Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:42:48 (3223059): wrapper (7.7.26015): starting
19:42:48 (3223059): wrapper: running run_atlas (--nthreads 12)
[2026-03-27 19:42:48] Arguments: --nthreads 12
[2026-03-27 19:42:48] Threads: 12
[2026-03-27 19:42:48] Checking for CVMFS
[2026-03-27 19:42:48] No cvmfs_config command found, will try listing directly
[2026-03-27 19:42:48] CVMFS is ok
[2026-03-27 19:42:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-27 19:42:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-27 19:42:48] Further information can be found at the LHC@home message board.
[2026-03-27 19:42:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-27 19:42:48] Checking for apptainer binary...
[2026-03-27 19:42:48] which: no apptainer in ((null))
[2026-03-27 19:42:48] apptainer is not installed, using version from CVMFS
[2026-03-27 19:42:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-27 19:42:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-27 19:42:48] apptainer works
[2026-03-27 19:42:48] Set ATHENA_PROC_NUMBER=12
[2026-03-27 19:42:48] Set ATHENA_CORE_NUMBER=12
[2026-03-27 19:42:48] Starting ATLAS job with PandaID=7057337487
[2026-03-27 19:42:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-27 20:25:07]  *** The last 200 lines of the pilot log: ***
[2026-03-27 20:25:07]  direct_access_wan=False
[2026-03-27 20:25:07]  domain=
[2026-03-27 20:25:07]  filesize=340789
[2026-03-27 20:25:07]  filetype=log
[2026-03-27 20:25:07]  guid=4e4106b4-61f0-4fe1-9303-63f54d0dee2b
[2026-03-27 20:25:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-27 20:25:07]  is_altstaged=None
[2026-03-27 20:25:07]  is_tar=False
[2026-03-27 20:25:07]  lfn=log.49176633._000076.job.log.tgz.1
[2026-03-27 20:25:07]  mtime=0
[2026-03-27 20:25:07]  protocol_id=None
[2026-03-27 20:25:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-27 20:25:07]  replicas=None
[2026-03-27 20:25:07]  scope=mc23_13p6TeV
[2026-03-27 20:25:07]  status=None
[2026-03-27 20:25:07]  status_code=0
[2026-03-27 20:25:07]  storage_token=
[2026-03-27 20:25:07]  surl=/var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7057337487/log.49176633._000076.job.log.tgz.1
[2026-03-27 20:25:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/ba/log.49176633._000076.job.log.tgz.1
[2026-03-27 20:25:07]  workdir=None
[2026-03-27 20:25:07] ]
[2026-03-27 20:25:07] 2026-03-27 19:24:13,565 | INFO     | transferring file log.49176633._000076.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7057337487/log.49176633._000076.job.log.tgz.1 to /var/lib/
[2026-03-27 20:25:07] 2026-03-27 19:24:13,565 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7057337487/log.49176633._000076.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/0/
[2026-03-27 20:25:07] 2026-03-27 19:24:13,578 | INFO     | adding to output.list: log.49176633._000076.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/ba/log.49176633._000076.job.log.tg
[2026-03-27 20:25:07] 2026-03-27 19:24:13,578 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-27 20:25:07] 2026-03-27 19:24:13,578 | INFO     | summary of transferred files:
[2026-03-27 20:25:07] 2026-03-27 19:24:13,578 | INFO     |  -- lfn=log.49176633._000076.job.log.tgz.1, status_code=0, status=transferred
[2026-03-27 20:25:07] 2026-03-27 19:24:13,578 | INFO     | stage-out finished correctly
[2026-03-27 20:25:07] 2026-03-27 19:24:13,600 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-27 20:25:07] 2026-03-27 19:24:13,625 | INFO     | job 7057337487 has state=finished
[2026-03-27 20:25:07] 2026-03-27 19:24:13,626 | INFO     | preparing for final server update for job 7057337487 in state='finished'
[2026-03-27 20:25:07] 2026-03-27 19:24:13,626 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7057337487/jobReport.json
[2026-03-27 20:25:07] 2026-03-27 19:24:13,628 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/0/workernode_map.json
[2026-03-27 20:25:07] 2026-03-27 19:24:13,628 | INFO     | this job has now completed (state=finished)
[2026-03-27 20:25:07] 2026-03-27 19:24:13,628 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-27 20:25:07] 2026-03-27 19:24:13,628 | INFO     | log transfer has been attempted: DONE
