Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:18:43 (3089293): wrapper (7.7.26015): starting
01:18:43 (3089293): wrapper: running run_atlas (--nthreads 2)
[2026-03-28 01:18:43] Arguments: --nthreads 2
[2026-03-28 01:18:43] Threads: 2
[2026-03-28 01:18:43] Checking for CVMFS
[2026-03-28 01:18:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 01:18:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 01:18:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 01:18:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 01:18:44] 2.9.2.0 3078205 4 37900 157781 3 8 29364639 36864000 0 130560 0 33907 99.956 5057 2969 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-28 01:18:44] CVMFS is ok
[2026-03-28 01:18:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-28 01:18:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-28 01:18:44] Further information can be found at the LHC@home message board.
[2026-03-28 01:18:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 01:18:44] Checking for apptainer binary...
[2026-03-28 01:18:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-28 01:18:44] Running /usr/bin/apptainer --version
[2026-03-28 01:18:44] apptainer version 1.4.1-1.1
[2026-03-28 01:18:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 01:18:44] madmaxA277a
[2026-03-28 01:18:44] apptainer works
[2026-03-28 01:18:44] Set ATHENA_PROC_NUMBER=2
[2026-03-28 01:18:44] Set ATHENA_CORE_NUMBER=2
[2026-03-28 01:18:44] Starting ATLAS job with PandaID=7071173369
[2026-03-28 01:18:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-28 01:23:10]  *** The last 200 lines of the pilot log: ***
[2026-03-28 01:23:10] 2026-03-28 00:22:23,089 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,089 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,089 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,089 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,089 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,089 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,090 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-28 01:23:10] 2026-03-28 00:22:23,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,090 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-28 01:23:10] 2026-03-28 00:22:23,090 | INFO     | job 7071173369 has completed (purged errors)
[2026-03-28 01:23:10] 2026-03-28 00:22:23,090 | INFO     | overall cleanup function is called
[2026-03-28 01:23:10] 2026-03-28 00:22:24,095 | INFO     | --- collectZombieJob: --- 10, [3096551]
[2026-03-28 01:23:10] 2026-03-28 00:22:24,096 | INFO     | zombie collector waiting for pid 3096551
[2026-03-28 01:23:10] 2026-03-28 00:22:24,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-28 01:23:10] 2026-03-28 00:22:24,096 | INFO     | collected zombie processes
[2026-03-28 01:23:10] 2026-03-28 00:22:24,096 | INFO     | will attempt to kill all subprocesses of pid=3096551
[2026-03-28 01:23:10] 2026-03-28 00:22:24,129 | INFO     | process IDs to be killed: [3096551] (in reverse order)
[2026-03-28 01:23:10] 2026-03-28 00:22:24,152 | WARNING  | found no corresponding commands to process id(s)
[2026-03-28 01:23:10] 2026-03-28 00:22:24,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-28 01:23:10] 2026-03-28 00:22:24,153 | INFO     | did not find any defunct processes belonging to 3096551
[2026-03-28 01:23:10] 2026-03-28 00:22:24,154 | INFO     | did not find any defunct processes belonging to 3096551
[2026-03-28 01:23:10] 2026-03-28 00:22:24,154 | INFO     | ready for new job
[2026-03-28 01:23:10] 2026-03-28 00:22:24,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-28 01:23:10] 2026-03-28 00:22:24,154 | INFO     | **************************************
[2026-03-28 01:23:10] 2026-03-28 00:22:24,154 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-28 01:23:10] 2026-03-28 00:22:24,154 | INFO     | **************************************
[2026-03-28 01:23:10] 2026-03-28 00:22:24,154 | INFO     | 
[2026-03-28 01:23:10] 2026-03-28 00:22:24,154 | INFO     | architecture information:
[2026-03-28 01:23:10] 2026-03-28 00:22:24,155 | INFO     | executing command: cat /etc/os-release
[2026-03-28 01:23:10] 2026-03-28 00:22:24,163 | INFO     | cat /etc/os-release:
[2026-03-28 01:23:10] NAME="CentOS Linux"
[2026-03-28 01:23:10] VERSION="7 (Core)"
[2026-03-28 01:23:10] ID="centos"
[2026-03-28 01:23:10] ID_LIKE="rhel fedora"
[2026-03-28 01:23:10] VERSION_ID="7"
[2026-03-28 01:23:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-28 01:23:10] ANSI_COLOR="0;31"
[2026-03-28 01:23:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-28 01:23:10] HOME_URL="https://www.centos.org/"
