Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:23:40 (435305): wrapper (7.7.26015): starting
21:23:40 (435305): wrapper: running run_atlas (--nthreads 12)
[2026-04-01 21:23:40] Arguments: --nthreads 12
[2026-04-01 21:23:40] Threads: 12
[2026-04-01 21:23:40] Checking for CVMFS
[2026-04-01 21:23:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-01 21:23:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-01 21:23:40] Running cvmfs_config stat atlas.cern.ch
[2026-04-01 21:23:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-01 21:23:41] 2.13.3.0 3021178 10970 77516 157972 2 228 3308897 4096000 17521 130560 0 49007595 99.980 788495 2050 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-01 21:23:41] CVMFS is ok
[2026-04-01 21:23:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 21:23:41] Checking for apptainer binary...
[2026-04-01 21:23:41] apptainer is not installed, using version from CVMFS
[2026-04-01 21:23:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 21:23:43] epyc7v12
[2026-04-01 21:23:43] apptainer works
[2026-04-01 21:23:43] Set ATHENA_PROC_NUMBER=12
[2026-04-01 21:23:43] Set ATHENA_CORE_NUMBER=12
[2026-04-01 21:23:43] Starting ATLAS job with PandaID=7058599903
[2026-04-01 21:23:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31429/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 00:57:56]  *** The last 200 lines of the pilot log: ***
[2026-04-02 00:57:56] 2026-04-02 00:56:57,684 | INFO     | extracted standard memory fields from prmon json
[2026-04-02 00:57:56] 2026-04-02 00:56:57,685 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-02 00:57:56] 2026-04-02 00:56:57,690 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-02 00:57:56] 2026-04-02 00:56:57,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-02 00:57:56] 2026-04-02 00:56:57,703 | INFO     | fitting pss+swap vs Time
[2026-04-02 00:57:56] 2026-04-02 00:56:57,703 | INFO     | sum of square deviations: 2830766490.9569297
[2026-04-02 00:57:56] 2026-04-02 00:56:57,705 | INFO     | sum of deviations: 49478612231.373184
[2026-04-02 00:57:56] 2026-04-02 00:56:57,711 | INFO     | mean x: 1775085051.014354
[2026-04-02 00:57:56] 2026-04-02 00:56:57,711 | INFO     | mean y: 2639969.875598086
[2026-04-02 00:57:56] 2026-04-02 00:56:57,711 | INFO     | intersect: -31023848861.831726
[2026-04-02 00:57:56] 2026-04-02 00:56:57,712 | INFO     | chi2: 2.9163020968892446
[2026-04-02 00:57:56] 2026-04-02 00:56:57,716 | INFO     | sum of square deviations: 2632419500.955879
[2026-04-02 00:57:56] 2026-04-02 00:56:57,718 | INFO     | sum of deviations: 63453339396.911766
[2026-04-02 00:57:56] 2026-04-02 00:56:57,718 | INFO     | mean x: 1775084898.514706
[2026-04-02 00:57:56] 2026-04-02 00:56:57,718 | INFO     | mean y: 2650483.029411765
[2026-04-02 00:57:56] 2026-04-02 00:56:57,718 | INFO     | intersect: -42785007214.72221
[2026-04-02 00:57:56] 2026-04-02 00:56:57,719 | INFO     | chi2: 2.083529302153464
[2026-04-02 00:57:56] 2026-04-02 00:56:57,719 | INFO     | current chi2=2.083529302153464 (change=28.555779444937514 %)
[2026-04-02 00:57:56] 2026-04-02 00:56:57,721 | INFO     | sum of square deviations: 2443561060.954766
[2026-04-02 00:57:56] 2026-04-02 00:56:57,723 | INFO     | sum of deviations: 61686848885.040215
[2026-04-02 00:57:56] 2026-04-02 00:56:57,723 | INFO     | mean x: 1775084746.0150754
[2026-04-02 00:57:56] 2026-04-02 00:56:57,723 | INFO     | mean y: 2649056.6532663316
[2026-04-02 00:57:56] 2026-04-02 00:56:57,723 | INFO     | intersect: -44808747816.231735
[2026-04-02 00:57:56] 2026-04-02 00:56:57,723 | INFO     | chi2: 2.0832979456246856
[2026-04-02 00:57:56] 2026-04-02 00:56:57,723 | INFO     | current chi2=2.0832979456246856 (change=0.011104068876749092 %)
[2026-04-02 00:57:56] 2026-04-02 00:56:57,723 | INFO     | right removable region: 198
[2026-04-02 00:57:56] 2026-04-02 00:56:57,724 | INFO     | sum of square deviations: 2632417670.955879
[2026-04-02 00:57:56] 2026-04-02 00:56:57,727 | INFO     | sum of deviations: 4627381470.882341
[2026-04-02 00:57:56] 2026-04-02 00:56:57,727 | INFO     | mean x: 1775085203.514706
[2026-04-02 00:57:56] 2026-04-02 00:56:57,727 | INFO     | mean y: 2674212.0392156863
[2026-04-02 00:57:56] 2026-04-02 00:56:57,728 | INFO     | intersect: -3117649918.3632016
[2026-04-02 00:57:56] 2026-04-02 00:56:57,730 | INFO     | chi2: 1.066863213300019
[2026-04-02 00:57:56] 2026-04-02 00:56:57,730 | INFO     | current chi2=1.066863213300019 (change=63.41726001438539 %)
[2026-04-02 00:57:56] 2026-04-02 00:56:57,730 | INFO     | sum of square deviations: 2443557400.954766
[2026-04-02 00:57:56] 2026-04-02 00:56:57,735 | INFO     | sum of deviations: -7048804447.30653
[2026-04-02 00:57:56] 2026-04-02 00:56:57,735 | INFO     | mean x: 1775085356.0150754
[2026-04-02 00:57:56] 2026-04-02 00:56:57,735 | INFO     | mean y: 2683644.7688442213
[2026-04-02 00:57:56] 2026-04-02 00:56:57,735 | INFO     | intersect: 5123181140.321387
[2026-04-02 00:57:56] 2026-04-02 00:56:57,735 | INFO     | chi2: 0.9718242465867435
[2026-04-02 00:57:56] 2026-04-02 00:56:57,736 | INFO     | current chi2=0.9718242465867435 (change=8.908261671081643 %)
[2026-04-02 00:57:56] 2026-04-02 00:56:57,736 | INFO     | left removable region: 20
[2026-04-02 00:57:56] 2026-04-02 00:56:57,736 | INFO     | sum of square deviations: 1748726194.4775317
[2026-04-02 00:57:56] 2026-04-02 00:56:57,737 | INFO     | sum of deviations: -2379359303.5112348
[2026-04-02 00:57:56] 2026-04-02 00:56:57,737 | INFO     | mean x: 1775085325.511236
[2026-04-02 00:57:56] 2026-04-02 00:56:57,737 | INFO     | mean y: 2704497.0056179776
[2026-04-02 00:57:56] 2026-04-02 00:56:57,738 | INFO     | intersect: 2417928673.9633527
[2026-04-02 00:57:56] 2026-04-02 00:56:57,742 | INFO     | chi2: 0.006599611587700859
[2026-04-02 00:57:56] 2026-04-02 00:56:57,742 | INFO     | current memory leak: -1.36 B/s (using 178 data points, chi2=0.01)
[2026-04-02 00:57:56] 2026-04-02 00:56:57,743 | INFO     | could have reported an average CPU frequency of 2379 MHz (11 samples)
[2026-04-02 00:57:56] 2026-04-02 00:56:57,743 | INFO     | ..............................
