Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:10:53 (1251): wrapper (7.7.26015): starting
17:10:53 (1251): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 17:10:53] Arguments: --nthreads 8
[2026-03-26 17:10:53] Threads: 8
[2026-03-26 17:10:53] Checking for CVMFS
[2026-03-26 17:10:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 17:10:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 17:10:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 17:10:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 17:10:56] 2.11.2.0 4234 145078 142500 157725 3 269 15125522 25165825 4701 130560 155 43694000 99.823 32160543 937 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-26 17:10:56] CVMFS is ok
[2026-03-26 17:10:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 17:10:56] Checking for apptainer binary...
[2026-03-26 17:10:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 17:10:56] Running /usr/bin/apptainer --version
[2026-03-26 17:10:56] apptainer version 1.3.2-1.el7
[2026-03-26 17:10:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 17:11:05] cg-vwn359.simple-grid.lan
[2026-03-26 17:11:05] apptainer works
[2026-03-26 17:11:05] Set ATHENA_PROC_NUMBER=8
[2026-03-26 17:11:05] Set ATHENA_CORE_NUMBER=8
[2026-03-26 17:11:06] Starting ATLAS job with PandaID=7057313540
[2026-03-26 17:11:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-27 02:08:32]  *** The last 200 lines of the pilot log: ***
[2026-03-27 02:08:32] 2026-03-27 01:07:21,381 | INFO     | log transfer has been attempted: DONE
[2026-03-27 02:08:32] 2026-03-27 01:07:21,381 | INFO     | job 7057313540 has finished - writing final server update
[2026-03-27 02:08:32] 2026-03-27 01:07:21,381 | INFO     | total number of processed events: 400 (read)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,383 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7057313540/memory_monitor_summary.json (trf name=prmon)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,384 | INFO     | extracted standard info from prmon json
[2026-03-27 02:08:32] 2026-03-27 01:07:21,384 | INFO     | extracted standard memory fields from prmon json
[2026-03-27 02:08:32] 2026-03-27 01:07:21,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-27 02:08:32] 2026-03-27 01:07:21,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-27 02:08:32] 2026-03-27 01:07:21,385 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-27 02:08:32] 2026-03-27 01:07:21,394 | INFO     | fitting pss+swap vs Time
[2026-03-27 02:08:32] 2026-03-27 01:07:21,395 | INFO     | sum of square deviations: 43098889949.5
[2026-03-27 02:08:32] 2026-03-27 01:07:21,404 | INFO     | sum of deviations: 135277236698.00002
[2026-03-27 02:08:32] 2026-03-27 01:07:21,404 | INFO     | mean x: 1774557813.5
[2026-03-27 02:08:32] 2026-03-27 01:07:21,404 | INFO     | mean y: 2495532.7644787645
[2026-03-27 02:08:32] 2026-03-27 01:07:21,405 | INFO     | intersect: -5567422338.72608
[2026-03-27 02:08:32] 2026-03-27 01:07:21,405 | INFO     | chi2: 6.044835570187536
[2026-03-27 02:08:32] 2026-03-27 01:07:21,406 | INFO     | sum of square deviations: 41862857472.0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,414 | INFO     | sum of deviations: 168383917185.00006
[2026-03-27 02:08:32] 2026-03-27 01:07:21,415 | INFO     | mean x: 1774557661.0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,415 | INFO     | mean y: 2499583.9512670566
[2026-03-27 02:08:32] 2026-03-27 01:07:21,415 | INFO     | intersect: -7135258999.052501
[2026-03-27 02:08:32] 2026-03-27 01:07:21,416 | INFO     | chi2: 5.293056779848257
[2026-03-27 02:08:32] 2026-03-27 01:07:21,416 | INFO     | current chi2=5.293056779848257 (change=12.436711993407554 %)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,416 | INFO     | right removable region: 512
[2026-03-27 02:08:32] 2026-03-27 01:07:21,417 | INFO     | sum of square deviations: 41862857472.0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,425 | INFO     | sum of deviations: -43479288969.000015
[2026-03-27 02:08:32] 2026-03-27 01:07:21,425 | INFO     | mean x: 1774557966.0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,426 | INFO     | mean y: 2517576.50877193
[2026-03-27 02:08:32] 2026-03-27 01:07:21,426 | INFO     | intersect: 1845595743.0567935
[2026-03-27 02:08:32] 2026-03-27 01:07:21,426 | INFO     | chi2: 1.7137806947050334
[2026-03-27 02:08:32] 2026-03-27 01:07:21,427 | INFO     | current chi2=1.7137806947050334 (change=71.64884512066446 %)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,428 | INFO     | sum of square deviations: 40650685907.0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,435 | INFO     | sum of deviations: -101196605841.50002
[2026-03-27 02:08:32] 2026-03-27 01:07:21,436 | INFO     | mean x: 1774558118.5
[2026-03-27 02:08:32] 2026-03-27 01:07:21,436 | INFO     | mean y: 2524808.69488189
[2026-03-27 02:08:32] 2026-03-27 01:07:21,436 | INFO     | intersect: 4420144203.1502905
[2026-03-27 02:08:32] 2026-03-27 01:07:21,437 | INFO     | chi2: 1.0242270781434133
[2026-03-27 02:08:32] 2026-03-27 01:07:21,437 | INFO     | current chi2=1.0242270781434133 (change=40.23581422594461 %)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,438 | INFO     | sum of square deviations: 39462142692.0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,445 | INFO     | sum of deviations: -105810246078.00002
[2026-03-27 02:08:32] 2026-03-27 01:07:21,446 | INFO     | mean x: 1774558271.0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,446 | INFO     | mean y: 2525396.8727634195
[2026-03-27 02:08:32] 2026-03-27 01:07:21,446 | INFO     | intersect: 4760666605.771828
[2026-03-27 02:08:32] 2026-03-27 01:07:21,447 | INFO     | chi2: 1.010328598298377
[2026-03-27 02:08:32] 2026-03-27 01:07:21,447 | INFO     | current chi2=1.010328598298377 (change=1.3569725055726616 %)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,448 | INFO     | left removable region: 30
[2026-03-27 02:08:32] 2026-03-27 01:07:21,448 | INFO     | sum of square deviations: 34723034300.5
[2026-03-27 02:08:32] 2026-03-27 01:07:21,456 | INFO     | sum of deviations: -25828330158.500004
[2026-03-27 02:08:32] 2026-03-27 01:07:21,456 | INFO     | mean x: 1774558545.5
[2026-03-27 02:08:32] 2026-03-27 01:07:21,456 | INFO     | mean y: 2523644.1307053943
[2026-03-27 02:08:32] 2026-03-27 01:07:21,456 | INFO     | intersect: 1322508631.678339
[2026-03-27 02:08:32] 2026-03-27 01:07:21,457 | INFO     | chi2: 0.15146858507376476
[2026-03-27 02:08:32] 2026-03-27 01:07:21,457 | INFO     | current memory leak: -0.74 B/s (using 482 data points, chi2=0.15)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,458 | INFO     | could have reported an average CPU frequency of 1999 MHz (21 samples)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | ..............................
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | . Timing measurements:
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | . get job = 0 s
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | . initial setup = 103 s
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | . payload setup = 140 s
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | . stage-in = 0 s
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | . payload execution = 31690 s
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | . stage-out = 3 s
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | . log creation = 1 s
[2026-03-27 02:08:32] 2026-03-27 01:07:21,459 | INFO     | ..............................
[2026-03-27 02:08:32] 2026-03-27 01:07:21,582 | INFO     | 
[2026-03-27 02:08:32] 2026-03-27 01:07:21,583 | INFO     | job summary report
[2026-03-27 02:08:32] 2026-03-27 01:07:21,583 | INFO     | --------------------------------------------------
[2026-03-27 02:08:32] 2026-03-27 01:07:21,583 | INFO     | PanDA job id: 7057313540
[2026-03-27 02:08:32] 2026-03-27 01:07:21,583 | INFO     | task id: 49176589
[2026-03-27 02:08:32] 2026-03-27 01:07:21,583 | INFO     | errors: (none)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,583 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-27 02:08:32] 2026-03-27 01:07:21,583 | INFO     | pilot state: finished 
[2026-03-27 02:08:32] 2026-03-27 01:07:21,583 | INFO     | transexitcode: 0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,583 | INFO     | exeerrorcode: 0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,584 | INFO     | exeerrordiag: 
[2026-03-27 02:08:32] 2026-03-27 01:07:21,584 | INFO     | exitcode: 0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,584 | INFO     | exitmsg: OK
[2026-03-27 02:08:32] 2026-03-27 01:07:21,584 | INFO     | cpuconsumptiontime: 124728 s
[2026-03-27 02:08:32] 2026-03-27 01:07:21,584 | INFO     | nevents: 400
[2026-03-27 02:08:32] 2026-03-27 01:07:21,584 | INFO     | neventsw: 0
[2026-03-27 02:08:32] 2026-03-27 01:07:21,584 | INFO     | pid: 9633