[2026-03-27 20:25:07] 2026-03-27 19:24:13,628 | INFO     | job 7057337487 has finished - writing final server update
[2026-03-27 20:25:07] 2026-03-27 19:24:13,628 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2913566/.job.ad'
[2026-03-27 20:25:07] 2026-03-27 19:24:13,628 | INFO     | total number of processed events: 400 (read)
[2026-03-27 20:25:07] 2026-03-27 19:24:13,638 | INFO     | using path: /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7057337487/memory_monitor_summary.json (trf name=prmon)
[2026-03-27 20:25:07] 2026-03-27 19:24:13,638 | INFO     | extracted standard info from prmon json
[2026-03-27 20:25:07] 2026-03-27 19:24:13,638 | INFO     | extracted standard memory fields from prmon json
[2026-03-27 20:25:07] 2026-03-27 19:24:13,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-27 20:25:07] 2026-03-27 19:24:13,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-27 20:25:07] 2026-03-27 19:24:13,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | fitting pss+swap vs Time
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | sum of square deviations: 12176972.5
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | sum of deviations: -64800117.0
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | mean x: 1774638311.5
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | mean y: 2729662.7647058824
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | intersect: 9446519588.206556
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | chi2: 0.0015758755635892554
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | current memory leak: -5.32 B/s (using 34 data points, chi2=0.00)
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | could have reported an average CPU frequency of 3626 MHz (5 samples)
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | ..............................
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | . Timing measurements:
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | . get job = 0 s
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | . initial setup = 4 s
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | . payload setup = 5 s
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | . stage-in = 0 s
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | . payload execution = 2454 s
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | . stage-out = 0 s
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | . log creation = 0 s
[2026-03-27 20:25:07] 2026-03-27 19:24:13,639 | INFO     | ..............................
[2026-03-27 20:25:07] 2026-03-27 19:24:14,115 | INFO     | 
[2026-03-27 20:25:07] 2026-03-27 19:24:14,115 | INFO     | job summary report
[2026-03-27 20:25:07] 2026-03-27 19:24:14,115 | INFO     | --------------------------------------------------
[2026-03-27 20:25:07] 2026-03-27 19:24:14,115 | INFO     | PanDA job id: 7057337487
[2026-03-27 20:25:07] 2026-03-27 19:24:14,115 | INFO     | task id: 49176633
[2026-03-27 20:25:07] 2026-03-27 19:24:14,115 | INFO     | errors: (none)
[2026-03-27 20:25:07] 2026-03-27 19:24:14,115 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | pilot state: finished 
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | transexitcode: 0
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | exeerrorcode: 0
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | exeerrordiag: 
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | exitcode: 0
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | exitmsg: OK
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | cpuconsumptiontime: 26461 s
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | nevents: 400
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | neventsw: 0
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | pid: 3233401
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | pgrp: 3233401
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | corecount: 12
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | event service: False
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | sizes: {0: 2280322, 11: 2280322, 2463: 2314750}
