Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:59 (920427): wrapper (7.7.26015): starting
05:20:59 (920427): wrapper: running run_atlas (--nthreads 10)
[2026-03-26 05:20:59] Arguments: --nthreads 10
[2026-03-26 05:20:59] Threads: 10
[2026-03-26 05:20:59] Checking for CVMFS
[2026-03-26 05:21:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 05:21:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 05:21:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 05:21:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 05:21:00] 2.13.3.0 1684472 126125 373752 157714 1 56 25409063 40960001 10631 16776704 0 201203683 99.651 196744428 38060 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-26 05:21:00] CVMFS is ok
[2026-03-26 05:21:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 05:21:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 05:21:00] Further information can be found at the LHC@home message board.
[2026-03-26 05:21:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 05:21:00] Checking for apptainer binary...
[2026-03-26 05:21:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 05:21:00] Running /usr/bin/apptainer --version
[2026-03-26 05:21:00] apptainer version 1.4.5-2.el9
[2026-03-26 05:21:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 05:21:00] c-206-36.aglt2.org
[2026-03-26 05:21:00] apptainer works
[2026-03-26 05:21:00] Set ATHENA_PROC_NUMBER=10
[2026-03-26 05:21:00] Set ATHENA_CORE_NUMBER=10
[2026-03-26 05:21:00] Starting ATLAS job with PandaID=7057936809
[2026-03-26 05:21:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:12:31 (1169947): wrapper (7.7.26015): starting
07:12:31 (1169947): wrapper: running run_atlas (--nthreads 10)
[2026-03-26 07:12:31] Arguments: --nthreads 10
[2026-03-26 07:12:31] Threads: 10
[2026-03-26 07:12:31] This job has been restarted, cleaning up previous attempt
[2026-03-26 07:12:31] Checking for CVMFS
[2026-03-26 07:12:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 07:12:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 07:12:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 07:12:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 07:12:32] 2.13.3.0 1684472 126237 373752 157717 1 54 26255470 40960000 11471 16776704 0 201387247 99.651 196780639 38061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-26 07:12:32] CVMFS is ok
[2026-03-26 07:12:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 07:12:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 07:12:32] Further information can be found at the LHC@home message board.
[2026-03-26 07:12:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 07:12:32] Checking for apptainer binary...
[2026-03-26 07:12:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 07:12:32] Running /usr/bin/apptainer --version
[2026-03-26 07:12:33] apptainer version 1.4.5-2.el9
[2026-03-26 07:12:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 07:12:33] c-206-36.aglt2.org
[2026-03-26 07:12:33] apptainer works
[2026-03-26 07:12:33] Set ATHENA_PROC_NUMBER=10
[2026-03-26 07:12:33] Set ATHENA_CORE_NUMBER=10
[2026-03-26 07:12:33] Starting ATLAS job with PandaID=7057936809
[2026-03-26 07:12:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 12:03:00]  *** The last 200 lines of the pilot log: ***
[2026-03-26 12:03:00] 2026-03-26 16:02:08,014 | INFO     | job 7057936809 has finished - writing final server update
[2026-03-26 12:03:00] 2026-03-26 16:02:08,014 | INFO     | total number of processed events: 400 (read)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,037 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7057936809/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,037 | INFO     | extracted standard info from prmon json
[2026-03-26 12:03:00] 2026-03-26 16:02:08,037 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 12:03:00] 2026-03-26 16:02:08,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 12:03:00] 2026-03-26 16:02:08,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 12:03:00] 2026-03-26 16:02:08,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 12:03:00] 2026-03-26 16:02:08,050 | INFO     | fitting pss+swap vs Time
[2026-03-26 12:03:00] 2026-03-26 16:02:08,050 | INFO     | sum of square deviations: 7102968308.573941
[2026-03-26 12:03:00] 2026-03-26 16:02:08,052 | INFO     | sum of deviations: -162640996494.1022
