Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:21:49 (18462): wrapper (7.7.26015): starting
17:21:49 (18462): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 17:21:49] Arguments: --nthreads 8
[2026-03-26 17:21:49] Threads: 8
[2026-03-26 17:21:49] Checking for CVMFS
[2026-03-26 17:21:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 17:21:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 17:21:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 17:21:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 17:21:49] 2.11.2.0 2871 7610 80396 157734 3 1 11151734 20275201 1 130560 0 1192941 99.581 544039 3102 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-26 17:21:49] CVMFS is ok
[2026-03-26 17:21:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 17:21:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 17:21:49] Further information can be found at the LHC@home message board.
[2026-03-26 17:21:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 17:21:49] Checking for apptainer binary...
[2026-03-26 17:21:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 17:21:49] Running /usr/bin/apptainer --version
[2026-03-26 17:21:49] apptainer version 1.3.2-1.el7
[2026-03-26 17:21:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 17:21:51] c-204-6.aglt2.org
[2026-03-26 17:21:51] apptainer works
[2026-03-26 17:21:51] Set ATHENA_PROC_NUMBER=8
[2026-03-26 17:21:51] Set ATHENA_CORE_NUMBER=8
[2026-03-26 17:21:51] Starting ATLAS job with PandaID=7058702454
[2026-03-26 17:21:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:49:21 (6679): wrapper (7.7.26015): starting
17:49:21 (6679): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 17:49:21] Arguments: --nthreads 8
[2026-03-26 17:49:21] Threads: 8
[2026-03-26 17:49:21] This job has been restarted, cleaning up previous attempt
[2026-03-26 17:49:21] Checking for CVMFS
[2026-03-26 17:49:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 17:49:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 17:49:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 17:49:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 17:49:22] 2.11.2.0 2871 7638 72432 157734 3 188 11195804 20275200 1 130560 0 1258250 99.601 545569 3110 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-26 17:49:22] CVMFS is ok
[2026-03-26 17:49:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 17:49:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 17:49:22] Further information can be found at the LHC@home message board.
[2026-03-26 17:49:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 17:49:22] Checking for apptainer binary...
[2026-03-26 17:49:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 17:49:22] Running /usr/bin/apptainer --version
[2026-03-26 17:49:22] apptainer version 1.3.2-1.el7
[2026-03-26 17:49:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 17:49:24] c-204-6.aglt2.org
[2026-03-26 17:49:24] apptainer works
[2026-03-26 17:49:24] Set ATHENA_PROC_NUMBER=8
[2026-03-26 17:49:24] Set ATHENA_CORE_NUMBER=8
[2026-03-26 17:49:24] Starting ATLAS job with PandaID=7058702454
[2026-03-26 17:49:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 21:56:13]  *** The last 200 lines of the pilot log: ***
[2026-03-26 21:56:13] 2026-03-27 01:55:35,647 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7058702454/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,647 | INFO     | extracted standard info from prmon json
[2026-03-26 21:56:13] 2026-03-27 01:55:35,648 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 21:56:13] 2026-03-27 01:55:35,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 21:56:13] 2026-03-27 01:55:35,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 21:56:13] 2026-03-27 01:55:35,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 21:56:13] 2026-03-27 01:55:35,653 | INFO     | fitting pss+swap vs Time
[2026-03-26 21:56:13] 2026-03-27 01:55:35,654 | INFO     | sum of square deviations: 4394577280.5
[2026-03-26 21:56:13] 2026-03-27 01:55:35,662 | INFO     | sum of deviations: -673339746.5000076
[2026-03-26 21:56:13] 2026-03-27 01:55:35,662 | INFO     | mean x: 1774569166.5
