Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:55:23 (22555): wrapper (7.7.26015): starting
17:55:23 (22555): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 17:55:23] Arguments: --nthreads 8
[2026-03-25 17:55:23] Threads: 8
[2026-03-25 17:55:23] Checking for CVMFS
[2026-03-25 17:55:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 17:55:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 17:55:23] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 17:55:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 17:55:23] 2.11.2.0 2837 17793 70788 157696 0 50 11509197 20275200 1 130560 0 2993252 99.592 1303857 25574 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-25 17:55:23] CVMFS is ok
[2026-03-25 17:55:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 17:55:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 17:55:23] Further information can be found at the LHC@home message board.
[2026-03-25 17:55:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 17:55:23] Checking for apptainer binary...
[2026-03-25 17:55:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 17:55:23] Running /usr/bin/apptainer --version
[2026-03-25 17:55:23] apptainer version 1.3.2-1.el7
[2026-03-25 17:55:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 17:55:25] c-204-21.aglt2.org
[2026-03-25 17:55:25] apptainer works
[2026-03-25 17:55:25] Set ATHENA_PROC_NUMBER=8
[2026-03-25 17:55:25] Set ATHENA_CORE_NUMBER=8
[2026-03-25 17:55:25] Starting ATLAS job with PandaID=7057313605
[2026-03-25 17:55:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 22:25:24]  *** The last 200 lines of the pilot log: ***
[2026-03-25 22:25:24] 2026-03-26 02:24:51,436 | INFO     | 16149s have passed since pilot start - server update state is 'RUNNING'
[2026-03-25 22:25:24] 2026-03-26 02:24:52,002 | INFO     | monitor loop #1202: job 0:7057313605 is in state 'finished'
[2026-03-25 22:25:24] 2026-03-26 02:24:52,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,052 | INFO     | job 7057313605 has state=finished
[2026-03-25 22:25:24] 2026-03-26 02:24:52,052 | INFO     | preparing for final server update for job 7057313605 in state='finished'
[2026-03-25 22:25:24] 2026-03-26 02:24:52,052 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7057313605/jobReport.json
[2026-03-25 22:25:24] 2026-03-26 02:24:52,056 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-25 22:25:24] 2026-03-26 02:24:52,056 | INFO     | this job has now completed (state=finished)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,056 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,057 | INFO     | log transfer has been attempted: DONE
[2026-03-25 22:25:24] 2026-03-26 02:24:52,057 | INFO     | job 7057313605 has finished - writing final server update
[2026-03-25 22:25:24] 2026-03-26 02:24:52,057 | INFO     | total number of processed events: 400 (read)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,060 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7057313605/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,060 | INFO     | extracted standard info from prmon json
[2026-03-25 22:25:24] 2026-03-26 02:24:52,061 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 22:25:24] 2026-03-26 02:24:52,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 22:25:24] 2026-03-26 02:24:52,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 22:25:24] 2026-03-26 02:24:52,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 22:25:24] 2026-03-26 02:24:52,066 | INFO     | fitting pss+swap vs Time
[2026-03-25 22:25:24] 2026-03-26 02:24:52,066 | INFO     | sum of square deviations: 5705306229.757604
[2026-03-25 22:25:24] 2026-03-26 02:24:52,068 | INFO     | sum of deviations: 30845402661.25759
[2026-03-25 22:25:24] 2026-03-26 02:24:52,068 | INFO     | mean x: 1774483805.530303
[2026-03-25 22:25:24] 2026-03-26 02:24:52,068 | INFO     | mean y: 2507304.1553030303
[2026-03-25 22:25:24] 2026-03-26 02:24:52,069 | INFO     | intersect: -9591135051.443262
