Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:20:08 (1898830): wrapper (7.7.26015): starting
23:20:08 (1898830): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 23:20:08] Arguments: --nthreads 8
[2026-03-25 23:20:08] Threads: 8
[2026-03-25 23:20:08] Checking for CVMFS
[2026-03-25 23:20:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 23:20:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 23:20:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 23:20:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 23:20:10] 2.13.3.0 2389534 31143 428668 157706 2 106 29582373 32935936 20876 16776704 1 130985658 99.558 140447556 18950 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-25 23:20:10] CVMFS is ok
[2026-03-25 23:20:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 23:20:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 23:20:10] Further information can be found at the LHC@home message board.
[2026-03-25 23:20:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 23:20:10] Checking for apptainer binary...
[2026-03-25 23:20:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 23:20:10] Running /usr/bin/apptainer --version
[2026-03-25 23:20:10] apptainer version 1.4.5-2.el9
[2026-03-25 23:20:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 23:20:11] c7-11-16.aglt2.org
[2026-03-25 23:20:11] apptainer works
[2026-03-25 23:20:11] Set ATHENA_PROC_NUMBER=8
[2026-03-25 23:20:11] Set ATHENA_CORE_NUMBER=8
[2026-03-25 23:20:11] Starting ATLAS job with PandaID=7047737052
[2026-03-25 23:20:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:40:03 (1898830): BOINC client no longer exists - exiting
07:40:03 (1898830): timer handler: client dead, exiting
07:46:02 (3454207): wrapper (7.7.26015): starting
07:46:02 (3454207): wrapper: running run_atlas (--nthreads 11)
[2026-03-26 07:46:02] Arguments: --nthreads 11
[2026-03-26 07:46:02] Threads: 11
[2026-03-26 07:46:02] This job has been restarted, cleaning up previous attempt
[2026-03-26 07:46:03] Checking for CVMFS
[2026-03-26 07:46:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 07:46:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 07:46:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 07:46:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 07:46:04] 2.13.3.0 2389534 31649 438396 157718 1 391 21958553 32935937 19162 16776704 1 132463438 99.554 143318667 19036 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-26 07:46:04] CVMFS is ok
[2026-03-26 07:46:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 07:46:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 07:46:04] Further information can be found at the LHC@home message board.
[2026-03-26 07:46:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 07:46:04] Checking for apptainer binary...
[2026-03-26 07:46:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 07:46:04] Running /usr/bin/apptainer --version
[2026-03-26 07:46:04] apptainer version 1.4.5-2.el9
[2026-03-26 07:46:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 07:46:04] c7-11-16.aglt2.org
[2026-03-26 07:46:04] apptainer works
[2026-03-26 07:46:04] Set ATHENA_PROC_NUMBER=11
[2026-03-26 07:46:04] Set ATHENA_CORE_NUMBER=11
[2026-03-26 07:46:04] Starting ATLAS job with PandaID=7047737052
[2026-03-26 07:46:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 12:36:39]  *** The last 200 lines of the pilot log: ***
[2026-03-26 12:36:39] 2026-03-26 16:35:37,547 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7047737052/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,548 | INFO     | extracted standard info from prmon json
[2026-03-26 12:36:39] 2026-03-26 16:35:37,548 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 12:36:39] 2026-03-26 16:35:37,548 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 12:36:39] 2026-03-26 16:35:37,548 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 12:36:39] 2026-03-26 16:35:37,549 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 12:36:39] 2026-03-26 16:35:37,554 | INFO     | fitting pss+swap vs Time
[2026-03-26 12:36:39] 2026-03-26 16:35:37,554 | INFO     | sum of square deviations: 7027789345.879899
[2026-03-26 12:36:39] 2026-03-26 16:35:37,557 | INFO     | sum of deviations: 4842213318.31094
[2026-03-26 12:36:39] 2026-03-26 16:35:37,557 | INFO     | mean x: 1774534300.3992932
[2026-03-26 12:36:39] 2026-03-26 16:35:37,558 | INFO     | mean y: 2711202.554770318
[2026-03-26 12:36:39] 2026-03-26 16:35:37,558 | INFO     | intersect: -1219959711.4831657
[2026-03-26 12:36:39] 2026-03-26 16:35:37,558 | INFO     | chi2: 2.714022723832644
[2026-03-26 12:36:39] 2026-03-26 16:35:37,559 | INFO     | sum of square deviations: 6661854157.568366
[2026-03-26 12:36:39] 2026-03-26 16:35:37,561 | INFO     | sum of deviations: 24041320949.388493
[2026-03-26 12:36:39] 2026-03-26 16:35:37,561 | INFO     | mean x: 1774534147.9064748
[2026-03-26 12:36:39] 2026-03-26 16:35:37,561 | INFO     | mean y: 2719087.284172662
[2026-03-26 12:36:39] 2026-03-26 16:35:37,562 | INFO     | intersect: -6401225516.787022
[2026-03-26 12:36:39] 2026-03-26 16:35:37,562 | INFO     | chi2: 2.022623520286619
[2026-03-26 12:36:39] 2026-03-26 16:35:37,562 | INFO     | current chi2=2.022623520286619 (change=25.47507054655962 %)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,563 | INFO     | sum of square deviations: 6308849444.227147
[2026-03-26 12:36:39] 2026-03-26 16:35:37,565 | INFO     | sum of deviations: 23483135646.582333
[2026-03-26 12:36:39] 2026-03-26 16:35:37,565 | INFO     | mean x: 1774533995.4139194
[2026-03-26 12:36:39] 2026-03-26 16:35:37,565 | INFO     | mean y: 2718846.10989011
[2026-03-26 12:36:39] 2026-03-26 16:35:37,565 | INFO     | intersect: -6602546169.670128
[2026-03-26 12:36:39] 2026-03-26 16:35:37,566 | INFO     | chi2: 2.023315153819687
[2026-03-26 12:36:39] 2026-03-26 16:35:37,566 | INFO     | current chi2=2.023315153819687 (change=-0.034194872458023946 %)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,566 | INFO     | right removable region: 272
[2026-03-26 12:36:39] 2026-03-26 16:35:37,566 | INFO     | sum of square deviations: 6661785227.568366
[2026-03-26 12:36:39] 2026-03-26 16:35:37,569 | INFO     | sum of deviations: -52705727645.856125
[2026-03-26 12:36:39] 2026-03-26 16:35:37,569 | INFO     | mean x: 1774534452.9064748
[2026-03-26 12:36:39] 2026-03-26 16:35:37,569 | INFO     | mean y: 2735023.1978417267
[2026-03-26 12:36:39] 2026-03-26 16:35:37,569 | INFO     | intersect: 14042234403.338604
[2026-03-26 12:36:39] 2026-03-26 16:35:37,569 | INFO     | chi2: 0.8497033091799276
[2026-03-26 12:36:39] 2026-03-26 16:35:37,570 | INFO     | current chi2=0.8497033091799276 (change=68.69210778088079 %)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,570 | INFO     | sum of square deviations: 6308728298.051253
[2026-03-26 12:36:39] 2026-03-26 16:35:37,572 | INFO     | sum of deviations: -57519667490.02565
[2026-03-26 12:36:39] 2026-03-26 16:35:37,572 | INFO     | mean x: 1774534605.4102564
[2026-03-26 12:36:39] 2026-03-26 16:35:37,573 | INFO     | mean y: 2737069.794871795
[2026-03-26 12:36:39] 2026-03-26 16:35:37,573 | INFO     | intersect: 16182010550.992523
[2026-03-26 12:36:39] 2026-03-26 16:35:37,573 | INFO     | chi2: 0.8057019753305767
[2026-03-26 12:36:39] 2026-03-26 16:35:37,573 | INFO     | current chi2=0.8057019753305767 (change=5.178435034202446 %)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,573 | INFO     | left removable region: 20
[2026-03-26 12:36:39] 2026-03-26 16:35:37,574 | INFO     | sum of square deviations: 4962019520.412735
[2026-03-26 12:36:39] 2026-03-26 16:35:37,576 | INFO     | sum of deviations: -29129366396.063503
[2026-03-26 12:36:39] 2026-03-26 16:35:37,576 | INFO     | mean x: 1774534574.920635
[2026-03-26 12:36:39] 2026-03-26 16:35:37,576 | INFO     | mean y: 2741988.396825397
[2026-03-26 12:36:39] 2026-03-26 16:35:37,576 | INFO     | intersect: 10420086701.108955
[2026-03-26 12:36:39] 2026-03-26 16:35:37,577 | INFO     | chi2: 0.08944580887602349
[2026-03-26 12:36:39] 2026-03-26 16:35:37,577 | INFO     | current memory leak: -5.87 B/s (using 252 data points, chi2=0.09)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,577 | INFO     | could have reported an average CPU frequency of 3276 MHz (13 samples)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,577 | INFO     | ..............................
[2026-03-26 12:36:39] 2026-03-26 16:35:37,578 | INFO     | . Timing measurements:
[2026-03-26 12:36:39] 2026-03-26 16:35:37,578 | INFO     | . get job = 0 s
[2026-03-26 12:36:39] 2026-03-26 16:35:37,578 | INFO     | . initial setup = 4 s
[2026-03-26 12:36:39] 2026-03-26 16:35:37,578 | INFO     | . payload setup = 46 s
[2026-03-26 12:36:39] 2026-03-26 16:35:37,578 | INFO     | . stage-in = 0 s
[2026-03-26 12:36:39] 2026-03-26 16:35:37,578 | INFO     | . payload execution = 17249 s
[2026-03-26 12:36:39] 2026-03-26 16:35:37,578 | INFO     | . stage-out = 2 s
[2026-03-26 12:36:39] 2026-03-26 16:35:37,578 | INFO     | . log creation = 0 s
[2026-03-26 12:36:39] 2026-03-26 16:35:37,578 | INFO     | ..............................
[2026-03-26 12:36:39] 2026-03-26 16:35:37,649 | INFO     | 
[2026-03-26 12:36:39] 2026-03-26 16:35:37,649 | INFO     | job summary report
[2026-03-26 12:36:39] 2026-03-26 16:35:37,649 | INFO     | --------------------------------------------------
[2026-03-26 12:36:39] 2026-03-26 16:35:37,649 | INFO     | PanDA job id: 7047737052
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | task id: 48998032
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | errors: (none)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | pilot state: finished 
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | transexitcode: 0
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | exeerrorcode: 0
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | exeerrordiag: 
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | exitcode: 0
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | exitmsg: OK
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | cpuconsumptiontime: 50363 s
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | nevents: 400
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | neventsw: 0
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | pid: 3469259
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | pgrp: 3469259
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | corecount: 11
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | event service: False
[2026-03-26 12:36:39] 2026-03-26 16:35:37,650 | INFO     | sizes: {0: 2279743, 1: 2280260, 2: 2280260, 12: 2280288, 17299: 2312301, 17302: 2321483, 17303: 2321621}
[2026-03-26 12:36:39] 2026-03-26 16:35:37,651 | INFO     | --------------------------------------------------
[2026-03-26 12:36:39] 2026-03-26 16:35:37,651 | INFO     | 
[2026-03-26 12:36:39] 2026-03-26 16:35:37,651 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-26 12:36:39] 2026-03-26 16:35:37,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,675 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,677 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,677 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 12:36:39] 2026-03-26 16:35:37,677 | INFO     | job 7047737052 has completed (purged errors)
[2026-03-26 12:36:39] 2026-03-26 16:35:37,677 | INFO     | overall cleanup function is called
[2026-03-26 12:36:39] 2026-03-26 16:35:38,695 | INFO     | --- collectZombieJob: --- 10, [3469259]
[2026-03-26 12:36:39] 2026-03-26 16:35:38,695 | INFO     | zombie collector waiting for pid 3469259
[2026-03-26 12:36:39] 2026-03-26 16:35:38,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 12:36:39] 2026-03-26 16:35:38,695 | INFO     | collected zombie processes
[2026-03-26 12:36:39] 2026-03-26 16:35:38,695 | INFO     | will attempt to kill all subprocesses of pid=3469259
[2026-03-26 12:36:39] 2026-03-26 16:35:39,509 | INFO     | PID=3462669 has CPU usage=16.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-26 12:36:39] 2026-03-26 16:35:39,509 | INFO     | .. there are 31 such processes running
[2026-03-26 12:36:39] 2026-03-26 16:35:39,539 | INFO     | process IDs to be killed: [3469259] (in reverse order)
[2026-03-26 12:36:39] 2026-03-26 16:35:39,694 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 12:36:39] 2026-03-26 16:35:39,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 12:36:39] 2026-03-26 16:35:39,715 | INFO     | did not find any defunct processes belonging to 3469259
[2026-03-26 12:36:39] 2026-03-26 16:35:39,733 | INFO     | did not find any defunct processes belonging to 3469259
[2026-03-26 12:36:39] 2026-03-26 16:35:39,734 | INFO     | ready for new job
[2026-03-26 12:36:39] 2026-03-26 16:35:39,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 12:36:39] 2026-03-26 16:35:39,737 | INFO     | **************************************
[2026-03-26 12:36:39] 2026-03-26 16:35:39,737 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-26 12:36:39] 2026-03-26 16:35:39,737 | INFO     | **************************************
[2026-03-26 12:36:39] 2026-03-26 16:35:39,737 | INFO     | 
[2026-03-26 12:36:39] 2026-03-26 16:35:39,774 | INFO     | architecture information:
[2026-03-26 12:36:39] 2026-03-26 16:35:39,792 | INFO     | executing command: cat /etc/os-release
[2026-03-26 12:36:39] 2026-03-26 16:35:39,840 | INFO     | cat /etc/os-release:
[2026-03-26 12:36:39] NAME="CentOS Linux"
[2026-03-26 12:36:39] VERSION="7 (Core)"
[2026-03-26 12:36:39] ID="centos"
[2026-03-26 12:36:39] ID_LIKE="rhel fedora"
[2026-03-26 12:36:39] VERSION_ID="7"
[2026-03-26 12:36:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 12:36:39] ANSI_COLOR="0;31"
[2026-03-26 12:36:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 12:36:39] HOME_URL="https://www.centos.org/"
[2026-03-26 12:36:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 12:36:39] 
[2026-03-26 12:36:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 12:36:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 12:36:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 12:36:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 12:36:39] 
[2026-03-26 12:36:39] 2026-03-26 16:35:39,840 | INFO     | **************************************
[2026-03-26 12:36:39] 2026-03-26 16:35:40,344 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-26 12:36:39] 2026-03-26 16:35:40,409 | INFO     | sufficient remaining disk space (95199166464 B)
[2026-03-26 12:36:39] 2026-03-26 16:35:40,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 12:36:39] 2026-03-26 16:35:40,410 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 12:36:39] 2026-03-26 16:35:40,410 | INFO     | update_server=False
[2026-03-26 12:36:39] 2026-03-26 16:35:40,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 12:36:39] 2026-03-26 16:35:40,411 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-26 12:36:39] 2026-03-26 16:35:40,411 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 12:36:39] 2026-03-26 16:35:40,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 12:36:39] 2026-03-26 16:35:40,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 12:36:39] 2026-03-26 16:35:40,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 12:36:39] 2026-03-26 16:35:40,624 | INFO     | all job control threads have been joined
[2026-03-26 12:36:39] 2026-03-26 16:35:40,699 | INFO     | all payload control threads have been joined
[2026-03-26 12:36:39] 2026-03-26 16:35:40,763 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-26 12:36:39] 2026-03-26 16:35:40,763 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-26 12:36:39] 2026-03-26 16:35:40,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 12:36:39] 2026-03-26 16:35:40,763 | INFO     | will abort loop
[2026-03-26 12:36:39] 2026-03-26 16:35:40,852 | INFO     | job.realtimelogging is not enabled
[2026-03-26 12:36:39] 2026-03-26 16:35:41,035 | INFO     | all data control threads have been joined
[2026-03-26 12:36:39] 2026-03-26 16:35:41,417 | INFO     | [job] retrieve thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:41,515 | INFO     | [job] validate thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:41,630 | INFO     | [job] control thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:41,705 | INFO     | [payload] control thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:41,769 | INFO     | [job] job monitor thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:41,858 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:41,921 | INFO     | [payload] validate_post thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:41,942 | INFO     | [data] copytool_in thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:42,041 | INFO     | [data] control thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:42,100 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:42,247 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:42,419 | INFO     | [data] copytool_out thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:42,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 12:36:39] 2026-03-26 16:35:42,690 | INFO     | [payload] failed_post thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:42,835 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:43,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 12:36:39] 2026-03-26 16:35:43,674 | INFO     | [job] queue monitor thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:35:47,017 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 12:36:39] 2026-03-26 16:36:32,382 | INFO     | [monitor] cgroup control has ended
[2026-03-26 12:36:39] 2026-03-26 16:36:33,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913962358592)>', '<ExcThread(monitor, started 139913248892672)>']
[2026-03-26 12:36:39] 2026-03-26 16:36:34,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 12:36:39] 2026-03-26 16:36:34,773 | INFO     | [monitor] control thread has ended
[2026-03-26 12:36:39] 2026-03-26 16:36:38,960 | INFO     | all workflow threads have been joined
[2026-03-26 12:36:39] 2026-03-26 16:36:38,960 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 12:36:39] 2026-03-26 16:36:38,960 | INFO     | traces error code: 0
[2026-03-26 12:36:39] 2026-03-26 16:36:38,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 12:36:39] 2026-03-26 16:36:39,115 [wrapper] ==== pilot stdout END ====
[2026-03-26 12:36:39] 2026-03-26 16:36:39,159 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 12:36:39] 2026-03-26 16:36:39,251 [wrapper] pilotpid: 3462669
[2026-03-26 12:36:39] 2026-03-26 16:36:39,274 [wrapper] Pilot exit status: 0
[2026-03-26 12:36:39] 2026-03-26 16:36:39,322 [wrapper] pandaids: 7047737052 7047737052
[2026-03-26 12:36:39] 2026-03-26 16:36:39,434 [wrapper] cleanup supervisor_pilot  512577 3462670
[2026-03-26 12:36:39] 2026-03-26 16:36:39,437 [wrapper] Test setup, not cleaning
[2026-03-26 12:36:39] 2026-03-26 16:36:39,478 [wrapper] apfmon messages muted
[2026-03-26 12:36:39] 2026-03-26 16:36:39,492 [wrapper] ==== wrapper stdout END ====
[2026-03-26 12:36:39] 2026-03-26 16:36:39,522 [wrapper] ==== wrapper stderr END ====
[2026-03-26 12:36:39]  *** Error codes and diagnostics ***
[2026-03-26 12:36:39]     "exeErrorCode": 0,
[2026-03-26 12:36:39]     "exeErrorDiag": "",
[2026-03-26 12:36:39]     "pilotErrorCode": 0,
[2026-03-26 12:36:39]     "pilotErrorDiag": "",
[2026-03-26 12:36:39]  *** Listing of results directory ***
[2026-03-26 12:36:39] total 1006668
[2026-03-26 12:36:39] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 16:32 pilot3.tar.gz
[2026-03-26 12:36:39] -rwx------. 1 boincer umatlas     36322 Mar  9 16:43 runpilot2-wrapper.sh
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 16:44 queuedata.json
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas       100 Mar 25 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 12:36:39] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 25 23:20 run_atlas
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas       105 Mar 25 23:20 job.xml
[2026-03-26 12:36:39] -rw-r--r--. 3 boincer umatlas 364830491 Mar 25 23:20 EVNT.48998030._000051.pool.root.1
[2026-03-26 12:36:39] -rw-r--r--. 3 boincer umatlas 364830491 Mar 25 23:20 ATLAS.root_0
[2026-03-26 12:36:39] -rw-r--r--. 2 boincer umatlas     15845 Mar 25 23:20 start_atlas.sh
[2026-03-26 12:36:39] drwxrwx--x. 2 boincer umatlas      4096 Mar 25 23:20 shared
[2026-03-26 12:36:39] -rw-r--r--. 2 boincer umatlas    597943 Mar 25 23:20 input.tar.gz
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas         0 Mar 25 23:20 boinc_lockfile
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas      2560 Mar 26 07:46 pandaJob.out
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas        57 Mar 26 07:46 setup.sh.local
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas   1012192 Mar 26 07:46 agis_schedconf.cvmfs.json
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas       429 Mar 26 07:47 workernode_map.json
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas      6904 Mar 26 12:28 init_data.xml
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas 291804803 Mar 26 12:34 HITS.48998032._001270.pool.root.1
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas       532 Mar 26 12:34 boinc_task_state.xml
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas        96 Mar 26 12:35 pilot_heartbeat.json
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas      1033 Mar 26 12:35 memory_monitor_summary.json
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas   1511579 Mar 26 12:35 agis_ddmendpoints.agis.ALL.json
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas    539592 Mar 26 12:35 log.48998032._001270.job.log.tgz.1
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas      6330 Mar 26 12:35 heartbeat.json
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas      8192 Mar 26 12:36 boinc_mmap_file
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas        29 Mar 26 12:36 wrapper_checkpoint.txt
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas      4806 Mar 26 12:36 pilotlog.txt
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas   2163213 Mar 26 12:36 log.48998032._001270.job.log.1
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas       357 Mar 26 12:36 output.list
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas       620 Mar 26 12:36 runtime_log
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas   2723840 Mar 26 12:36 result.tar.gz
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas      9429 Mar 26 12:36 runtime_log.err
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas       782 Mar 26 12:36 qITLDm6cwJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjjdLDm9Ry0Xn.diag
[2026-03-26 12:36:39] -rw-r--r--. 1 boincer umatlas     23191 Mar 26 12:36 stderr.txt
[2026-03-26 12:36:39] HITS file was successfully produced:
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas 291804803 Mar 26 12:34 shared/HITS.pool.root.1
[2026-03-26 12:36:39]  *** Contents of shared directory: ***
[2026-03-26 12:36:39] total 644516
[2026-03-26 12:36:39] -rw-r--r--. 3 boincer umatlas 364830491 Mar 25 23:20 ATLAS.root_0
[2026-03-26 12:36:39] -rw-r--r--. 2 boincer umatlas     15845 Mar 25 23:20 start_atlas.sh
[2026-03-26 12:36:39] -rw-r--r--. 2 boincer umatlas    597943 Mar 25 23:20 input.tar.gz
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas 291804803 Mar 26 12:34 HITS.pool.root.1
[2026-03-26 12:36:39] -rw-------. 1 boincer umatlas   2723840 Mar 26 12:36 result.tar.gz
12:36:40 (3454207): run_atlas exited; CPU time 50808.294315
12:36:40 (3454207): called boinc_finish(0)

</stderr_txt>
]]>

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