Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:45:21 (1072619): wrapper (7.7.26015): starting
19:45:21 (1072619): wrapper: running run_atlas (--nthreads 3)
[2026-03-27 19:45:21] Arguments: --nthreads 3
[2026-03-27 19:45:21] Threads: 3
[2026-03-27 19:45:21] Checking for CVMFS
[2026-03-27 19:45:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-27 19:45:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-27 19:45:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-27 19:45:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-27 19:45:24] 2.9.2.0 387596 7225 86936 157765 1 188 27154015 36864000 0 130560 0 2341849 99.979 252070 9588 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-27 19:45:24] CVMFS is ok
[2026-03-27 19:45:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-27 19:45:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-27 19:45:24] Further information can be found at the LHC@home message board.
[2026-03-27 19:45:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-27 19:45:24] Checking for apptainer binary...
[2026-03-27 19:45:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-27 19:45:24] Running /usr/bin/apptainer --version
[2026-03-27 19:45:24] apptainer version 1.4.1-1.1
[2026-03-27 19:45:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-27 19:45:24] cosA127
[2026-03-27 19:45:24] apptainer works
[2026-03-27 19:45:24] Set ATHENA_PROC_NUMBER=3
[2026-03-27 19:45:24] Set ATHENA_CORE_NUMBER=3
[2026-03-27 19:45:24] Starting ATLAS job with PandaID=7057277327
[2026-03-27 19:45:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-27 22:58:55]  *** The last 200 lines of the pilot log: ***
[2026-03-27 22:58:55] 2026-03-27 21:58:19,180 | INFO     | [job] control thread has finished
[2026-03-27 22:58:55] 2026-03-27 21:58:19,182 | INFO     | [job] create_data_payload thread has finished
[2026-03-27 22:58:55] 2026-03-27 21:58:19,230 | INFO     | [payload] control thread has finished
[2026-03-27 22:58:55] 2026-03-27 21:58:19,235 | INFO     | [payload] validate_pre thread has finished
[2026-03-27 22:58:55] 2026-03-27 21:58:19,376 | INFO     | [payload] failed_post thread has finished
[2026-03-27 22:58:55] 2026-03-27 21:58:19,446 | INFO     | [data] copytool_in thread has finished
[2026-03-27 22:58:55] 2026-03-27 21:58:20,299 | WARNING  | process 1081105 can no longer be monitored (due to stat problems) - aborting
[2026-03-27 22:58:55] 2026-03-27 21:58:20,331 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-27 22:58:55] 2026-03-27 21:58:20,371 | INFO     | number of running child processes to parent process 1081105: 1
[2026-03-27 22:58:55] 2026-03-27 21:58:20,372 | INFO     | maximum number of monitored processes: 6
[2026-03-27 22:58:55] 2026-03-27 21:58:20,372 | INFO     | aborting job monitoring since job object (job id=7057277327) has expired
[2026-03-27 22:58:55] 2026-03-27 21:58:20,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-27 22:58:55] 2026-03-27 21:58:20,372 | INFO     | will abort loop
[2026-03-27 22:58:55] 2026-03-27 21:58:21,014 | INFO     | [data] queue_monitor thread has finished
[2026-03-27 22:58:55] 2026-03-27 21:58:21,378 | INFO     | [job] job monitor thread has finished
[2026-03-27 22:58:55] 2026-03-27 21:58:46,987 | INFO     | PID=1076673 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-27 22:58:55] 2026-03-27 21:58:46,987 | INFO     | found 0 job(s) in 20 queues
[2026-03-27 22:58:55] 2026-03-27 21:58:46,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-27 22:58:55] 2026-03-27 21:58:46,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-27 22:58:55] 2026-03-27 21:58:49,186 | INFO     | [monitor] cgroup control has ended
[2026-03-27 22:58:55] 2026-03-27 21:58:50,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021269305152)>', '<ExcThread(monitor, started 140020916655872)>']
[2026-03-27 22:58:55] 2026-03-27 21:58:51,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-27 22:58:55] 2026-03-27 21:58:51,008 | INFO     | [monitor] control thread has ended
[2026-03-27 22:58:55] 2026-03-27 21:58:55,735 | INFO     | all workflow threads have been joined
[2026-03-27 22:58:55] 2026-03-27 21:58:55,736 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-27 22:58:55] 2026-03-27 21:58:55,736 | INFO     | traces error code: 0
[2026-03-27 22:58:55] 2026-03-27 21:58:55,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-27 22:58:55] 2026-03-27 21:58:55,787 [wrapper] ==== pilot stdout END ====
[2026-03-27 22:58:55] 2026-03-27 21:58:55,790 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-27 22:58:55] 2026-03-27 21:58:55,792 [wrapper] pilotpid: 1076673
[2026-03-27 22:58:55] 2026-03-27 21:58:55,795 [wrapper] Pilot exit status: 0
[2026-03-27 22:58:55] 2026-03-27 21:58:55,802 [wrapper] pandaids: 7057277327
[2026-03-27 22:58:55] 2026-03-27 21:58:55,819 [wrapper] cleanup supervisor_pilot 1088963 1076674
[2026-03-27 22:58:55] 2026-03-27 21:58:55,821 [wrapper] Test setup, not cleaning
[2026-03-27 22:58:55] 2026-03-27 21:58:55,823 [wrapper] apfmon messages muted
[2026-03-27 22:58:55] 2026-03-27 21:58:55,826 [wrapper] ==== wrapper stdout END ====
[2026-03-27 22:58:55] 2026-03-27 21:58:55,828 [wrapper] ==== wrapper stderr END ====
[2026-03-27 22:58:55]  *** Error codes and diagnostics ***
[2026-03-27 22:58:55]     "exeErrorCode": 0,
[2026-03-27 22:58:55]     "exeErrorDiag": "",
[2026-03-27 22:58:55]     "pilotErrorCode": 0,
[2026-03-27 22:58:55]     "pilotErrorDiag": "",
[2026-03-27 22:58:55]  *** Listing of results directory ***
[2026-03-27 22:58:55] total 486432
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc      5111 Mar 17 16:25 queuedata.json
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc    585013 Mar 17 16:25 pilot3.tar.gz
[2026-03-27 22:58:55] -rwx------ 1 boinc boinc     36322 Mar 17 16:26 runpilot2-wrapper.sh
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc       100 Mar 27 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-27 22:58:55] -rwxr-xr-x 1 boinc boinc      7986 Mar 27 19:45 run_atlas
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc       105 Mar 27 19:45 job.xml
[2026-03-27 22:58:55] -rw-r--r-- 2 boinc boinc 243941885 Mar 27 19:45 EVNT.49134425._000001.pool.root.1
[2026-03-27 22:58:55] -rw-r--r-- 2 boinc boinc    597540 Mar 27 19:45 input.tar.gz
[2026-03-27 22:58:55] -rw-r--r-- 2 boinc boinc     15845 Mar 27 19:45 start_atlas.sh
[2026-03-27 22:58:55] drwxrwx--x 2 boinc boinc      4096 Mar 27 19:45 shared
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc         0 Mar 27 19:45 boinc_setup_complete
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc      6440 Mar 27 19:45 init_data.xml
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc         0 Mar 27 19:45 boinc_lockfile
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc      2609 Mar 27 19:45 pandaJob.out
[2026-03-27 22:58:55] -rw------- 1 boinc boinc   1005169 Mar 27 19:45 agis_schedconf.cvmfs.json
[2026-03-27 22:58:55] -rw------- 1 boinc boinc       427 Mar 27 19:45 workernode_map.json
[2026-03-27 22:58:55] drwx------ 5 boinc boinc      4096 Mar 27 19:45 pilot3
[2026-03-27 22:58:55] -rw------- 1 boinc boinc 246273565 Mar 27 22:57 HITS.49176578._000013.pool.root.1
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc       530 Mar 27 22:57 boinc_task_state.xml
[2026-03-27 22:58:55] -rw------- 1 boinc boinc      1023 Mar 27 22:58 memory_monitor_summary.json
[2026-03-27 22:58:55] -rw------- 1 boinc boinc   1511579 Mar 27 22:58 agis_ddmendpoints.agis.ALL.json
[2026-03-27 22:58:55] -rw------- 1 boinc boinc    348643 Mar 27 22:58 log.49176578._000013.job.log.tgz.1
[2026-03-27 22:58:55] -rw------- 1 boinc boinc      6308 Mar 27 22:58 heartbeat.json
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc      8192 Mar 27 22:58 boinc_mmap_file
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc        28 Mar 27 22:58 wrapper_checkpoint.txt
[2026-03-27 22:58:55] -rw------- 1 boinc boinc        95 Mar 27 22:58 pilot_heartbeat.json
[2026-03-27 22:58:55] -rw------- 1 boinc boinc      5272 Mar 27 22:58 pilotlog.txt
[2026-03-27 22:58:55] -rw------- 1 boinc boinc   1634764 Mar 27 22:58 log.49176578._000013.job.log.1
[2026-03-27 22:58:55] -rw------- 1 boinc boinc       357 Mar 27 22:58 output.list
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc       620 Mar 27 22:58 runtime_log
[2026-03-27 22:58:55] -rw------- 1 boinc boinc   1996800 Mar 27 22:58 result.tar.gz
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc      8902 Mar 27 22:58 runtime_log.err
[2026-03-27 22:58:55] -rw------- 1 boinc boinc       661 Mar 27 22:58 WhdLDmUUlM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7QxLDmSLsDLn.diag
[2026-03-27 22:58:55] -rw-r--r-- 1 boinc boinc      6340 Mar 27 22:58 stderr.txt
[2026-03-27 22:58:55] HITS file was successfully produced:
[2026-03-27 22:58:55] -rw------- 1 boinc boinc 246273565 Mar 27 22:57 shared/HITS.pool.root.1
[2026-03-27 22:58:55]  *** Contents of shared directory: ***
[2026-03-27 22:58:55] total 481292
[2026-03-27 22:58:55] -rw-r--r-- 2 boinc boinc 243941885 Mar 27 19:45 ATLAS.root_0
[2026-03-27 22:58:55] -rw-r--r-- 2 boinc boinc    597540 Mar 27 19:45 input.tar.gz
[2026-03-27 22:58:55] -rw-r--r-- 2 boinc boinc     15845 Mar 27 19:45 start_atlas.sh
[2026-03-27 22:58:55] -rw------- 1 boinc boinc 246273565 Mar 27 22:57 HITS.pool.root.1
[2026-03-27 22:58:55] -rw------- 1 boinc boinc   1996800 Mar 27 22:58 result.tar.gz
22:58:57 (1072619): run_atlas exited; CPU time 33648.295362
22:58:57 (1072619): called boinc_finish(0)

</stderr_txt>
]]>

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