[2026-03-25 22:25:24] 2026-03-26 02:24:52,069 | INFO     | chi2: 1.5557220555422373
[2026-03-25 22:25:24] 2026-03-26 02:24:52,069 | INFO     | sum of square deviations: 5387237589.752904
[2026-03-25 22:25:24] 2026-03-26 02:24:52,071 | INFO     | sum of deviations: 30099519879.077225
[2026-03-25 22:25:24] 2026-03-26 02:24:52,071 | INFO     | mean x: 1774483653.030888
[2026-03-25 22:25:24] 2026-03-26 02:24:52,071 | INFO     | mean y: 2506946.49034749
[2026-03-25 22:25:24] 2026-03-26 02:24:52,072 | INFO     | intersect: -9911870338.650068
[2026-03-25 22:25:24] 2026-03-26 02:24:52,072 | INFO     | chi2: 1.5563791805949123
[2026-03-25 22:25:24] 2026-03-26 02:24:52,072 | INFO     | current chi2=1.5563791805949123 (change=-0.042239232280214395 %)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,072 | INFO     | right removable region: 258
[2026-03-25 22:25:24] 2026-03-26 02:24:52,073 | INFO     | sum of square deviations: 5387232709.752904
[2026-03-25 22:25:24] 2026-03-26 02:24:52,074 | INFO     | sum of deviations: -8800426869.77221
[2026-03-25 22:25:24] 2026-03-26 02:24:52,074 | INFO     | mean x: 1774483958.030888
[2026-03-25 22:25:24] 2026-03-26 02:24:52,075 | INFO     | mean y: 2526139.0965250963
[2026-03-25 22:25:24] 2026-03-26 02:24:52,075 | INFO     | intersect: 2901271588.8640065
[2026-03-25 22:25:24] 2026-03-26 02:24:52,075 | INFO     | chi2: 0.11239071297201586
[2026-03-25 22:25:24] 2026-03-26 02:24:52,075 | INFO     | current chi2=0.11239071297201586 (change=92.77565600027167 %)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,076 | INFO     | sum of square deviations: 5081205927.247999
[2026-03-25 22:25:24] 2026-03-26 02:24:52,077 | INFO     | sum of deviations: -6263485739.8307085
[2026-03-25 22:25:24] 2026-03-26 02:24:52,077 | INFO     | mean x: 1774484110.531496
[2026-03-25 22:25:24] 2026-03-26 02:24:52,078 | INFO     | mean y: 2524847.7913385825
[2026-03-25 22:25:24] 2026-03-26 02:24:52,078 | INFO     | intersect: 2189890619.028608
[2026-03-25 22:25:24] 2026-03-26 02:24:52,078 | INFO     | chi2: 0.0946890097913478
[2026-03-25 22:25:24] 2026-03-26 02:24:52,078 | INFO     | current chi2=0.0946890097913478 (change=15.75014759900634 %)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,078 | INFO     | left removable region: 20
[2026-03-25 22:25:24] 2026-03-26 02:24:52,079 | INFO     | sum of square deviations: 4180171267.231093
[2026-03-25 22:25:24] 2026-03-26 02:24:52,080 | INFO     | sum of deviations: 11434672996.852938
[2026-03-25 22:25:24] 2026-03-26 02:24:52,080 | INFO     | mean x: 1774484232.5336134
[2026-03-25 22:25:24] 2026-03-26 02:24:52,081 | INFO     | mean y: 2514952.205882353
[2026-03-25 22:25:24] 2026-03-26 02:24:52,081 | INFO     | intersect: -4851507919.094737
[2026-03-25 22:25:24] 2026-03-26 02:24:52,081 | INFO     | chi2: 0.0010562849436939862
[2026-03-25 22:25:24] 2026-03-26 02:24:52,081 | INFO     | current memory leak: 2.74 B/s (using 238 data points, chi2=0.00)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,082 | INFO     | could have reported an average CPU frequency of 1679 MHz (12 samples)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,082 | INFO     | ..............................
[2026-03-25 22:25:24] 2026-03-26 02:24:52,082 | INFO     | . Timing measurements:
[2026-03-25 22:25:24] 2026-03-26 02:24:52,082 | INFO     | . get job = 0 s
[2026-03-25 22:25:24] 2026-03-26 02:24:52,082 | INFO     | . initial setup = 8 s
[2026-03-25 22:25:24] 2026-03-26 02:24:52,082 | INFO     | . payload setup = 16 s
[2026-03-25 22:25:24] 2026-03-26 02:24:52,082 | INFO     | . stage-in = 0 s
[2026-03-25 22:25:24] 2026-03-26 02:24:52,082 | INFO     | . payload execution = 16100 s
[2026-03-25 22:25:24] 2026-03-26 02:24:52,083 | INFO     | . stage-out = 2 s
[2026-03-25 22:25:24] 2026-03-26 02:24:52,083 | INFO     | . log creation = 0 s
[2026-03-25 22:25:24] 2026-03-26 02:24:52,083 | INFO     | ..............................
[2026-03-25 22:25:24] 2026-03-26 02:24:52,164 | INFO     | 
[2026-03-25 22:25:24] 2026-03-26 02:24:52,165 | INFO     | job summary report
[2026-03-25 22:25:24] 2026-03-26 02:24:52,165 | INFO     | --------------------------------------------------
[2026-03-25 22:25:24] 2026-03-26 02:24:52,165 | INFO     | PanDA job id: 7057313605
[2026-03-25 22:25:24] 2026-03-26 02:24:52,165 | INFO     | task id: 49176589
[2026-03-25 22:25:24] 2026-03-26 02:24:52,166 | INFO     | errors: (none)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,166 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 22:25:24] 2026-03-26 02:24:52,166 | INFO     | pilot state: finished 
[2026-03-25 22:25:24] 2026-03-26 02:24:52,166 | INFO     | transexitcode: 0
[2026-03-25 22:25:24] 2026-03-26 02:24:52,166 | INFO     | exeerrorcode: 0
[2026-03-25 22:25:24] 2026-03-26 02:24:52,167 | INFO     | exeerrordiag: 
[2026-03-25 22:25:24] 2026-03-26 02:24:52,167 | INFO     | exitcode: 0
[2026-03-25 22:25:24] 2026-03-26 02:24:52,167 | INFO     | exitmsg: OK
[2026-03-25 22:25:24] 2026-03-26 02:24:52,167 | INFO     | cpuconsumptiontime: 115254 s
[2026-03-25 22:25:24] 2026-03-26 02:24:52,167 | INFO     | nevents: 400
[2026-03-25 22:25:24] 2026-03-26 02:24:52,167 | INFO     | neventsw: 0
[2026-03-25 22:25:24] 2026-03-26 02:24:52,168 | INFO     | pid: 30747
[2026-03-25 22:25:24] 2026-03-26 02:24:52,168 | INFO     | pgrp: 30747
[2026-03-25 22:25:24] 2026-03-26 02:24:52,168 | INFO     | corecount: 8
[2026-03-25 22:25:24] 2026-03-26 02:24:52,168 | INFO     | event service: False
[2026-03-25 22:25:24] 2026-03-26 02:24:52,168 | INFO     | sizes: {0: 2280082, 1: 2280288, 11: 2280316, 16121: 2311836, 16125: 2320834, 16128: 2320890, 16130: 2321212}
[2026-03-25 22:25:24] 2026-03-26 02:24:52,169 | INFO     | --------------------------------------------------
[2026-03-25 22:25:24] 2026-03-26 02:24:52,169 | INFO     | 
[2026-03-25 22:25:24] 2026-03-26 02:24:52,169 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-25 22:25:24] 2026-03-26 02:24:52,198 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,199 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,199 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,199 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,200 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,200 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,202 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,202 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 22:25:24] 2026-03-26 02:24:52,202 | INFO     | job 7057313605 has completed (purged errors)
[2026-03-25 22:25:24] 2026-03-26 02:24:52,203 | INFO     | overall cleanup function is called
[2026-03-25 22:25:24] 2026-03-26 02:24:53,211 | INFO     | --- collectZombieJob: --- 10, [30747]
[2026-03-25 22:25:24] 2026-03-26 02:24:53,211 | INFO     | zombie collector waiting for pid 30747
[2026-03-25 22:25:24] 2026-03-26 02:24:53,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 22:25:24] 2026-03-26 02:24:53,211 | INFO     | collected zombie processes
[2026-03-25 22:25:24] 2026-03-26 02:24:53,212 | INFO     | will attempt to kill all subprocesses of pid=30747
[2026-03-25 22:25:24] 2026-03-26 02:24:53,299 | INFO     | process IDs to be killed: [30747] (in reverse order)
[2026-03-25 22:25:24] 2026-03-26 02:24:53,358 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 22:25:24] 2026-03-26 02:24:53,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 22:25:24] 2026-03-26 02:24:53,362 | INFO     | did not find any defunct processes belonging to 30747
[2026-03-25 22:25:24] 2026-03-26 02:24:53,365 | INFO     | did not find any defunct processes belonging to 30747
[2026-03-25 22:25:24] 2026-03-26 02:24:53,365 | INFO     | ready for new job
[2026-03-25 22:25:24] 2026-03-26 02:24:53,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 22:25:24] 2026-03-26 02:24:53,367 | INFO     | **************************************
[2026-03-25 22:25:24] 2026-03-26 02:24:53,367 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 22:25:24] 2026-03-26 02:24:53,367 | INFO     | **************************************
[2026-03-25 22:25:24] 2026-03-26 02:24:53,368 | INFO     | 
[2026-03-25 22:25:24] 2026-03-26 02:24:53,368 | INFO     | architecture information:
[2026-03-25 22:25:24] 2026-03-26 02:24:53,369 | INFO     | executing command: cat /etc/os-release
[2026-03-25 22:25:24] 2026-03-26 02:24:53,386 | INFO     | cat /etc/os-release:
[2026-03-25 22:25:24] NAME="CentOS Linux"
[2026-03-25 22:25:24] VERSION="7 (Core)"
[2026-03-25 22:25:24] ID="centos"
[2026-03-25 22:25:24] ID_LIKE="rhel fedora"
[2026-03-25 22:25:24] VERSION_ID="7"
[2026-03-25 22:25:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 22:25:24] ANSI_COLOR="0;31"
[2026-03-25 22:25:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 22:25:24] HOME_URL="https://www.centos.org/"