[2026-03-26 21:56:13] 2026-03-27 01:55:35,662 | INFO     | mean y: 2500514.119834711
[2026-03-26 21:56:13] 2026-03-27 01:55:35,663 | INFO     | intersect: 274401058.0060238
[2026-03-26 21:56:13] 2026-03-27 01:55:35,663 | INFO     | chi2: 2.336287827279893
[2026-03-26 21:56:13] 2026-03-27 01:55:35,664 | INFO     | sum of square deviations: 4127772278.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,665 | INFO     | sum of deviations: 15272978456.000006
[2026-03-26 21:56:13] 2026-03-27 01:55:35,665 | INFO     | mean x: 1774569014.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,666 | INFO     | mean y: 2509474.611814346
[2026-03-26 21:56:13] 2026-03-27 01:55:35,666 | INFO     | intersect: -6563490898.993867
[2026-03-26 21:56:13] 2026-03-27 01:55:35,666 | INFO     | chi2: 1.5662435936239552
[2026-03-26 21:56:13] 2026-03-27 01:55:35,666 | INFO     | current chi2=1.5662435936239552 (change=32.96016118666721 %)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,667 | INFO     | sum of square deviations: 3871990738.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,668 | INFO     | sum of deviations: 14855488813.500008
[2026-03-26 21:56:13] 2026-03-27 01:55:35,669 | INFO     | mean x: 1774568861.5
[2026-03-26 21:56:13] 2026-03-27 01:55:35,669 | INFO     | mean y: 2509225.668103448
[2026-03-26 21:56:13] 2026-03-27 01:55:35,669 | INFO     | intersect: -6805897522.849976
[2026-03-26 21:56:13] 2026-03-27 01:55:35,669 | INFO     | chi2: 1.566839130324186
[2026-03-26 21:56:13] 2026-03-27 01:55:35,669 | INFO     | current chi2=1.566839130324186 (change=-0.038023248915762836 %)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,670 | INFO     | right removable region: 231
[2026-03-26 21:56:13] 2026-03-27 01:55:35,670 | INFO     | sum of square deviations: 4127772278.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,672 | INFO     | sum of deviations: -36248596141.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,672 | INFO     | mean x: 1774569319.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,672 | INFO     | mean y: 2520644.535864979
[2026-03-26 21:56:13] 2026-03-27 01:55:35,672 | INFO     | intersect: 15586143537.562235
[2026-03-26 21:56:13] 2026-03-27 01:55:35,672 | INFO     | chi2: 0.9297105281344327
[2026-03-26 21:56:13] 2026-03-27 01:55:35,673 | INFO     | current chi2=0.9297105281344327 (change=60.20565114971808 %)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,673 | INFO     | sum of square deviations: 3871990738.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,674 | INFO     | sum of deviations: -36005674255.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,675 | INFO     | mean x: 1774569471.5
[2026-03-26 21:56:13] 2026-03-27 01:55:35,675 | INFO     | mean y: 2520468.9137931033
[2026-03-26 21:56:13] 2026-03-27 01:55:35,675 | INFO     | intersect: 16504256825.519846
[2026-03-26 21:56:13] 2026-03-27 01:55:35,675 | INFO     | chi2: 0.914503486768377
[2026-03-26 21:56:13] 2026-03-27 01:55:35,676 | INFO     | current chi2=0.914503486768377 (change=1.635674858557349 %)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,676 | INFO     | left removable region: 20
[2026-03-26 21:56:13] 2026-03-27 01:55:35,676 | INFO     | sum of square deviations: 2912836010.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,678 | INFO     | sum of deviations: -5573599402.000002
[2026-03-26 21:56:13] 2026-03-27 01:55:35,678 | INFO     | mean x: 1774569441.0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,678 | INFO     | mean y: 2520624.625592417
[2026-03-26 21:56:13] 2026-03-27 01:55:35,678 | INFO     | intersect: 3398090832.2203126
[2026-03-26 21:56:13] 2026-03-27 01:55:35,679 | INFO     | chi2: 0.07207896804123871
[2026-03-26 21:56:13] 2026-03-27 01:55:35,679 | INFO     | current memory leak: -1.91 B/s (using 211 data points, chi2=0.07)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,679 | INFO     | could have reported an average CPU frequency of 1762 MHz (12 samples)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,680 | INFO     | ..............................