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | --------------------------------------------------
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | 
[2026-03-27 20:25:07] 2026-03-27 19:24:14,116 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/0
[2026-03-27 20:25:07] 2026-03-27 19:24:14,129 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | job 7057337487 has completed (purged errors)
[2026-03-27 20:25:07] 2026-03-27 19:24:14,130 | INFO     | overall cleanup function is called
[2026-03-27 20:25:07] 2026-03-27 19:24:15,137 | INFO     | --- collectZombieJob: --- 10, [3233401]
[2026-03-27 20:25:07] 2026-03-27 19:24:15,137 | INFO     | zombie collector waiting for pid 3233401
[2026-03-27 20:25:07] 2026-03-27 19:24:15,137 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-27 20:25:07] 2026-03-27 19:24:15,137 | INFO     | collected zombie processes
[2026-03-27 20:25:07] 2026-03-27 19:24:15,137 | INFO     | will attempt to kill all subprocesses of pid=3233401
[2026-03-27 20:25:07] 2026-03-27 19:24:15,281 | INFO     | process IDs to be killed: [3233401] (in reverse order)
[2026-03-27 20:25:07] 2026-03-27 19:24:15,349 | WARNING  | found no corresponding commands to process id(s)
[2026-03-27 20:25:07] 2026-03-27 19:24:15,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-27 20:25:07] 2026-03-27 19:24:15,361 | INFO     | did not find any defunct processes belonging to 3233401
[2026-03-27 20:25:07] 2026-03-27 19:24:15,368 | INFO     | did not find any defunct processes belonging to 3233401
[2026-03-27 20:25:07] 2026-03-27 19:24:15,368 | INFO     | ready for new job
[2026-03-27 20:25:07] 2026-03-27 19:24:15,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-27 20:25:07] 2026-03-27 19:24:15,369 | INFO     | **************************************
[2026-03-27 20:25:07] 2026-03-27 19:24:15,369 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-27 20:25:07] 2026-03-27 19:24:15,369 | INFO     | **************************************
[2026-03-27 20:25:07] 2026-03-27 19:24:15,369 | INFO     | 
[2026-03-27 20:25:07] 2026-03-27 19:24:15,372 | INFO     | architecture information:
[2026-03-27 20:25:07] 2026-03-27 19:24:15,372 | INFO     | executing command: cat /etc/os-release
[2026-03-27 20:25:07] 2026-03-27 19:24:15,380 | INFO     | cat /etc/os-release:
[2026-03-27 20:25:07] NAME="CentOS Linux"
[2026-03-27 20:25:07] VERSION="7 (Core)"
[2026-03-27 20:25:07] ID="centos"
[2026-03-27 20:25:07] ID_LIKE="rhel fedora"
[2026-03-27 20:25:07] VERSION_ID="7"
[2026-03-27 20:25:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-27 20:25:07] ANSI_COLOR="0;31"
[2026-03-27 20:25:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-27 20:25:07] HOME_URL="https://www.centos.org/"
[2026-03-27 20:25:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-27 20:25:07] 
[2026-03-27 20:25:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-27 20:25:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-27 20:25:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-27 20:25:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-27 20:25:07] 
[2026-03-27 20:25:07] 2026-03-27 19:24:15,381 | INFO     | **************************************
[2026-03-27 20:25:07] 2026-03-27 19:24:15,884 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/0
[2026-03-27 20:25:07] 2026-03-27 19:24:15,895 | INFO     | sufficient remaining disk space (223037358080 B)
[2026-03-27 20:25:07] 2026-03-27 19:24:15,896 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-27 20:25:07] 2026-03-27 19:24:15,896 | INFO     | current server update state: UPDATING_FINAL
[2026-03-27 20:25:07] 2026-03-27 19:24:15,896 | INFO     | update_server=False
[2026-03-27 20:25:07] 2026-03-27 19:24:15,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-27 20:25:07] 2026-03-27 19:24:15,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-27 20:25:07] 2026-03-27 19:24:16,195 | INFO     | all data control threads have been joined
[2026-03-27 20:25:07] 2026-03-27 19:24:16,211 | INFO     | all payload control threads have been joined
[2026-03-27 20:25:07] 2026-03-27 19:24:16,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-27 20:25:07] 2026-03-27 19:24:16,647 | INFO     | job.realtimelogging is not enabled