[2026-03-25 22:25:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 22:25:24] 
[2026-03-25 22:25:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 22:25:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 22:25:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 22:25:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 22:25:24] 
[2026-03-25 22:25:24] 2026-03-26 02:24:53,387 | INFO     | **************************************
[2026-03-25 22:25:24] 2026-03-26 02:24:53,890 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-25 22:25:24] 2026-03-26 02:24:53,910 | INFO     | sufficient remaining disk space (17334009856 B)
[2026-03-25 22:25:24] 2026-03-26 02:24:53,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 22:25:24] 2026-03-26 02:24:53,911 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 22:25:24] 2026-03-26 02:24:53,911 | INFO     | update_server=False
[2026-03-25 22:25:24] 2026-03-26 02:24:53,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 22:25:24] 2026-03-26 02:24:53,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 22:25:24] 2026-03-26 02:24:53,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 22:25:24] 2026-03-26 02:24:53,912 | INFO     | aborting loop
[2026-03-25 22:25:24] 2026-03-26 02:24:53,971 | INFO     | all data control threads have been joined
[2026-03-25 22:25:24] 2026-03-26 02:24:54,324 | INFO     | all job control threads have been joined
[2026-03-25 22:25:24] 2026-03-26 02:24:54,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 22:25:24] 2026-03-26 02:24:54,812 | INFO     | all payload control threads have been joined
[2026-03-25 22:25:24] 2026-03-26 02:24:54,917 | INFO     | [job] retrieve thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:54,917 | INFO     | [job] queue monitor thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:54,918 | INFO     | [job] job monitor thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:54,976 | INFO     | [data] control thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:55,268 | INFO     | [payload] validate_post thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:55,329 | INFO     | [job] control thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:55,440 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:55,817 | INFO     | [payload] control thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:56,176 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:56,177 | INFO     | [job] validate thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:56,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 22:25:24] 2026-03-26 02:24:56,234 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:56,290 | INFO     | [payload] failed_post thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:56,300 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:56,302 | INFO     | [data] copytool_in thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:24:56,817 | INFO     | [data] copytool_out thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:25:00,227 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 22:25:24] 2026-03-26 02:25:16,697 | INFO     | [monitor] cgroup control has ended
[2026-03-25 22:25:24] 2026-03-26 02:25:16,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413057238848)>', '<ExcThread(monitor, started 140411800643328)>']
[2026-03-25 22:25:24] 2026-03-26 02:25:21,804 | INFO     | all workflow threads have been joined
[2026-03-25 22:25:24] 2026-03-26 02:25:21,804 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 22:25:24] 2026-03-26 02:25:21,804 | INFO     | traces error code: 0
[2026-03-25 22:25:24] 2026-03-26 02:25:21,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 22:25:24] 2026-03-26 02:25:24,556 | INFO     | PID=26237 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 22:25:24] 2026-03-26 02:25:24,556 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 22:25:24] 2026-03-26 02:25:24,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 22:25:24] 2026-03-26 02:25:24,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 22:25:24] 2026-03-26 02:25:24,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 22:25:24] 2026-03-26 02:25:24,557 | INFO     | [monitor] control thread has ended
[2026-03-25 22:25:24] 2026-03-26 02:25:24,655 [wrapper] ==== pilot stdout END ====
[2026-03-25 22:25:24] 2026-03-26 02:25:24,660 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 22:25:24] 2026-03-26 02:25:24,664 [wrapper] pilotpid: 26237
[2026-03-25 22:25:24] 2026-03-26 02:25:24,669 [wrapper] Pilot exit status: 0
[2026-03-25 22:25:24] 2026-03-26 02:25:24,685 [wrapper] pandaids: 7057313605
[2026-03-25 22:25:24] 2026-03-26 02:25:24,729 [wrapper] cleanup supervisor_pilot 14090 26238
[2026-03-25 22:25:24] 2026-03-26 02:25:24,734 [wrapper] Test setup, not cleaning
[2026-03-25 22:25:24] 2026-03-26 02:25:24,739 [wrapper] apfmon messages muted
[2026-03-25 22:25:24] 2026-03-26 02:25:24,743 [wrapper] ==== wrapper stdout END ====
[2026-03-25 22:25:24] 2026-03-26 02:25:24,748 [wrapper] ==== wrapper stderr END ====
[2026-03-25 22:25:24]  *** Error codes and diagnostics ***
[2026-03-25 22:25:24]     "exeErrorCode": 0,
[2026-03-25 22:25:24]     "exeErrorDiag": "",
[2026-03-25 22:25:24]     "pilotErrorCode": 0,
[2026-03-25 22:25:24]     "pilotErrorDiag": "",
[2026-03-25 22:25:24]  *** Listing of results directory ***
[2026-03-25 22:25:24] total 466500
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas      5111 Mar 17 11:25 queuedata.json
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas    585013 Mar 17 11:25 pilot3.tar.gz
[2026-03-25 22:25:24] -rwx------ 1 boincer umatlas     36322 Mar 17 11:26 runpilot2-wrapper.sh
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas       100 Mar 25 17:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 22:25:24] -rwxr-xr-x 1 boincer umatlas      7986 Mar 25 17:55 run_atlas
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas       105 Mar 25 17:55 job.xml
[2026-03-25 22:25:24] -rw-r--r-- 2 boincer umatlas 243393896 Mar 25 17:55 EVNT.49134465._000006.pool.root.1
[2026-03-25 22:25:24] -rw-r--r-- 2 boincer umatlas    597529 Mar 25 17:55 input.tar.gz
[2026-03-25 22:25:24] -rw-r--r-- 2 boincer umatlas     15845 Mar 25 17:55 start_atlas.sh
[2026-03-25 22:25:24] drwxrwx--x 2 boincer umatlas      4096 Mar 25 17:55 shared
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas         0 Mar 25 17:55 boinc_lockfile
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas      2601 Mar 25 17:55 pandaJob.out
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas        57 Mar 25 17:55 setup.sh.local
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas   1012179 Mar 25 17:55 agis_schedconf.cvmfs.json
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas       432 Mar 25 17:55 workernode_map.json
[2026-03-25 22:25:24] drwx------ 5 boincer umatlas      4096 Mar 25 17:55 pilot3
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas      5911 Mar 25 22:18 init_data.xml
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas 224950607 Mar 25 22:24 HITS.49176589._000135.pool.root.1
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas       531 Mar 25 22:24 boinc_task_state.xml
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas      1056 Mar 25 22:24 memory_monitor_summary.json
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas        95 Mar 25 22:24 pilot_heartbeat.json
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas   1511579 Mar 25 22:24 agis_ddmendpoints.agis.ALL.json
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas    486006 Mar 25 22:24 log.49176589._000135.job.log.tgz.1
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas      6404 Mar 25 22:24 heartbeat.json
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas        29 Mar 25 22:25 wrapper_checkpoint.txt
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas      8192 Mar 25 22:25 boinc_mmap_file
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas       745 Mar 25 22:25 pilotlog.txt
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas   2217581 Mar 25 22:25 log.49176589._000135.job.log.1
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas       357 Mar 25 22:25 output.list
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas       620 Mar 25 22:25 runtime_log
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas   2723840 Mar 25 22:25 result.tar.gz
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas       663 Mar 25 22:25 WRgKDmrUlM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8TxLDm2KH6Wm.diag
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas      9342 Mar 25 22:25 runtime_log.err
[2026-03-25 22:25:24] -rw-r--r-- 1 boincer umatlas     21348 Mar 25 22:25 stderr.txt
[2026-03-25 22:25:24] HITS file was successfully produced:
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas 224950607 Mar 25 22:24 shared/HITS.pool.root.1
[2026-03-25 22:25:24]  *** Contents of shared directory: ***
[2026-03-25 22:25:24] total 460636
[2026-03-25 22:25:24] -rw-r--r-- 2 boincer umatlas 243393896 Mar 25 17:55 ATLAS.root_0
[2026-03-25 22:25:24] -rw-r--r-- 2 boincer umatlas    597529 Mar 25 17:55 input.tar.gz
[2026-03-25 22:25:24] -rw-r--r-- 2 boincer umatlas     15845 Mar 25 17:55 start_atlas.sh
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas 224950607 Mar 25 22:24 HITS.pool.root.1
[2026-03-25 22:25:24] -rw------- 1 boincer umatlas   2723840 Mar 25 22:25 result.tar.gz
22:25:26 (22555): run_atlas exited; CPU time 115136.747354
22:25:26 (22555): called boinc_finish(0)

</stderr_txt>
]]>

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