Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
20:01:30 (319647): wrapper (7.7.26015): starting
20:01:30 (319647): wrapper: running run_atlas (--nthreads 4)
[2026-03-27 20:01:30] Arguments: --nthreads 4
[2026-03-27 20:01:30] Threads: 4
[2026-03-27 20:01:30] Checking for CVMFS
[2026-03-27 20:01:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-27 20:01:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-27 20:01:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-27 20:01:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-27 20:01:32] 2.13.3.0 196821 400 50744 157780 0 51 3321011 4096001 1763 130560 0 136410 98.397 213627 827 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-27 20:01:32] CVMFS is ok
[2026-03-27 20:01:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-27 20:01:32] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-27 20:01:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-27 20:01:32] Further information can be found at the LHC@home message board.
[2026-03-27 20:01:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-27 20:01:32] Checking for apptainer binary...
[2026-03-27 20:01:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-27 20:01:32] Running /usr/bin/apptainer --version
[2026-03-27 20:01:32] apptainer version 1.4.5
[2026-03-27 20:01:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-27 20:01:32] T5810-Ubuntu
[2026-03-27 20:01:32] apptainer works
[2026-03-27 20:01:32] Set ATHENA_PROC_NUMBER=4
[2026-03-27 20:01:32] Set ATHENA_CORE_NUMBER=4
[2026-03-27 20:01:32] Starting ATLAS job with PandaID=7056950021
[2026-03-27 20:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-28 04:17:48]  *** The last 200 lines of the pilot log: ***
[2026-03-28 04:17:48] 2026-03-28 08:16:54,700 | INFO     | log transfer has been attempted: DONE
[2026-03-28 04:17:48] 2026-03-28 08:16:54,700 | INFO     | job 7056950021 has finished - writing final server update
[2026-03-28 04:17:48] 2026-03-28 08:16:54,700 | INFO     | total number of processed events: 400 (read)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,708 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/21/PanDA_Pilot-7056950021/memory_monitor_summary.json (trf name=prmon)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,709 | INFO     | extracted standard info from prmon json
[2026-03-28 04:17:48] 2026-03-28 08:16:54,709 | INFO     | extracted standard memory fields from prmon json
[2026-03-28 04:17:48] 2026-03-28 08:16:54,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-28 04:17:48] 2026-03-28 08:16:54,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-28 04:17:48] 2026-03-28 08:16:54,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-28 04:17:48] 2026-03-28 08:16:54,718 | INFO     | fitting pss+swap vs Time
[2026-03-28 04:17:48] 2026-03-28 08:16:54,719 | INFO     | sum of square deviations: 35814878028.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,726 | INFO     | sum of deviations: 13579243672.000004
[2026-03-28 04:17:48] 2026-03-28 08:16:54,726 | INFO     | mean x: 1774670963.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,726 | INFO     | mean y: 2327987.5564681725
[2026-03-28 04:17:48] 2026-03-28 08:16:54,726 | INFO     | intersect: -670540126.788626
[2026-03-28 04:17:48] 2026-03-28 08:16:54,727 | INFO     | chi2: 1.9919553864231103
[2026-03-28 04:17:48] 2026-03-28 08:16:54,728 | INFO     | sum of square deviations: 34723034300.5
[2026-03-28 04:17:48] 2026-03-28 08:16:54,734 | INFO     | sum of deviations: 41310172828.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,735 | INFO     | mean x: 1774670810.5
[2026-03-28 04:17:48] 2026-03-28 08:16:54,735 | INFO     | mean y: 2331828.1991701243
[2026-03-28 04:17:48] 2026-03-28 08:16:54,735 | INFO     | intersect: -2109003179.5684597
[2026-03-28 04:17:48] 2026-03-28 08:16:54,736 | INFO     | chi2: 1.323951115242205