[2026-03-28 01:23:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-28 01:23:10] 
[2026-03-28 01:23:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-28 01:23:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-28 01:23:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-28 01:23:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-28 01:23:10] 
[2026-03-28 01:23:10] 2026-03-28 00:22:24,163 | INFO     | **************************************
[2026-03-28 01:23:10] 2026-03-28 00:22:24,667 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-28 01:23:10] 2026-03-28 00:22:24,679 | INFO     | sufficient remaining disk space (489899950080 B)
[2026-03-28 01:23:10] 2026-03-28 00:22:24,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-28 01:23:10] 2026-03-28 00:22:24,680 | INFO     | current server update state: UPDATING_FINAL
[2026-03-28 01:23:10] 2026-03-28 00:22:24,680 | INFO     | update_server=False
[2026-03-28 01:23:10] 2026-03-28 00:22:24,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-28 01:23:10] 2026-03-28 00:22:24,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-28 01:23:10] 2026-03-28 00:22:24,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-28 01:23:10] 2026-03-28 00:22:24,680 | INFO     | aborting loop
[2026-03-28 01:23:10] 2026-03-28 00:22:24,935 | INFO     | all data control threads have been joined
[2026-03-28 01:23:10] 2026-03-28 00:22:25,404 | INFO     | all job control threads have been joined
[2026-03-28 01:23:10] 2026-03-28 00:22:25,685 | INFO     | [job] retrieve thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:25,686 | INFO     | [job] queue monitor thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:25,686 | INFO     | [job] job monitor thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:25,709 | INFO     | [payload] failed_post thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:25,755 | INFO     | all payload control threads have been joined
[2026-03-28 01:23:10] 2026-03-28 00:22:25,941 | INFO     | [data] control thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:26,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-28 01:23:10] 2026-03-28 00:22:26,410 | INFO     | [job] control thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:26,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-28 01:23:10] 2026-03-28 00:22:26,712 | INFO     | [job] validate thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:26,733 | INFO     | [payload] validate_post thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:26,741 | INFO     | [payload] execute_payloads thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:26,761 | INFO     | [payload] control thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:26,780 | INFO     | [job] create_data_payload thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:26,831 | INFO     | [payload] validate_pre thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:26,882 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:26,927 | INFO     | [data] copytool_in thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:28,089 | INFO     | [data] copytool_out thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:30,559 | INFO     | [data] queue_monitor thread has finished
[2026-03-28 01:23:10] 2026-03-28 00:22:54,704 | INFO     | PID=3093005 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-28 01:23:10] 2026-03-28 00:22:54,704 | INFO     | found 0 job(s) in 20 queues
[2026-03-28 01:23:10] 2026-03-28 00:22:54,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-28 01:23:10] 2026-03-28 00:22:54,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-28 01:23:10] 2026-03-28 00:23:03,896 | INFO     | [monitor] cgroup control has ended
[2026-03-28 01:23:10] 2026-03-28 00:23:05,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528415127360)>', '<ExcThread(monitor, started 140527672473344)>']
[2026-03-28 01:23:10] 2026-03-28 00:23:06,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-28 01:23:10] 2026-03-28 00:23:06,765 | INFO     | [monitor] control thread has ended
[2026-03-28 01:23:10] 2026-03-28 00:23:10,885 | INFO     | all workflow threads have been joined
[2026-03-28 01:23:10] 2026-03-28 00:23:10,885 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-28 01:23:10] 2026-03-28 00:23:10,886 | INFO     | traces error code: 0
[2026-03-28 01:23:10] 2026-03-28 00:23:10,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-28 01:23:10] 2026-03-28 00:23:10,927 [wrapper] ==== pilot stdout END ====
[2026-03-28 01:23:10] 2026-03-28 00:23:10,930 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-28 01:23:10] 2026-03-28 00:23:10,932 [wrapper] pilotpid: 3093005
[2026-03-28 01:23:10] 2026-03-28 00:23:10,935 [wrapper] Pilot exit status: 0
[2026-03-28 01:23:10] 2026-03-28 00:23:10,941 [wrapper] pandaids: 7071173369
[2026-03-28 01:23:10] 2026-03-28 00:23:10,953 [wrapper] cleanup supervisor_pilot 3093011 3093006
[2026-03-28 01:23:10] 2026-03-28 00:23:10,955 [wrapper] Test setup, not cleaning
[2026-03-28 01:23:10] 2026-03-28 00:23:10,957 [wrapper] apfmon messages muted
[2026-03-28 01:23:10] 2026-03-28 00:23:10,959 [wrapper] ==== wrapper stdout END ====
[2026-03-28 01:23:10] 2026-03-28 00:23:10,962 [wrapper] ==== wrapper stderr END ====
[2026-03-28 01:23:10]  *** Error codes and diagnostics ***
[2026-03-28 01:23:10]     "exeErrorCode": 0,
[2026-03-28 01:23:10]     "exeErrorDiag": "",
[2026-03-28 01:23:10]     "pilotErrorCode": 1305,
[2026-03-28 01:23:10]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2026-03-28 01:23:10]  *** Listing of results directory ***
[2026-03-28 01:23:10] total 315352
[2026-03-28 01:23:10] -rwx------ 1 boinc boinc     36322 Mar 27 08:52 runpilot2-wrapper.sh
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc    585013 Mar 27 11:41 pilot3.tar.gz
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc      5118 Mar 28 00:24 queuedata.json
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc       100 Mar 28 01:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-28 01:23:10] -rwxr-xr-x 1 boinc boinc      7986 Mar 28 01:18 run_atlas
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc       105 Mar 28 01:18 job.xml
[2026-03-28 01:23:10] -rw-r--r-- 2 boinc boinc 318812671 Mar 28 01:18 EVNT.48025063._001154.pool.root.1
[2026-03-28 01:23:10] -rw-r--r-- 2 boinc boinc    597539 Mar 28 01:18 input.tar.gz
[2026-03-28 01:23:10] -rw-r--r-- 2 boinc boinc     15845 Mar 28 01:18 start_atlas.sh
[2026-03-28 01:23:10] drwxrwx--x 2 boinc boinc      4096 Mar 28 01:18 shared
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc         0 Mar 28 01:18 boinc_setup_complete
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc      6209 Mar 28 01:18 init_data.xml
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc         0 Mar 28 01:18 boinc_lockfile
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc      2483 Mar 28 01:18 pandaJob.out
[2026-03-28 01:23:10] -rw------- 1 boinc boinc   1005053 Mar 28 01:18 agis_schedconf.cvmfs.json
[2026-03-28 01:23:10] -rw------- 1 boinc boinc   1511579 Mar 28 01:18 agis_ddmendpoints.agis.ALL.json
[2026-03-28 01:23:10] -rw------- 1 boinc boinc       424 Mar 28 01:19 workernode_map.json
[2026-03-28 01:23:10] drwx------ 5 boinc boinc      4096 Mar 28 01:19 pilot3
[2026-03-28 01:23:10] -rw------- 1 boinc boinc      8554 Mar 28 01:20 log.48080888._017154.job.log.tgz.1
[2026-03-28 01:23:10] -rw------- 1 boinc boinc        95 Mar 28 01:21 pilot_heartbeat.json
[2026-03-28 01:23:10] -rw------- 1 boinc boinc      2680 Mar 28 01:22 heartbeat.json
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc      8192 Mar 28 01:22 boinc_mmap_file
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc        22 Mar 28 01:22 wrapper_checkpoint.txt
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc       522 Mar 28 01:22 boinc_task_state.xml
[2026-03-28 01:23:10] -rw------- 1 boinc boinc      4748 Mar 28 01:23 pilotlog.txt
[2026-03-28 01:23:10] -rw------- 1 boinc boinc     88955 Mar 28 01:23 log.48080888._017154.job.log.1
[2026-03-28 01:23:10] -rw------- 1 boinc boinc       188 Mar 28 01:23 output.list
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc       620 Mar 28 01:23 runtime_log
[2026-03-28 01:23:10] -rw------- 1 boinc boinc    112640 Mar 28 01:23 result.tar.gz
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc      8768 Mar 28 01:23 runtime_log.err
[2026-03-28 01:23:10] -rw------- 1 boinc boinc       649 Mar 28 01:23 59PNDme8GQ9nsSi4ap6QjLDmwznN0nGgGQJmEDGKDmmEFKDmr8KCbn.diag
[2026-03-28 01:23:10] -rw-r--r-- 1 boinc boinc     12202 Mar 28 01:23 stderr.txt
[2026-03-28 01:23:11] No HITS result produced
[2026-03-28 01:23:11]  *** Contents of shared directory: ***
[2026-03-28 01:23:11] total 312060
[2026-03-28 01:23:11] -rw-r--r-- 2 boinc boinc 318812671 Mar 28 01:18 ATLAS.root_0
[2026-03-28 01:23:11] -rw-r--r-- 2 boinc boinc    597539 Mar 28 01:18 input.tar.gz
[2026-03-28 01:23:11] -rw-r--r-- 2 boinc boinc     15845 Mar 28 01:18 start_atlas.sh
[2026-03-28 01:23:11] -rw------- 1 boinc boinc    112640 Mar 28 01:23 result.tar.gz
01:23:12 (3089293): run_atlas exited; CPU time 9.397337
01:23:12 (3089293): called boinc_finish(0)

</stderr_txt>
]]>

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