[2026-04-02 00:57:56] 2026-04-02 00:56:57,743 | INFO     | . Timing measurements:
[2026-04-02 00:57:56] 2026-04-02 00:56:57,743 | INFO     | . get job = 0 s
[2026-04-02 00:57:56] 2026-04-02 00:56:57,743 | INFO     | . initial setup = 15 s
[2026-04-02 00:57:56] 2026-04-02 00:56:57,743 | INFO     | . payload setup = 24 s
[2026-04-02 00:57:56] 2026-04-02 00:56:57,743 | INFO     | . stage-in = 0 s
[2026-04-02 00:57:56] 2026-04-02 00:56:57,743 | INFO     | . payload execution = 12716 s
[2026-04-02 00:57:56] 2026-04-02 00:56:57,743 | INFO     | . stage-out = 2 s
[2026-04-02 00:57:56] 2026-04-02 00:56:57,744 | INFO     | . log creation = 0 s
[2026-04-02 00:57:56] 2026-04-02 00:56:57,744 | INFO     | ..............................
[2026-04-02 00:57:56] 2026-04-02 00:56:57,973 | INFO     | 
[2026-04-02 00:57:56] 2026-04-02 00:56:57,973 | INFO     | job summary report
[2026-04-02 00:57:56] 2026-04-02 00:56:57,973 | INFO     | --------------------------------------------------
[2026-04-02 00:57:56] 2026-04-02 00:56:57,973 | INFO     | PanDA job id: 7058599903
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | task id: 49190001
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | errors: (none)
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | pilot state: finished 
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | transexitcode: 0
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | exeerrorcode: 0
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | exeerrordiag: 
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | exitcode: 0
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | exitmsg: OK
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | cpuconsumptiontime: 74914 s
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | nevents: 400
[2026-04-02 00:57:56] 2026-04-02 00:56:57,974 | INFO     | neventsw: 0
[2026-04-02 00:57:56] 2026-04-02 00:56:57,975 | INFO     | pid: 444494
[2026-04-02 00:57:56] 2026-04-02 00:56:57,975 | INFO     | pgrp: 444494
[2026-04-02 00:57:56] 2026-04-02 00:56:57,975 | INFO     | corecount: 12
[2026-04-02 00:57:56] 2026-04-02 00:56:57,975 | INFO     | event service: False
[2026-04-02 00:57:56] 2026-04-02 00:56:57,975 | INFO     | sizes: {0: 2279129, 1: 2279837, 2: 2280241, 12742: 2310499, 12745: 2319543, 12746: 2319599, 12748: 2319921}
[2026-04-02 00:57:56] 2026-04-02 00:56:57,975 | INFO     | --------------------------------------------------
[2026-04-02 00:57:56] 2026-04-02 00:56:57,975 | INFO     | 
[2026-04-02 00:57:56] 2026-04-02 00:56:57,975 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31429/slots/0
[2026-04-02 00:57:56] 2026-04-02 00:56:58,032 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,032 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,032 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,032 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,032 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,036 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-02 00:57:56] 2026-04-02 00:56:58,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,039 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-02 00:57:56] 2026-04-02 00:56:58,039 | INFO     | job 7058599903 has completed (purged errors)
[2026-04-02 00:57:56] 2026-04-02 00:56:58,039 | INFO     | overall cleanup function is called
[2026-04-02 00:57:56] 2026-04-02 00:56:59,054 | INFO     | --- collectZombieJob: --- 10, [444494]
[2026-04-02 00:57:56] 2026-04-02 00:56:59,054 | INFO     | zombie collector waiting for pid 444494
[2026-04-02 00:57:56] 2026-04-02 00:56:59,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-02 00:57:56] 2026-04-02 00:56:59,055 | INFO     | collected zombie processes
[2026-04-02 00:57:56] 2026-04-02 00:56:59,055 | INFO     | will attempt to kill all subprocesses of pid=444494
[2026-04-02 00:57:56] 2026-04-02 00:57:00,153 | INFO     | process IDs to be killed: [444494] (in reverse order)
