Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:05:49 (590525): wrapper (7.7.26015): starting
07:05:49 (590525): wrapper: running run_atlas (--nthreads 10)
[2026-03-26 07:05:50] Arguments: --nthreads 10
[2026-03-26 07:05:50] Threads: 10
[2026-03-26 07:05:50] Checking for CVMFS
[2026-03-26 07:05:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 07:05:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 07:05:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 07:05:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 07:05:51] 2.13.3.0 12161 202767 391236 157716 0 666 22331895 40960000 15714 16776704 0 538672206 99.577 618251205 36998 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-26 07:05:51] CVMFS is ok
[2026-03-26 07:05:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 07:05:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 07:05:51] Further information can be found at the LHC@home message board.
[2026-03-26 07:05:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 07:05:51] Checking for apptainer binary...
[2026-03-26 07:05:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 07:05:51] Running /usr/bin/apptainer --version
[2026-03-26 07:05:51] apptainer version 1.4.5-2.el9
[2026-03-26 07:05:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 07:05:52] c6-5-7-1.aglt2.org
[2026-03-26 07:05:52] apptainer works
[2026-03-26 07:05:52] Set ATHENA_PROC_NUMBER=10
[2026-03-26 07:05:52] Set ATHENA_CORE_NUMBER=10
[2026-03-26 07:05:52] Starting ATLAS job with PandaID=7057778131
[2026-03-26 07:05:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:48:19 (701880): wrapper (7.7.26015): starting
07:48:19 (701880): wrapper: running run_atlas (--nthreads 9)
[2026-03-26 07:48:19] Arguments: --nthreads 9
[2026-03-26 07:48:19] Threads: 9
[2026-03-26 07:48:19] This job has been restarted, cleaning up previous attempt
[2026-03-26 07:48:19] Checking for CVMFS
[2026-03-26 07:48:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 07:48:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 07:48:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 07:48:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 07:48:21] 2.13.3.0 12161 202810 373832 157718 1 252 23306295 40960000 14476 16776704 0 538804629 99.577 618583251 36999 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-26 07:48:21] CVMFS is ok
[2026-03-26 07:48:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 07:48:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 07:48:22] Further information can be found at the LHC@home message board.
[2026-03-26 07:48:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 07:48:22] Checking for apptainer binary...
[2026-03-26 07:48:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 07:48:22] Running /usr/bin/apptainer --version
[2026-03-26 07:48:22] apptainer version 1.4.5-2.el9
[2026-03-26 07:48:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 07:48:22] c6-5-7-1.aglt2.org
[2026-03-26 07:48:22] apptainer works
[2026-03-26 07:48:22] Set ATHENA_PROC_NUMBER=9
[2026-03-26 07:48:22] Set ATHENA_CORE_NUMBER=9
[2026-03-26 07:48:22] Starting ATLAS job with PandaID=7057778131
[2026-03-26 07:48:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 14:47:40]  *** The last 200 lines of the pilot log: ***
[2026-03-26 14:47:40] 2026-03-26 18:46:39,236 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,236 | INFO     | log transfer has been attempted: DONE
[2026-03-26 14:47:40] 2026-03-26 18:46:39,236 | INFO     | job 7057778131 has finished - writing final server update
[2026-03-26 14:47:40] 2026-03-26 18:46:39,237 | INFO     | total number of processed events: 400 (read)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,252 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7057778131/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,253 | INFO     | extracted standard info from prmon json
[2026-03-26 14:47:40] 2026-03-26 18:46:39,253 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 14:47:40] 2026-03-26 18:46:39,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 14:47:40] 2026-03-26 18:46:39,253 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 14:47:40] 2026-03-26 18:46:39,253 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 14:47:40] 2026-03-26 18:46:39,269 | INFO     | fitting pss+swap vs Time
