Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
13:16:48 (191060): wrapper (7.7.26015): starting
13:16:48 (191060): wrapper: running run_atlas (--nthreads 4)
[2026-03-26 13:16:48] Arguments: --nthreads 4
[2026-03-26 13:16:48] Threads: 4
[2026-03-26 13:16:48] Checking for CVMFS
[2026-03-26 13:16:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 13:16:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 13:16:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 13:16:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 13:16:50] 2.13.3.0 77672 388 47948 157728 0 11 3648963 4096001 2748 130560 0 315149 99.987 17838 1216 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-26 13:16:50] CVMFS is ok
[2026-03-26 13:16:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 13:16:50] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-26 13:16:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-26 13:16:50] Further information can be found at the LHC@home message board.
[2026-03-26 13:16:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 13:16:50] Checking for apptainer binary...
[2026-03-26 13:16:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 13:16:50] Running /usr/bin/apptainer --version
[2026-03-26 13:16:50] apptainer version 1.4.5
[2026-03-26 13:16:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 13:16:50] P9X79
[2026-03-26 13:16:50] apptainer works
[2026-03-26 13:16:50] Set ATHENA_PROC_NUMBER=4
[2026-03-26 13:16:50] Set ATHENA_CORE_NUMBER=4
[2026-03-26 13:16:50] Starting ATLAS job with PandaID=7058496111
[2026-03-26 13:16:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-27 00:44:17]  *** The last 200 lines of the pilot log: ***
[2026-03-27 00:44:17] 2026-03-27 04:43:11,735 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-27 00:44:17] 2026-03-27 04:43:12,628 | INFO     | time since job start (41164s) is within the limit (345600.0s)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,304 | INFO     | job 7058496111 has state=finished
[2026-03-27 00:44:17] 2026-03-27 04:43:13,305 | INFO     | preparing for final server update for job 7058496111 in state='finished'
[2026-03-27 00:44:17] 2026-03-27 04:43:13,305 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/7/PanDA_Pilot-7058496111/jobReport.json
[2026-03-27 00:44:17] 2026-03-27 04:43:13,308 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/7/workernode_map.json
[2026-03-27 00:44:17] 2026-03-27 04:43:13,308 | INFO     | this job has now completed (state=finished)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,309 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,309 | INFO     | log transfer has been attempted: DONE
[2026-03-27 00:44:17] 2026-03-27 04:43:13,309 | INFO     | job 7058496111 has finished - writing final server update
[2026-03-27 00:44:17] 2026-03-27 04:43:13,309 | INFO     | total number of processed events: 400 (read)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,314 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/7/PanDA_Pilot-7058496111/memory_monitor_summary.json (trf name=prmon)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,315 | INFO     | extracted standard info from prmon json
[2026-03-27 00:44:17] 2026-03-27 04:43:13,315 | INFO     | extracted standard memory fields from prmon json
[2026-03-27 00:44:17] 2026-03-27 04:43:13,315 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-27 00:44:17] 2026-03-27 04:43:13,316 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-27 00:44:17] 2026-03-27 04:43:13,316 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-27 00:44:17] 2026-03-27 04:43:13,332 | INFO     | fitting pss+swap vs Time
[2026-03-27 00:44:17] 2026-03-27 04:43:13,333 | INFO     | sum of square deviations: 95364950850.0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,347 | INFO     | sum of deviations: -293223401122.0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,347 | INFO     | mean x: 1774566000.0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,347 | INFO     | mean y: 2357255.8918518517
[2026-03-27 00:44:17] 2026-03-27 04:43:13,348 | INFO     | intersect: 5458704408.56763
[2026-03-27 00:44:17] 2026-03-27 04:43:13,349 | INFO     | chi2: 2.848385178974768
[2026-03-27 00:44:17] 2026-03-27 04:43:13,350 | INFO     | sum of square deviations: 93261385827.5
[2026-03-27 00:44:17] 2026-03-27 04:43:13,363 | INFO     | sum of deviations: -251802549161.99988
[2026-03-27 00:44:17] 2026-03-27 04:43:13,363 | INFO     | mean x: 1774565847.5
[2026-03-27 00:44:17] 2026-03-27 04:43:13,363 | INFO     | mean y: 2360241.794029851
[2026-03-27 00:44:17] 2026-03-27 04:43:13,363 | INFO     | intersect: 4793627282.183268
[2026-03-27 00:44:17] 2026-03-27 04:43:13,364 | INFO     | chi2: 2.1822006354977175
[2026-03-27 00:44:17] 2026-03-27 04:43:13,364 | INFO     | current chi2=2.1822006354977175 (change=23.38814807753048 %)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,365 | INFO     | right removable region: 669
[2026-03-27 00:44:17] 2026-03-27 04:43:13,366 | INFO     | sum of square deviations: 93261385827.5
[2026-03-27 00:44:17] 2026-03-27 04:43:13,379 | INFO     | sum of deviations: -369701430284.99994
[2026-03-27 00:44:17] 2026-03-27 04:43:13,379 | INFO     | mean x: 1774566152.5
[2026-03-27 00:44:17] 2026-03-27 04:43:13,379 | INFO     | mean y: 2362773.9641791047
[2026-03-27 00:44:17] 2026-03-27 04:43:13,379 | INFO     | intersect: 7036996013.578198
[2026-03-27 00:44:17] 2026-03-27 04:43:13,380 | INFO     | chi2: 1.5749102973355391
[2026-03-27 00:44:17] 2026-03-27 04:43:13,380 | INFO     | current chi2=1.5749102973355391 (change=44.70866128076106 %)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,381 | INFO     | sum of square deviations: 91188984180.0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,391 | INFO     | sum of deviations: -351428283095.0001
[2026-03-27 00:44:17] 2026-03-27 04:43:13,391 | INFO     | mean x: 1774566305.0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,391 | INFO     | mean y: 2361429.254135338
[2026-03-27 00:44:17] 2026-03-27 04:43:13,391 | INFO     | intersect: 6841266319.052945
[2026-03-27 00:44:17] 2026-03-27 04:43:13,392 | INFO     | chi2: 1.5670440370761423
[2026-03-27 00:44:17] 2026-03-27 04:43:13,392 | INFO     | current chi2=1.5670440370761423 (change=0.4994735428871808 %)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,392 | INFO     | left removable region: 20
[2026-03-27 00:44:17] 2026-03-27 04:43:13,393 | INFO     | sum of square deviations: 84764007900.0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,402 | INFO     | sum of deviations: -245065138873.00003
[2026-03-27 00:44:17] 2026-03-27 04:43:13,402 | INFO     | mean x: 1774566427.0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,402 | INFO     | mean y: 2359573.036979969
[2026-03-27 00:44:17] 2026-03-27 04:43:13,403 | INFO     | intersect: 5132890545.3946295
[2026-03-27 00:44:17] 2026-03-27 04:43:13,403 | INFO     | chi2: 0.7870538857842747
[2026-03-27 00:44:17] 2026-03-27 04:43:13,404 | INFO     | current memory leak: -2.89 B/s (using 649 data points, chi2=0.79)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,404 | INFO     | could have reported an average CPU frequency of 3107 MHz (26 samples)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,404 | INFO     | ..............................
[2026-03-27 00:44:17] 2026-03-27 04:43:13,404 | INFO     | . Timing measurements:
[2026-03-27 00:44:17] 2026-03-27 04:43:13,405 | INFO     | . get job = 0 s
[2026-03-27 00:44:17] 2026-03-27 04:43:13,405 | INFO     | . initial setup = 7 s
[2026-03-27 00:44:17] 2026-03-27 04:43:13,405 | INFO     | . payload setup = 9 s
[2026-03-27 00:44:17] 2026-03-27 04:43:13,405 | INFO     | . stage-in = 0 s
[2026-03-27 00:44:17] 2026-03-27 04:43:13,405 | INFO     | . payload execution = 41142 s
[2026-03-27 00:44:17] 2026-03-27 04:43:13,405 | INFO     | . stage-out = 2 s
[2026-03-27 00:44:17] 2026-03-27 04:43:13,405 | INFO     | . log creation = 0 s
[2026-03-27 00:44:17] 2026-03-27 04:43:13,405 | INFO     | ..............................
