Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:11:22 (8730): wrapper (7.7.26015): starting
12:11:22 (8730): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 12:11:22] Arguments: --nthreads 8
[2026-03-26 12:11:22] Threads: 8
[2026-03-26 12:11:22] Checking for CVMFS
[2026-03-26 12:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 12:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 12:11:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 12:11:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 12:11:23] 2.11.0.0 8144 31561 54564 157717 0 2 2506500 4096001 0 130560 3 482167 98.497 1610695 253 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-26 12:11:23] CVMFS is ok
[2026-03-26 12:11:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 12:11:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 12:11:23] Further information can be found at the LHC@home message board.
[2026-03-26 12:11:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 12:11:23] Checking for apptainer binary...
[2026-03-26 12:11:23] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-26 12:11:23] apptainer is not installed, using version from CVMFS
[2026-03-26 12:11:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 12:11:23] WARNING: Environment variable TMPDIR already has value [/tmp/job_11399321/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node204
[2026-03-26 12:11:23] apptainer works
[2026-03-26 12:11:23] Set ATHENA_PROC_NUMBER=8
[2026-03-26 12:11:23] Set ATHENA_CORE_NUMBER=8
[2026-03-26 12:11:23] Starting ATLAS job with PandaID=7057758081
[2026-03-26 12:11:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11399321/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 13:46:46]  *** The last 200 lines of the pilot log: ***
[2026-03-26 13:46:46]  domain=
[2026-03-26 13:46:46]  filesize=354551
[2026-03-26 13:46:46]  filetype=log
[2026-03-26 13:46:46]  guid=74d59084-e9d2-4d2d-b613-1811e4f1073a
[2026-03-26 13:46:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-26 13:46:46]  is_altstaged=None
[2026-03-26 13:46:46]  is_tar=False
[2026-03-26 13:46:46]  lfn=log.49179159._000073.job.log.tgz.1
[2026-03-26 13:46:46]  mtime=0
[2026-03-26 13:46:46]  protocol_id=None
[2026-03-26 13:46:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-26 13:46:46]  replicas=None
[2026-03-26 13:46:46]  scope=mc23_13p6TeV
[2026-03-26 13:46:46]  status=None
[2026-03-26 13:46:46]  status_code=0
[2026-03-26 13:46:46]  storage_token=
[2026-03-26 13:46:46]  surl=/tmp/job_11399321/atlas/pilot/slots/0/PanDA_Pilot-7057758081/log.49179159._000073.job.log.tgz.1
[2026-03-26 13:46:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/6d/log.49179159._000073.job.log.tgz.1
[2026-03-26 13:46:46]  workdir=None
[2026-03-26 13:46:46] ]
[2026-03-26 13:46:46] 2026-03-26 12:45:57,231 | INFO     | transferring file log.49179159._000073.job.log.tgz.1 from /tmp/job_11399321/atlas/pilot/slots/0/PanDA_Pilot-7057758081/log.49179159._000073.job.log.tgz.1 to /tmp/j
[2026-03-26 13:46:46] 2026-03-26 12:45:57,231 | INFO     | executing command: /usr/bin/env mv /tmp/job_11399321/atlas/pilot/slots/0/PanDA_Pilot-7057758081/log.49179159._000073.job.log.tgz.1 /tmp/job_11399321/atlas/pilot/sl
[2026-03-26 13:46:46] 2026-03-26 12:45:57,239 | INFO     | adding to output.list: log.49179159._000073.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/6d/log.49179159._000073.job.log.tg
[2026-03-26 13:46:46] 2026-03-26 12:45:57,239 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-26 13:46:46] 2026-03-26 12:45:57,239 | INFO     | summary of transferred files:
[2026-03-26 13:46:46] 2026-03-26 12:45:57,240 | INFO     |  -- lfn=log.49179159._000073.job.log.tgz.1, status_code=0, status=transferred
[2026-03-26 13:46:46] 2026-03-26 12:45:57,240 | INFO     | stage-out finished correctly
[2026-03-26 13:46:46] 2026-03-26 12:45:57,311 | INFO     | monitor loop #427: job 0:7057758081 is in state 'finished'
[2026-03-26 13:46:46] 2026-03-26 12:45:57,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-26 13:46:46] 2026-03-26 12:45:57,488 | INFO     | time since job start (5667s) is within the limit (345600.0s)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,723 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-26 13:46:46] 2026-03-26 12:45:58,770 | INFO     | job 7057758081 has state=finished
[2026-03-26 13:46:46] 2026-03-26 12:45:58,770 | INFO     | preparing for final server update for job 7057758081 in state='finished'
[2026-03-26 13:46:46] 2026-03-26 12:45:58,770 | INFO     | reading metadata from: /tmp/job_11399321/atlas/pilot/slots/0/PanDA_Pilot-7057758081/jobReport.json
[2026-03-26 13:46:46] 2026-03-26 12:45:58,771 | INFO     | added worker_node to metadata from /tmp/job_11399321/atlas/pilot/slots/0/workernode_map.json
[2026-03-26 13:46:46] 2026-03-26 12:45:58,772 | INFO     | this job has now completed (state=finished)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,772 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,772 | INFO     | log transfer has been attempted: DONE
[2026-03-26 13:46:46] 2026-03-26 12:45:58,772 | INFO     | job 7057758081 has finished - writing final server update
[2026-03-26 13:46:46] 2026-03-26 12:45:58,772 | INFO     | total number of processed events: 400 (read)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,789 | INFO     | using path: /tmp/job_11399321/atlas/pilot/slots/0/PanDA_Pilot-7057758081/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,789 | INFO     | extracted standard info from prmon json
[2026-03-26 13:46:46] 2026-03-26 12:45:58,790 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 13:46:46] 2026-03-26 12:45:58,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 13:46:46] 2026-03-26 12:45:58,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 13:46:46] 2026-03-26 12:45:58,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 13:46:46] 2026-03-26 12:45:58,791 | INFO     | fitting pss+swap vs Time
[2026-03-26 13:46:46] 2026-03-26 12:45:58,791 | INFO     | sum of square deviations: 197203697.5
[2026-03-26 13:46:46] 2026-03-26 12:45:58,791 | INFO     | sum of deviations: 1712203540.5
[2026-03-26 13:46:46] 2026-03-26 12:45:58,791 | INFO     | mean x: 1774526404.5
[2026-03-26 13:46:46] 2026-03-26 12:45:58,791 | INFO     | mean y: 2538916.593023256
[2026-03-26 13:46:46] 2026-03-26 12:45:58,791 | INFO     | intersect: -15404628550.414715
[2026-03-26 13:46:46] 2026-03-26 12:45:58,791 | INFO     | chi2: 0.0008399426200556887
[2026-03-26 13:46:46] 2026-03-26 12:45:58,791 | INFO     | current memory leak: 8.68 B/s (using 86 data points, chi2=0.00)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,791 | INFO     | could have reported an average CPU frequency of 2365 MHz (7 samples)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | ..............................
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | . Timing measurements:
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | . get job = 0 s
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | . initial setup = 2 s
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | . payload setup = 3 s
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | . stage-in = 0 s
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | . payload execution = 5648 s
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | . stage-out = 0 s
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | . log creation = 0 s
[2026-03-26 13:46:46] 2026-03-26 12:45:58,792 | INFO     | ..............................
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | 
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | job summary report
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | --------------------------------------------------
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | PanDA job id: 7057758081
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | task id: 49179159
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | errors: (none)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | pilot state: finished 
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | transexitcode: 0
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | exeerrorcode: 0
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | exeerrordiag: 
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | exitcode: 0
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | exitmsg: OK
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | cpuconsumptiontime: 42185 s
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | nevents: 400
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | neventsw: 0
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | pid: 19269
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | pgrp: 19269
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | corecount: 8
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | event service: False
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | sizes: {0: 2280447, 10: 2280447, 5656: 2316325, 5658: 2316519}
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | --------------------------------------------------
[2026-03-26 13:46:46] 2026-03-26 12:45:58,839 | INFO     | 
[2026-03-26 13:46:46] 2026-03-26 12:45:58,840 | INFO     | executing command: ls -lF /tmp/job_11399321/atlas/pilot/slots/0
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,850 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,850 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 13:46:46] 2026-03-26 12:45:58,850 | INFO     | job 7057758081 has completed (purged errors)
[2026-03-26 13:46:46] 2026-03-26 12:45:58,850 | INFO     | overall cleanup function is called
[2026-03-26 13:46:46] 2026-03-26 12:45:59,856 | INFO     | --- collectZombieJob: --- 10, [19269]
[2026-03-26 13:46:46] 2026-03-26 12:45:59,856 | INFO     | zombie collector waiting for pid 19269
[2026-03-26 13:46:46] 2026-03-26 12:45:59,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 13:46:46] 2026-03-26 12:45:59,856 | INFO     | collected zombie processes
[2026-03-26 13:46:46] 2026-03-26 12:45:59,856 | INFO     | will attempt to kill all subprocesses of pid=19269
[2026-03-26 13:46:46] 2026-03-26 12:45:59,955 | INFO     | process IDs to be killed: [19269] (in reverse order)
[2026-03-26 13:46:46] 2026-03-26 12:45:59,991 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 13:46:46] 2026-03-26 12:45:59,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 13:46:46] 2026-03-26 12:45:59,995 | INFO     | did not find any defunct processes belonging to 19269
[2026-03-26 13:46:46] 2026-03-26 12:45:59,998 | INFO     | did not find any defunct processes belonging to 19269
[2026-03-26 13:46:46] 2026-03-26 12:45:59,998 | INFO     | ready for new job
[2026-03-26 13:46:46] 2026-03-26 12:45:59,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 13:46:46] 2026-03-26 12:45:59,999 | INFO     | **************************************
[2026-03-26 13:46:46] 2026-03-26 12:45:59,999 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 13:46:46] 2026-03-26 12:45:59,999 | INFO     | **************************************
[2026-03-26 13:46:46] 2026-03-26 12:45:59,999 | INFO     | 
[2026-03-26 13:46:46] 2026-03-26 12:46:00,014 | INFO     | architecture information:
[2026-03-26 13:46:46] 2026-03-26 12:46:00,014 | INFO     | executing command: cat /etc/os-release
[2026-03-26 13:46:46] 2026-03-26 12:46:00,021 | INFO     | cat /etc/os-release:
[2026-03-26 13:46:46] NAME="CentOS Linux"
[2026-03-26 13:46:46] VERSION="7 (Core)"
[2026-03-26 13:46:46] ID="centos"
[2026-03-26 13:46:46] ID_LIKE="rhel fedora"
[2026-03-26 13:46:46] VERSION_ID="7"
[2026-03-26 13:46:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 13:46:46] ANSI_COLOR="0;31"
[2026-03-26 13:46:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 13:46:46] HOME_URL="https://www.centos.org/"
[2026-03-26 13:46:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 13:46:46] 
[2026-03-26 13:46:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 13:46:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 13:46:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 13:46:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 13:46:46] 
[2026-03-26 13:46:46] 2026-03-26 12:46:00,021 | INFO     | **************************************
[2026-03-26 13:46:46] 2026-03-26 12:46:00,523 | INFO     | executing command: df -mP /tmp/job_11399321/atlas/pilot/slots/0
[2026-03-26 13:46:46] 2026-03-26 12:46:00,530 | INFO     | sufficient remaining disk space (226317303808 B)
[2026-03-26 13:46:46] 2026-03-26 12:46:00,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 13:46:46] 2026-03-26 12:46:00,531 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 13:46:46] 2026-03-26 12:46:00,531 | INFO     | update_server=False
[2026-03-26 13:46:46] 2026-03-26 12:46:00,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 13:46:46] 2026-03-26 12:46:00,531 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 13:46:46] 2026-03-26 12:46:00,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 13:46:46] 2026-03-26 12:46:00,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 13:46:46] 2026-03-26 12:46:00,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 13:46:46] 2026-03-26 12:46:00,819 | INFO     | aborting loop
[2026-03-26 13:46:46] 2026-03-26 12:46:01,326 | INFO     | all job control threads have been joined
[2026-03-26 13:46:46] 2026-03-26 12:46:01,535 | INFO     | [job] retrieve thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:01,536 | INFO     | [job] queue monitor thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:01,550 | INFO     | all data control threads have been joined
[2026-03-26 13:46:46] 2026-03-26 12:46:01,649 | INFO     | all payload control threads have been joined
[2026-03-26 13:46:46] 2026-03-26 12:46:01,699 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:01,824 | INFO     | [job] job monitor thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:01,906 | INFO     | [data] copytool_in thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,312 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,331 | INFO     | [job] control thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,511 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,536 | INFO     | [data] copytool_out thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,555 | INFO     | [data] control thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,653 | INFO     | [payload] control thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,654 | INFO     | [payload] validate_post thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,808 | INFO     | [job] validate thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,849 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:02,931 | INFO     | [payload] failed_post thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:04,536 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 13:46:46] 2026-03-26 12:46:30,676 | INFO     | PID=13619 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-26 13:46:46] 2026-03-26 12:46:30,676 | INFO     | .. there are 4 such processes running
[2026-03-26 13:46:46] 2026-03-26 12:46:30,676 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 13:46:46] 2026-03-26 12:46:30,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 13:46:46] 2026-03-26 12:46:30,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 13:46:46] 2026-03-26 12:46:39,485 | INFO     | [monitor] cgroup control has ended
[2026-03-26 13:46:46] 2026-03-26 12:46:40,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067393280)>']
[2026-03-26 13:46:46] 2026-03-26 12:46:41,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 13:46:46] 2026-03-26 12:46:41,731 | INFO     | [monitor] control thread has ended
[2026-03-26 13:46:46] 2026-03-26 12:46:45,947 | INFO     | all workflow threads have been joined
[2026-03-26 13:46:46] 2026-03-26 12:46:45,947 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 13:46:46] 2026-03-26 12:46:45,947 | INFO     | traces error code: 0
[2026-03-26 13:46:46] 2026-03-26 12:46:45,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 13:46:46] 2026-03-26 12:46:46,000 [wrapper] ==== pilot stdout END ====
[2026-03-26 13:46:46] 2026-03-26 12:46:46,002 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 13:46:46] 2026-03-26 12:46:46,003 [wrapper] pilotpid: 13619
[2026-03-26 13:46:46] 2026-03-26 12:46:46,004 [wrapper] Pilot exit status: 0
[2026-03-26 13:46:46] 2026-03-26 12:46:46,008 [wrapper] pandaids: 7057758081
[2026-03-26 13:46:46] 2026-03-26 12:46:46,031 [wrapper] cleanup supervisor_pilot 16897 13620
[2026-03-26 13:46:46] 2026-03-26 12:46:46,033 [wrapper] Test setup, not cleaning
[2026-03-26 13:46:46] 2026-03-26 12:46:46,034 [wrapper] apfmon messages muted
[2026-03-26 13:46:46] 2026-03-26 12:46:46,035 [wrapper] ==== wrapper stdout END ====
[2026-03-26 13:46:46] 2026-03-26 12:46:46,036 [wrapper] ==== wrapper stderr END ====
[2026-03-26 13:46:46]  *** Error codes and diagnostics ***
[2026-03-26 13:46:46]     "exeErrorCode": 0,
[2026-03-26 13:46:46]     "exeErrorDiag": "",
[2026-03-26 13:46:46]     "pilotErrorCode": 0,
[2026-03-26 13:46:46]     "pilotErrorDiag": "",
[2026-03-26 13:46:46]  *** Listing of results directory ***
[2026-03-26 13:46:46] total 449000
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user    585013 Mar 18 02:12 pilot3.tar.gz
[2026-03-26 13:46:46] -rwx------ 1 mf493845 unix-user     36322 Mar 18 02:13 runpilot2-wrapper.sh
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user      5111 Mar 18 02:14 queuedata.json
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user       100 Mar 26 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 13:46:46] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 26 11:10 run_atlas
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user       105 Mar 26 11:10 job.xml
[2026-03-26 13:46:46] -rw-r--r-- 2 mf493845 unix-user 238358759 Mar 26 12:11 EVNT.49130767._000003.pool.root.1
[2026-03-26 13:46:46] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 26 12:11 start_atlas.sh
[2026-03-26 13:46:46] drwxrwx--x 2 mf493845 unix-user       100 Mar 26 12:11 shared
[2026-03-26 13:46:46] -rw-r--r-- 2 mf493845 unix-user    597547 Mar 26 12:11 input.tar.gz
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user      6391 Mar 26 12:11 init_data.xml
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user         0 Mar 26 12:11 boinc_setup_complete
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user      8192 Mar 26 12:11 boinc_mmap_file
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user         0 Mar 26 12:11 boinc_lockfile
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user      2634 Mar 26 12:11 pandaJob.out
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user   1012192 Mar 26 12:11 agis_schedconf.cvmfs.json
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user   1511579 Mar 26 12:11 agis_ddmendpoints.agis.ALL.json
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user       416 Mar 26 12:11 workernode_map.json
[2026-03-26 13:46:46] drwx------ 5 mf493845 unix-user       440 Mar 26 12:11 pilot3
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user 215095836 Mar 26 13:45 HITS.49179159._000073.pool.root.1
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user        95 Mar 26 13:45 pilot_heartbeat.json
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user      1015 Mar 26 13:45 memory_monitor_summary.json
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user    354551 Mar 26 13:45 log.49179159._000073.job.log.tgz.1
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user      6294 Mar 26 13:45 heartbeat.json
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user      4831 Mar 26 13:46 pilotlog.txt
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user    844915 Mar 26 13:46 log.49179159._000073.job.log.1
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user       357 Mar 26 13:46 output.list
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user       620 Mar 26 13:46 runtime_log
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user   1218560 Mar 26 13:46 result.tar.gz
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user      9219 Mar 26 13:46 runtime_log.err
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user       646 Mar 26 13:46 0HhKDmHeuM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHJyLDmADfhLo.diag
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user     21588 Mar 26 13:46 stderr.txt
[2026-03-26 13:46:46] HITS file was successfully produced:
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user 215095836 Mar 26 13:45 shared/HITS.pool.root.1
[2026-03-26 13:46:46]  *** Contents of shared directory: ***
[2026-03-26 13:46:46] total 444624
[2026-03-26 13:46:46] -rw-r--r-- 2 mf493845 unix-user 238358759 Mar 26 12:11 ATLAS.root_0
[2026-03-26 13:46:46] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 26 12:11 start_atlas.sh
[2026-03-26 13:46:46] -rw-r--r-- 2 mf493845 unix-user    597547 Mar 26 12:11 input.tar.gz
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user 215095836 Mar 26 13:45 HITS.pool.root.1
[2026-03-26 13:46:46] -rw------- 1 mf493845 unix-user   1218560 Mar 26 13:46 result.tar.gz
13:46:47 (8730): run_atlas exited; CPU time 42264.298393
13:46:47 (8730): called boinc_finish(0)

</stderr_txt>
]]>

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