[2026-03-26 12:03:00] 2026-03-26 16:02:08,052 | INFO     | mean x: 1774532277.0387323
[2026-03-26 12:03:00] 2026-03-26 16:02:08,052 | INFO     | mean y: 2723689.8274647887
[2026-03-26 12:03:00] 2026-03-26 16:02:08,052 | INFO     | intersect: 40635271282.66222
[2026-03-26 12:03:00] 2026-03-26 16:02:08,053 | INFO     | chi2: 3.8782423888381174
[2026-03-26 12:03:00] 2026-03-26 16:02:08,053 | INFO     | sum of square deviations: 6734414237.1899605
[2026-03-26 12:03:00] 2026-03-26 16:02:08,064 | INFO     | sum of deviations: -119853510270.337
[2026-03-26 12:03:00] 2026-03-26 16:02:08,064 | INFO     | mean x: 1774532124.544803
[2026-03-26 12:03:00] 2026-03-26 16:02:08,064 | INFO     | mean y: 2741225.146953405
[2026-03-26 12:03:00] 2026-03-26 16:02:08,064 | INFO     | intersect: 31584389862.032585
[2026-03-26 12:03:00] 2026-03-26 16:02:08,065 | INFO     | chi2: 2.4383611580746285
[2026-03-26 12:03:00] 2026-03-26 16:02:08,065 | INFO     | current chi2=2.4383611580746285 (change=37.127159326286026 %)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,065 | INFO     | sum of square deviations: 6378768833.635007
[2026-03-26 12:03:00] 2026-03-26 16:02:08,076 | INFO     | sum of deviations: -116064230018.40877
[2026-03-26 12:03:00] 2026-03-26 16:02:08,078 | INFO     | mean x: 1774531972.0364964
[2026-03-26 12:03:00] 2026-03-26 16:02:08,078 | INFO     | mean y: 2742850.2408759124
[2026-03-26 12:03:00] 2026-03-26 16:02:08,078 | INFO     | intersect: 32291056214.325615
[2026-03-26 12:03:00] 2026-03-26 16:02:08,079 | INFO     | chi2: 2.432529915960269
[2026-03-26 12:03:00] 2026-03-26 16:02:08,079 | INFO     | current chi2=2.432529915960269 (change=0.23914595649824974 %)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,079 | INFO     | right removable region: 273
[2026-03-26 12:03:00] 2026-03-26 16:02:08,084 | INFO     | sum of square deviations: 6734337987.096787
[2026-03-26 12:03:00] 2026-03-26 16:02:08,086 | INFO     | sum of deviations: -218691609838.70966
[2026-03-26 12:03:00] 2026-03-26 16:02:08,086 | INFO     | mean x: 1774532429.548387
[2026-03-26 12:03:00] 2026-03-26 16:02:08,086 | INFO     | mean y: 2746710.0896057347
[2026-03-26 12:03:00] 2026-03-26 16:02:08,087 | INFO     | intersect: 57629102035.95809
[2026-03-26 12:03:00] 2026-03-26 16:02:08,087 | INFO     | chi2: 1.9930732386096346
[2026-03-26 12:03:00] 2026-03-26 16:02:08,087 | INFO     | current chi2=1.9930732386096346 (change=48.60885321799756 %)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,087 | INFO     | sum of square deviations: 6378735344.383216
[2026-03-26 12:03:00] 2026-03-26 16:02:08,101 | INFO     | sum of deviations: -215256010101.97827
[2026-03-26 12:03:00] 2026-03-26 16:02:08,101 | INFO     | mean x: 1774532582.0474453
[2026-03-26 12:03:00] 2026-03-26 16:02:08,101 | INFO     | mean y: 2745207.4598540147
[2026-03-26 12:03:00] 2026-03-26 16:02:08,101 | INFO     | intersect: 59885901159.970924
[2026-03-26 12:03:00] 2026-03-26 16:02:08,102 | INFO     | chi2: 1.962555110225631
[2026-03-26 12:03:00] 2026-03-26 16:02:08,102 | INFO     | current chi2=1.962555110225631 (change=1.5312095809029629 %)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,102 | INFO     | left removable region: 20
[2026-03-26 12:03:00] 2026-03-26 16:02:08,102 | INFO     | sum of square deviations: 5021593398.727278
[2026-03-26 12:03:00] 2026-03-26 16:02:08,104 | INFO     | sum of deviations: -148182268824.99997
[2026-03-26 12:03:00] 2026-03-26 16:02:08,104 | INFO     | mean x: 1774532551.5454545
[2026-03-26 12:03:00] 2026-03-26 16:02:08,104 | INFO     | mean y: 2756779.6086956523
[2026-03-26 12:03:00] 2026-03-26 16:02:08,104 | INFO     | intersect: 52367462304.844444
[2026-03-26 12:03:00] 2026-03-26 16:02:08,112 | INFO     | monitor loop #1094: job 0:7057936809 is in state 'finished'
[2026-03-26 12:03:00] 2026-03-26 16:02:08,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,113 | INFO     | chi2: 0.46288369230209414
[2026-03-26 12:03:00] 2026-03-26 16:02:08,113 | INFO     | current memory leak: -29.51 B/s (using 253 data points, chi2=0.46)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,113 | INFO     | could have reported an average CPU frequency of 3228 MHz (13 samples)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | ..............................
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | . Timing measurements:
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | . get job = 0 s
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | . initial setup = 4 s
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | . payload setup = 19 s
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | . stage-in = 0 s
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | . payload execution = 17289 s
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | . stage-out = 7 s
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | . log creation = 1 s
[2026-03-26 12:03:00] 2026-03-26 16:02:08,114 | INFO     | ..............................
[2026-03-26 12:03:00] 2026-03-26 16:02:08,800 | INFO     | 
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | job summary report
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | --------------------------------------------------
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | PanDA job id: 7057936809
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | task id: 49191969
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | errors: (none)
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | pilot state: finished 
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | transexitcode: 0
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | exeerrorcode: 0
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | exeerrordiag: 
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | exitcode: 0
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | exitmsg: OK
[2026-03-26 12:03:00] 2026-03-26 16:02:08,801 | INFO     | cpuconsumptiontime: 58018 s
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | nevents: 400
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | neventsw: 0
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | pid: 1177818
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | pgrp: 1177818
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | corecount: 10
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | event service: False
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | sizes: {0: 2279762, 1: 2280279, 17314: 2312383, 17323: 2321409, 17324: 2321465, 17325: 2321659}
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | --------------------------------------------------
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | 
[2026-03-26 12:03:00] 2026-03-26 16:02:08,802 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 12:03:00] 2026-03-26 16:02:09,058 | INFO     | job 7057936809 has completed (purged errors)
[2026-03-26 12:03:00] 2026-03-26 16:02:09,059 | INFO     | overall cleanup function is called
[2026-03-26 12:03:00] 2026-03-26 16:02:10,093 | INFO     | --- collectZombieJob: --- 10, [1177818]
[2026-03-26 12:03:00] 2026-03-26 16:02:10,093 | INFO     | zombie collector waiting for pid 1177818
[2026-03-26 12:03:00] 2026-03-26 16:02:10,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 12:03:00] 2026-03-26 16:02:10,094 | INFO     | collected zombie processes
[2026-03-26 12:03:00] 2026-03-26 16:02:10,094 | INFO     | will attempt to kill all subprocesses of pid=1177818
[2026-03-26 12:03:00] 2026-03-26 16:02:11,961 | INFO     | process IDs to be killed: [1177818] (in reverse order)
[2026-03-26 12:03:00] 2026-03-26 16:02:13,142 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 12:03:00] 2026-03-26 16:02:13,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 12:03:00] 2026-03-26 16:02:13,156 | INFO     | did not find any defunct processes belonging to 1177818
[2026-03-26 12:03:00] 2026-03-26 16:02:13,167 | INFO     | did not find any defunct processes belonging to 1177818
[2026-03-26 12:03:00] 2026-03-26 16:02:13,168 | INFO     | ready for new job
[2026-03-26 12:03:00] 2026-03-26 16:02:13,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 12:03:00] 2026-03-26 16:02:13,170 | INFO     | **************************************
[2026-03-26 12:03:00] 2026-03-26 16:02:13,170 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 12:03:00] 2026-03-26 16:02:13,170 | INFO     | **************************************
[2026-03-26 12:03:00] 2026-03-26 16:02:13,170 | INFO     | 
[2026-03-26 12:03:00] 2026-03-26 16:02:13,174 | INFO     | architecture information:
[2026-03-26 12:03:00] 2026-03-26 16:02:13,174 | INFO     | executing command: cat /etc/os-release
[2026-03-26 12:03:00] 2026-03-26 16:02:13,189 | INFO     | cat /etc/os-release:
[2026-03-26 12:03:00] NAME="CentOS Linux"
[2026-03-26 12:03:00] VERSION="7 (Core)"
[2026-03-26 12:03:00] ID="centos"
[2026-03-26 12:03:00] ID_LIKE="rhel fedora"
[2026-03-26 12:03:00] VERSION_ID="7"
[2026-03-26 12:03:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 12:03:00] ANSI_COLOR="0;31"
[2026-03-26 12:03:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 12:03:00] HOME_URL="https://www.centos.org/"