[2026-04-02 00:57:56] 2026-04-02 00:57:00,624 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 00:57:56] 2026-04-02 00:57:00,627 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 00:57:56] 2026-04-02 00:57:00,684 | INFO     | did not find any defunct processes belonging to 444494
[2026-04-02 00:57:56] 2026-04-02 00:57:00,719 | INFO     | did not find any defunct processes belonging to 444494
[2026-04-02 00:57:56] 2026-04-02 00:57:00,721 | INFO     | ready for new job
[2026-04-02 00:57:56] 2026-04-02 00:57:00,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-02 00:57:56] 2026-04-02 00:57:00,724 | INFO     | **************************************
[2026-04-02 00:57:56] 2026-04-02 00:57:00,724 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-02 00:57:56] 2026-04-02 00:57:00,727 | INFO     | **************************************
[2026-04-02 00:57:56] 2026-04-02 00:57:00,727 | INFO     | 
[2026-04-02 00:57:56] 2026-04-02 00:57:00,745 | INFO     | architecture information:
[2026-04-02 00:57:56] 2026-04-02 00:57:00,752 | INFO     | executing command: cat /etc/os-release
[2026-04-02 00:57:56] 2026-04-02 00:57:00,799 | INFO     | cat /etc/os-release:
[2026-04-02 00:57:56] NAME="CentOS Linux"
[2026-04-02 00:57:56] VERSION="7 (Core)"
[2026-04-02 00:57:56] ID="centos"
[2026-04-02 00:57:56] ID_LIKE="rhel fedora"
[2026-04-02 00:57:56] VERSION_ID="7"
[2026-04-02 00:57:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 00:57:56] ANSI_COLOR="0;31"
[2026-04-02 00:57:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 00:57:56] HOME_URL="https://www.centos.org/"
[2026-04-02 00:57:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 00:57:56] 
[2026-04-02 00:57:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 00:57:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 00:57:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 00:57:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 00:57:56] 
[2026-04-02 00:57:56] 2026-04-02 00:57:00,801 | INFO     | **************************************
[2026-04-02 00:57:56] 2026-04-02 00:57:01,303 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31429/slots/0
[2026-04-02 00:57:56] 2026-04-02 00:57:01,352 | INFO     | sufficient remaining disk space (270521073664 B)
[2026-04-02 00:57:56] 2026-04-02 00:57:01,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 00:57:56] 2026-04-02 00:57:01,353 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 00:57:56] 2026-04-02 00:57:01,353 | INFO     | update_server=False
[2026-04-02 00:57:56] 2026-04-02 00:57:01,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-02 00:57:56] 2026-04-02 00:57:01,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 00:57:56] 2026-04-02 00:57:01,544 | WARNING  | process 444494 can no longer be monitored (due to stat problems) - aborting
[2026-04-02 00:57:56] 2026-04-02 00:57:01,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 00:57:56] 2026-04-02 00:57:01,872 | INFO     | all job control threads have been joined
[2026-04-02 00:57:56] 2026-04-02 00:57:02,154 | INFO     | all data control threads have been joined
[2026-04-02 00:57:56] 2026-04-02 00:57:02,206 | INFO     | using path: /opt/boinc/instance_homes/boinc_31429/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-02 00:57:56] 2026-04-02 00:57:02,361 | INFO     | [job] retrieve thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:02,452 | INFO     | all payload control threads have been joined
[2026-04-02 00:57:56] 2026-04-02 00:57:02,467 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:02,482 | INFO     | [job] validate thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:02,601 | INFO     | [payload] validate_post thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:02,861 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:02,877 | INFO     | [job] control thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:02,886 | INFO     | [payload] failed_post thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:02,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 00:57:56] 2026-04-02 00:57:03,103 | INFO     | number of running child processes to parent process 444494: 1
[2026-04-02 00:57:56] 2026-04-02 00:57:03,104 | INFO     | maximum number of monitored processes: 6
[2026-04-02 00:57:56] 2026-04-02 00:57:03,104 | INFO     | aborting job monitoring since job object (job id=7058599903) has expired
[2026-04-02 00:57:56] 2026-04-02 00:57:03,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 00:57:56] 2026-04-02 00:57:03,104 | INFO     | will abort loop
[2026-04-02 00:57:56] 2026-04-02 00:57:03,159 | INFO     | [data] control thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:03,271 | INFO     | [data] copytool_in thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:03,333 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:03,362 | INFO     | [data] copytool_out thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:03,457 | INFO     | [payload] control thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:03,994 | INFO     | [job] queue monitor thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:04,109 | INFO     | [job] job monitor thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:05,766 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:11,517 | INFO     | job.realtimelogging is not enabled
[2026-04-02 00:57:56] 2026-04-02 00:57:12,522 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 00:57:56] 2026-04-02 00:57:30,410 | INFO     | PID=439500 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-02 00:57:56] 2026-04-02 00:57:30,410 | INFO     | .. there are 20 such processes running
[2026-04-02 00:57:56] 2026-04-02 00:57:30,410 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 00:57:56] 2026-04-02 00:57:30,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 00:57:56] 2026-04-02 00:57:30,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 00:57:56] 2026-04-02 00:57:49,143 | INFO     | [monitor] cgroup control has ended
[2026-04-02 00:57:56] 2026-04-02 00:57:50,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127817828079424)>', '<ExcThread(monitor, started 127817498986240)>']
[2026-04-02 00:57:56] 2026-04-02 00:57:51,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 00:57:56] 2026-04-02 00:57:51,516 | INFO     | [monitor] control thread has ended
[2026-04-02 00:57:56] 2026-04-02 00:57:55,785 | INFO     | all workflow threads have been joined
[2026-04-02 00:57:56] 2026-04-02 00:57:55,785 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 00:57:56] 2026-04-02 00:57:55,786 | INFO     | traces error code: 0
[2026-04-02 00:57:56] 2026-04-02 00:57:55,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 00:57:56] 2026-04-02 00:57:55,963 [wrapper] ==== pilot stdout END ====
[2026-04-02 00:57:56] 2026-04-02 00:57:55,973 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 00:57:56] 2026-04-02 00:57:55,982 [wrapper] pilotpid: 439500
[2026-04-02 00:57:56] 2026-04-02 00:57:55,992 [wrapper] Pilot exit status: 0
[2026-04-02 00:57:56] 2026-04-02 00:57:56,023 [wrapper] pandaids: 7058599903
[2026-04-02 00:57:56] 2026-04-02 00:57:56,180 [wrapper] cleanup supervisor_pilot  672055 439501
[2026-04-02 00:57:56] 2026-04-02 00:57:56,192 [wrapper] Test setup, not cleaning
[2026-04-02 00:57:56] 2026-04-02 00:57:56,200 [wrapper] apfmon messages muted
[2026-04-02 00:57:56] 2026-04-02 00:57:56,211 [wrapper] ==== wrapper stdout END ====
[2026-04-02 00:57:56] 2026-04-02 00:57:56,219 [wrapper] ==== wrapper stderr END ====
[2026-04-02 00:57:56]  *** Error codes and diagnostics ***
[2026-04-02 00:57:56]     "exeErrorCode": 0,
[2026-04-02 00:57:56]     "exeErrorDiag": "",
[2026-04-02 00:57:56]     "pilotErrorCode": 0,
[2026-04-02 00:57:56]     "pilotErrorDiag": "",
[2026-04-02 00:57:56]  *** Listing of results directory ***
[2026-04-02 00:57:56] total 454572
[2026-04-02 00:57:56] -rw-r--r-- 1 boinc boinc    585013 Mar 18 08:55 pilot3.tar.gz
[2026-04-02 00:57:56] -rwx------ 1 boinc boinc     36322 Mar 18 08:55 runpilot2-wrapper.sh
[2026-04-02 00:57:56] -rw-r--r-- 1 boinc boinc      5111 Mar 18 08:56 queuedata.json
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc       100 Apr  1 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 00:57:56] -rwxr-xr-x 1 boinc boinc      7986 Apr  1 21:23 run_atlas
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc       105 Apr  1 21:23 job.xml
[2026-04-02 00:57:56] -rw-r--r-- 2 boinc boinc 252125605 Apr  1 21:23 EVNT.49121734._000001.pool.root.1
[2026-04-02 00:57:56] -rw-r--r-- 2 boinc boinc     15845 Apr  1 21:23 start_atlas.sh
[2026-04-02 00:57:56] drwxrwx--x 2 boinc boinc      4096 Apr  1 21:23 shared
[2026-04-02 00:57:56] -rw-r--r-- 2 boinc boinc    597534 Apr  1 21:23 input.tar.gz
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc      6555 Apr  1 21:23 init_data.xml
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc         0 Apr  1 21:23 boinc_setup_complete
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc         0 Apr  1 21:23 boinc_lockfile
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc      2594 Apr  1 21:23 pandaJob.out
[2026-04-02 00:57:56] -rw------- 1 boinc boinc   1005493 Apr  1 21:24 agis_schedconf.cvmfs.json
[2026-04-02 00:57:56] -rw------- 1 boinc boinc       417 Apr  1 21:24 workernode_map.json
[2026-04-02 00:57:56] drwx------ 5 boinc boinc      4096 Apr  1 21:24 pilot3
[2026-04-02 00:57:56] -rw------- 1 boinc boinc 204908340 Apr  2 00:56 HITS.49190001._000008.pool.root.1
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc       531 Apr  2 00:56 boinc_task_state.xml
[2026-04-02 00:57:56] -rw------- 1 boinc boinc        95 Apr  2 00:56 pilot_heartbeat.json
[2026-04-02 00:57:56] -rw------- 1 boinc boinc      1023 Apr  2 00:56 memory_monitor_summary.json
[2026-04-02 00:57:56] -rw------- 1 boinc boinc   1511579 Apr  2 00:56 agis_ddmendpoints.agis.ALL.json
[2026-04-02 00:57:56] -rw------- 1 boinc boinc    495078 Apr  2 00:56 log.49190001._000008.job.log.tgz.1
[2026-04-02 00:57:56] -rw------- 1 boinc boinc      6262 Apr  2 00:56 heartbeat.json
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc      8192 Apr  2 00:57 boinc_mmap_file
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc        28 Apr  2 00:57 wrapper_checkpoint.txt
[2026-04-02 00:57:56] -rw------- 1 boinc boinc      5458 Apr  2 00:57 pilotlog.txt
[2026-04-02 00:57:56] -rw------- 1 boinc boinc   1760478 Apr  2 00:57 log.49190001._000008.job.log.1
[2026-04-02 00:57:56] -rw------- 1 boinc boinc       357 Apr  2 00:57 output.list
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc       620 Apr  2 00:57 runtime_log
[2026-04-02 00:57:56] -rw------- 1 boinc boinc   2273280 Apr  2 00:57 result.tar.gz
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc      9167 Apr  2 00:57 runtime_log.err
[2026-04-02 00:57:56] -rw------- 1 boinc boinc       655 Apr  2 00:57 5OONDm6r1M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGwyLDmkOMT6n.diag
[2026-04-02 00:57:56] -rw-rw-r-- 1 boinc boinc     20944 Apr  2 00:57 stderr.txt
[2026-04-02 00:57:56] HITS file was successfully produced:
[2026-04-02 00:57:56] -rw------- 1 boinc boinc 204908340 Apr  2 00:56 shared/HITS.pool.root.1
[2026-04-02 00:57:56]  *** Contents of shared directory: ***
[2026-04-02 00:57:56] total 449156
[2026-04-02 00:57:56] -rw-r--r-- 2 boinc boinc 252125605 Apr  1 21:23 ATLAS.root_0
[2026-04-02 00:57:56] -rw-r--r-- 2 boinc boinc     15845 Apr  1 21:23 start_atlas.sh
[2026-04-02 00:57:56] -rw-r--r-- 2 boinc boinc    597534 Apr  1 21:23 input.tar.gz
[2026-04-02 00:57:56] -rw------- 1 boinc boinc 204908340 Apr  2 00:56 HITS.pool.root.1
[2026-04-02 00:57:56] -rw------- 1 boinc boinc   2273280 Apr  2 00:57 result.tar.gz
00:57:58 (435305): run_atlas exited; CPU time 75705.927066
00:57:58 (435305): called boinc_finish(0)

</stderr_txt>
]]>

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