[2026-03-26 21:56:13] 2026-03-27 01:55:35,680 | INFO     | . Timing measurements:
[2026-03-26 21:56:13] 2026-03-27 01:55:35,680 | INFO     | . get job = 0 s
[2026-03-26 21:56:13] 2026-03-27 01:55:35,680 | INFO     | . initial setup = 1 s
[2026-03-26 21:56:13] 2026-03-27 01:55:35,680 | INFO     | . payload setup = 16 s
[2026-03-26 21:56:13] 2026-03-27 01:55:35,680 | INFO     | . stage-in = 0 s
[2026-03-26 21:56:13] 2026-03-27 01:55:35,681 | INFO     | . payload execution = 14718 s
[2026-03-26 21:56:13] 2026-03-27 01:55:35,681 | INFO     | . stage-out = 2 s
[2026-03-26 21:56:13] 2026-03-27 01:55:35,681 | INFO     | . log creation = 0 s
[2026-03-26 21:56:13] 2026-03-27 01:55:35,681 | INFO     | ..............................
[2026-03-26 21:56:13] 2026-03-27 01:55:35,776 | INFO     | 
[2026-03-26 21:56:13] 2026-03-27 01:55:35,777 | INFO     | job summary report
[2026-03-26 21:56:13] 2026-03-27 01:55:35,777 | INFO     | --------------------------------------------------
[2026-03-26 21:56:13] 2026-03-27 01:55:35,777 | INFO     | PanDA job id: 7058702454
[2026-03-26 21:56:13] 2026-03-27 01:55:35,777 | INFO     | task id: 49176710
[2026-03-26 21:56:13] 2026-03-27 01:55:35,777 | INFO     | errors: (none)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,778 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 21:56:13] 2026-03-27 01:55:35,778 | INFO     | pilot state: finished 
[2026-03-26 21:56:13] 2026-03-27 01:55:35,778 | INFO     | transexitcode: 0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,778 | INFO     | exeerrorcode: 0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,778 | INFO     | exeerrordiag: 
[2026-03-26 21:56:13] 2026-03-27 01:55:35,779 | INFO     | exitcode: 0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,779 | INFO     | exitmsg: OK
[2026-03-26 21:56:13] 2026-03-27 01:55:35,779 | INFO     | cpuconsumptiontime: 112048 s
[2026-03-26 21:56:13] 2026-03-27 01:55:35,779 | INFO     | nevents: 400
[2026-03-26 21:56:13] 2026-03-27 01:55:35,779 | INFO     | neventsw: 0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,779 | INFO     | pid: 14146
[2026-03-26 21:56:13] 2026-03-27 01:55:35,780 | INFO     | pgrp: 14146
[2026-03-26 21:56:13] 2026-03-27 01:55:35,780 | INFO     | corecount: 8
[2026-03-26 21:56:13] 2026-03-27 01:55:35,780 | INFO     | event service: False
[2026-03-26 21:56:13] 2026-03-27 01:55:35,780 | INFO     | sizes: {0: 2280038, 1: 2280215, 11: 2280215, 14738: 2311187, 14742: 2320379}
[2026-03-26 21:56:13] 2026-03-27 01:55:35,780 | INFO     | --------------------------------------------------
[2026-03-26 21:56:13] 2026-03-27 01:55:35,781 | INFO     | 
[2026-03-26 21:56:13] 2026-03-27 01:55:35,781 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-26 21:56:13] 2026-03-27 01:55:35,811 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,812 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,812 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,813 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,815 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,816 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 21:56:13] 2026-03-27 01:55:35,816 | INFO     | job 7058702454 has completed (purged errors)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,816 | INFO     | overall cleanup function is called
[2026-03-26 21:56:13] 2026-03-27 01:55:35,833 | WARNING  | process 14146 can no longer be monitored (due to stat problems) - aborting
[2026-03-26 21:56:13] 2026-03-27 01:55:35,910 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 21:56:13] 2026-03-27 01:55:35,999 | INFO     | number of running child processes to parent process 14146: 1
[2026-03-26 21:56:13] 2026-03-27 01:55:35,999 | INFO     | maximum number of monitored processes: 6
[2026-03-26 21:56:13] 2026-03-27 01:55:35,999 | INFO     | aborting job monitoring since job object (job id=7058702454) has expired
[2026-03-26 21:56:13] 2026-03-27 01:55:36,825 | INFO     | --- collectZombieJob: --- 10, [14146]
[2026-03-26 21:56:13] 2026-03-27 01:55:36,825 | INFO     | zombie collector waiting for pid 14146
[2026-03-26 21:56:13] 2026-03-27 01:55:36,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 21:56:13] 2026-03-27 01:55:36,826 | INFO     | collected zombie processes
[2026-03-26 21:56:13] 2026-03-27 01:55:36,826 | INFO     | will attempt to kill all subprocesses of pid=14146
[2026-03-26 21:56:13] 2026-03-27 01:55:36,919 | INFO     | process IDs to be killed: [14146] (in reverse order)
[2026-03-26 21:56:13] 2026-03-27 01:55:36,981 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 21:56:13] 2026-03-27 01:55:36,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 21:56:13] 2026-03-27 01:55:36,985 | INFO     | did not find any defunct processes belonging to 14146
[2026-03-26 21:56:13] 2026-03-27 01:55:36,988 | INFO     | did not find any defunct processes belonging to 14146
[2026-03-26 21:56:13] 2026-03-27 01:55:36,989 | INFO     | ready for new job
[2026-03-26 21:56:13] 2026-03-27 01:55:36,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 21:56:13] 2026-03-27 01:55:36,991 | INFO     | **************************************
[2026-03-26 21:56:13] 2026-03-27 01:55:36,991 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 21:56:13] 2026-03-27 01:55:36,991 | INFO     | **************************************
[2026-03-26 21:56:13] 2026-03-27 01:55:36,991 | INFO     | 
[2026-03-26 21:56:13] 2026-03-27 01:55:36,992 | INFO     | architecture information:
[2026-03-26 21:56:13] 2026-03-27 01:55:36,993 | INFO     | executing command: cat /etc/os-release
[2026-03-26 21:56:13] 2026-03-27 01:55:37,012 | INFO     | cat /etc/os-release:
[2026-03-26 21:56:13] NAME="CentOS Linux"
[2026-03-26 21:56:13] VERSION="7 (Core)"
[2026-03-26 21:56:13] ID="centos"
[2026-03-26 21:56:13] ID_LIKE="rhel fedora"
[2026-03-26 21:56:13] VERSION_ID="7"
[2026-03-26 21:56:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 21:56:13] ANSI_COLOR="0;31"
[2026-03-26 21:56:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 21:56:13] HOME_URL="https://www.centos.org/"
[2026-03-26 21:56:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 21:56:13] 
[2026-03-26 21:56:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 21:56:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 21:56:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 21:56:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 21:56:13] 
[2026-03-26 21:56:13] 2026-03-27 01:55:37,012 | INFO     | **************************************
[2026-03-26 21:56:13] 2026-03-27 01:55:37,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-26 21:56:13] 2026-03-27 01:55:37,534 | INFO     | sufficient remaining disk space (18492686336 B)
[2026-03-26 21:56:13] 2026-03-27 01:55:37,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 21:56:13] 2026-03-27 01:55:37,534 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 21:56:13] 2026-03-27 01:55:37,535 | INFO     | update_server=False
[2026-03-26 21:56:13] 2026-03-27 01:55:37,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 21:56:13] 2026-03-27 01:55:37,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 21:56:13] 2026-03-27 01:55:37,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 21:56:13] 2026-03-27 01:55:37,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 21:56:13] 2026-03-27 01:55:37,536 | INFO     | aborting loop
[2026-03-26 21:56:13] 2026-03-27 01:55:37,643 | INFO     | all data control threads have been joined
[2026-03-26 21:56:13] 2026-03-27 01:55:38,413 | INFO     | all job control threads have been joined
[2026-03-26 21:56:13] 2026-03-27 01:55:38,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 21:56:13] 2026-03-27 01:55:38,541 | INFO     | [job] retrieve thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:38,541 | INFO     | [job] job monitor thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:38,542 | INFO     | [job] queue monitor thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:38,610 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:38,633 | INFO     | all payload control threads have been joined
