Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
06:53:43 (86212): wrapper (7.7.26015): starting
06:53:43 (86212): wrapper: running run_atlas (--nthreads 4)
[2026-03-26 06:53:43] Arguments: --nthreads 4
[2026-03-26 06:53:43] Threads: 4
[2026-03-26 06:53:43] Checking for CVMFS
[2026-03-26 06:53:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 06:53:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 06:53:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 06:53:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 06:53:43] 2.13.3.0 77672 5 32244 157716 2 17 3597637 4096000 0 130560 0 30320 99.957 2873 1366 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-26 06:53:43] CVMFS is ok
[2026-03-26 06:53:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 06:53:43] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-26 06:53:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-26 06:53:43] Further information can be found at the LHC@home message board.
[2026-03-26 06:53:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 06:53:43] Checking for apptainer binary...
[2026-03-26 06:53:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 06:53:43] Running /usr/bin/apptainer --version
[2026-03-26 06:53:43] apptainer version 1.4.5
[2026-03-26 06:53:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 06:53:43] P9X79
[2026-03-26 06:53:43] apptainer works
[2026-03-26 06:53:43] Set ATHENA_PROC_NUMBER=4
[2026-03-26 06:53:43] Set ATHENA_CORE_NUMBER=4
[2026-03-26 06:53:43] Starting ATLAS job with PandaID=7057888246
[2026-03-26 06:53:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 16:45:57]  *** The last 200 lines of the pilot log: ***
[2026-03-26 16:45:57] 2026-03-26 20:45:12,662 | INFO     | log transfer has been attempted: DONE
[2026-03-26 16:45:57] 2026-03-26 20:45:12,662 | INFO     | job 7057888246 has finished - writing final server update
[2026-03-26 16:45:57] 2026-03-26 20:45:12,663 | INFO     | total number of processed events: 400 (read)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,668 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/6/PanDA_Pilot-7057888246/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,668 | INFO     | extracted standard info from prmon json
[2026-03-26 16:45:57] 2026-03-26 20:45:12,669 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 16:45:57] 2026-03-26 20:45:12,669 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 16:45:57] 2026-03-26 20:45:12,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 16:45:57] 2026-03-26 20:45:12,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 16:45:57] 2026-03-26 20:45:12,684 | INFO     | fitting pss+swap vs Time
[2026-03-26 16:45:57] 2026-03-26 20:45:12,685 | INFO     | sum of square deviations: 61128831725.5
[2026-03-26 16:45:57] 2026-03-26 20:45:12,696 | INFO     | sum of deviations: 6370710710.499996
[2026-03-26 16:45:57] 2026-03-26 20:45:12,696 | INFO     | mean x: 1774540176.5
[2026-03-26 16:45:57] 2026-03-26 20:45:12,696 | INFO     | mean y: 2324362.97766323
[2026-03-26 16:45:57] 2026-03-26 20:45:12,696 | INFO     | intersect: -182614262.37357458
[2026-03-26 16:45:57] 2026-03-26 20:45:12,697 | INFO     | chi2: 2.033305813904726
[2026-03-26 16:45:57] 2026-03-26 20:45:12,698 | INFO     | sum of square deviations: 59566839648.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,709 | INFO     | sum of deviations: 39244645423.00001
[2026-03-26 16:45:57] 2026-03-26 20:45:12,709 | INFO     | mean x: 1774540024.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,709 | INFO     | mean y: 2327549.68457539
[2026-03-26 16:45:57] 2026-03-26 20:45:12,710 | INFO     | intersect: -1166799341.0877838
[2026-03-26 16:45:57] 2026-03-26 20:45:12,710 | INFO     | chi2: 1.3633472086522136
[2026-03-26 16:45:57] 2026-03-26 20:45:12,711 | INFO     | current chi2=1.3633472086522136 (change=32.94922980453862 %)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,712 | INFO     | sum of square deviations: 58031685283.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,722 | INFO     | sum of deviations: 38037712172.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,722 | INFO     | mean x: 1774539871.5
[2026-03-26 16:45:57] 2026-03-26 20:45:12,722 | INFO     | mean y: 2327429.786713287
[2026-03-26 16:45:57] 2026-03-26 20:45:12,722 | INFO     | intersect: -1160820539.132059
[2026-03-26 16:45:57] 2026-03-26 20:45:12,723 | INFO     | chi2: 1.3632967814751755
[2026-03-26 16:45:57] 2026-03-26 20:45:12,723 | INFO     | current chi2=1.3632967814751755 (change=0.0036987772973784165 %)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,724 | INFO     | right removable region: 571
[2026-03-26 16:45:57] 2026-03-26 20:45:12,724 | INFO     | sum of square deviations: 59566839648.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,735 | INFO     | sum of deviations: -47070816408.00001
[2026-03-26 16:45:57] 2026-03-26 20:45:12,735 | INFO     | mean x: 1774540329.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,735 | INFO     | mean y: 2329542.590987868
[2026-03-26 16:45:57] 2026-03-26 20:45:12,736 | INFO     | intersect: 1404604071.9860601
[2026-03-26 16:45:57] 2026-03-26 20:45:12,737 | INFO     | chi2: 0.8121033055484486
[2026-03-26 16:45:57] 2026-03-26 20:45:12,737 | INFO     | current chi2=0.8121033055484486 (change=60.059952615347164 %)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,738 | INFO     | sum of square deviations: 58031685283.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,748 | INFO     | sum of deviations: -20317547946.500008
[2026-03-26 16:45:57] 2026-03-26 20:45:12,748 | INFO     | mean x: 1774540481.5
[2026-03-26 16:45:57] 2026-03-26 20:45:12,748 | INFO     | mean y: 2326884.522727273
[2026-03-26 16:45:57] 2026-03-26 20:45:12,748 | INFO     | intersect: 623613534.0497458
[2026-03-26 16:45:57] 2026-03-26 20:45:12,749 | INFO     | chi2: 0.7257141131993783
[2026-03-26 16:45:57] 2026-03-26 20:45:12,749 | INFO     | current chi2=0.7257141131993783 (change=10.637709729641836 %)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,750 | INFO     | left removable region: 20
[2026-03-26 16:45:57] 2026-03-26 20:45:12,750 | INFO     | sum of square deviations: 51871856300.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,760 | INFO     | sum of deviations: 34665330222.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,760 | INFO     | mean x: 1774540451.0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,760 | INFO     | mean y: 2327534.849364791
[2026-03-26 16:45:57] 2026-03-26 20:45:12,760 | INFO     | intersect: -1183576250.2482934
[2026-03-26 16:45:57] 2026-03-26 20:45:12,761 | INFO     | chi2: 0.005312835482195026
[2026-03-26 16:45:57] 2026-03-26 20:45:12,761 | INFO     | current memory leak: 0.67 B/s (using 551 data points, chi2=0.01)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,762 | INFO     | could have reported an average CPU frequency of 3274 MHz (23 samples)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,762 | INFO     | ..............................
[2026-03-26 16:45:57] 2026-03-26 20:45:12,763 | INFO     | . Timing measurements:
[2026-03-26 16:45:57] 2026-03-26 20:45:12,763 | INFO     | . get job = 0 s
[2026-03-26 16:45:57] 2026-03-26 20:45:12,763 | INFO     | . initial setup = 5 s
[2026-03-26 16:45:57] 2026-03-26 20:45:12,763 | INFO     | . payload setup = 6 s
[2026-03-26 16:45:57] 2026-03-26 20:45:12,763 | INFO     | . stage-in = 0 s
[2026-03-26 16:45:57] 2026-03-26 20:45:12,763 | INFO     | . payload execution = 35451 s
[2026-03-26 16:45:57] 2026-03-26 20:45:12,764 | INFO     | . stage-out = 2 s
[2026-03-26 16:45:57] 2026-03-26 20:45:12,764 | INFO     | . log creation = 0 s
[2026-03-26 16:45:57] 2026-03-26 20:45:12,764 | INFO     | ..............................
[2026-03-26 16:45:57] 2026-03-26 20:45:12,884 | INFO     | 
[2026-03-26 16:45:57] 2026-03-26 20:45:12,884 | INFO     | job summary report
[2026-03-26 16:45:57] 2026-03-26 20:45:12,884 | INFO     | --------------------------------------------------
[2026-03-26 16:45:57] 2026-03-26 20:45:12,885 | INFO     | PanDA job id: 7057888246
[2026-03-26 16:45:57] 2026-03-26 20:45:12,885 | INFO     | task id: 49178662
[2026-03-26 16:45:57] 2026-03-26 20:45:12,885 | INFO     | errors: (none)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,885 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 16:45:57] 2026-03-26 20:45:12,885 | INFO     | pilot state: finished 
[2026-03-26 16:45:57] 2026-03-26 20:45:12,885 | INFO     | transexitcode: 0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,886 | INFO     | exeerrorcode: 0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,886 | INFO     | exeerrordiag: 
[2026-03-26 16:45:57] 2026-03-26 20:45:12,886 | INFO     | exitcode: 0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,886 | INFO     | exitmsg: OK
[2026-03-26 16:45:57] 2026-03-26 20:45:12,886 | INFO     | cpuconsumptiontime: 140348 s
[2026-03-26 16:45:57] 2026-03-26 20:45:12,886 | INFO     | nevents: 400
[2026-03-26 16:45:57] 2026-03-26 20:45:12,886 | INFO     | neventsw: 0
[2026-03-26 16:45:57] 2026-03-26 20:45:12,887 | INFO     | pid: 94592
[2026-03-26 16:45:57] 2026-03-26 20:45:12,887 | INFO     | pgrp: 94592
[2026-03-26 16:45:57] 2026-03-26 20:45:12,887 | INFO     | corecount: 4
[2026-03-26 16:45:57] 2026-03-26 20:45:12,887 | INFO     | event service: False
[2026-03-26 16:45:57] 2026-03-26 20:45:12,887 | INFO     | sizes: {0: 2280091, 1: 2280381, 11: 2280381, 35462: 2320727, 35466: 2329809, 35467: 2329947}
[2026-03-26 16:45:57] 2026-03-26 20:45:12,887 | INFO     | --------------------------------------------------
[2026-03-26 16:45:57] 2026-03-26 20:45:12,888 | INFO     | 
[2026-03-26 16:45:57] 2026-03-26 20:45:12,888 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/6
[2026-03-26 16:45:57] 2026-03-26 20:45:12,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,902 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,902 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,902 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,904 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,905 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 16:45:57] 2026-03-26 20:45:12,905 | INFO     | job 7057888246 has completed (purged errors)
[2026-03-26 16:45:57] 2026-03-26 20:45:12,905 | INFO     | overall cleanup function is called
[2026-03-26 16:45:57] 2026-03-26 20:45:13,913 | INFO     | --- collectZombieJob: --- 10, [94592]
[2026-03-26 16:45:57] 2026-03-26 20:45:13,913 | INFO     | zombie collector waiting for pid 94592
[2026-03-26 16:45:57] 2026-03-26 20:45:13,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 16:45:57] 2026-03-26 20:45:13,913 | INFO     | collected zombie processes
[2026-03-26 16:45:57] 2026-03-26 20:45:13,913 | INFO     | will attempt to kill all subprocesses of pid=94592
[2026-03-26 16:45:57] 2026-03-26 20:45:14,071 | INFO     | process IDs to be killed: [94592] (in reverse order)
[2026-03-26 16:45:57] 2026-03-26 20:45:14,109 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 16:45:57] 2026-03-26 20:45:14,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 16:45:57] 2026-03-26 20:45:14,113 | INFO     | did not find any defunct processes belonging to 94592
[2026-03-26 16:45:57] 2026-03-26 20:45:14,116 | INFO     | did not find any defunct processes belonging to 94592
[2026-03-26 16:45:57] 2026-03-26 20:45:14,117 | INFO     | ready for new job
[2026-03-26 16:45:57] 2026-03-26 20:45:14,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 16:45:57] 2026-03-26 20:45:14,119 | INFO     | **************************************
[2026-03-26 16:45:57] 2026-03-26 20:45:14,119 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 16:45:57] 2026-03-26 20:45:14,119 | INFO     | **************************************
[2026-03-26 16:45:57] 2026-03-26 20:45:14,119 | INFO     | 
[2026-03-26 16:45:57] 2026-03-26 20:45:14,120 | INFO     | architecture information:
[2026-03-26 16:45:57] 2026-03-26 20:45:14,120 | INFO     | executing command: cat /etc/os-release
[2026-03-26 16:45:57] 2026-03-26 20:45:14,129 | INFO     | cat /etc/os-release:
[2026-03-26 16:45:57] NAME="CentOS Linux"
[2026-03-26 16:45:57] VERSION="7 (Core)"
[2026-03-26 16:45:57] ID="centos"
[2026-03-26 16:45:57] ID_LIKE="rhel fedora"
[2026-03-26 16:45:57] VERSION_ID="7"
[2026-03-26 16:45:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 16:45:57] ANSI_COLOR="0;31"
[2026-03-26 16:45:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 16:45:57] HOME_URL="https://www.centos.org/"
[2026-03-26 16:45:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 16:45:57] 
[2026-03-26 16:45:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 16:45:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 16:45:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 16:45:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 16:45:57] 
[2026-03-26 16:45:57] 2026-03-26 20:45:14,130 | INFO     | **************************************
[2026-03-26 16:45:57] 2026-03-26 20:45:14,633 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/6
[2026-03-26 16:45:57] 2026-03-26 20:45:14,643 | INFO     | sufficient remaining disk space (73417097216 B)
[2026-03-26 16:45:57] 2026-03-26 20:45:14,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 16:45:57] 2026-03-26 20:45:14,643 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 16:45:57] 2026-03-26 20:45:14,644 | INFO     | update_server=False
[2026-03-26 16:45:57] 2026-03-26 20:45:14,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 16:45:57] 2026-03-26 20:45:14,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 16:45:57] 2026-03-26 20:45:14,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 16:45:57] 2026-03-26 20:45:14,798 | INFO     | all payload control threads have been joined
[2026-03-26 16:45:57] 2026-03-26 20:45:15,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 16:45:57] 2026-03-26 20:45:15,473 | INFO     | all data control threads have been joined
[2026-03-26 16:45:57] 2026-03-26 20:45:15,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 16:45:57] 2026-03-26 20:45:15,610 | INFO     | aborting loop
[2026-03-26 16:45:57] 2026-03-26 20:45:15,649 | INFO     | [job] retrieve thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:15,650 | INFO     | [job] queue monitor thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:15,804 | INFO     | [payload] control thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:15,919 | INFO     | [payload] validate_post thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:16,281 | INFO     | all job control threads have been joined
[2026-03-26 16:45:57] 2026-03-26 20:45:16,479 | INFO     | [data] control thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:16,538 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:16,580 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:16,615 | INFO     | [job] job monitor thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:16,671 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:16,675 | INFO     | [job] validate thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:17,023 | INFO     | [payload] failed_post thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:17,043 | INFO     | [data] copytool_in thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:17,169 | INFO     | [data] copytool_out thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:17,285 | INFO     | [job] control thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:18,650 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:25,349 | INFO     | job.realtimelogging is not enabled
[2026-03-26 16:45:57] 2026-03-26 20:45:26,355 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 16:45:57] 2026-03-26 20:45:45,850 | INFO     | PID=90032 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-26 16:45:57] 2026-03-26 20:45:45,851 | INFO     | .. there are 3 such processes running
[2026-03-26 16:45:57] 2026-03-26 20:45:45,851 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 16:45:57] 2026-03-26 20:45:45,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 16:45:57] 2026-03-26 20:45:45,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 16:45:57] 2026-03-26 20:45:50,884 | INFO     | [monitor] cgroup control has ended
[2026-03-26 16:45:57] 2026-03-26 20:45:52,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133355990640448)>', '<ExcThread(monitor, started 133355370702592)>']
[2026-03-26 16:45:57] 2026-03-26 20:45:52,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 16:45:57] 2026-03-26 20:45:52,879 | INFO     | [monitor] control thread has ended
[2026-03-26 16:45:57] 2026-03-26 20:45:57,209 | INFO     | all workflow threads have been joined
[2026-03-26 16:45:57] 2026-03-26 20:45:57,209 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 16:45:57] 2026-03-26 20:45:57,209 | INFO     | traces error code: 0
[2026-03-26 16:45:57] 2026-03-26 20:45:57,210 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 16:45:57] 2026-03-26 20:45:57,274 [wrapper] ==== pilot stdout END ====
[2026-03-26 16:45:57] 2026-03-26 20:45:57,276 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 16:45:57] 2026-03-26 20:45:57,278 [wrapper] pilotpid: 90032
[2026-03-26 16:45:57] 2026-03-26 20:45:57,280 [wrapper] Pilot exit status: 0
[2026-03-26 16:45:57] 2026-03-26 20:45:57,287 [wrapper] pandaids: 7057888246
[2026-03-26 16:45:57] 2026-03-26 20:45:57,312 [wrapper] cleanup supervisor_pilot  224980 90033
[2026-03-26 16:45:57] 2026-03-26 20:45:57,314 [wrapper] Test setup, not cleaning
[2026-03-26 16:45:57] 2026-03-26 20:45:57,316 [wrapper] apfmon messages muted
[2026-03-26 16:45:57] 2026-03-26 20:45:57,318 [wrapper] ==== wrapper stdout END ====
[2026-03-26 16:45:57] 2026-03-26 20:45:57,320 [wrapper] ==== wrapper stderr END ====
[2026-03-26 16:45:57]  *** Error codes and diagnostics ***
[2026-03-26 16:45:57]     "exeErrorCode": 0,
[2026-03-26 16:45:57]     "exeErrorDiag": "",
[2026-03-26 16:45:57]     "pilotErrorCode": 0,
[2026-03-26 16:45:57]     "pilotErrorDiag": "",
[2026-03-26 16:45:57]  *** Listing of results directory ***
[2026-03-26 16:45:57] total 431032
[2026-03-26 16:45:57] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 17 21:12 pilot3.tar.gz
[2026-03-26 16:45:57] -rwx------ 1 whitlerd whitlerd     36322 Mar 17 21:15 runpilot2-wrapper.sh
[2026-03-26 16:45:57] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 17 21:19 queuedata.json
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 26 06:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 16:45:57] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 26 06:53 run_atlas
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 26 06:53 job.xml
[2026-03-26 16:45:57] -rw-r--r-- 2 whitlerd whitlerd 220769635 Mar 26 06:53 EVNT.49129395._000001.pool.root.1
[2026-03-26 16:45:57] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 26 06:53 start_atlas.sh
[2026-03-26 16:45:57] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 26 06:53 shared
[2026-03-26 16:45:57] -rw-r--r-- 2 whitlerd whitlerd    597552 Mar 26 06:53 input.tar.gz
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd      8862 Mar 26 06:53 init_data.xml
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 26 06:53 boinc_setup_complete
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 26 06:53 boinc_lockfile
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd      2663 Mar 26 06:53 pandaJob.out
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd   1012192 Mar 26 06:53 agis_schedconf.cvmfs.json
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd       427 Mar 26 06:53 workernode_map.json
[2026-03-26 16:45:57] drwx------ 5 whitlerd whitlerd      4096 Mar 26 06:53 pilot3
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd 205205806 Mar 26 16:44 HITS.49178662._000004.pool.root.1
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar 26 16:44 boinc_task_state.xml
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd      1037 Mar 26 16:45 memory_monitor_summary.json
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd   1511579 Mar 26 16:45 agis_ddmendpoints.agis.ALL.json
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd    692129 Mar 26 16:45 log.49178662._000004.job.log.tgz.1
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd      6329 Mar 26 16:45 heartbeat.json
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd        95 Mar 26 16:45 pilot_heartbeat.json
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 26 16:45 boinc_mmap_file
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd        29 Mar 26 16:45 wrapper_checkpoint.txt
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd      4903 Mar 26 16:45 pilotlog.txt
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd   5031475 Mar 26 16:45 log.49178662._000004.job.log.1
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd       357 Mar 26 16:45 output.list
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 26 16:45 runtime_log
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd   5744640 Mar 26 16:45 result.tar.gz
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd      8985 Mar 26 16:45 runtime_log.err
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd       648 Mar 26 16:45 dsdMDmqguM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWOyLDmuiBcWm.diag
[2026-03-26 16:45:57] -rw-rw-r-- 1 whitlerd whitlerd     21080 Mar 26 16:45 stderr.txt
[2026-03-26 16:45:57] HITS file was successfully produced:
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd 205205806 Mar 26 16:44 shared/HITS.pool.root.1
[2026-03-26 16:45:57]  *** Contents of shared directory: ***
[2026-03-26 16:45:57] total 422216
[2026-03-26 16:45:57] -rw-r--r-- 2 whitlerd whitlerd 220769635 Mar 26 06:53 ATLAS.root_0
[2026-03-26 16:45:57] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 26 06:53 start_atlas.sh
[2026-03-26 16:45:57] -rw-r--r-- 2 whitlerd whitlerd    597552 Mar 26 06:53 input.tar.gz
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd 205205806 Mar 26 16:44 HITS.pool.root.1
[2026-03-26 16:45:57] -rw------- 1 whitlerd whitlerd   5744640 Mar 26 16:45 result.tar.gz
16:45:59 (86212): run_atlas exited; CPU time 141597.583200
16:45:59 (86212): called boinc_finish(0)

</stderr_txt>
]]>

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