[2026-03-27 00:44:17] 2026-03-27 04:43:13,508 | INFO     | 
[2026-03-27 00:44:17] 2026-03-27 04:43:13,508 | INFO     | job summary report
[2026-03-27 00:44:17] 2026-03-27 04:43:13,508 | INFO     | --------------------------------------------------
[2026-03-27 00:44:17] 2026-03-27 04:43:13,508 | INFO     | PanDA job id: 7058496111
[2026-03-27 00:44:17] 2026-03-27 04:43:13,509 | INFO     | task id: 49176683
[2026-03-27 00:44:17] 2026-03-27 04:43:13,509 | INFO     | errors: (none)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,509 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-27 00:44:17] 2026-03-27 04:43:13,509 | INFO     | pilot state: finished 
[2026-03-27 00:44:17] 2026-03-27 04:43:13,509 | INFO     | transexitcode: 0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,509 | INFO     | exeerrorcode: 0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,509 | INFO     | exeerrordiag: 
[2026-03-27 00:44:17] 2026-03-27 04:43:13,509 | INFO     | exitcode: 0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,510 | INFO     | exitmsg: OK
[2026-03-27 00:44:17] 2026-03-27 04:43:13,510 | INFO     | cpuconsumptiontime: 162406 s
[2026-03-27 00:44:17] 2026-03-27 04:43:13,510 | INFO     | nevents: 400
[2026-03-27 00:44:17] 2026-03-27 04:43:13,510 | INFO     | neventsw: 0
[2026-03-27 00:44:17] 2026-03-27 04:43:13,510 | INFO     | pid: 199770
[2026-03-27 00:44:17] 2026-03-27 04:43:13,510 | INFO     | pgrp: 199770
[2026-03-27 00:44:17] 2026-03-27 04:43:13,510 | INFO     | corecount: 4
[2026-03-27 00:44:17] 2026-03-27 04:43:13,510 | INFO     | event service: False
[2026-03-27 00:44:17] 2026-03-27 04:43:13,510 | INFO     | sizes: {0: 2279835, 1: 2280239, 41155: 2323176, 41156: 2323175, 41159: 2332257, 41162: 2332313, 41163: 2332635}
[2026-03-27 00:44:17] 2026-03-27 04:43:13,511 | INFO     | --------------------------------------------------
[2026-03-27 00:44:17] 2026-03-27 04:43:13,511 | INFO     | 
[2026-03-27 00:44:17] 2026-03-27 04:43:13,511 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/7
[2026-03-27 00:44:17] 2026-03-27 04:43:13,527 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,527 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,527 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,527 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,528 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,528 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,528 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,528 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,528 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,529 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,529 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-27 00:44:17] 2026-03-27 04:43:13,529 | INFO     | job 7058496111 has completed (purged errors)
[2026-03-27 00:44:17] 2026-03-27 04:43:13,530 | INFO     | overall cleanup function is called
[2026-03-27 00:44:17] 2026-03-27 04:43:14,537 | INFO     | --- collectZombieJob: --- 10, [199770]
[2026-03-27 00:44:17] 2026-03-27 04:43:14,537 | INFO     | zombie collector waiting for pid 199770
[2026-03-27 00:44:17] 2026-03-27 04:43:14,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-27 00:44:17] 2026-03-27 04:43:14,538 | INFO     | collected zombie processes
[2026-03-27 00:44:17] 2026-03-27 04:43:14,538 | INFO     | will attempt to kill all subprocesses of pid=199770
[2026-03-27 00:44:17] 2026-03-27 04:43:14,803 | INFO     | process IDs to be killed: [199770] (in reverse order)
[2026-03-27 00:44:17] 2026-03-27 04:43:14,854 | WARNING  | found no corresponding commands to process id(s)
[2026-03-27 00:44:17] 2026-03-27 04:43:14,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-27 00:44:17] 2026-03-27 04:43:14,863 | INFO     | did not find any defunct processes belonging to 199770
[2026-03-27 00:44:17] 2026-03-27 04:43:14,870 | INFO     | did not find any defunct processes belonging to 199770
[2026-03-27 00:44:17] 2026-03-27 04:43:14,870 | INFO     | ready for new job
[2026-03-27 00:44:17] 2026-03-27 04:43:14,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-27 00:44:17] 2026-03-27 04:43:14,874 | INFO     | **************************************
[2026-03-27 00:44:17] 2026-03-27 04:43:14,874 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-27 00:44:17] 2026-03-27 04:43:14,875 | INFO     | **************************************
[2026-03-27 00:44:17] 2026-03-27 04:43:14,875 | INFO     | 
[2026-03-27 00:44:17] 2026-03-27 04:43:14,876 | INFO     | architecture information:
[2026-03-27 00:44:17] 2026-03-27 04:43:14,876 | INFO     | executing command: cat /etc/os-release
[2026-03-27 00:44:17] 2026-03-27 04:43:14,888 | INFO     | cat /etc/os-release:
[2026-03-27 00:44:17] NAME="CentOS Linux"
[2026-03-27 00:44:17] VERSION="7 (Core)"
[2026-03-27 00:44:17] ID="centos"
[2026-03-27 00:44:17] ID_LIKE="rhel fedora"
[2026-03-27 00:44:17] VERSION_ID="7"
[2026-03-27 00:44:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-27 00:44:17] ANSI_COLOR="0;31"
[2026-03-27 00:44:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-27 00:44:17] HOME_URL="https://www.centos.org/"
[2026-03-27 00:44:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-27 00:44:17] 
[2026-03-27 00:44:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-27 00:44:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-27 00:44:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-27 00:44:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-27 00:44:17] 
[2026-03-27 00:44:17] 2026-03-27 04:43:14,888 | INFO     | **************************************
[2026-03-27 00:44:17] 2026-03-27 04:43:15,391 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/7
[2026-03-27 00:44:17] 2026-03-27 04:43:15,403 | INFO     | sufficient remaining disk space (73011298304 B)
[2026-03-27 00:44:17] 2026-03-27 04:43:15,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-27 00:44:17] 2026-03-27 04:43:15,404 | INFO     | current server update state: UPDATING_FINAL
[2026-03-27 00:44:17] 2026-03-27 04:43:15,404 | INFO     | update_server=False
[2026-03-27 00:44:17] 2026-03-27 04:43:15,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-27 00:44:17] 2026-03-27 04:43:15,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-27 00:44:17] 2026-03-27 04:43:15,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-27 00:44:17] 2026-03-27 04:43:15,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-27 00:44:17] 2026-03-27 04:43:15,406 | INFO     | aborting loop
[2026-03-27 00:44:17] 2026-03-27 04:43:16,186 | INFO     | all data control threads have been joined
[2026-03-27 00:44:17] 2026-03-27 04:43:16,295 | INFO     | all payload control threads have been joined
[2026-03-27 00:44:17] 2026-03-27 04:43:16,307 | INFO     | all job control threads have been joined
[2026-03-27 00:44:17] 2026-03-27 04:43:16,409 | INFO     | [job] queue monitor thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:16,409 | INFO     | [job] retrieve thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:16,411 | INFO     | [job] job monitor thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:16,652 | INFO     | [job] validate thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,026 | INFO     | [job] create_data_payload thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,033 | INFO     | [payload] validate_pre thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,127 | INFO     | [payload] execute_payloads thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,191 | INFO     | [data] control thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,296 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,300 | INFO     | [payload] control thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,312 | INFO     | [job] control thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,409 | INFO     | [data] copytool_out thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,657 | INFO     | [data] copytool_in thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-27 00:44:17] 2026-03-27 04:43:17,899 | INFO     | [payload] failed_post thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:17,967 | INFO     | [payload] validate_post thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:21,888 | INFO     | [data] queue_monitor thread has finished
[2026-03-27 00:44:17] 2026-03-27 04:43:45,987 | INFO     | PID=195222 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-27 00:44:17] 2026-03-27 04:43:45,987 | INFO     | .. there are 4 such processes running
[2026-03-27 00:44:17] 2026-03-27 04:43:45,988 | INFO     | found 0 job(s) in 20 queues
[2026-03-27 00:44:17] 2026-03-27 04:43:45,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-27 00:44:17] 2026-03-27 04:43:45,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-27 00:44:17] 2026-03-27 04:44:12,300 | INFO     | [monitor] cgroup control has ended
[2026-03-27 00:44:17] 2026-03-27 04:44:12,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135704579249984)>', '<ExcThread(monitor, started 135704222873344)>']
[2026-03-27 00:44:17] 2026-03-27 04:44:13,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-27 00:44:17] 2026-03-27 04:44:13,112 | INFO     | [monitor] control thread has ended
[2026-03-27 00:44:17] 2026-03-27 04:44:17,550 | INFO     | all workflow threads have been joined
[2026-03-27 00:44:17] 2026-03-27 04:44:17,550 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-27 00:44:17] 2026-03-27 04:44:17,550 | INFO     | traces error code: 0
[2026-03-27 00:44:17] 2026-03-27 04:44:17,550 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-27 00:44:17] 2026-03-27 04:44:17,637 [wrapper] ==== pilot stdout END ====
[2026-03-27 00:44:17] 2026-03-27 04:44:17,639 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-27 00:44:17] 2026-03-27 04:44:17,641 [wrapper] pilotpid: 195222
[2026-03-27 00:44:17] 2026-03-27 04:44:17,644 [wrapper] Pilot exit status: 0
[2026-03-27 00:44:17] 2026-03-27 04:44:17,652 [wrapper] pandaids: 7058496111
[2026-03-27 00:44:17] 2026-03-27 04:44:17,695 [wrapper] cleanup supervisor_pilot  320653 195223
[2026-03-27 00:44:17] 2026-03-27 04:44:17,698 [wrapper] Test setup, not cleaning
[2026-03-27 00:44:17] 2026-03-27 04:44:17,700 [wrapper] apfmon messages muted
[2026-03-27 00:44:17] 2026-03-27 04:44:17,703 [wrapper] ==== wrapper stdout END ====
[2026-03-27 00:44:17] 2026-03-27 04:44:17,705 [wrapper] ==== wrapper stderr END ====
[2026-03-27 00:44:17]  *** Error codes and diagnostics ***
[2026-03-27 00:44:17]     "exeErrorCode": 0,
[2026-03-27 00:44:17]     "exeErrorDiag": "",
[2026-03-27 00:44:17]     "pilotErrorCode": 0,
[2026-03-27 00:44:17]     "pilotErrorDiag": "",
[2026-03-27 00:44:17]  *** Listing of results directory ***
[2026-03-27 00:44:17] total 494804
[2026-03-27 00:44:17] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 18 04:55 pilot3.tar.gz
[2026-03-27 00:44:17] -rwx------ 1 whitlerd whitlerd     36322 Mar 18 04:58 runpilot2-wrapper.sh
[2026-03-27 00:44:17] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 18 05:01 queuedata.json
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 26 13:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-27 00:44:17] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 26 13:16 run_atlas
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 26 13:16 job.xml
[2026-03-27 00:44:17] -rw-r--r-- 2 whitlerd whitlerd 248401050 Mar 26 13:16 EVNT.49134836._000009.pool.root.1
[2026-03-27 00:44:17] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 26 13:16 start_atlas.sh
[2026-03-27 00:44:17] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 26 13:16 shared
[2026-03-27 00:44:17] -rw-r--r-- 2 whitlerd whitlerd    597544 Mar 26 13:16 input.tar.gz
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd      8862 Mar 26 13:16 init_data.xml
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 26 13:16 boinc_setup_complete
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 26 13:16 boinc_lockfile
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd      2614 Mar 26 13:16 pandaJob.out
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd   1012352 Mar 26 13:17 agis_schedconf.cvmfs.json
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd       427 Mar 26 13:17 workernode_map.json
[2026-03-27 00:44:17] drwx------ 5 whitlerd whitlerd      4096 Mar 26 13:17 pilot3
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd 241196554 Mar 27 00:42 HITS.49176683._000208.pool.root.1
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar 27 00:42 boinc_task_state.xml
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd      1038 Mar 27 00:43 memory_monitor_summary.json
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd   1511579 Mar 27 00:43 agis_ddmendpoints.agis.ALL.json
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd    768112 Mar 27 00:43 log.49176683._000208.job.log.tgz.1
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd      6326 Mar 27 00:43 heartbeat.json
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd        95 Mar 27 00:43 pilot_heartbeat.json
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 27 00:43 boinc_mmap_file
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd        29 Mar 27 00:43 wrapper_checkpoint.txt
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd      4832 Mar 27 00:44 pilotlog.txt
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd   5797344 Mar 27 00:44 log.49176683._000208.job.log.1
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd       357 Mar 27 00:44 output.list
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 27 00:44 runtime_log
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd   6584320 Mar 27 00:44 result.tar.gz
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd      8985 Mar 27 00:44 runtime_log.err
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd       648 Mar 27 00:44 LtHLDmQu1M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmb2yLDmyLOwBo.diag
[2026-03-27 00:44:17] -rw-rw-r-- 1 whitlerd whitlerd     21399 Mar 27 00:44 stderr.txt
[2026-03-27 00:44:17] HITS file was successfully produced:
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd 241196554 Mar 27 00:42 shared/HITS.pool.root.1
[2026-03-27 00:44:17]  *** Contents of shared directory: ***
[2026-03-27 00:44:17] total 485164
[2026-03-27 00:44:17] -rw-r--r-- 2 whitlerd whitlerd 248401050 Mar 26 13:16 ATLAS.root_0
[2026-03-27 00:44:17] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 26 13:16 start_atlas.sh
[2026-03-27 00:44:17] -rw-r--r-- 2 whitlerd whitlerd    597544 Mar 26 13:16 input.tar.gz
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd 241196554 Mar 27 00:42 HITS.pool.root.1
[2026-03-27 00:44:17] -rw------- 1 whitlerd whitlerd   6584320 Mar 27 00:44 result.tar.gz
00:44:19 (191060): run_atlas exited; CPU time 163881.831938
00:44:19 (191060): called boinc_finish(0)

</stderr_txt>
]]>

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