[2026-03-27 20:25:07] 2026-03-27 19:24:16,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-27 20:25:07] 2026-03-27 19:24:16,715 | INFO     | aborting loop
[2026-03-27 20:25:07] 2026-03-27 19:24:16,901 | INFO     | [job] retrieve thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:16,918 | INFO     | [data] copytool_in thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:17,200 | INFO     | [data] control thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:17,217 | INFO     | [payload] control thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:17,273 | INFO     | [payload] execute_payloads thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:17,368 | INFO     | all job control threads have been joined
[2026-03-27 20:25:07] 2026-03-27 19:24:17,498 | INFO     | [payload] validate_post thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:17,652 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:17,720 | INFO     | [job] job monitor thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:18,103 | INFO     | [job] validate thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:18,165 | INFO     | [payload] failed_post thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:18,282 | INFO     | [payload] validate_pre thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:18,282 | INFO     | [job] create_data_payload thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:18,374 | INFO     | [job] control thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:18,611 | INFO     | [data] copytool_out thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:18,678 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-27 20:25:07] 2026-03-27 19:24:19,683 | INFO     | [job] queue monitor thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:19,904 | INFO     | [data] queue_monitor thread has finished
[2026-03-27 20:25:07] 2026-03-27 19:24:46,445 | INFO     | PID=3227616 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-27 20:25:07] 2026-03-27 19:24:46,445 | INFO     | .. there are 5 such processes running
[2026-03-27 20:25:07] 2026-03-27 19:24:46,445 | INFO     | found 0 job(s) in 20 queues
[2026-03-27 20:25:07] 2026-03-27 19:24:46,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-27 20:25:07] 2026-03-27 19:24:46,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-27 20:25:07] 2026-03-27 19:25:02,050 | INFO     | [monitor] cgroup control has ended
[2026-03-27 20:25:07] 2026-03-27 19:25:02,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22949269288768)>', '<ExcThread(monitor, started 22949026600704)>']
[2026-03-27 20:25:07] 2026-03-27 19:25:02,526 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-27 20:25:07] 2026-03-27 19:25:02,527 | INFO     | [monitor] control thread has ended
[2026-03-27 20:25:07] 2026-03-27 19:25:07,300 | INFO     | all workflow threads have been joined
[2026-03-27 20:25:07] 2026-03-27 19:25:07,300 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-27 20:25:07] 2026-03-27 19:25:07,300 | INFO     | traces error code: 0
[2026-03-27 20:25:07] 2026-03-27 19:25:07,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-27 20:25:07] 2026-03-27 19:25:07,373 [wrapper] ==== pilot stdout END ====
[2026-03-27 20:25:07] 2026-03-27 19:25:07,375 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-27 20:25:07] 2026-03-27 19:25:07,377 [wrapper] pilotpid: 3227616
[2026-03-27 20:25:07] 2026-03-27 19:25:07,378 [wrapper] Pilot exit status: 0
[2026-03-27 20:25:07] 2026-03-27 19:25:07,384 [wrapper] pandaids: 7057337487
[2026-03-27 20:25:07] 2026-03-27 19:25:07,430 [wrapper] cleanup supervisor_pilot 3310204 3227617
[2026-03-27 20:25:07] 2026-03-27 19:25:07,433 [wrapper] Test setup, not cleaning
[2026-03-27 20:25:07] 2026-03-27 19:25:07,435 [wrapper] apfmon messages muted
[2026-03-27 20:25:07] 2026-03-27 19:25:07,437 [wrapper] ==== wrapper stdout END ====
[2026-03-27 20:25:07] 2026-03-27 19:25:07,439 [wrapper] ==== wrapper stderr END ====
[2026-03-27 20:25:07]  *** Error codes and diagnostics ***
[2026-03-27 20:25:07]     "exeErrorCode": 0,
[2026-03-27 20:25:07]     "exeErrorDiag": "",
[2026-03-27 20:25:07]     "pilotErrorCode": 0,