[2026-03-27 02:08:32] 2026-03-27 01:07:21,584 | INFO     | pgrp: 9633
[2026-03-27 02:08:32] 2026-03-27 01:07:21,584 | INFO     | corecount: 8
[2026-03-27 02:08:32] 2026-03-27 01:07:21,585 | INFO     | event service: False
[2026-03-27 02:08:32] 2026-03-27 01:07:21,585 | INFO     | sizes: {0: 2279795, 1: 2280252, 2: 2280312, 12: 2280340, 31835: 2318876, 31839: 2327876, 31841: 2328060, 31843: 2328254}
[2026-03-27 02:08:32] 2026-03-27 01:07:21,585 | INFO     | --------------------------------------------------
[2026-03-27 02:08:32] 2026-03-27 01:07:21,585 | INFO     | 
[2026-03-27 02:08:32] 2026-03-27 01:07:21,585 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-27 02:08:32] 2026-03-27 01:07:21,953 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,953 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,953 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,953 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,955 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,958 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-27 02:08:32] 2026-03-27 01:07:21,959 | INFO     | job 7057313540 has completed (purged errors)
[2026-03-27 02:08:32] 2026-03-27 01:07:21,959 | INFO     | overall cleanup function is called
[2026-03-27 02:08:32] 2026-03-27 01:07:22,971 | INFO     | --- collectZombieJob: --- 10, [9633]
[2026-03-27 02:08:32] 2026-03-27 01:07:22,971 | INFO     | zombie collector waiting for pid 9633
[2026-03-27 02:08:32] 2026-03-27 01:07:22,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-27 02:08:32] 2026-03-27 01:07:22,972 | INFO     | collected zombie processes
[2026-03-27 02:08:32] 2026-03-27 01:07:22,972 | INFO     | will attempt to kill all subprocesses of pid=9633
[2026-03-27 02:08:32] 2026-03-27 01:07:23,133 | INFO     | process IDs to be killed: [9633] (in reverse order)
[2026-03-27 02:08:32] 2026-03-27 01:07:24,128 | WARNING  | found no corresponding commands to process id(s)
[2026-03-27 02:08:32] 2026-03-27 01:07:24,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-27 02:08:32] 2026-03-27 01:07:24,131 | INFO     | did not find any defunct processes belonging to 9633
[2026-03-27 02:08:32] 2026-03-27 01:07:24,134 | INFO     | did not find any defunct processes belonging to 9633
[2026-03-27 02:08:32] 2026-03-27 01:07:24,135 | INFO     | ready for new job
[2026-03-27 02:08:32] 2026-03-27 01:07:24,135 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-27 02:08:32] 2026-03-27 01:07:24,138 | INFO     | **************************************
[2026-03-27 02:08:32] 2026-03-27 01:07:24,138 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-27 02:08:32] 2026-03-27 01:07:24,138 | INFO     | **************************************
[2026-03-27 02:08:32] 2026-03-27 01:07:24,138 | INFO     | 
[2026-03-27 02:08:32] 2026-03-27 01:07:24,139 | INFO     | pilot is running in a VM
[2026-03-27 02:08:32] 2026-03-27 01:07:24,139 | INFO     | architecture information:
[2026-03-27 02:08:32] 2026-03-27 01:07:24,151 | INFO     | executing command: cat /etc/os-release
[2026-03-27 02:08:32] 2026-03-27 01:07:24,404 | INFO     | cat /etc/os-release:
[2026-03-27 02:08:32] NAME="CentOS Linux"
[2026-03-27 02:08:32] VERSION="7 (Core)"
[2026-03-27 02:08:32] ID="centos"
[2026-03-27 02:08:32] ID_LIKE="rhel fedora"
[2026-03-27 02:08:32] VERSION_ID="7"
[2026-03-27 02:08:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-27 02:08:32] ANSI_COLOR="0;31"
[2026-03-27 02:08:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-27 02:08:32] HOME_URL="https://www.centos.org/"
[2026-03-27 02:08:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-27 02:08:32] 
[2026-03-27 02:08:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-27 02:08:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-27 02:08:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-27 02:08:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-27 02:08:32] 
[2026-03-27 02:08:32] 2026-03-27 01:07:24,404 | INFO     | **************************************
[2026-03-27 02:08:32] 2026-03-27 01:07:24,907 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-27 02:08:32] 2026-03-27 01:07:25,136 | INFO     | sufficient remaining disk space (496989372416 B)
[2026-03-27 02:08:32] 2026-03-27 01:07:25,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-27 02:08:32] 2026-03-27 01:07:25,136 | INFO     | current server update state: UPDATING_FINAL
[2026-03-27 02:08:32] 2026-03-27 01:07:25,137 | INFO     | update_server=False
[2026-03-27 02:08:32] 2026-03-27 01:07:25,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-27 02:08:32] 2026-03-27 01:07:25,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-27 02:08:32] 2026-03-27 01:07:25,140 | INFO     | aborting loop
[2026-03-27 02:08:32] 2026-03-27 01:07:25,314 | INFO     | all job control threads have been joined
[2026-03-27 02:08:32] 2026-03-27 01:07:25,322 | INFO     | all payload control threads have been joined
[2026-03-27 02:08:32] 2026-03-27 01:07:25,424 | INFO     | all data control threads have been joined
[2026-03-27 02:08:32] 2026-03-27 01:07:25,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-27 02:08:32] 2026-03-27 01:07:26,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-27 02:08:32] 2026-03-27 01:07:26,142 | INFO     | [job] retrieve thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:26,145 | INFO     | [job] job monitor thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:26,320 | INFO     | [job] control thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:26,328 | INFO     | [payload] control thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:26,382 | INFO     | [payload] validate_post thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:26,429 | INFO     | [data] control thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:26,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-27 02:08:32] 2026-03-27 01:07:27,011 | INFO     | [payload] execute_payloads thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:27,128 | INFO     | [job] create_data_payload thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:27,132 | INFO     | [data] copytool_in thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:27,193 | INFO     | [payload] validate_pre thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:27,214 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:27,294 | INFO     | [job] validate thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:27,412 | INFO     | [payload] failed_post thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:27,602 | INFO     | [job] queue monitor thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:28,102 | INFO     | [data] copytool_out thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:29,760 | INFO     | [data] queue_monitor thread has finished
[2026-03-27 02:08:32] 2026-03-27 01:07:54,246 | INFO     | PID=5146 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-27 02:08:32] 2026-03-27 01:07:54,246 | INFO     | .. there are 9 such processes running
[2026-03-27 02:08:32] 2026-03-27 01:07:54,247 | INFO     | found 0 job(s) in 20 queues
[2026-03-27 02:08:32] 2026-03-27 01:07:54,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-27 02:08:32] 2026-03-27 01:07:54,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-27 02:08:32] 2026-03-27 01:08:21,091 | INFO     | [monitor] cgroup control has ended
[2026-03-27 02:08:32] 2026-03-27 01:08:22,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664159721280)>', '<ExcThread(monitor, started 139663721350912)>']
[2026-03-27 02:08:32] 2026-03-27 01:08:23,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-27 02:08:32] 2026-03-27 01:08:23,417 | INFO     | [monitor] control thread has ended
[2026-03-27 02:08:32] 2026-03-27 01:08:27,922 | INFO     | all workflow threads have been joined
[2026-03-27 02:08:32] 2026-03-27 01:08:27,922 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-27 02:08:32] 2026-03-27 01:08:27,923 | INFO     | traces error code: 0
[2026-03-27 02:08:32] 2026-03-27 01:08:27,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-27 02:08:32] 2026-03-27 01:08:28,206 [wrapper] ==== pilot stdout END ====
[2026-03-27 02:08:32] 2026-03-27 01:08:28,221 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-27 02:08:32] 2026-03-27 01:08:28,259 [wrapper] pilotpid: 5146
[2026-03-27 02:08:32] 2026-03-27 01:08:28,352 [wrapper] Pilot exit status: 0
[2026-03-27 02:08:32] 2026-03-27 01:08:28,782 [wrapper] pandaids: 7057313540
[2026-03-27 02:08:32] 2026-03-27 01:08:29,895 [wrapper] cleanup supervisor_pilot  4967 5147
[2026-03-27 02:08:32] 2026-03-27 01:08:29,898 [wrapper] Test setup, not cleaning
[2026-03-27 02:08:32] 2026-03-27 01:08:29,930 [wrapper] apfmon messages muted
[2026-03-27 02:08:32] 2026-03-27 01:08:30,047 [wrapper] ==== wrapper stdout END ====
[2026-03-27 02:08:32] 2026-03-27 01:08:30,167 [wrapper] ==== wrapper stderr END ====
[2026-03-27 02:08:32]  *** Error codes and diagnostics ***
[2026-03-27 02:08:32]     "exeErrorCode": 0,
[2026-03-27 02:08:32]     "exeErrorDiag": "",
[2026-03-27 02:08:32]     "pilotErrorCode": 0,
[2026-03-27 02:08:32]     "pilotErrorDiag": "",
[2026-03-27 02:08:32]  *** Listing of results directory ***
[2026-03-27 02:08:32] total 470656
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc      5111 Mar 17 16:25 queuedata.json
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc    585013 Mar 17 16:25 pilot3.tar.gz
[2026-03-27 02:08:32] -rwx------. 1 boinc boinc     36322 Mar 17 16:26 runpilot2-wrapper.sh
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc       100 Mar 26 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-27 02:08:32] -rwxr-xr-x. 1 boinc boinc      7986 Mar 26 17:10 run_atlas
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc       105 Mar 26 17:10 job.xml
[2026-03-27 02:08:32] -rw-r--r--. 2 boinc boinc 239440552 Mar 26 17:10 EVNT.49134465._000003.pool.root.1
[2026-03-27 02:08:32] drwxrwx--x. 2 boinc boinc        68 Mar 26 17:10 shared
[2026-03-27 02:08:32] -rw-r--r--. 2 boinc boinc    597527 Mar 26 17:10 input.tar.gz
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc      6393 Mar 26 17:10 init_data.xml
[2026-03-27 02:08:32] -rw-r--r--. 2 boinc boinc     15845 Mar 26 17:10 start_atlas.sh
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc         0 Mar 26 17:10 boinc_lockfile
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc      2598 Mar 26 17:11 pandaJob.out
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc       415 Mar 26 17:16 workernode_map.json
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc   1011812 Mar 26 17:16 agis_schedconf.cvmfs.json
[2026-03-27 02:08:32] drwx------. 5 boinc boinc      4096 Mar 26 17:16 pilot3
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc 228400135 Mar 27 02:05 HITS.49176589._000070.pool.root.1
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc       532 Mar 27 02:06 boinc_task_state.xml
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc      1014 Mar 27 02:07 memory_monitor_summary.json
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc   1511579 Mar 27 02:07 agis_ddmendpoints.agis.ALL.json
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc    708373 Mar 27 02:07 log.49176589._000070.job.log.tgz.1
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc      6313 Mar 27 02:07 heartbeat.json
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc        95 Mar 27 02:07 pilot_heartbeat.json
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc      8192 Mar 27 02:08 boinc_mmap_file
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc        29 Mar 27 02:08 wrapper_checkpoint.txt
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc      4880 Mar 27 02:08 pilotlog.txt
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc   4379021 Mar 27 02:08 log.49176589._000070.job.log.1
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc       357 Mar 27 02:08 output.list
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc       620 Mar 27 02:08 runtime_log
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc   5109760 Mar 27 02:08 result.tar.gz
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc      8832 Mar 27 02:08 runtime_log.err
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc       658 Mar 27 02:08 0kFNDmgUlM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZS0LDmqmjYEn.diag
[2026-03-27 02:08:32] -rw-r--r--. 1 boinc boinc     20718 Mar 27 02:08 stderr.txt
[2026-03-27 02:08:32] HITS file was successfully produced:
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc 228400135 Mar 27 02:05 shared/HITS.pool.root.1
[2026-03-27 02:08:32]  *** Contents of shared directory: ***
[2026-03-27 02:08:32] total 462472
[2026-03-27 02:08:32] -rw-r--r--. 2 boinc boinc 239440552 Mar 26 17:10 ATLAS.root_0
[2026-03-27 02:08:32] -rw-r--r--. 2 boinc boinc    597527 Mar 26 17:10 input.tar.gz
[2026-03-27 02:08:32] -rw-r--r--. 2 boinc boinc     15845 Mar 26 17:10 start_atlas.sh
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc 228400135 Mar 27 02:05 HITS.pool.root.1
[2026-03-27 02:08:32] -rw-------. 1 boinc boinc   5109760 Mar 27 02:08 result.tar.gz
02:08:34 (1251): run_atlas exited; CPU time 125216.688518
02:08:34 (1251): called boinc_finish(0)

</stderr_txt>
]]>

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