Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:57:28 (4121285): wrapper (7.7.26015): starting
00:57:28 (4121285): wrapper: running run_atlas (--nthreads 3)
[2026-03-27 00:57:28] Arguments: --nthreads 3
[2026-03-27 00:57:28] Threads: 3
[2026-03-27 00:57:28] Checking for CVMFS
[2026-03-27 00:57:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-27 00:57:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-27 00:57:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-27 00:57:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-27 00:57:29] 2.9.2.0 3580272 6085 83548 157739 3 50 20900892 36864001 0 130560 0 1812629 99.978 212844 14959 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-27 00:57:29] CVMFS is ok
[2026-03-27 00:57:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-27 00:57:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-27 00:57:29] Further information can be found at the LHC@home message board.
[2026-03-27 00:57:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-27 00:57:29] Checking for apptainer binary...
[2026-03-27 00:57:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-27 00:57:29] Running /usr/bin/apptainer --version
[2026-03-27 00:57:29] apptainer version 1.4.1-1.1
[2026-03-27 00:57:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-27 00:57:29] atlasA223
[2026-03-27 00:57:29] apptainer works
[2026-03-27 00:57:29] Set ATHENA_PROC_NUMBER=3
[2026-03-27 00:57:29] Set ATHENA_CORE_NUMBER=3
[2026-03-27 00:57:29] Starting ATLAS job with PandaID=7057257615
[2026-03-27 00:57:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-27 02:42:09]  *** The last 200 lines of the pilot log: ***
[2026-03-27 02:42:09] 2026-03-27 01:41:38,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-27 02:42:09] 2026-03-27 01:41:38,826 | INFO     | aborting loop
[2026-03-27 02:42:09] 2026-03-27 01:41:38,829 | INFO     | all payload control threads have been joined
[2026-03-27 02:42:09] 2026-03-27 01:41:39,561 | INFO     | all job control threads have been joined
[2026-03-27 02:42:09] 2026-03-27 01:41:39,831 | INFO     | [job] retrieve thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:39,831 | INFO     | [job] job monitor thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:39,831 | INFO     | [job] queue monitor thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:39,835 | INFO     | [payload] control thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:39,862 | INFO     | [payload] validate_pre thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:39,878 | INFO     | [job] create_data_payload thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:39,895 | INFO     | all data control threads have been joined
[2026-03-27 02:42:09] 2026-03-27 01:41:39,903 | INFO     | [job] validate thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:39,925 | INFO     | [payload] failed_post thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:40,000 | INFO     | [data] copytool_in thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:40,355 | INFO     | [payload] validate_post thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:40,567 | INFO     | [job] control thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:40,832 | INFO     | [data] copytool_out thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:40,899 | INFO     | [data] control thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:41,311 | INFO     | [payload] execute_payloads thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:42,833 | INFO     | [data] queue_monitor thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:45,046 | INFO     | [monitor] cgroup control has ended
[2026-03-27 02:42:09] 2026-03-27 01:41:49,462 | INFO     | job.realtimelogging is not enabled
[2026-03-27 02:42:09] 2026-03-27 01:41:50,467 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-27 02:42:09] 2026-03-27 01:41:52,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459773372224)>', '<ExcThread(monitor, started 140458843956992)>']
[2026-03-27 02:42:09] 2026-03-27 01:41:57,521 | INFO     | all workflow threads have been joined
[2026-03-27 02:42:09] 2026-03-27 01:41:57,521 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-27 02:42:09] 2026-03-27 01:41:57,521 | INFO     | traces error code: 0
[2026-03-27 02:42:09] 2026-03-27 01:41:57,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-27 02:42:09] 2026-03-27 01:42:09,505 | INFO     | PID=4125334 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-27 02:42:09] 2026-03-27 01:42:09,505 | INFO     | found 0 job(s) in 20 queues
[2026-03-27 02:42:09] 2026-03-27 01:42:09,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-27 02:42:09] 2026-03-27 01:42:09,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-27 02:42:09] 2026-03-27 01:42:09,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-27 02:42:09] 2026-03-27 01:42:09,505 | INFO     | [monitor] control thread has ended
[2026-03-27 02:42:09] 2026-03-27 01:42:09,554 [wrapper] ==== pilot stdout END ====
[2026-03-27 02:42:09] 2026-03-27 01:42:09,556 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-27 02:42:09] 2026-03-27 01:42:09,558 [wrapper] pilotpid: 4125334
[2026-03-27 02:42:09] 2026-03-27 01:42:09,561 [wrapper] Pilot exit status: 0
[2026-03-27 02:42:09] 2026-03-27 01:42:09,568 [wrapper] pandaids: 7057257615
[2026-03-27 02:42:09] 2026-03-27 01:42:09,585 [wrapper] cleanup supervisor_pilot 4135304 4125335
[2026-03-27 02:42:09] 2026-03-27 01:42:09,588 [wrapper] Test setup, not cleaning
[2026-03-27 02:42:09] 2026-03-27 01:42:09,590 [wrapper] apfmon messages muted
[2026-03-27 02:42:09] 2026-03-27 01:42:09,592 [wrapper] ==== wrapper stdout END ====
[2026-03-27 02:42:09] 2026-03-27 01:42:09,594 [wrapper] ==== wrapper stderr END ====
[2026-03-27 02:42:09]  *** Error codes and diagnostics ***
[2026-03-27 02:42:09]     "exeErrorCode": 0,
[2026-03-27 02:42:09]     "exeErrorDiag": "",
[2026-03-27 02:42:09]     "pilotErrorCode": 0,
[2026-03-27 02:42:09]     "pilotErrorDiag": "",
[2026-03-27 02:42:09]  *** Listing of results directory ***
[2026-03-27 02:42:09] total 414228
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc    585013 Mar 18 14:20 pilot3.tar.gz
[2026-03-27 02:42:09] -rwx------ 1 boinc boinc     36322 Mar 18 14:25 runpilot2-wrapper.sh
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc      5111 Mar 18 14:32 queuedata.json
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc       100 Mar 27 00:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-27 02:42:09] -rwxr-xr-x 1 boinc boinc      7986 Mar 27 00:57 run_atlas
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc       105 Mar 27 00:57 job.xml
[2026-03-27 02:42:09] -rw-r--r-- 2 boinc boinc 212865514 Mar 27 00:57 EVNT.48967083._001006.pool.root.1
[2026-03-27 02:42:09] drwxrwx--x 2 boinc boinc      4096 Mar 27 00:57 shared
[2026-03-27 02:42:09] -rw-r--r-- 2 boinc boinc    597520 Mar 27 00:57 input.tar.gz
[2026-03-27 02:42:09] -rw-r--r-- 2 boinc boinc     15845 Mar 27 00:57 start_atlas.sh
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc         0 Mar 27 00:57 boinc_setup_complete
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc      6446 Mar 27 00:57 init_data.xml
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc         0 Mar 27 00:57 boinc_lockfile
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc      2558 Mar 27 00:57 pandaJob.out
[2026-03-27 02:42:09] -rw------- 1 boinc boinc   1012410 Mar 27 00:57 agis_schedconf.cvmfs.json
[2026-03-27 02:42:09] -rw------- 1 boinc boinc   1511579 Mar 27 00:57 agis_ddmendpoints.agis.ALL.json
[2026-03-27 02:42:09] -rw------- 1 boinc boinc       417 Mar 27 00:57 workernode_map.json
[2026-03-27 02:42:09] drwx------ 5 boinc boinc      4096 Mar 27 00:57 pilot3
[2026-03-27 02:42:09] -rw------- 1 boinc boinc 205004452 Mar 27 02:41 HITS.48967085._025040.pool.root.1
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc       529 Mar 27 02:41 boinc_task_state.xml
[2026-03-27 02:42:09] -rw------- 1 boinc boinc      1012 Mar 27 02:41 memory_monitor_summary.json
[2026-03-27 02:42:09] -rw------- 1 boinc boinc    281696 Mar 27 02:41 log.48967085._025040.job.log.tgz.1
[2026-03-27 02:42:09] -rw------- 1 boinc boinc      6290 Mar 27 02:41 heartbeat.json
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc        27 Mar 27 02:41 wrapper_checkpoint.txt
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc      8192 Mar 27 02:41 boinc_mmap_file
[2026-03-27 02:42:09] -rw------- 1 boinc boinc       747 Mar 27 02:42 pilotlog.txt
[2026-03-27 02:42:09] -rw------- 1 boinc boinc        95 Mar 27 02:42 pilot_heartbeat.json
[2026-03-27 02:42:09] -rw------- 1 boinc boinc    904920 Mar 27 02:42 log.48967085._025040.job.log.1
[2026-03-27 02:42:09] -rw------- 1 boinc boinc       357 Mar 27 02:42 output.list
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc       620 Mar 27 02:42 runtime_log
[2026-03-27 02:42:09] -rw------- 1 boinc boinc   1208320 Mar 27 02:42 result.tar.gz
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc      8911 Mar 27 02:42 runtime_log.err
[2026-03-27 02:42:09] -rw------- 1 boinc boinc       660 Mar 27 02:42 ATGMDmj45M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmuWzLDmLMfrUo.diag
[2026-03-27 02:42:09] -rw-r--r-- 1 boinc boinc      6904 Mar 27 02:42 stderr.txt
[2026-03-27 02:42:09] HITS file was successfully produced:
[2026-03-27 02:42:09] -rw------- 1 boinc boinc 205004452 Mar 27 02:41 shared/HITS.pool.root.1
[2026-03-27 02:42:09]  *** Contents of shared directory: ***
[2026-03-27 02:42:09] total 409868
[2026-03-27 02:42:09] -rw-r--r-- 2 boinc boinc 212865514 Mar 27 00:57 ATLAS.root_0
[2026-03-27 02:42:09] -rw-r--r-- 2 boinc boinc    597520 Mar 27 00:57 input.tar.gz
[2026-03-27 02:42:09] -rw-r--r-- 2 boinc boinc     15845 Mar 27 00:57 start_atlas.sh
[2026-03-27 02:42:09] -rw------- 1 boinc boinc 205004452 Mar 27 02:41 HITS.pool.root.1
[2026-03-27 02:42:09] -rw------- 1 boinc boinc   1208320 Mar 27 02:42 result.tar.gz
02:42:11 (4121285): run_atlas exited; CPU time 17654.720722
02:42:11 (4121285): called boinc_finish(0)

</stderr_txt>
]]>

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