03-28 11:27:41,653 | INFO     | sum of square deviations: 7028008982.0
[2026-03-28 12:28:33] 2026-03-28 11:27:41,655 | INFO     | sum of deviations: -2000274180.000001
[2026-03-28 12:28:33] 2026-03-28 11:27:41,655 | INFO     | mean x: 1774687923.0
[2026-03-28 12:28:33] 2026-03-28 11:27:41,656 | INFO     | mean y: 2509482.3498233217
[2026-03-28 12:28:33] 2026-03-28 11:27:41,656 | INFO     | intersect: 507611629.9177289
[2026-03-28 12:28:33] 2026-03-28 11:27:41,656 | INFO     | chi2: 0.004655123870475754
[2026-03-28 12:28:33] 2026-03-28 11:27:41,656 | INFO     | current memory leak: -0.28 B/s (using 283 data points, chi2=0.00)
[2026-03-28 12:28:33] 2026-03-28 11:27:41,657 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-28 12:28:33] 2026-03-28 11:27:41,657 | INFO     | ..............................
[2026-03-28 12:28:33] 2026-03-28 11:27:41,657 | INFO     | . Timing measurements:
[2026-03-28 12:28:33] 2026-03-28 11:27:41,657 | INFO     | . get job = 0 s
[2026-03-28 12:28:33] 2026-03-28 11:27:41,657 | INFO     | . initial setup = 12 s
[2026-03-28 12:28:33] 2026-03-28 11:27:41,658 | INFO     | . payload setup = 16 s
[2026-03-28 12:28:33] 2026-03-28 11:27:41,658 | INFO     | . stage-in = 0 s
[2026-03-28 12:28:33] 2026-03-28 11:27:41,658 | INFO     | . payload execution = 19159 s
[2026-03-28 12:28:33] 2026-03-28 11:27:41,658 | INFO     | . stage-out = 5 s
[2026-03-28 12:28:33] 2026-03-28 11:27:41,658 | INFO     | . log creation = 1 s
[2026-03-28 12:28:33] 2026-03-28 11:27:41,658 | INFO     | ..............................
[2026-03-28 12:28:33] 2026-03-28 11:27:41,997 | INFO     | time since job start (19190s) is within the limit (345600.0s)
[2026-03-28 12:28:33] 2026-03-28 11:27:42,071 | INFO     | 
[2026-03-28 12:28:33] 2026-03-28 11:27:42,071 | INFO     | job summary report
[2026-03-28 12:28:33] 2026-03-28 11:27:42,071 | INFO     | --------------------------------------------------
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | PanDA job id: 7063611704
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | task id: 48967094
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | errors: (none)
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | pilot state: finished 
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | transexitcode: 0
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | exeerrorcode: 0
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | exeerrordiag: 
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | exitcode: 0
[2026-03-28 12:28:33] 2026-03-28 11:27:42,072 | INFO     | exitmsg: OK
[2026-03-28 12:28:33] 2026-03-28 11:27:42,073 | INFO     | cpuconsumptiontime: 75528 s
[2026-03-28 12:28:33] 2026-03-28 11:27:42,073 | INFO     | nevents: 400
[2026-03-28 12:28:33] 2026-03-28 11:27:42,073 | INFO     | neventsw: 0
[2026-03-28 12:28:33] 2026-03-28 11:27:42,073 | INFO     | pid: 22768
[2026-03-28 12:28:33] 2026-03-28 11:27:42,073 | INFO     | pgrp: 22768
[2026-03-28 12:28:33] 2026-03-28 11:27:42,073 | INFO     | corecount: 8
[2026-03-28 12:28:33] 2026-03-28 11:27:42,073 | INFO     | event service: False
[2026-03-28 12:28:33] 2026-03-28 11:27:42,073 | INFO     | sizes: {0: 2279798, 1: 2280259, 19179: 2312838, 19180: 2312837, 19185: 2321893, 19187: 2321949, 19189: 2322271}
[2026-03-28 12:28:33] 2026-03-28 11:27:42,073 | INFO     | --------------------------------------------------
[2026-03-28 12:28:33] 2026-03-28 11:27:42,074 | INFO     | 
[2026-03-28 12:28:33] 2026-03-28 11:27:42,074 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-28 12:28:33] 2026-03-28 11:27:42,449 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,449 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,449 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,449 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,449 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,449 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,450 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,451 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-28 12:28:33] 2026-03-28 11:27:42,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,451 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-28 12:28:33] 2026-03-28 11:27:42,451 | INFO     | job 7063611704 has completed (purged errors)