[2026-03-27 20:25:07]     "pilotErrorDiag": "",
[2026-03-27 20:25:07]  *** Listing of results directory ***
[2026-03-27 20:25:07] total 455152
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc      5111 Mar 17 16:25 queuedata.json
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc    585013 Mar 17 16:25 pilot3.tar.gz
[2026-03-27 20:25:07] -rwx------. 1 boinc boinc     36322 Mar 17 16:26 runpilot2-wrapper.sh
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc       100 Mar 27 19:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-27 20:25:07] -rwxr-xr-x. 1 boinc boinc      7986 Mar 27 19:42 run_atlas
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc       105 Mar 27 19:42 job.xml
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc      6712 Mar 27 19:42 init_data.xml
[2026-03-27 20:25:07] -rw-r--r--. 2 boinc boinc 234513640 Mar 27 19:42 EVNT.49134636._000004.pool.root.1
[2026-03-27 20:25:07] -rw-r--r--. 2 boinc boinc     15845 Mar 27 19:42 start_atlas.sh
[2026-03-27 20:25:07] drwxrwx--x. 2 boinc boinc      4096 Mar 27 19:42 shared
[2026-03-27 20:25:07] -rw-r--r--. 2 boinc boinc    597542 Mar 27 19:42 input.tar.gz
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc         0 Mar 27 19:42 boinc_lockfile
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc      2622 Mar 27 19:42 pandaJob.out
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc   1005169 Mar 27 19:42 agis_schedconf.cvmfs.json
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc   1511579 Mar 27 19:42 agis_ddmendpoints.agis.ALL.json
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc       445 Mar 27 19:42 workernode_map.json
[2026-03-27 20:25:07] drwx------. 5 boinc boinc      4096 Mar 27 19:42 pilot3
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc 226148187 Mar 27 20:23 HITS.49176633._000076.pool.root.1
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc       529 Mar 27 20:24 boinc_task_state.xml
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc      1029 Mar 27 20:24 memory_monitor_summary.json
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc    340789 Mar 27 20:24 log.49176633._000076.job.log.tgz.1
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc      6342 Mar 27 20:24 heartbeat.json
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc        95 Mar 27 20:24 pilot_heartbeat.json
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc      8192 Mar 27 20:25 boinc_mmap_file
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc        27 Mar 27 20:25 wrapper_checkpoint.txt
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc      4902 Mar 27 20:25 pilotlog.txt
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc    397209 Mar 27 20:25 log.49176633._000076.job.log.1
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc       357 Mar 27 20:25 output.list
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc       620 Mar 27 20:25 runtime_log
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc    757760 Mar 27 20:25 result.tar.gz
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc      9223 Mar 27 20:25 runtime_log.err
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc       659 Mar 27 20:25 FRNODmrUlM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2T0LDmYb7JAn.diag
[2026-03-27 20:25:07] -rw-r--r--. 1 boinc boinc     20849 Mar 27 20:25 stderr.txt
[2026-03-27 20:25:07] HITS file was successfully produced:
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc 226148187 Mar 27 20:23 shared/HITS.pool.root.1
[2026-03-27 20:25:07]  *** Contents of shared directory: ***
[2026-03-27 20:25:07] total 451216
[2026-03-27 20:25:07] -rw-r--r--. 2 boinc boinc 234513640 Mar 27 19:42 ATLAS.root_0
[2026-03-27 20:25:07] -rw-r--r--. 2 boinc boinc     15845 Mar 27 19:42 start_atlas.sh
[2026-03-27 20:25:07] -rw-r--r--. 2 boinc boinc    597542 Mar 27 19:42 input.tar.gz
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc 226148187 Mar 27 20:23 HITS.pool.root.1
[2026-03-27 20:25:07] -rw-------. 1 boinc boinc    757760 Mar 27 20:25 result.tar.gz
20:25:08 (3223059): run_atlas exited; CPU time 26506.452488
20:25:08 (3223059): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN