Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
17:34:29 (394634): wrapper (7.7.26015): starting
17:34:29 (394634): wrapper: running run_atlas (--nthreads 4)
[2026-03-26 17:34:29] Arguments: --nthreads 4
[2026-03-26 17:34:29] Threads: 4
[2026-03-26 17:34:29] Checking for CVMFS
[2026-03-26 17:34:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 17:34:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 17:34:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 17:34:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 17:34:31] 2.13.3.0 182822 655 49188 157734 2 50 3756072 4096001 2748 130560 0 775320 99.995 23310 727 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-26 17:34:31] CVMFS is ok
[2026-03-26 17:34:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 17:34:31] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-26 17:34:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-26 17:34:31] Further information can be found at the LHC@home message board.
[2026-03-26 17:34:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 17:34:31] Checking for apptainer binary...
[2026-03-26 17:34:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 17:34:31] Running /usr/bin/apptainer --version
[2026-03-26 17:34:31] apptainer version 1.4.5
[2026-03-26 17:34:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 17:34:31] Taichi-Ubuntu
[2026-03-26 17:34:31] apptainer works
[2026-03-26 17:34:31] Set ATHENA_PROC_NUMBER=4
[2026-03-26 17:34:31] Set ATHENA_CORE_NUMBER=4
[2026-03-26 17:34:31] Starting ATLAS job with PandaID=7058767110
[2026-03-26 17:34:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 20:52:12]  *** The last 200 lines of the pilot log: ***
[2026-03-26 20:52:12] 2026-03-27 00:51:07,338 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-26 20:52:12] 2026-03-27 00:51:07,587 | INFO     | job 7058767110 has state=finished
[2026-03-26 20:52:12] 2026-03-27 00:51:07,588 | INFO     | preparing for final server update for job 7058767110 in state='finished'
[2026-03-26 20:52:12] 2026-03-27 00:51:07,899 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,900 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/9/PanDA_Pilot-7058767110/jobReport.json
[2026-03-26 20:52:12] 2026-03-27 00:51:07,902 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/9/workernode_map.json
[2026-03-26 20:52:12] 2026-03-27 00:51:07,902 | INFO     | this job has now completed (state=finished)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,902 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,902 | INFO     | log transfer has been attempted: DONE
[2026-03-26 20:52:12] 2026-03-27 00:51:07,902 | INFO     | job 7058767110 has finished - writing final server update
[2026-03-26 20:52:12] 2026-03-27 00:51:07,903 | INFO     | total number of processed events: 400 (read)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,911 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/9/PanDA_Pilot-7058767110/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,912 | INFO     | extracted standard info from prmon json
[2026-03-26 20:52:12] 2026-03-27 00:51:07,912 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 20:52:12] 2026-03-27 00:51:07,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 20:52:12] 2026-03-27 00:51:07,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 20:52:12] 2026-03-27 00:51:07,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 20:52:12] 2026-03-27 00:51:07,915 | INFO     | fitting pss+swap vs Time
[2026-03-26 20:52:12] 2026-03-27 00:51:07,916 | INFO     | sum of square deviations: 2229146912.0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,917 | INFO     | sum of deviations: -52035582618.0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,917 | INFO     | mean x: 1774566769.0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,917 | INFO     | mean y: 2404108.4196891193
[2026-03-26 20:52:12] 2026-03-27 00:51:07,917 | INFO     | intersect: 41426598818.22839
[2026-03-26 20:52:12] 2026-03-27 00:51:07,917 | INFO     | chi2: 1.6415364676953703
[2026-03-26 20:52:12] 2026-03-27 00:51:07,918 | INFO     | sum of square deviations: 2060343747.0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,919 | INFO     | sum of deviations: -50127171449.000015
[2026-03-26 20:52:12] 2026-03-27 00:51:07,919 | INFO     | mean x: 1774566616.5
[2026-03-26 20:52:12] 2026-03-27 00:51:07,919 | INFO     | mean y: 2405832.8936170214
[2026-03-26 20:52:12] 2026-03-27 00:51:07,919 | INFO     | intersect: 43176757279.09788
[2026-03-26 20:52:12] 2026-03-27 00:51:07,919 | INFO     | chi2: 1.6329342407571588
[2026-03-26 20:52:12] 2026-03-27 00:51:07,919 | INFO     | current chi2=1.6329342407571588 (change=0.5240350797864773 %)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,919 | INFO     | right removable region: 187
[2026-03-26 20:52:12] 2026-03-27 00:51:07,920 | INFO     | sum of square deviations: 2060343747.0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,921 | INFO     | sum of deviations: -69844402321.99998
[2026-03-26 20:52:12] 2026-03-27 00:51:07,921 | INFO     | mean x: 1774566921.5
[2026-03-26 20:52:12] 2026-03-27 00:51:07,921 | INFO     | mean y: 2419847.712765957
[2026-03-26 20:52:12] 2026-03-27 00:51:07,921 | INFO     | intersect: 60159161261.872025
[2026-03-26 20:52:12] 2026-03-27 00:51:07,921 | INFO     | chi2: 0.41076311724662573
[2026-03-26 20:52:12] 2026-03-27 00:51:07,921 | INFO     | current chi2=0.41076311724662573 (change=74.97691185482371 %)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,921 | INFO     | sum of square deviations: 1900284932.0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,922 | INFO     | sum of deviations: -61473777483.99999
[2026-03-26 20:52:12] 2026-03-27 00:51:07,923 | INFO     | mean x: 1774567074.0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,923 | INFO     | mean y: 2411867.081967213
[2026-03-26 20:52:12] 2026-03-27 00:51:07,923 | INFO     | intersect: 57409245758.40546
[2026-03-26 20:52:12] 2026-03-27 00:51:07,923 | INFO     | chi2: 0.4017790871791545
[2026-03-26 20:52:12] 2026-03-27 00:51:07,923 | INFO     | current chi2=0.4017790871791545 (change=2.1871559763427193 %)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,923 | INFO     | left removable region: 20
[2026-03-26 20:52:12] 2026-03-27 00:51:07,923 | INFO     | sum of square deviations: 1444149868.0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,924 | INFO     | sum of deviations: -41763774256.99999
[2026-03-26 20:52:12] 2026-03-27 00:51:07,924 | INFO     | mean x: 1774567196.0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,924 | INFO     | mean y: 2395188.7844311376
[2026-03-26 20:52:12] 2026-03-27 00:51:07,925 | INFO     | intersect: 51321600639.57319
[2026-03-26 20:52:12] 2026-03-27 00:51:07,925 | INFO     | chi2: 0.3507411174487307
[2026-03-26 20:52:12] 2026-03-27 00:51:07,925 | INFO     | current memory leak: -28.92 B/s (using 167 data points, chi2=0.35)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,925 | INFO     | could have reported an average CPU frequency of 3295 MHz (10 samples)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | ..............................
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | . Timing measurements:
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | . get job = 0 s
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | . initial setup = 6 s
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | . payload setup = 8 s
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | . stage-in = 0 s
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | . payload execution = 11749 s
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | . stage-out = 2 s
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | . log creation = 0 s
[2026-03-26 20:52:12] 2026-03-27 00:51:07,926 | INFO     | ..............................
[2026-03-26 20:52:12] 2026-03-27 00:51:07,992 | INFO     | 
[2026-03-26 20:52:12] 2026-03-27 00:51:07,992 | INFO     | job summary report
[2026-03-26 20:52:12] 2026-03-27 00:51:07,992 | INFO     | --------------------------------------------------
[2026-03-26 20:52:12] 2026-03-27 00:51:07,992 | INFO     | PanDA job id: 7058767110
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | task id: 49176756
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | errors: (none)
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | pilot state: finished 
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | transexitcode: 0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | exeerrorcode: 0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | exeerrordiag: 
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | exitcode: 0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | exitmsg: OK
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | cpuconsumptiontime: 46189 s
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | nevents: 400
[2026-03-26 20:52:12] 2026-03-27 00:51:07,993 | INFO     | neventsw: 0
[2026-03-26 20:52:12] 2026-03-27 00:51:07,994 | INFO     | pid: 403542
[2026-03-26 20:52:12] 2026-03-27 00:51:07,994 | INFO     | pgrp: 403542
[2026-03-26 20:52:12] 2026-03-27 00:51:07,994 | INFO     | corecount: 4
[2026-03-26 20:52:12] 2026-03-27 00:51:07,994 | INFO     | event service: False
[2026-03-26 20:52:12] 2026-03-27 00:51:07,994 | INFO     | sizes: {0: 2280222, 11: 2280222, 11761: 2309811, 11763: 2318837, 11766: 2318893, 11767: 2319087}
[2026-03-26 20:52:12] 2026-03-27 00:51:07,994 | INFO     | --------------------------------------------------
[2026-03-26 20:52:12] 2026-03-27 00:51:07,994 | INFO     | 
[2026-03-26 20:52:12] 2026-03-27 00:51:07,994 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/9
[2026-03-26 20:52:12] 2026-03-27 00:51:08,014 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,016 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 20:52:12] 2026-03-27 00:51:08,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,016 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 20:52:12] 2026-03-27 00:51:08,016 | INFO     | job 7058767110 has completed (purged errors)
[2026-03-26 20:52:12] 2026-03-27 00:51:08,017 | INFO     | overall cleanup function is called
[2026-03-26 20:52:12] 2026-03-27 00:51:09,025 | INFO     | --- collectZombieJob: --- 10, [403542]
[2026-03-26 20:52:12] 2026-03-27 00:51:09,026 | INFO     | zombie collector waiting for pid 403542
[2026-03-26 20:52:12] 2026-03-27 00:51:09,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 20:52:12] 2026-03-27 00:51:09,026 | INFO     | collected zombie processes
[2026-03-26 20:52:12] 2026-03-27 00:51:09,026 | INFO     | will attempt to kill all subprocesses of pid=403542
[2026-03-26 20:52:12] 2026-03-27 00:51:09,201 | INFO     | process IDs to be killed: [403542] (in reverse order)
[2026-03-26 20:52:12] 2026-03-27 00:51:09,269 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 20:52:12] 2026-03-27 00:51:09,269 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 20:52:12] 2026-03-27 00:51:09,274 | INFO     | did not find any defunct processes belonging to 403542
[2026-03-26 20:52:12] 2026-03-27 00:51:09,279 | INFO     | did not find any defunct processes belonging to 403542
[2026-03-26 20:52:12] 2026-03-27 00:51:09,279 | INFO     | ready for new job
[2026-03-26 20:52:12] 2026-03-27 00:51:09,279 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 20:52:12] 2026-03-27 00:51:09,281 | INFO     | **************************************
[2026-03-26 20:52:12] 2026-03-27 00:51:09,281 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 20:52:12] 2026-03-27 00:51:09,281 | INFO     | **************************************
[2026-03-26 20:52:12] 2026-03-27 00:51:09,281 | INFO     | 
[2026-03-26 20:52:12] 2026-03-27 00:51:09,283 | INFO     | architecture information:
[2026-03-26 20:52:12] 2026-03-27 00:51:09,283 | INFO     | executing command: cat /etc/os-release
[2026-03-26 20:52:12] 2026-03-27 00:51:09,299 | INFO     | cat /etc/os-release:
[2026-03-26 20:52:12] NAME="CentOS Linux"
[2026-03-26 20:52:12] VERSION="7 (Core)"
[2026-03-26 20:52:12] ID="centos"
[2026-03-26 20:52:12] ID_LIKE="rhel fedora"
[2026-03-26 20:52:12] VERSION_ID="7"
[2026-03-26 20:52:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 20:52:12] ANSI_COLOR="0;31"
[2026-03-26 20:52:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 20:52:12] HOME_URL="https://www.centos.org/"
[2026-03-26 20:52:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 20:52:12] 
[2026-03-26 20:52:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 20:52:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 20:52:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 20:52:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 20:52:12] 
[2026-03-26 20:52:12] 2026-03-27 00:51:09,300 | INFO     | **************************************
[2026-03-26 20:52:12] 2026-03-27 00:51:09,803 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/9
[2026-03-26 20:52:12] 2026-03-27 00:51:09,823 | INFO     | sufficient remaining disk space (386145452032 B)
[2026-03-26 20:52:12] 2026-03-27 00:51:09,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 20:52:12] 2026-03-27 00:51:09,824 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 20:52:12] 2026-03-27 00:51:09,824 | INFO     | update_server=False
[2026-03-26 20:52:12] 2026-03-27 00:51:09,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 20:52:12] 2026-03-27 00:51:09,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 20:52:12] 2026-03-27 00:51:09,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 20:52:12] 2026-03-27 00:51:10,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 20:52:12] 2026-03-27 00:51:10,110 | INFO     | all data control threads have been joined
[2026-03-26 20:52:12] 2026-03-27 00:51:10,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 20:52:12] 2026-03-27 00:51:10,412 | INFO     | aborting loop
[2026-03-26 20:52:12] 2026-03-27 00:51:10,420 | INFO     | all payload control threads have been joined
[2026-03-26 20:52:12] 2026-03-27 00:51:10,829 | INFO     | [job] retrieve thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:10,830 | INFO     | [job] queue monitor thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:10,915 | INFO     | all job control threads have been joined
[2026-03-26 20:52:12] 2026-03-27 00:51:11,116 | INFO     | [data] control thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:11,148 | INFO     | [payload] validate_post thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:11,199 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:11,203 | INFO     | [job] validate thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:11,295 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:11,417 | INFO     | [job] job monitor thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:11,422 | INFO     | [payload] control thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:11,569 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:11,758 | INFO     | [data] copytool_in thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:11,921 | INFO     | [job] control thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:12,079 | INFO     | [data] copytool_out thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:12,091 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:12,137 | INFO     | [payload] failed_post thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:13,829 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 20:52:12] 2026-03-27 00:51:39,474 | INFO     | PID=398882 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-26 20:52:12] 2026-03-27 00:51:39,474 | INFO     | .. there are 4 such processes running
[2026-03-26 20:52:12] 2026-03-27 00:51:39,475 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 20:52:12] 2026-03-27 00:51:39,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 20:52:12] 2026-03-27 00:51:39,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 20:52:12] 2026-03-27 00:52:05,729 | INFO     | [monitor] cgroup control has ended
[2026-03-26 20:52:12] 2026-03-27 00:52:07,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135112964646720)>', '<ExcThread(monitor, started 135112456910592)>']
[2026-03-26 20:52:12] 2026-03-27 00:52:07,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 20:52:12] 2026-03-27 00:52:07,614 | INFO     | [monitor] control thread has ended
[2026-03-26 20:52:12] 2026-03-27 00:52:12,174 | INFO     | all workflow threads have been joined
[2026-03-26 20:52:12] 2026-03-27 00:52:12,174 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 20:52:12] 2026-03-27 00:52:12,174 | INFO     | traces error code: 0
[2026-03-26 20:52:12] 2026-03-27 00:52:12,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 20:52:12] 2026-03-27 00:52:12,293 [wrapper] ==== pilot stdout END ====
[2026-03-26 20:52:12] 2026-03-27 00:52:12,297 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 20:52:12] 2026-03-27 00:52:12,300 [wrapper] pilotpid: 398882
[2026-03-26 20:52:12] 2026-03-27 00:52:12,304 [wrapper] Pilot exit status: 0
[2026-03-26 20:52:12] 2026-03-27 00:52:12,316 [wrapper] pandaids: 7058767110
[2026-03-26 20:52:12] 2026-03-27 00:52:12,357 [wrapper] cleanup supervisor_pilot  455503 398883
[2026-03-26 20:52:12] 2026-03-27 00:52:12,360 [wrapper] Test setup, not cleaning
[2026-03-26 20:52:12] 2026-03-27 00:52:12,363 [wrapper] apfmon messages muted
[2026-03-26 20:52:12] 2026-03-27 00:52:12,366 [wrapper] ==== wrapper stdout END ====
[2026-03-26 20:52:12] 2026-03-27 00:52:12,369 [wrapper] ==== wrapper stderr END ====
[2026-03-26 20:52:12]  *** Error codes and diagnostics ***
[2026-03-26 20:52:12]     "exeErrorCode": 0,
[2026-03-26 20:52:12]     "exeErrorDiag": "",
[2026-03-26 20:52:12]     "pilotErrorCode": 0,
[2026-03-26 20:52:12]     "pilotErrorDiag": "",
[2026-03-26 20:52:12]  *** Listing of results directory ***
[2026-03-26 20:52:12] total 440124
[2026-03-26 20:52:12] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 18 09:20 pilot3.tar.gz
[2026-03-26 20:52:12] -rwx------ 1 whitlerd whitlerd     36322 Mar 18 09:24 runpilot2-wrapper.sh
[2026-03-26 20:52:12] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 18 09:28 queuedata.json
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 26 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 20:52:12] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 26 17:34 run_atlas
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 26 17:34 job.xml
[2026-03-26 20:52:12] -rw-r--r-- 2 whitlerd whitlerd 234813182 Mar 26 17:34 EVNT.49135115._000004.pool.root.1
[2026-03-26 20:52:12] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 26 17:34 start_atlas.sh
[2026-03-26 20:52:12] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 26 17:34 shared
[2026-03-26 20:52:12] -rw-r--r-- 2 whitlerd whitlerd    597546 Mar 26 17:34 input.tar.gz
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd      9220 Mar 26 17:34 init_data.xml
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 26 17:34 boinc_setup_complete
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 26 17:34 boinc_lockfile
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd      2621 Mar 26 17:34 pandaJob.out
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd   1012352 Mar 26 17:34 agis_schedconf.cvmfs.json
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd       433 Mar 26 17:34 workernode_map.json
[2026-03-26 20:52:12] drwx------ 5 whitlerd whitlerd      4096 Mar 26 17:34 pilot3
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd 207774857 Mar 26 20:50 HITS.49176756._000094.pool.root.1
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 26 20:50 boinc_task_state.xml
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd      1039 Mar 26 20:50 memory_monitor_summary.json
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd   1511579 Mar 26 20:51 agis_ddmendpoints.agis.ALL.json
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd    378973 Mar 26 20:51 log.49176756._000094.job.log.tgz.1
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd      6347 Mar 26 20:51 heartbeat.json
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd        95 Mar 26 20:51 pilot_heartbeat.json
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 26 20:52 boinc_mmap_file
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 26 20:52 wrapper_checkpoint.txt
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd      4833 Mar 26 20:52 pilotlog.txt
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd   1697133 Mar 26 20:52 log.49176756._000094.job.log.1
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd       357 Mar 26 20:52 output.list
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 26 20:52 runtime_log
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd   2088960 Mar 26 20:52 result.tar.gz
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd      9025 Mar 26 20:52 runtime_log.err
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd       652 Mar 26 20:52 RJ3KDmd35M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMNzLDmDnBbem.diag
[2026-03-26 20:52:12] -rw-rw-r-- 1 whitlerd whitlerd     21391 Mar 26 20:52 stderr.txt
[2026-03-26 20:52:12] HITS file was successfully produced:
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd 207774857 Mar 26 20:50 shared/HITS.pool.root.1
[2026-03-26 20:52:12]  *** Contents of shared directory: ***
[2026-03-26 20:52:12] total 434868
[2026-03-26 20:52:12] -rw-r--r-- 2 whitlerd whitlerd 234813182 Mar 26 17:34 ATLAS.root_0
[2026-03-26 20:52:12] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 26 17:34 start_atlas.sh
[2026-03-26 20:52:12] -rw-r--r-- 2 whitlerd whitlerd    597546 Mar 26 17:34 input.tar.gz
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd 207774857 Mar 26 20:50 HITS.pool.root.1
[2026-03-26 20:52:12] -rw------- 1 whitlerd whitlerd   2088960 Mar 26 20:52 result.tar.gz
20:52:13 (394634): run_atlas exited; CPU time 46334.119778
20:52:13 (394634): called boinc_finish(0)

</stderr_txt>
]]>

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