[2026-03-28 12:28:33] 2026-03-28 11:27:42,451 | INFO     | overall cleanup function is called
[2026-03-28 12:28:33] 2026-03-28 11:27:43,460 | INFO     | --- collectZombieJob: --- 10, [22768]
[2026-03-28 12:28:33] 2026-03-28 11:27:43,460 | INFO     | zombie collector waiting for pid 22768
[2026-03-28 12:28:33] 2026-03-28 11:27:43,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-28 12:28:33] 2026-03-28 11:27:43,461 | INFO     | collected zombie processes
[2026-03-28 12:28:33] 2026-03-28 11:27:43,461 | INFO     | will attempt to kill all subprocesses of pid=22768
[2026-03-28 12:28:33] 2026-03-28 11:27:43,567 | INFO     | process IDs to be killed: [22768] (in reverse order)
[2026-03-28 12:28:33] 2026-03-28 11:27:43,630 | WARNING  | found no corresponding commands to process id(s)
[2026-03-28 12:28:33] 2026-03-28 11:27:43,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-28 12:28:33] 2026-03-28 11:27:43,634 | INFO     | did not find any defunct processes belonging to 22768
[2026-03-28 12:28:33] 2026-03-28 11:27:43,637 | INFO     | did not find any defunct processes belonging to 22768
[2026-03-28 12:28:33] 2026-03-28 11:27:43,638 | INFO     | ready for new job
[2026-03-28 12:28:33] 2026-03-28 11:27:43,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-28 12:28:33] 2026-03-28 11:27:43,640 | INFO     | **************************************
[2026-03-28 12:28:33] 2026-03-28 11:27:43,640 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-28 12:28:33] 2026-03-28 11:27:43,641 | INFO     | **************************************
[2026-03-28 12:28:33] 2026-03-28 11:27:43,641 | INFO     | 
[2026-03-28 12:28:33] 2026-03-28 11:27:43,641 | INFO     | pilot is running in a VM
[2026-03-28 12:28:33] 2026-03-28 11:27:43,641 | INFO     | architecture information:
[2026-03-28 12:28:33] 2026-03-28 11:27:43,642 | INFO     | executing command: cat /etc/os-release
[2026-03-28 12:28:33] 2026-03-28 11:27:43,725 | INFO     | cat /etc/os-release:
[2026-03-28 12:28:33] NAME="CentOS Linux"
[2026-03-28 12:28:33] VERSION="7 (Core)"
[2026-03-28 12:28:33] ID="centos"
[2026-03-28 12:28:33] ID_LIKE="rhel fedora"
[2026-03-28 12:28:33] VERSION_ID="7"
[2026-03-28 12:28:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-28 12:28:33] ANSI_COLOR="0;31"
[2026-03-28 12:28:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-28 12:28:33] HOME_URL="https://www.centos.org/"
[2026-03-28 12:28:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-28 12:28:33] 
[2026-03-28 12:28:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-28 12:28:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-28 12:28:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-28 12:28:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-28 12:28:33] 
[2026-03-28 12:28:33] 2026-03-28 11:27:43,726 | INFO     | **************************************
[2026-03-28 12:28:33] 2026-03-28 11:27:44,229 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-28 12:28:33] 2026-03-28 11:27:44,443 | INFO     | sufficient remaining disk space (496426287104 B)
[2026-03-28 12:28:33] 2026-03-28 11:27:44,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-28 12:28:33] 2026-03-28 11:27:44,443 | INFO     | current server update state: UPDATING_FINAL
[2026-03-28 12:28:33] 2026-03-28 11:27:44,443 | INFO     | update_server=False
[2026-03-28 12:28:33] 2026-03-28 11:27:44,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-28 12:28:33] 2026-03-28 11:27:44,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-28 12:28:33] 2026-03-28 11:27:44,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-28 12:28:33] 2026-03-28 11:27:44,576 | INFO     | aborting loop
[2026-03-28 12:28:33] 2026-03-28 11:27:45,131 | INFO     | all data control threads have been joined
[2026-03-28 12:28:33] 2026-03-28 11:27:45,198 | INFO     | all payload control threads have been joined
[2026-03-28 12:28:33] 2026-03-28 11:27:45,449 | INFO     | [job] retrieve thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:45,582 | INFO     | [job] job monitor thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:45,592 | INFO     | [payload] validate_pre thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:45,682 | INFO     | [job] create_data_payload thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:46,124 | INFO     | all job control threads have been joined
[2026-03-28 12:28:33] 2026-03-28 11:27:46,137 | INFO     | [data] control thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:46,204 | INFO     | [payload] control thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:46,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-28 12:28:33] 2026-03-28 11:27:46,443 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:46,445 | INFO     | [payload] validate_post thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:46,454 | INFO     | [data] copytool_out thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:46,676 | INFO     | [payload] execute_payloads thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:46,695 | INFO     | [payload] failed_post thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:46,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-28 12:28:33] 2026-03-28 11:27:46,818 | INFO     | [job] validate thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:46,824 | INFO     | [data] copytool_in thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:47,130 | INFO     | [job] control thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:47,823 | INFO     | [job] queue monitor thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:27:50,307 | INFO     | [data] queue_monitor thread has finished
[2026-03-28 12:28:33] 2026-03-28 11:28:15,222 | INFO     | PID=18314 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-28 12:28:33] 2026-03-28 11:28:15,223 | INFO     | .. there are 9 such processes running
[2026-03-28 12:28:33] 2026-03-28 11:28:15,223 | INFO     | found 0 job(s) in 20 queues
[2026-03-28 12:28:33] 2026-03-28 11:28:15,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-28 12:28:33] 2026-03-28 11:28:15,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-28 12:28:33] 2026-03-28 11:28:24,525 | INFO     | [monitor] cgroup control has ended
[2026-03-28 12:28:33] 2026-03-28 11:28:25,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721568462656)>', '<ExcThread(monitor, started 139720839386880)>']
[2026-03-28 12:28:33] 2026-03-28 11:28:26,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-28 12:28:33] 2026-03-28 11:28:26,290 | INFO     | [monitor] control thread has ended
[2026-03-28 12:28:33] 2026-03-28 11:28:30,412 | INFO     | all workflow threads have been joined
[2026-03-28 12:28:33] 2026-03-28 11:28:30,412 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-28 12:28:33] 2026-03-28 11:28:30,413 | INFO     | traces error code: 0
[2026-03-28 12:28:33] 2026-03-28 11:28:30,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-28 12:28:33] 2026-03-28 11:28:30,560 [wrapper] ==== pilot stdout END ====
[2026-03-28 12:28:33] 2026-03-28 11:28:30,622 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-28 12:28:33] 2026-03-28 11:28:30,728 [wrapper] pilotpid: 18314
[2026-03-28 12:28:33] 2026-03-28 11:28:30,816 [wrapper] Pilot exit status: 0
[2026-03-28 12:28:33] 2026-03-28 11:28:31,325 [wrapper] pandaids: 7063611704
[2026-03-28 12:28:33] 2026-03-28 11:28:32,646 [wrapper] cleanup supervisor_pilot 29563 18315
[2026-03-28 12:28:33] 2026-03-28 11:28:32,724 [wrapper] Test setup, not cleaning
[2026-03-28 12:28:33] 2026-03-28 11:28:32,739 [wrapper] apfmon messages muted
[2026-03-28 12:28:33] 2026-03-28 11:28:32,743 [wrapper] ==== wrapper stdout END ====
[2026-03-28 12:28:33] 2026-03-28 11:28:32,746 [wrapper] ==== wrapper stderr END ====
[2026-03-28 12:28:33]  *** Error codes and diagnostics ***
[2026-03-28 12:28:33]     "exeErrorCode": 0,
[2026-03-28 12:28:33]     "exeErrorDiag": "",
[2026-03-28 12:28:33]     "pilotErrorCode": 0,
[2026-03-28 12:28:33]     "pilotErrorDiag": "",
[2026-03-28 12:28:33]  *** Listing of results directory ***
[2026-03-28 12:28:33] total 430756
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc    585013 Mar 28 01:55 pilot3.tar.gz
[2026-03-28 12:28:33] -rwx------. 1 boinc boinc     36322 Mar 28 01:56 runpilot2-wrapper.sh
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc      5118 Mar 28 02:08 queuedata.json
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc       100 Mar 28 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-28 12:28:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 28 07:07 run_atlas
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc       105 Mar 28 07:07 job.xml
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc      6391 Mar 28 07:07 init_data.xml
[2026-03-28 12:28:33] -rw-r--r--. 2 boinc boinc 218596029 Mar 28 07:07 EVNT.48967092._000617.pool.root.1
[2026-03-28 12:28:33] -rw-r--r--. 2 boinc boinc     15845 Mar 28 07:07 start_atlas.sh
[2026-03-28 12:28:33] drwxrwx--x. 2 boinc boinc        68 Mar 28 07:07 shared
[2026-03-28 12:28:33] -rw-r--r--. 2 boinc boinc    597543 Mar 28 07:07 input.tar.gz
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc         0 Mar 28 07:07 boinc_lockfile
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc      2601 Mar 28 07:07 pandaJob.out
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc   1005053 Mar 28 07:07 agis_schedconf.cvmfs.json
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc       415 Mar 28 07:07 workernode_map.json
[2026-03-28 12:28:33] drwx------. 5 boinc boinc      4096 Mar 28 07:07 pilot3
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc 212218298 Mar 28 12:26 HITS.48967094._015887.pool.root.1
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc       530 Mar 28 12:26 boinc_task_state.xml
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc      1015 Mar 28 12:27 memory_monitor_summary.json
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc        95 Mar 28 12:27 pilot_heartbeat.json
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc   1511579 Mar 28 12:27 agis_ddmendpoints.agis.ALL.json
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc    524182 Mar 28 12:27 log.48967094._015887.job.log.tgz.1
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc      6317 Mar 28 12:27 heartbeat.json
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc        28 Mar 28 12:28 wrapper_checkpoint.txt
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc      8192 Mar 28 12:28 boinc_mmap_file
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc      4881 Mar 28 12:28 pilotlog.txt
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc   2656563 Mar 28 12:28 log.48967094._015887.job.log.1
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc       357 Mar 28 12:28 output.list
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc       620 Mar 28 12:28 runtime_log
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc   3194880 Mar 28 12:28 result.tar.gz
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc      8832 Mar 28 12:28 runtime_log.err
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc       656 Mar 28 12:28 OuMMDmC9WQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmoxFKDmeVNGDo.diag
[2026-03-28 12:28:33] -rw-r--r--. 1 boinc boinc     20741 Mar 28 12:28 stderr.txt
[2026-03-28 12:28:33] HITS file was successfully produced:
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc 212218298 Mar 28 12:26 shared/HITS.pool.root.1
[2026-03-28 12:28:33]  *** Contents of shared directory: ***
[2026-03-28 12:28:33] total 424444
[2026-03-28 12:28:33] -rw-r--r--. 2 boinc boinc 218596029 Mar 28 07:07 ATLAS.root_0
[2026-03-28 12:28:33] -rw-r--r--. 2 boinc boinc     15845 Mar 28 07:07 start_atlas.sh
[2026-03-28 12:28:33] -rw-r--r--. 2 boinc boinc    597543 Mar 28 07:07 input.tar.gz
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc 212218298 Mar 28 12:26 HITS.pool.root.1
[2026-03-28 12:28:33] -rw-------. 1 boinc boinc   3194880 Mar 28 12:28 result.tar.gz
12:28:34 (14544): run_atlas exited; CPU time 75816.441804
12:28:34 (14544): called boinc_finish(0)

</stderr_txt>
]]>

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