[2026-03-28 04:17:48] 2026-03-28 08:16:54,736 | INFO     | current chi2=1.323951115242205 (change=33.535102027582 %)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,737 | INFO     | sum of square deviations: 33653609598.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,743 | INFO     | sum of deviations: 40575244279.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,743 | INFO     | mean x: 1774670658.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,743 | INFO     | mean y: 2331723.394129979
[2026-03-28 04:17:48] 2026-03-28 08:16:54,744 | INFO     | intersect: -2137340553.169125
[2026-03-28 04:17:48] 2026-03-28 08:16:54,744 | INFO     | chi2: 1.3240751606563441
[2026-03-28 04:17:48] 2026-03-28 08:16:54,744 | INFO     | current chi2=1.3240751606563441 (change=-0.009369334918112588 %)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,745 | INFO     | right removable region: 476
[2026-03-28 04:17:48] 2026-03-28 08:16:54,745 | INFO     | sum of square deviations: 34723034300.5
[2026-03-28 04:17:48] 2026-03-28 08:16:54,752 | INFO     | sum of deviations: -36602170623.99999
[2026-03-28 04:17:48] 2026-03-28 08:16:54,752 | INFO     | mean x: 1774671115.5
[2026-03-28 04:17:48] 2026-03-28 08:16:54,752 | INFO     | mean y: 2334943.601659751
[2026-03-28 04:17:48] 2026-03-28 08:16:54,753 | INFO     | intersect: 1873047462.8148794
[2026-03-28 04:17:48] 2026-03-28 08:16:54,753 | INFO     | chi2: 0.7481588451086539
[2026-03-28 04:17:48] 2026-03-28 08:16:54,754 | INFO     | current chi2=0.7481588451086539 (change=62.44098385897596 %)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,754 | INFO     | sum of square deviations: 33653609598.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,761 | INFO     | sum of deviations: -26009686604.999996
[2026-03-28 04:17:48] 2026-03-28 08:16:54,761 | INFO     | mean x: 1774671268.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,761 | INFO     | mean y: 2333433.679245283
[2026-03-28 04:17:48] 2026-03-28 08:16:54,761 | INFO     | intersect: 1373914196.0091534
[2026-03-28 04:17:48] 2026-03-28 08:16:54,762 | INFO     | chi2: 0.7287248120979243
[2026-03-28 04:17:48] 2026-03-28 08:16:54,762 | INFO     | current chi2=0.7287248120979243 (change=2.5975811337106203 %)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,762 | INFO     | left removable region: 20
[2026-03-28 04:17:48] 2026-03-28 08:16:54,763 | INFO     | sum of square deviations: 29401593130.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,769 | INFO     | sum of deviations: 23833348796.0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,769 | INFO     | mean x: 1774671237.5
[2026-03-28 04:17:48] 2026-03-28 08:16:54,769 | INFO     | mean y: 2333858.789473684
[2026-03-28 04:17:48] 2026-03-28 08:16:54,770 | INFO     | intersect: -1436239840.7563934
[2026-03-28 04:17:48] 2026-03-28 08:16:54,770 | INFO     | chi2: 0.002269524371436321
[2026-03-28 04:17:48] 2026-03-28 08:16:54,771 | INFO     | current memory leak: 0.81 B/s (using 456 data points, chi2=0.00)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,771 | INFO     | could have reported an average CPU frequency of 2665 MHz (20 samples)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,771 | INFO     | ..............................
[2026-03-28 04:17:48] 2026-03-28 08:16:54,772 | INFO     | . Timing measurements:
[2026-03-28 04:17:48] 2026-03-28 08:16:54,772 | INFO     | . get job = 0 s
[2026-03-28 04:17:48] 2026-03-28 08:16:54,772 | INFO     | . initial setup = 9 s
[2026-03-28 04:17:48] 2026-03-28 08:16:54,772 | INFO     | . payload setup = 9 s
[2026-03-28 04:17:48] 2026-03-28 08:16:54,772 | INFO     | . stage-in = 0 s
[2026-03-28 04:17:48] 2026-03-28 08:16:54,772 | INFO     | . payload execution = 29670 s
[2026-03-28 04:17:48] 2026-03-28 08:16:54,772 | INFO     | . stage-out = 2 s
[2026-03-28 04:17:48] 2026-03-28 08:16:54,772 | INFO     | . log creation = 0 s
[2026-03-28 04:17:48] 2026-03-28 08:16:54,772 | INFO     | ..............................
[2026-03-28 04:17:48] 2026-03-28 08:16:54,875 | INFO     | 
[2026-03-28 04:17:48] 2026-03-28 08:16:54,875 | INFO     | job summary report
[2026-03-28 04:17:48] 2026-03-28 08:16:54,875 | INFO     | --------------------------------------------------
[2026-03-28 04:17:48] 2026-03-28 08:16:54,875 | INFO     | PanDA job id: 7056950021
[2026-03-28 04:17:48] 2026-03-28 08:16:54,875 | INFO     | task id: 49179225
[2026-03-28 04:17:48] 2026-03-28 08:16:54,875 | INFO     | errors: (none)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,876 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-28 04:17:48] 2026-03-28 08:16:54,876 | INFO     | pilot state: finished 
[2026-03-28 04:17:48] 2026-03-28 08:16:54,876 | INFO     | transexitcode: 0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,876 | INFO     | exeerrorcode: 0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,876 | INFO     | exeerrordiag: 
[2026-03-28 04:17:48] 2026-03-28 08:16:54,876 | INFO     | exitcode: 0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,876 | INFO     | exitmsg: OK
[2026-03-28 04:17:48] 2026-03-28 08:16:54,876 | INFO     | cpuconsumptiontime: 116867 s
[2026-03-28 04:17:48] 2026-03-28 08:16:54,876 | INFO     | nevents: 400
[2026-03-28 04:17:48] 2026-03-28 08:16:54,877 | INFO     | neventsw: 0
[2026-03-28 04:17:48] 2026-03-28 08:16:54,877 | INFO     | pid: 339101
[2026-03-28 04:17:48] 2026-03-28 08:16:54,877 | INFO     | pgrp: 339101
[2026-03-28 04:17:48] 2026-03-28 08:16:54,877 | INFO     | corecount: 4
[2026-03-28 04:17:48] 2026-03-28 08:16:54,877 | INFO     | event service: False
[2026-03-28 04:17:48] 2026-03-28 08:16:54,877 | INFO     | sizes: {0: 2279858, 1: 2280319, 11: 2280319, 29684: 2318160, 29688: 2327244, 29690: 2327382}
[2026-03-28 04:17:48] 2026-03-28 08:16:54,877 | INFO     | --------------------------------------------------
[2026-03-28 04:17:48] 2026-03-28 08:16:54,877 | INFO     | 
[2026-03-28 04:17:48] 2026-03-28 08:16:54,877 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/21
[2026-03-28 04:17:48] 2026-03-28 08:16:54,902 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,902 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,902 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,902 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,904 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,904 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-28 04:17:48] 2026-03-28 08:16:54,904 | INFO     | job 7056950021 has completed (purged errors)
[2026-03-28 04:17:48] 2026-03-28 08:16:54,904 | INFO     | overall cleanup function is called
[2026-03-28 04:17:48] 2026-03-28 08:16:55,913 | INFO     | --- collectZombieJob: --- 10, [339101]
[2026-03-28 04:17:48] 2026-03-28 08:16:55,913 | INFO     | zombie collector waiting for pid 339101
[2026-03-28 04:17:48] 2026-03-28 08:16:55,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-28 04:17:48] 2026-03-28 08:16:55,913 | INFO     | collected zombie processes
[2026-03-28 04:17:48] 2026-03-28 08:16:55,913 | INFO     | will attempt to kill all subprocesses of pid=339101
[2026-03-28 04:17:48] 2026-03-28 08:16:56,178 | INFO     | process IDs to be killed: [339101] (in reverse order)
[2026-03-28 04:17:48] 2026-03-28 08:16:56,258 | WARNING  | found no corresponding commands to process id(s)
[2026-03-28 04:17:48] 2026-03-28 08:16:56,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-28 04:17:48] 2026-03-28 08:16:56,265 | INFO     | did not find any defunct processes belonging to 339101
[2026-03-28 04:17:48] 2026-03-28 08:16:56,271 | INFO     | did not find any defunct processes belonging to 339101
[2026-03-28 04:17:48] 2026-03-28 08:16:56,271 | INFO     | ready for new job
[2026-03-28 04:17:48] 2026-03-28 08:16:56,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-28 04:17:48] 2026-03-28 08:16:56,274 | INFO     | **************************************
[2026-03-28 04:17:48] 2026-03-28 08:16:56,274 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-28 04:17:48] 2026-03-28 08:16:56,274 | INFO     | **************************************
[2026-03-28 04:17:48] 2026-03-28 08:16:56,274 | INFO     | 
[2026-03-28 04:17:48] 2026-03-28 08:16:56,277 | INFO     | architecture information:
[2026-03-28 04:17:48] 2026-03-28 08:16:56,278 | INFO     | executing command: cat /etc/os-release
[2026-03-28 04:17:48] 2026-03-28 08:16:56,292 | INFO     | cat /etc/os-release:
[2026-03-28 04:17:48] NAME="CentOS Linux"
[2026-03-28 04:17:48] VERSION="7 (Core)"
[2026-03-28 04:17:48] ID="centos"
[2026-03-28 04:17:48] ID_LIKE="rhel fedora"
[2026-03-28 04:17:48] VERSION_ID="7"
[2026-03-28 04:17:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-28 04:17:48] ANSI_COLOR="0;31"
[2026-03-28 04:17:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-28 04:17:48] HOME_URL="https://www.centos.org/"
[2026-03-28 04:17:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-28 04:17:48] 
[2026-03-28 04:17:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-28 04:17:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-28 04:17:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-28 04:17:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-28 04:17:48] 
[2026-03-28 04:17:48] 2026-03-28 08:16:56,293 | INFO     | **************************************
[2026-03-28 04:17:48] 2026-03-28 08:16:56,796 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/21
[2026-03-28 04:17:48] 2026-03-28 08:16:56,818 | INFO     | sufficient remaining disk space (402306105344 B)
[2026-03-28 04:17:48] 2026-03-28 08:16:56,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-28 04:17:48] 2026-03-28 08:16:56,819 | INFO     | current server update state: UPDATING_FINAL
[2026-03-28 04:17:48] 2026-03-28 08:16:56,819 | INFO     | update_server=False
[2026-03-28 04:17:48] 2026-03-28 08:16:56,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-28 04:17:48] 2026-03-28 08:16:56,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-28 04:17:48] 2026-03-28 08:16:56,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-28 04:17:48] 2026-03-28 08:16:56,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-28 04:17:48] 2026-03-28 08:16:56,820 | INFO     | aborting loop
[2026-03-28 04:17:48] 2026-03-28 08:16:57,062 | INFO     | all data control threads have been joined
[2026-03-28 04:17:48] 2026-03-28 08:16:57,395 | INFO     | all payload control threads have been joined
[2026-03-28 04:17:48] 2026-03-28 08:16:57,778 | INFO     | all job control threads have been joined
[2026-03-28 04:17:48] 2026-03-28 08:16:57,822 | INFO     | [job] retrieve thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:57,825 | INFO     | [job] job monitor thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:57,825 | INFO     | [job] queue monitor thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,068 | INFO     | [data] control thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,202 | INFO     | [payload] failed_post thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,327 | INFO     | [job] validate thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,400 | INFO     | [payload] control thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,634 | INFO     | [payload] validate_post thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,784 | INFO     | [job] control thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,826 | INFO     | [data] copytool_out thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,856 | INFO     | [job] create_data_payload thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,966 | INFO     | [payload] execute_payloads thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:58,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-28 04:17:48] 2026-03-28 08:16:59,065 | INFO     | [payload] validate_pre thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:16:59,207 | INFO     | [data] copytool_in thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:17:02,992 | INFO     | [data] queue_monitor thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:17:07,725 | INFO     | job.realtimelogging is not enabled
[2026-03-28 04:17:48] 2026-03-28 08:17:08,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-28 04:17:48] 2026-03-28 08:17:26,764 | INFO     | PID=324750 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-28 04:17:48] 2026-03-28 08:17:26,764 | INFO     | .. there are 4 such processes running
[2026-03-28 04:17:48] 2026-03-28 08:17:26,765 | INFO     | found 0 job(s) in 20 queues
[2026-03-28 04:17:48] 2026-03-28 08:17:26,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-28 04:17:48] 2026-03-28 08:17:26,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-28 04:17:48] 2026-03-28 08:17:41,547 | INFO     | [monitor] cgroup control has ended
[2026-03-28 04:17:48] 2026-03-28 08:17:42,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133724890257216)>', '<ExcThread(monitor, started 133724251342592)>']
[2026-03-28 04:17:48] 2026-03-28 08:17:42,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-28 04:17:48] 2026-03-28 08:17:42,837 | INFO     | [monitor] control thread has ended
[2026-03-28 04:17:48] 2026-03-28 08:17:47,850 | INFO     | all workflow threads have been joined
[2026-03-28 04:17:48] 2026-03-28 08:17:47,850 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-28 04:17:48] 2026-03-28 08:17:47,851 | INFO     | traces error code: 0
[2026-03-28 04:17:48] 2026-03-28 08:17:47,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-28 04:17:48] 2026-03-28 08:17:47,969 [wrapper] ==== pilot stdout END ====
[2026-03-28 04:17:48] 2026-03-28 08:17:47,971 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-28 04:17:48] 2026-03-28 08:17:47,976 [wrapper] pilotpid: 324750
[2026-03-28 04:17:48] 2026-03-28 08:17:47,979 [wrapper] Pilot exit status: 0
[2026-03-28 04:17:48] 2026-03-28 08:17:47,990 [wrapper] pandaids: 7056950021
[2026-03-28 04:17:48] 2026-03-28 08:17:48,038 [wrapper] cleanup supervisor_pilot  494658 324751
[2026-03-28 04:17:48] 2026-03-28 08:17:48,041 [wrapper] Test setup, not cleaning
[2026-03-28 04:17:48] 2026-03-28 08:17:48,045 [wrapper] apfmon messages muted
[2026-03-28 04:17:48] 2026-03-28 08:17:48,048 [wrapper] ==== wrapper stdout END ====
[2026-03-28 04:17:48] 2026-03-28 08:17:48,050 [wrapper] ==== wrapper stderr END ====
[2026-03-28 04:17:48]  *** Error codes and diagnostics ***
[2026-03-28 04:17:48]     "exeErrorCode": 0,
[2026-03-28 04:17:48]     "exeErrorDiag": "",
[2026-03-28 04:17:48]     "pilotErrorCode": 0,
[2026-03-28 04:17:48]     "pilotErrorDiag": "",
[2026-03-28 04:17:48]  *** Listing of results directory ***
[2026-03-28 04:17:48] total 492756
[2026-03-28 04:17:48] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 16 11:03 pilot3.tar.gz
[2026-03-28 04:17:48] -rwx------ 1 whitlerd whitlerd     36322 Mar 16 11:05 runpilot2-wrapper.sh
[2026-03-28 04:17:48] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 16 11:06 queuedata.json
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 27 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-28 04:17:48] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 27 20:01 run_atlas
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 27 20:01 job.xml
[2026-03-28 04:17:48] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 27 20:01 start_atlas.sh
[2026-03-28 04:17:48] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 27 20:01 shared
[2026-03-28 04:17:48] -rw-r--r-- 2 whitlerd whitlerd    597538 Mar 27 20:01 input.tar.gz
[2026-03-28 04:17:48] -rw-r--r-- 2 whitlerd whitlerd 247859275 Mar 27 20:01 EVNT.49130933._000003.pool.root.1
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 27 20:01 boinc_setup_complete
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd      9092 Mar 27 20:01 init_data.xml
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 27 20:01 boinc_lockfile
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd      2596 Mar 27 20:01 pandaJob.out
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd   1005053 Mar 27 20:01 agis_schedconf.cvmfs.json
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd       427 Mar 27 20:01 workernode_map.json
[2026-03-28 04:17:48] drwx------ 5 whitlerd whitlerd      4096 Mar 27 20:01 pilot3
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd 243110899 Mar 28 04:16 HITS.49179225._000053.pool.root.1
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar 28 04:16 boinc_task_state.xml
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd      1024 Mar 28 04:16 memory_monitor_summary.json
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd   1511579 Mar 28 04:16 agis_ddmendpoints.agis.ALL.json
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd    604481 Mar 28 04:16 log.49179225._000053.job.log.tgz.1
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd      6318 Mar 28 04:16 heartbeat.json
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd        95 Mar 28 04:17 pilot_heartbeat.json
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 28 04:17 boinc_mmap_file
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd        29 Mar 28 04:17 wrapper_checkpoint.txt
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd      4906 Mar 28 04:17 pilotlog.txt
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd   4229443 Mar 28 04:17 log.49179225._000053.job.log.1
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd       357 Mar 28 04:17 output.list
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 28 04:17 runtime_log
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd   4853760 Mar 28 04:17 result.tar.gz
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd       652 Mar 28 04:17 V65KDmXgOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6mxLDmCJhLxn.diag
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd      9036 Mar 28 04:17 runtime_log.err
[2026-03-28 04:17:48] -rw-rw-r-- 1 whitlerd whitlerd     21108 Mar 28 04:17 stderr.txt
[2026-03-28 04:17:48] HITS file was successfully produced:
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd 243110899 Mar 28 04:16 shared/HITS.pool.root.1
[2026-03-28 04:17:48]  *** Contents of shared directory: ***
[2026-03-28 04:17:48] total 484816
[2026-03-28 04:17:48] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 27 20:01 start_atlas.sh
[2026-03-28 04:17:48] -rw-r--r-- 2 whitlerd whitlerd    597538 Mar 27 20:01 input.tar.gz
[2026-03-28 04:17:48] -rw-r--r-- 2 whitlerd whitlerd 247859275 Mar 27 20:01 ATLAS.root_0
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd 243110899 Mar 28 04:16 HITS.pool.root.1
[2026-03-28 04:17:48] -rw------- 1 whitlerd whitlerd   4853760 Mar 28 04:17 result.tar.gz
04:17:50 (319647): run_atlas exited; CPU time 117838.407799
04:17:50 (319647): called boinc_finish(0)

</stderr_txt>
]]>

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