[2026-03-26 21:56:13] 2026-03-27 01:55:38,649 | INFO     | [data] control thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:38,787 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:38,799 | INFO     | [payload] failed_post thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:39,227 | INFO     | [data] copytool_in thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:39,420 | INFO     | [job] control thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:39,429 | INFO     | [payload] validate_post thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:39,626 | INFO     | [job] validate thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:39,638 | INFO     | [payload] control thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:39,834 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:39,845 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:40,467 | INFO     | [data] copytool_out thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:55:41,543 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 21:56:13] 2026-03-27 01:56:06,200 | INFO     | [monitor] cgroup control has ended
[2026-03-26 21:56:13] 2026-03-27 01:56:07,561 | INFO     | PID=10685 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-26 21:56:13] 2026-03-27 01:56:07,561 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 21:56:13] 2026-03-27 01:56:07,562 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 21:56:13] 2026-03-27 01:56:07,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 21:56:13] 2026-03-27 01:56:08,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513924179776)>', '<ExcThread(monitor, started 140513260852992)>']
[2026-03-26 21:56:13] 2026-03-27 01:56:08,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 21:56:13] 2026-03-27 01:56:08,565 | INFO     | [monitor] control thread has ended
[2026-03-26 21:56:13] 2026-03-27 01:56:13,119 | INFO     | all workflow threads have been joined
[2026-03-26 21:56:13] 2026-03-27 01:56:13,120 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 21:56:13] 2026-03-27 01:56:13,120 | INFO     | traces error code: 0
[2026-03-26 21:56:13] 2026-03-27 01:56:13,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 21:56:13] 2026-03-27 01:56:13,236 [wrapper] ==== pilot stdout END ====
[2026-03-26 21:56:13] 2026-03-27 01:56:13,241 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 21:56:13] 2026-03-27 01:56:13,245 [wrapper] pilotpid: 10685
[2026-03-26 21:56:13] 2026-03-27 01:56:13,249 [wrapper] Pilot exit status: 0
[2026-03-26 21:56:13] 2026-03-27 01:56:13,265 [wrapper] pandaids: 7058702454 7058702454
[2026-03-26 21:56:13] 2026-03-27 01:56:13,310 [wrapper] cleanup supervisor_pilot 31749 10686
[2026-03-26 21:56:13] 2026-03-27 01:56:13,314 [wrapper] Test setup, not cleaning
[2026-03-26 21:56:13] 2026-03-27 01:56:13,318 [wrapper] apfmon messages muted
[2026-03-26 21:56:13] 2026-03-27 01:56:13,322 [wrapper] ==== wrapper stdout END ====
[2026-03-26 21:56:13] 2026-03-27 01:56:13,325 [wrapper] ==== wrapper stderr END ====
[2026-03-26 21:56:13]  *** Error codes and diagnostics ***
[2026-03-26 21:56:13]     "exeErrorCode": 0,
[2026-03-26 21:56:13]     "exeErrorDiag": "",
[2026-03-26 21:56:13]     "pilotErrorCode": 0,
[2026-03-26 21:56:13]     "pilotErrorDiag": "",
[2026-03-26 21:56:13]  *** Listing of results directory ***
[2026-03-26 21:56:13] total 687324
[2026-03-26 21:56:13] drwx------ 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas    585013 Mar 18 09:20 pilot3.tar.gz
[2026-03-26 21:56:13] -rwx------ 1 boincer umatlas     36322 Mar 18 09:23 runpilot2-wrapper.sh
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas      5111 Mar 18 09:28 queuedata.json
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas       100 Mar 26 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 21:56:13] -rwxr-xr-x 1 boincer umatlas      7986 Mar 26 17:21 run_atlas
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas       105 Mar 26 17:21 job.xml
[2026-03-26 21:56:13] -rw-r--r-- 3 boincer umatlas 242169531 Mar 26 17:21 EVNT.49134939._000009.pool.root.1
[2026-03-26 21:56:13] -rw-r--r-- 3 boincer umatlas 242169531 Mar 26 17:21 ATLAS.root_0
[2026-03-26 21:56:13] -rw-r--r-- 2 boincer umatlas     15845 Mar 26 17:21 start_atlas.sh
[2026-03-26 21:56:13] drwxrwx--x 2 boincer umatlas      4096 Mar 26 17:21 shared
[2026-03-26 21:56:13] -rw-r--r-- 2 boincer umatlas    597547 Mar 26 17:21 input.tar.gz
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas         0 Mar 26 17:21 boinc_lockfile
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas      2604 Mar 26 17:49 pandaJob.out
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas        57 Mar 26 17:49 setup.sh.local
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas   1012352 Mar 26 17:49 agis_schedconf.cvmfs.json
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas       430 Mar 26 17:49 workernode_map.json
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas      5910 Mar 26 21:47 init_data.xml
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas 210494199 Mar 26 21:54 HITS.49176710._000216.pool.root.1
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas       531 Mar 26 21:55 boinc_task_state.xml
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas        96 Mar 26 21:55 pilot_heartbeat.json
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas      1061 Mar 26 21:55 memory_monitor_summary.json
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas   1511579 Mar 26 21:55 agis_ddmendpoints.agis.ALL.json
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas    474823 Mar 26 21:55 log.49176710._000216.job.log.tgz.1
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas      6407 Mar 26 21:55 heartbeat.json
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas        29 Mar 26 21:56 wrapper_checkpoint.txt
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas      8192 Mar 26 21:56 boinc_mmap_file
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas      4742 Mar 26 21:56 pilotlog.txt
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas   2040440 Mar 26 21:56 log.49176710._000216.job.log.1
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas       357 Mar 26 21:56 output.list
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas       620 Mar 26 21:56 runtime_log
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas   2529280 Mar 26 21:56 result.tar.gz
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas      9422 Mar 26 21:56 runtime_log.err
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas       787 Mar 26 21:56 gzMNDmT35M9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxG2LDmGXXEMm.diag
[2026-03-26 21:56:13] -rw-r--r-- 1 boincer umatlas     23216 Mar 26 21:56 stderr.txt
[2026-03-26 21:56:13] HITS file was successfully produced:
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas 210494199 Mar 26 21:54 shared/HITS.pool.root.1
[2026-03-26 21:56:13]  *** Contents of shared directory: ***
[2026-03-26 21:56:13] total 445140
[2026-03-26 21:56:13] -rw-r--r-- 3 boincer umatlas 242169531 Mar 26 17:21 ATLAS.root_0
[2026-03-26 21:56:13] -rw-r--r-- 2 boincer umatlas     15845 Mar 26 17:21 start_atlas.sh
[2026-03-26 21:56:13] -rw-r--r-- 2 boincer umatlas    597547 Mar 26 17:21 input.tar.gz
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas 210494199 Mar 26 21:54 HITS.pool.root.1
[2026-03-26 21:56:13] -rw------- 1 boincer umatlas   2529280 Mar 26 21:56 result.tar.gz
21:56:14 (6679): run_atlas exited; CPU time 111858.972231
21:56:14 (6679): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN