Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:00:16 (8729): wrapper (7.7.26015): starting
03:00:16 (8729): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 03:00:16] Arguments: --nthreads 8
[2026-03-26 03:00:16] Threads: 8
[2026-03-26 03:00:16] Checking for CVMFS
[2026-03-26 03:00:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 03:00:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 03:00:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 03:00:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 03:00:16] 2.11.0.0 7780 160877 83592 157703 3 2 2830632 4096000 0 130560 2 14348068 99.623 10756475 402 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-26 03:00:16] CVMFS is ok
[2026-03-26 03:00:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 03:00:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 03:00:16] Further information can be found at the LHC@home message board.
[2026-03-26 03:00:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 03:00:16] Checking for apptainer binary...
[2026-03-26 03:00:16] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-26 03:00:16] apptainer is not installed, using version from CVMFS
[2026-03-26 03:00:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 03:00:17] WARNING: Environment variable TMPDIR already has value [/tmp/job_11397862/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node043
[2026-03-26 03:00:17] apptainer works
[2026-03-26 03:00:17] Set ATHENA_PROC_NUMBER=8
[2026-03-26 03:00:17] Set ATHENA_CORE_NUMBER=8
[2026-03-26 03:00:17] Starting ATLAS job with PandaID=7057369972
[2026-03-26 03:00:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11397862/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 04:20:40]  *** The last 200 lines of the pilot log: ***
[2026-03-26 04:20:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/5c/log.49176387._000134.job.log.tgz.1
[2026-03-26 04:20:40]  workdir=None
[2026-03-26 04:20:40] ]
[2026-03-26 04:20:40] 2026-03-26 03:19:46,341 | INFO     | time since job start (4760s) is within the limit (345600.0s)
[2026-03-26 04:20:40] 2026-03-26 03:19:46,353 | INFO     | transferring file log.49176387._000134.job.log.tgz.1 from /tmp/job_11397862/atlas/pilot/slots/0/PanDA_Pilot-7057369972/log.49176387._000134.job.log.tgz.1 to /tmp/j
[2026-03-26 04:20:40] 2026-03-26 03:19:46,353 | INFO     | executing command: /usr/bin/env mv /tmp/job_11397862/atlas/pilot/slots/0/PanDA_Pilot-7057369972/log.49176387._000134.job.log.tgz.1 /tmp/job_11397862/atlas/pilot/sl
[2026-03-26 04:20:40] 2026-03-26 03:19:46,360 | INFO     | adding to output.list: log.49176387._000134.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/5c/log.49176387._000134.job.log.tg
[2026-03-26 04:20:40] 2026-03-26 03:19:46,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-26 04:20:40] 2026-03-26 03:19:46,361 | INFO     | summary of transferred files:
[2026-03-26 04:20:40] 2026-03-26 03:19:46,361 | INFO     |  -- lfn=log.49176387._000134.job.log.tgz.1, status_code=0, status=transferred
[2026-03-26 04:20:40] 2026-03-26 03:19:46,361 | INFO     | stage-out finished correctly
[2026-03-26 04:20:40] 2026-03-26 03:19:47,212 | WARNING  | process 1480 can no longer be monitored (due to stat problems) - aborting
[2026-03-26 04:20:40] 2026-03-26 03:19:47,212 | INFO     | using path: /tmp/job_11397862/atlas/pilot/slots/0/PanDA_Pilot-7057369972/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 04:20:40] 2026-03-26 03:19:47,213 | INFO     | using path: /tmp/job_11397862/atlas/pilot/slots/0/PanDA_Pilot-7057369972/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 04:20:40] 2026-03-26 03:19:47,213 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-26 04:20:40] 2026-03-26 03:19:47,213 | WARNING  | maxPSS not found in memory monitor output
[2026-03-26 04:20:40] 2026-03-26 03:19:47,213 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3137403 B
[2026-03-26 04:20:40] 2026-03-26 03:19:47,213 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16090 B
[2026-03-26 04:20:40] 2026-03-26 03:19:47,213 | INFO     | executing command: df -mP /tmp/job_11397862/atlas/pilot/slots/0
[2026-03-26 04:20:40] 2026-03-26 03:19:47,220 | INFO     | sufficient remaining disk space (224869220352 B)
[2026-03-26 04:20:40] 2026-03-26 03:19:47,220 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-26 04:20:40] 2026-03-26 03:19:47,220 | INFO     | size of work directory /tmp/job_11397862/atlas/pilot/slots/0/PanDA_Pilot-7057369972: 3442511 B (within 5033164800 B limit)
[2026-03-26 04:20:40] 2026-03-26 03:19:47,220 | INFO     | pfn file=/tmp/job_11397862/atlas/pilot/slots/0/PanDA_Pilot-7057369972/HITS.49176387._000134.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-26 04:20:40] 2026-03-26 03:19:47,220 | INFO     | total size of present files: 0 B (workdir size: 3442511 B)
[2026-03-26 04:20:40] 2026-03-26 03:19:47,220 | INFO     | output file size check: skipping output file /tmp/job_11397862/atlas/pilot/slots/0/PanDA_Pilot-7057369972/HITS.49176387._000134.pool.root.1 since it does not exist
[2026-03-26 04:20:40] 2026-03-26 03:19:47,321 | INFO     | number of running child processes to parent process 1480: 1
[2026-03-26 04:20:40] 2026-03-26 03:19:47,321 | INFO     | maximum number of monitored processes: 6
[2026-03-26 04:20:40] 2026-03-26 03:19:48,358 | INFO     | time since job start (4762s) is within the limit (345600.0s)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,143 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-26 04:20:40] 2026-03-26 03:19:49,192 | INFO     | job 7057369972 has state=finished
[2026-03-26 04:20:40] 2026-03-26 03:19:49,192 | INFO     | preparing for final server update for job 7057369972 in state='finished'
[2026-03-26 04:20:40] 2026-03-26 03:19:49,766 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,766 | INFO     | reading metadata from: /tmp/job_11397862/atlas/pilot/slots/0/PanDA_Pilot-7057369972/jobReport.json
[2026-03-26 04:20:40] 2026-03-26 03:19:49,767 | INFO     | added worker_node to metadata from /tmp/job_11397862/atlas/pilot/slots/0/workernode_map.json
[2026-03-26 04:20:40] 2026-03-26 03:19:49,767 | INFO     | this job has now completed (state=finished)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,767 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,767 | INFO     | log transfer has been attempted: DONE
[2026-03-26 04:20:40] 2026-03-26 03:19:49,767 | INFO     | job 7057369972 has finished - writing final server update
[2026-03-26 04:20:40] 2026-03-26 03:19:49,768 | INFO     | total number of processed events: 400 (read)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,784 | INFO     | using path: /tmp/job_11397862/atlas/pilot/slots/0/PanDA_Pilot-7057369972/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,785 | INFO     | extracted standard info from prmon json
[2026-03-26 04:20:40] 2026-03-26 03:19:49,785 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 04:20:40] 2026-03-26 03:19:49,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 04:20:40] 2026-03-26 03:19:49,785 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 04:20:40] 2026-03-26 03:19:49,785 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 04:20:40] 2026-03-26 03:19:49,786 | INFO     | fitting pss+swap vs Time
[2026-03-26 04:20:40] 2026-03-26 03:19:49,786 | INFO     | sum of square deviations: 110960220.0
[2026-03-26 04:20:40] 2026-03-26 03:19:49,786 | INFO     | sum of deviations: -1293322487.9999998
[2026-03-26 04:20:40] 2026-03-26 03:19:49,786 | INFO     | mean x: 1774492885.0
[2026-03-26 04:20:40] 2026-03-26 03:19:49,786 | INFO     | mean y: 2555805.4788732394
[2026-03-26 04:20:40] 2026-03-26 03:19:49,786 | INFO     | intersect: 20685567726.025692
[2026-03-26 04:20:40] 2026-03-26 03:19:49,786 | INFO     | chi2: 0.008574028568175511
[2026-03-26 04:20:40] 2026-03-26 03:19:49,786 | INFO     | current memory leak: -11.66 B/s (using 71 data points, chi2=0.01)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,786 | INFO     | could have reported an average CPU frequency of 2443 MHz (6 samples)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | ..............................
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | . Timing measurements:
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | . get job = 0 s
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | . initial setup = 2 s
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | . payload setup = 4 s
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | . stage-in = 0 s
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | . payload execution = 4740 s
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | . stage-out = 0 s
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | . log creation = 0 s
[2026-03-26 04:20:40] 2026-03-26 03:19:49,787 | INFO     | ..............................
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | 
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | job summary report
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | --------------------------------------------------
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | PanDA job id: 7057369972
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | task id: 49176387
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | errors: (none)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | pilot state: finished 
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | transexitcode: 0
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | exeerrorcode: 0
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | exeerrordiag: 
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | exitcode: 0
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | exitmsg: OK
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | cpuconsumptiontime: 34806 s
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | nevents: 400
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | neventsw: 0
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | pid: 1480
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | pgrp: 1480
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | corecount: 8
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | event service: False
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | sizes: {0: 2280435, 11: 2280435, 4748: 2315830, 4751: 2315858, 4752: 2316052}
[2026-03-26 04:20:40] 2026-03-26 03:19:49,833 | INFO     | --------------------------------------------------
[2026-03-26 04:20:40] 2026-03-26 03:19:49,834 | INFO     | 
[2026-03-26 04:20:40] 2026-03-26 03:19:49,834 | INFO     | executing command: ls -lF /tmp/job_11397862/atlas/pilot/slots/0
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,843 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,844 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 04:20:40] 2026-03-26 03:19:49,844 | INFO     | job 7057369972 has completed (purged errors)
[2026-03-26 04:20:40] 2026-03-26 03:19:49,844 | INFO     | overall cleanup function is called
[2026-03-26 04:20:40] 2026-03-26 03:19:50,850 | INFO     | --- collectZombieJob: --- 10, [1480]
[2026-03-26 04:20:40] 2026-03-26 03:19:50,850 | INFO     | zombie collector waiting for pid 1480
[2026-03-26 04:20:40] 2026-03-26 03:19:50,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 04:20:40] 2026-03-26 03:19:50,850 | INFO     | collected zombie processes
[2026-03-26 04:20:40] 2026-03-26 03:19:50,850 | INFO     | will attempt to kill all subprocesses of pid=1480
[2026-03-26 04:20:40] 2026-03-26 03:19:50,949 | INFO     | process IDs to be killed: [1480] (in reverse order)
[2026-03-26 04:20:40] 2026-03-26 03:19:50,985 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 04:20:40] 2026-03-26 03:19:50,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 04:20:40] 2026-03-26 03:19:50,989 | INFO     | did not find any defunct processes belonging to 1480
[2026-03-26 04:20:40] 2026-03-26 03:19:50,993 | INFO     | did not find any defunct processes belonging to 1480
[2026-03-26 04:20:40] 2026-03-26 03:19:50,993 | INFO     | ready for new job
[2026-03-26 04:20:40] 2026-03-26 03:19:50,993 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 04:20:40] 2026-03-26 03:19:50,993 | INFO     | **************************************
[2026-03-26 04:20:40] 2026-03-26 03:19:50,993 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 04:20:40] 2026-03-26 03:19:50,994 | INFO     | **************************************
[2026-03-26 04:20:40] 2026-03-26 03:19:50,994 | INFO     | 
[2026-03-26 04:20:40] 2026-03-26 03:19:51,008 | INFO     | architecture information:
[2026-03-26 04:20:40] 2026-03-26 03:19:51,008 | INFO     | executing command: cat /etc/os-release
[2026-03-26 04:20:40] 2026-03-26 03:19:51,014 | INFO     | cat /etc/os-release:
[2026-03-26 04:20:40] NAME="CentOS Linux"
[2026-03-26 04:20:40] VERSION="7 (Core)"
[2026-03-26 04:20:40] ID="centos"
[2026-03-26 04:20:40] ID_LIKE="rhel fedora"
[2026-03-26 04:20:40] VERSION_ID="7"
[2026-03-26 04:20:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 04:20:40] ANSI_COLOR="0;31"
[2026-03-26 04:20:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 04:20:40] HOME_URL="https://www.centos.org/"
[2026-03-26 04:20:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 04:20:40] 
[2026-03-26 04:20:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 04:20:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 04:20:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 04:20:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 04:20:40] 
[2026-03-26 04:20:40] 2026-03-26 03:19:51,014 | INFO     | **************************************
[2026-03-26 04:20:40] 2026-03-26 03:19:51,517 | INFO     | executing command: df -mP /tmp/job_11397862/atlas/pilot/slots/0
[2026-03-26 04:20:40] 2026-03-26 03:19:51,523 | INFO     | sufficient remaining disk space (224872366080 B)
[2026-03-26 04:20:40] 2026-03-26 03:19:51,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 04:20:40] 2026-03-26 03:19:51,524 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 04:20:40] 2026-03-26 03:19:51,524 | INFO     | update_server=False
[2026-03-26 04:20:40] 2026-03-26 03:19:51,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 04:20:40] 2026-03-26 03:19:51,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 04:20:40] 2026-03-26 03:19:51,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 04:20:40] 2026-03-26 03:19:51,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 04:20:40] 2026-03-26 03:19:51,524 | INFO     | aborting loop
[2026-03-26 04:20:40] 2026-03-26 03:19:51,702 | INFO     | all payload control threads have been joined
[2026-03-26 04:20:40] 2026-03-26 03:19:51,732 | INFO     | all data control threads have been joined
[2026-03-26 04:20:40] 2026-03-26 03:19:51,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 04:20:40] 2026-03-26 03:19:52,529 | INFO     | [job] retrieve thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:52,529 | INFO     | [job] queue monitor thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:52,529 | INFO     | [job] job monitor thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:52,707 | INFO     | [payload] control thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:52,737 | INFO     | [data] control thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:52,946 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:52,967 | INFO     | all job control threads have been joined
[2026-03-26 04:20:40] 2026-03-26 03:19:53,397 | INFO     | [payload] validate_post thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:53,583 | INFO     | [job] validate thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:53,685 | INFO     | [data] copytool_in thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:53,688 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:53,692 | INFO     | [payload] failed_post thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:53,721 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:53,924 | INFO     | [data] copytool_out thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:53,972 | INFO     | [job] control thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:19:55,529 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:20:02,294 | INFO     | job.realtimelogging is not enabled
[2026-03-26 04:20:40] 2026-03-26 03:20:03,299 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 04:20:40] 2026-03-26 03:20:21,551 | INFO     | PID=16487 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-26 04:20:40] 2026-03-26 03:20:21,551 | INFO     | .. there are 3 such processes running
[2026-03-26 04:20:40] 2026-03-26 03:20:21,551 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 04:20:40] 2026-03-26 03:20:21,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 04:20:40] 2026-03-26 03:20:21,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 04:20:40] 2026-03-26 03:20:34,280 | INFO     | [monitor] cgroup control has ended
[2026-03-26 04:20:40] 2026-03-26 03:20:34,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-26 04:20:40] 2026-03-26 03:20:35,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 04:20:40] 2026-03-26 03:20:35,622 | INFO     | [monitor] control thread has ended
[2026-03-26 04:20:40] 2026-03-26 03:20:39,886 | INFO     | all workflow threads have been joined
[2026-03-26 04:20:40] 2026-03-26 03:20:39,886 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 04:20:40] 2026-03-26 03:20:39,886 | INFO     | traces error code: 0
[2026-03-26 04:20:40] 2026-03-26 03:20:39,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 04:20:40] 2026-03-26 03:20:39,941 [wrapper] ==== pilot stdout END ====
[2026-03-26 04:20:40] 2026-03-26 03:20:39,942 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 04:20:40] 2026-03-26 03:20:39,943 [wrapper] pilotpid: 16487
[2026-03-26 04:20:40] 2026-03-26 03:20:39,944 [wrapper] Pilot exit status: 0
[2026-03-26 04:20:40] 2026-03-26 03:20:39,949 [wrapper] pandaids: 7057369972
[2026-03-26 04:20:40] 2026-03-26 03:20:39,973 [wrapper] cleanup supervisor_pilot 12675 16488
[2026-03-26 04:20:40] 2026-03-26 03:20:39,974 [wrapper] Test setup, not cleaning
[2026-03-26 04:20:40] 2026-03-26 03:20:39,975 [wrapper] apfmon messages muted
[2026-03-26 04:20:40] 2026-03-26 03:20:39,976 [wrapper] ==== wrapper stdout END ====
[2026-03-26 04:20:40] 2026-03-26 03:20:39,977 [wrapper] ==== wrapper stderr END ====
[2026-03-26 04:20:40]  *** Error codes and diagnostics ***
[2026-03-26 04:20:40]     "exeErrorCode": 0,
[2026-03-26 04:20:40]     "exeErrorDiag": "",
[2026-03-26 04:20:40]     "pilotErrorCode": 0,
[2026-03-26 04:20:40]     "pilotErrorDiag": "",
[2026-03-26 04:20:40]  *** Listing of results directory ***
[2026-03-26 04:20:40] total 441100
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user    585013 Mar 17 19:29 pilot3.tar.gz
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user      5111 Mar 17 19:30 queuedata.json
[2026-03-26 04:20:40] -rwx------ 1 mf493845 unix-user     36322 Mar 17 19:30 runpilot2-wrapper.sh
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user       100 Mar 26 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 04:20:40] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 26 03:00 run_atlas
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user       105 Mar 26 03:00 job.xml
[2026-03-26 04:20:40] -rw-r--r-- 2 mf493845 unix-user 239959990 Mar 26 03:00 EVNT.49133777._000006.pool.root.1
[2026-03-26 04:20:40] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 26 03:00 start_atlas.sh
[2026-03-26 04:20:40] drwxrwx--x 2 mf493845 unix-user       100 Mar 26 03:00 shared
[2026-03-26 04:20:40] -rw-r--r-- 2 mf493845 unix-user    597539 Mar 26 03:00 input.tar.gz
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user      6389 Mar 26 03:00 init_data.xml
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user         0 Mar 26 03:00 boinc_setup_complete
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user      8192 Mar 26 03:00 boinc_mmap_file
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user         0 Mar 26 03:00 boinc_lockfile
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user      2620 Mar 26 03:00 pandaJob.out
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user   1012163 Mar 26 03:00 agis_schedconf.cvmfs.json
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user   1511579 Mar 26 03:00 agis_ddmendpoints.agis.ALL.json
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user       415 Mar 26 03:00 workernode_map.json
[2026-03-26 04:20:40] drwx------ 5 mf493845 unix-user       440 Mar 26 03:00 pilot3
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user 205732984 Mar 26 04:19 HITS.49176387._000134.pool.root.1
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user        95 Mar 26 04:19 pilot_heartbeat.json
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user      1029 Mar 26 04:19 memory_monitor_summary.json
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user    322082 Mar 26 04:19 log.49176387._000134.job.log.tgz.1
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user      6299 Mar 26 04:19 heartbeat.json
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user      4903 Mar 26 04:20 pilotlog.txt
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user    718638 Mar 26 04:20 log.49176387._000134.job.log.1
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user       357 Mar 26 04:20 output.list
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user       620 Mar 26 04:20 runtime_log
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user   1054720 Mar 26 04:20 result.tar.gz
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user      9219 Mar 26 04:20 runtime_log.err
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user       645 Mar 26 04:20 flbLDmxMoM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqjxLDm6KSnNm.diag
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user     23124 Mar 26 04:20 stderr.txt
[2026-03-26 04:20:40] HITS file was successfully produced:
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user 205732984 Mar 26 04:19 shared/HITS.pool.root.1
[2026-03-26 04:20:40]  *** Contents of shared directory: ***
[2026-03-26 04:20:40] total 436880
[2026-03-26 04:20:40] -rw-r--r-- 2 mf493845 unix-user 239959990 Mar 26 03:00 ATLAS.root_0
[2026-03-26 04:20:40] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 26 03:00 start_atlas.sh
[2026-03-26 04:20:40] -rw-r--r-- 2 mf493845 unix-user    597539 Mar 26 03:00 input.tar.gz
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user 205732984 Mar 26 04:19 HITS.pool.root.1
[2026-03-26 04:20:40] -rw------- 1 mf493845 unix-user   1054720 Mar 26 04:20 result.tar.gz
04:20:41 (8729): run_atlas exited; CPU time 34871.668711
04:20:41 (8729): called boinc_finish(0)

</stderr_txt>
]]>

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