[2026-03-26 12:03:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 12:03:00] 
[2026-03-26 12:03:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 12:03:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 12:03:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 12:03:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 12:03:00] 
[2026-03-26 12:03:00] 2026-03-26 16:02:13,189 | INFO     | **************************************
[2026-03-26 12:03:00] 2026-03-26 16:02:13,693 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-26 12:03:00] 2026-03-26 16:02:13,845 | INFO     | sufficient remaining disk space (85841674240 B)
[2026-03-26 12:03:00] 2026-03-26 16:02:13,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 12:03:00] 2026-03-26 16:02:13,845 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 12:03:00] 2026-03-26 16:02:13,845 | INFO     | update_server=False
[2026-03-26 12:03:00] 2026-03-26 16:02:13,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 12:03:00] 2026-03-26 16:02:13,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 12:03:00] 2026-03-26 16:02:13,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 12:03:00] 2026-03-26 16:02:14,074 | INFO     | all job control threads have been joined
[2026-03-26 12:03:00] 2026-03-26 16:02:14,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 12:03:00] 2026-03-26 16:02:14,167 | INFO     | aborting loop
[2026-03-26 12:03:00] 2026-03-26 16:02:14,241 | INFO     | all data control threads have been joined
[2026-03-26 12:03:00] 2026-03-26 16:02:14,851 | INFO     | [job] retrieve thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:14,854 | INFO     | [job] queue monitor thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:14,911 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:14,968 | INFO     | [data] copytool_in thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:15,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 12:03:00] 2026-03-26 16:02:15,063 | INFO     | all payload control threads have been joined
[2026-03-26 12:03:00] 2026-03-26 16:02:15,071 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:15,082 | INFO     | [job] control thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:15,172 | INFO     | [job] job monitor thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:15,247 | INFO     | [data] control thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:15,371 | INFO     | [payload] validate_post thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:15,422 | INFO     | [job] validate thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:15,978 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:16,087 | INFO     | [payload] control thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:16,162 | INFO     | [payload] failed_post thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:16,256 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:17,064 | INFO     | [data] copytool_out thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:17,858 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 12:03:00] 2026-03-26 16:02:42,052 | INFO     | PID=1175342 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-26 12:03:00] 2026-03-26 16:02:42,052 | INFO     | .. there are 17 such processes running
[2026-03-26 12:03:00] 2026-03-26 16:02:42,053 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 12:03:00] 2026-03-26 16:02:42,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 12:03:00] 2026-03-26 16:02:42,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 12:03:00] 2026-03-26 16:02:52,815 | INFO     | [monitor] cgroup control has ended
[2026-03-26 12:03:00] 2026-03-26 16:02:53,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139933302630208)>', '<ExcThread(monitor, started 139932785964800)>']
[2026-03-26 12:03:00] 2026-03-26 16:02:54,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 12:03:00] 2026-03-26 16:02:54,127 | INFO     | [monitor] control thread has ended
[2026-03-26 12:03:00] 2026-03-26 16:02:58,565 | INFO     | all workflow threads have been joined
[2026-03-26 12:03:00] 2026-03-26 16:02:58,566 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 12:03:00] 2026-03-26 16:02:58,566 | INFO     | traces error code: 0
[2026-03-26 12:03:00] 2026-03-26 16:02:58,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 12:03:00] 2026-03-26 16:02:59,277 [wrapper] ==== pilot stdout END ====
[2026-03-26 12:03:00] 2026-03-26 16:02:59,310 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 12:03:00] 2026-03-26 16:02:59,358 [wrapper] pilotpid: 1175342
[2026-03-26 12:03:00] 2026-03-26 16:02:59,401 [wrapper] Pilot exit status: 0
[2026-03-26 12:03:00] 2026-03-26 16:02:59,502 [wrapper] pandaids: 7057936809 7057936809
[2026-03-26 12:03:00] 2026-03-26 16:02:59,798 [wrapper] cleanup supervisor_pilot 1829621 1175343
[2026-03-26 12:03:00] 2026-03-26 16:02:59,810 [wrapper] Test setup, not cleaning
[2026-03-26 12:03:00] 2026-03-26 16:02:59,813 [wrapper] apfmon messages muted
[2026-03-26 12:03:00] 2026-03-26 16:02:59,815 [wrapper] ==== wrapper stdout END ====
[2026-03-26 12:03:00] 2026-03-26 16:02:59,817 [wrapper] ==== wrapper stderr END ====
[2026-03-26 12:03:00]  *** Error codes and diagnostics ***
[2026-03-26 12:03:00]     "exeErrorCode": 0,
[2026-03-26 12:03:00]     "exeErrorDiag": "",
[2026-03-26 12:03:00]     "pilotErrorCode": 0,
[2026-03-26 12:03:00]     "pilotErrorDiag": "",
[2026-03-26 12:03:00]  *** Listing of results directory ***
[2026-03-26 12:03:00] total 717460
[2026-03-26 12:03:00] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas    585013 Mar 17 21:12 pilot3.tar.gz
[2026-03-26 12:03:00] -rwx------. 1 boincer umatlas     36322 Mar 17 21:13 runpilot2-wrapper.sh
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas      5111 Mar 17 21:14 queuedata.json
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas       100 Mar 26 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 12:03:00] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 26 05:20 run_atlas
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas       105 Mar 26 05:20 job.xml
[2026-03-26 12:03:00] -rw-r--r--. 3 boincer umatlas 253867311 Mar 26 05:20 EVNT.49129516._000001.pool.root.1
[2026-03-26 12:03:00] -rw-r--r--. 3 boincer umatlas 253867311 Mar 26 05:20 ATLAS.root_0
[2026-03-26 12:03:00] -rw-r--r--. 2 boincer umatlas     15845 Mar 26 05:20 start_atlas.sh
[2026-03-26 12:03:00] drwxrwx--x. 2 boincer umatlas      4096 Mar 26 05:20 shared
[2026-03-26 12:03:00] -rw-r--r--. 2 boincer umatlas    597525 Mar 26 05:20 input.tar.gz
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas         0 Mar 26 05:20 boinc_lockfile
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas      2579 Mar 26 07:12 pandaJob.out
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas        57 Mar 26 07:12 setup.sh.local
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas   1012192 Mar 26 07:13 agis_schedconf.cvmfs.json
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas       430 Mar 26 07:13 workernode_map.json
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas      6909 Mar 26 11:57 init_data.xml
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas 217501451 Mar 26 12:00 HITS.49191969._000002.pool.root.1
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas       530 Mar 26 12:00 boinc_task_state.xml
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas      1031 Mar 26 12:01 memory_monitor_summary.json
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas   1511579 Mar 26 12:02 agis_ddmendpoints.agis.ALL.json
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas    508642 Mar 26 12:02 log.49191969._000002.job.log.tgz.1
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas      6320 Mar 26 12:02 heartbeat.json
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas        96 Mar 26 12:02 pilot_heartbeat.json
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas        28 Mar 26 12:02 wrapper_checkpoint.txt
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas      4820 Mar 26 12:02 pilotlog.txt
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas   2236776 Mar 26 12:02 log.49191969._000002.job.log.1
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas       357 Mar 26 12:03 output.list
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas       620 Mar 26 12:03 runtime_log
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas   2764800 Mar 26 12:03 result.tar.gz
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas       782 Mar 26 12:03 T43MDmZeuM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpI1LDmA7Ajxn.diag
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas      9429 Mar 26 12:03 runtime_log.err
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas      8192 Mar 26 12:03 boinc_mmap_file
[2026-03-26 12:03:00] -rw-r--r--. 1 boincer umatlas     23286 Mar 26 12:03 stderr.txt
[2026-03-26 12:03:00] HITS file was successfully produced:
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas 217501451 Mar 26 12:00 shared/HITS.pool.root.1
[2026-03-26 12:03:00]  *** Contents of shared directory: ***
[2026-03-26 12:03:00] total 463628
[2026-03-26 12:03:00] -rw-r--r--. 3 boincer umatlas 253867311 Mar 26 05:20 ATLAS.root_0
[2026-03-26 12:03:00] -rw-r--r--. 2 boincer umatlas     15845 Mar 26 05:20 start_atlas.sh
[2026-03-26 12:03:00] -rw-r--r--. 2 boincer umatlas    597525 Mar 26 05:20 input.tar.gz
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas 217501451 Mar 26 12:00 HITS.pool.root.1
[2026-03-26 12:03:00] -rw-------. 1 boincer umatlas   2764800 Mar 26 12:03 result.tar.gz
12:03:22 (1169947): run_atlas exited; CPU time 58338.208276
12:03:22 (1169947): called boinc_finish(0)

</stderr_txt>
]]>

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