[2026-03-26 14:47:40] 2026-03-26 18:46:39,270 | INFO     | sum of square deviations: 21526015350.705536
[2026-03-26 14:47:40] 2026-03-26 18:46:39,273 | INFO     | sum of deviations: 11564708590.14597
[2026-03-26 14:47:40] 2026-03-26 18:46:39,273 | INFO     | mean x: 1774538273.3600974
[2026-03-26 14:47:40] 2026-03-26 18:46:39,273 | INFO     | mean y: 2606005.3503649635
[2026-03-26 14:47:40] 2026-03-26 18:46:39,273 | INFO     | intersect: -950752880.5893724
[2026-03-26 14:47:40] 2026-03-26 18:46:39,274 | INFO     | chi2: 2.5290141751954893
[2026-03-26 14:47:40] 2026-03-26 18:46:39,274 | INFO     | sum of square deviations: 20749887797.549404
[2026-03-26 14:47:40] 2026-03-26 18:46:39,277 | INFO     | sum of deviations: 40532353365.38426
[2026-03-26 14:47:40] 2026-03-26 18:46:39,277 | INFO     | mean x: 1774538120.864532
[2026-03-26 14:47:40] 2026-03-26 18:46:39,278 | INFO     | mean y: 2611641.4433497535
[2026-03-26 14:47:40] 2026-03-26 18:46:39,278 | INFO     | intersect: -3463730291.437886
[2026-03-26 14:47:40] 2026-03-26 18:46:39,278 | INFO     | chi2: 1.7429169775614393
[2026-03-26 14:47:40] 2026-03-26 18:46:39,278 | INFO     | current chi2=1.7429169775614393 (change=31.083147154494927 %)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,279 | INFO     | sum of square deviations: 19992644319.37645
[2026-03-26 14:47:40] 2026-03-26 18:46:39,282 | INFO     | sum of deviations: 40375911085.70321
[2026-03-26 14:47:40] 2026-03-26 18:46:39,282 | INFO     | mean x: 1774537968.3690772
[2026-03-26 14:47:40] 2026-03-26 18:46:39,282 | INFO     | mean y: 2611609.927680798
[2026-03-26 14:47:40] 2026-03-26 18:46:39,282 | INFO     | intersect: -3581135796.5939255
[2026-03-26 14:47:40] 2026-03-26 18:46:39,283 | INFO     | chi2: 1.7432683283731172
[2026-03-26 14:47:40] 2026-03-26 18:46:39,283 | INFO     | current chi2=1.7432683283731172 (change=-0.02015878072227535 %)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,283 | INFO     | right removable region: 400
[2026-03-26 14:47:40] 2026-03-26 18:46:39,283 | INFO     | sum of square deviations: 20749797517.5494
[2026-03-26 14:47:40] 2026-03-26 18:46:39,286 | INFO     | sum of deviations: -62669961502.1281
[2026-03-26 14:47:40] 2026-03-26 18:46:39,287 | INFO     | mean x: 1774538425.864532
[2026-03-26 14:47:40] 2026-03-26 18:46:39,287 | INFO     | mean y: 2620522.852216749
[2026-03-26 14:47:40] 2026-03-26 18:46:39,287 | INFO     | intersect: 5362203176.076653
[2026-03-26 14:47:40] 2026-03-26 18:46:39,287 | INFO     | chi2: 0.9296408007785801
[2026-03-26 14:47:40] 2026-03-26 18:46:39,287 | INFO     | current chi2=0.9296408007785801 (change=63.24098101558802 %)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,288 | INFO     | sum of square deviations: 19992488525.112198
[2026-03-26 14:47:40] 2026-03-26 18:46:39,291 | INFO     | sum of deviations: -67475385318.16715
[2026-03-26 14:47:40] 2026-03-26 18:46:39,291 | INFO     | mean x: 1774538578.3665836
[2026-03-26 14:47:40] 2026-03-26 18:46:39,291 | INFO     | mean y: 2621478.987531172
[2026-03-26 14:47:40] 2026-03-26 18:46:39,291 | INFO     | intersect: 5991754556.985174
[2026-03-26 14:47:40] 2026-03-26 18:46:39,292 | INFO     | chi2: 0.90708669020617
[2026-03-26 14:47:40] 2026-03-26 18:46:39,292 | INFO     | current chi2=0.90708669020617 (change=2.4261102302653743 %)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,292 | INFO     | left removable region: 20
[2026-03-26 14:47:40] 2026-03-26 18:46:39,293 | INFO     | sum of square deviations: 17013088821.607859
[2026-03-26 14:47:40] 2026-03-26 18:46:39,295 | INFO     | sum of deviations: -27900239204.41834
[2026-03-26 14:47:40] 2026-03-26 18:46:39,296 | INFO     | mean x: 1774538547.8605263
[2026-03-26 14:47:40] 2026-03-26 18:46:39,296 | INFO     | mean y: 2625574.9921052633
[2026-03-26 14:47:40] 2026-03-26 18:46:39,296 | INFO     | intersect: 2912740868.1003437
[2026-03-26 14:47:40] 2026-03-26 18:46:39,296 | INFO     | chi2: 0.10386018187994926
[2026-03-26 14:47:40] 2026-03-26 18:46:39,296 | INFO     | current memory leak: -1.64 B/s (using 380 data points, chi2=0.10)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,297 | INFO     | could have reported an average CPU frequency of 3006 MHz (17 samples)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,297 | INFO     | ..............................
[2026-03-26 14:47:40] 2026-03-26 18:46:39,297 | INFO     | . Timing measurements:
[2026-03-26 14:47:40] 2026-03-26 18:46:39,297 | INFO     | . get job = 0 s
[2026-03-26 14:47:40] 2026-03-26 18:46:39,297 | INFO     | . initial setup = 1 s
[2026-03-26 14:47:40] 2026-03-26 18:46:39,297 | INFO     | . payload setup = 27 s
[2026-03-26 14:47:40] 2026-03-26 18:46:39,298 | INFO     | . stage-in = 0 s
[2026-03-26 14:47:40] 2026-03-26 18:46:39,298 | INFO     | . payload execution = 25032 s
[2026-03-26 14:47:40] 2026-03-26 18:46:39,298 | INFO     | . stage-out = 3 s
[2026-03-26 14:47:40] 2026-03-26 18:46:39,298 | INFO     | . log creation = 0 s
[2026-03-26 14:47:40] 2026-03-26 18:46:39,298 | INFO     | ..............................
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | 
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | job summary report
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | --------------------------------------------------
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | PanDA job id: 7057778131
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | task id: 49192270
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | errors: (none)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | pilot state: finished 
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | transexitcode: 0
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | exeerrorcode: 0
[2026-03-26 14:47:40] 2026-03-26 18:46:39,385 | INFO     | exeerrordiag: 
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | exitcode: 0
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | exitmsg: OK
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | cpuconsumptiontime: 65549 s
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | nevents: 400
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | neventsw: 0
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | pid: 714479
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | pgrp: 714479
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | corecount: 9
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | event service: False
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | sizes: {0: 2279879, 1: 2280340, 25063: 2315724, 25068: 2324722, 25070: 2324778, 25071: 2325036}
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | --------------------------------------------------
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | 
[2026-03-26 14:47:40] 2026-03-26 18:46:39,386 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-26 14:47:40] 2026-03-26 18:46:39,502 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,504 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,504 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 14:47:40] 2026-03-26 18:46:39,504 | INFO     | job 7057778131 has completed (purged errors)
[2026-03-26 14:47:40] 2026-03-26 18:46:39,504 | INFO     | overall cleanup function is called
[2026-03-26 14:47:40] 2026-03-26 18:46:40,516 | INFO     | --- collectZombieJob: --- 10, [714479]
[2026-03-26 14:47:40] 2026-03-26 18:46:40,516 | INFO     | zombie collector waiting for pid 714479
[2026-03-26 14:47:40] 2026-03-26 18:46:40,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 14:47:40] 2026-03-26 18:46:40,516 | INFO     | collected zombie processes
[2026-03-26 14:47:40] 2026-03-26 18:46:40,516 | INFO     | will attempt to kill all subprocesses of pid=714479
[2026-03-26 14:47:40] 2026-03-26 18:46:41,179 | INFO     | process IDs to be killed: [714479] (in reverse order)
[2026-03-26 14:47:40] 2026-03-26 18:46:41,322 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 14:47:40] 2026-03-26 18:46:41,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 14:47:40] 2026-03-26 18:46:41,348 | INFO     | did not find any defunct processes belonging to 714479
[2026-03-26 14:47:40] 2026-03-26 18:46:41,374 | INFO     | did not find any defunct processes belonging to 714479
[2026-03-26 14:47:40] 2026-03-26 18:46:41,375 | INFO     | ready for new job
[2026-03-26 14:47:40] 2026-03-26 18:46:41,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 14:47:40] 2026-03-26 18:46:41,380 | INFO     | **************************************
[2026-03-26 14:47:40] 2026-03-26 18:46:41,381 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 14:47:40] 2026-03-26 18:46:41,381 | INFO     | **************************************
[2026-03-26 14:47:40] 2026-03-26 18:46:41,381 | INFO     | 
[2026-03-26 14:47:40] 2026-03-26 18:46:41,385 | INFO     | architecture information:
[2026-03-26 14:47:40] 2026-03-26 18:46:41,389 | INFO     | executing command: cat /etc/os-release
[2026-03-26 14:47:40] 2026-03-26 18:46:41,433 | INFO     | cat /etc/os-release:
[2026-03-26 14:47:40] NAME="CentOS Linux"
[2026-03-26 14:47:40] VERSION="7 (Core)"
[2026-03-26 14:47:40] ID="centos"
[2026-03-26 14:47:40] ID_LIKE="rhel fedora"
[2026-03-26 14:47:40] VERSION_ID="7"
[2026-03-26 14:47:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 14:47:40] ANSI_COLOR="0;31"
[2026-03-26 14:47:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 14:47:40] HOME_URL="https://www.centos.org/"
[2026-03-26 14:47:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 14:47:40] 
[2026-03-26 14:47:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 14:47:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 14:47:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 14:47:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 14:47:40] 
[2026-03-26 14:47:40] 2026-03-26 18:46:41,434 | INFO     | **************************************
[2026-03-26 14:47:40] 2026-03-26 18:46:41,937 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-26 14:47:40] 2026-03-26 18:46:42,123 | INFO     | sufficient remaining disk space (74199334912 B)
[2026-03-26 14:47:40] 2026-03-26 18:46:42,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 14:47:40] 2026-03-26 18:46:42,124 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 14:47:40] 2026-03-26 18:46:42,124 | INFO     | update_server=False
[2026-03-26 14:47:40] 2026-03-26 18:46:42,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 14:47:40] 2026-03-26 18:46:42,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 14:47:40] 2026-03-26 18:46:42,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 14:47:40] 2026-03-26 18:46:42,127 | INFO     | aborting loop
[2026-03-26 14:47:40] 2026-03-26 18:46:42,659 | INFO     | all payload control threads have been joined
[2026-03-26 14:47:40] 2026-03-26 18:46:43,105 | INFO     | all data control threads have been joined
[2026-03-26 14:47:40] 2026-03-26 18:46:43,132 | INFO     | [job] retrieve thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:43,136 | INFO     | [job] job monitor thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:43,405 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:43,479 | INFO     | [payload] validate_post thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:43,501 | INFO     | all job control threads have been joined
[2026-03-26 14:47:40] 2026-03-26 18:46:43,645 | INFO     | [job] validate thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:43,666 | INFO     | [payload] control thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:43,725 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:43,962 | INFO     | [payload] failed_post thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:44,102 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:44,118 | INFO     | [data] control thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:44,133 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:44,137 | INFO     | [data] copytool_out thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:44,149 | INFO     | [data] copytool_in thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:44,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 14:47:40] 2026-03-26 18:46:44,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 14:47:40] 2026-03-26 18:46:44,507 | INFO     | [job] control thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:45,408 | INFO     | [job] queue monitor thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:46:48,178 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 14:47:40] 2026-03-26 18:47:12,415 | INFO     | PID=709309 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-26 14:47:40] 2026-03-26 18:47:12,415 | INFO     | .. there are 24 such processes running
[2026-03-26 14:47:40] 2026-03-26 18:47:12,420 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 14:47:40] 2026-03-26 18:47:12,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 14:47:40] 2026-03-26 18:47:12,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 14:47:40] 2026-03-26 18:47:31,632 | INFO     | [monitor] cgroup control has ended
[2026-03-26 14:47:40] 2026-03-26 18:47:32,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616178743104)>', '<ExcThread(monitor, started 140615551547136)>']
[2026-03-26 14:47:40] 2026-03-26 18:47:33,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 14:47:40] 2026-03-26 18:47:33,553 | INFO     | [monitor] control thread has ended
[2026-03-26 14:47:40] 2026-03-26 18:47:37,914 | INFO     | all workflow threads have been joined
[2026-03-26 14:47:40] 2026-03-26 18:47:37,914 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 14:47:40] 2026-03-26 18:47:37,914 | INFO     | traces error code: 0
[2026-03-26 14:47:40] 2026-03-26 18:47:37,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 14:47:40] 2026-03-26 18:47:38,366 [wrapper] ==== pilot stdout END ====
[2026-03-26 14:47:40] 2026-03-26 18:47:38,403 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 14:47:40] 2026-03-26 18:47:38,447 [wrapper] pilotpid: 709309
[2026-03-26 14:47:40] 2026-03-26 18:47:38,485 [wrapper] Pilot exit status: 0
[2026-03-26 14:47:40] 2026-03-26 18:47:38,671 [wrapper] pandaids: 7057778131 7057778131
[2026-03-26 14:47:40] 2026-03-26 18:47:39,462 [wrapper] cleanup supervisor_pilot 1837576 709310
[2026-03-26 14:47:40] 2026-03-26 18:47:39,507 [wrapper] Test setup, not cleaning
[2026-03-26 14:47:40] 2026-03-26 18:47:39,541 [wrapper] apfmon messages muted
[2026-03-26 14:47:40] 2026-03-26 18:47:39,591 [wrapper] ==== wrapper stdout END ====
[2026-03-26 14:47:40] 2026-03-26 18:47:39,652 [wrapper] ==== wrapper stderr END ====
[2026-03-26 14:47:40]  *** Error codes and diagnostics ***
[2026-03-26 14:47:40]     "exeErrorCode": 0,
[2026-03-26 14:47:40]     "exeErrorDiag": "",
[2026-03-26 14:47:40]     "pilotErrorCode": 0,
[2026-03-26 14:47:40]     "pilotErrorDiag": "",
[2026-03-26 14:47:40]  *** Listing of results directory ***
[2026-03-26 14:47:40] total 726248
[2026-03-26 14:47:40] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas    585013 Mar 17 21:12 pilot3.tar.gz
[2026-03-26 14:47:40] -rwx------. 1 boincer umatlas     36322 Mar 17 21:13 runpilot2-wrapper.sh
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas      5111 Mar 17 21:14 queuedata.json
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas       100 Mar 26 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 14:47:40] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 26 07:05 run_atlas
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas       105 Mar 26 07:05 job.xml
[2026-03-26 14:47:40] -rw-r--r--. 3 boincer umatlas 253904981 Mar 26 07:05 EVNT.49130996._000001.pool.root.1
[2026-03-26 14:47:40] -rw-r--r--. 3 boincer umatlas 253904981 Mar 26 07:05 ATLAS.root_0
[2026-03-26 14:47:40] -rw-r--r--. 2 boincer umatlas     15845 Mar 26 07:05 start_atlas.sh
[2026-03-26 14:47:40] drwxrwx--x. 2 boincer umatlas      4096 Mar 26 07:05 shared
[2026-03-26 14:47:40] -rw-r--r--. 2 boincer umatlas    597536 Mar 26 07:05 input.tar.gz
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas         0 Mar 26 07:05 boinc_lockfile
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas      2628 Mar 26 07:48 pandaJob.out
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas        57 Mar 26 07:48 setup.sh.local
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas   1012192 Mar 26 07:48 agis_schedconf.cvmfs.json
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas       440 Mar 26 07:48 workernode_map.json
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas      6841 Mar 26 14:45 init_data.xml
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas 224467334 Mar 26 14:45 HITS.49192270._000012.pool.root.1
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas       530 Mar 26 14:45 boinc_task_state.xml
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas      1046 Mar 26 14:46 memory_monitor_summary.json
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas   1511579 Mar 26 14:46 agis_ddmendpoints.agis.ALL.json
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas    603150 Mar 26 14:46 log.49192270._000012.job.log.tgz.1
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas      6381 Mar 26 14:46 heartbeat.json
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas        96 Mar 26 14:47 pilot_heartbeat.json
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas      8192 Mar 26 14:47 boinc_mmap_file
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas        28 Mar 26 14:47 wrapper_checkpoint.txt
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas      4819 Mar 26 14:47 pilotlog.txt
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas   3131363 Mar 26 14:47 log.49192270._000012.job.log.1
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas       357 Mar 26 14:47 output.list
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas       620 Mar 26 14:47 runtime_log
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas   3747840 Mar 26 14:47 result.tar.gz
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas       784 Mar 26 14:47 o5iKDmZeuM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqLyLDmb67ghm.diag
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas      9427 Mar 26 14:47 runtime_log.err
[2026-03-26 14:47:40] -rw-r--r--. 1 boincer umatlas      9553 Mar 26 14:47 stderr.txt
[2026-03-26 14:47:40] HITS file was successfully produced:
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas 224467334 Mar 26 14:45 shared/HITS.pool.root.1
[2026-03-26 14:47:40]  *** Contents of shared directory: ***
[2026-03-26 14:47:40] total 471428
[2026-03-26 14:47:40] -rw-r--r--. 3 boincer umatlas 253904981 Mar 26 07:05 ATLAS.root_0
[2026-03-26 14:47:40] -rw-r--r--. 2 boincer umatlas     15845 Mar 26 07:05 start_atlas.sh
[2026-03-26 14:47:40] -rw-r--r--. 2 boincer umatlas    597536 Mar 26 07:05 input.tar.gz
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas 224467334 Mar 26 14:45 HITS.pool.root.1
[2026-03-26 14:47:40] -rw-------. 1 boincer umatlas   3747840 Mar 26 14:47 result.tar.gz
14:47:42 (701880): run_atlas exited; CPU time 66396.409579
14:47:42 (701880): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN