Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:08:14 (29773): wrapper (7.7.26015): starting
13:08:14 (29773): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 13:08:14] Arguments: --nthreads 8
[2026-03-26 13:08:14] Threads: 8
[2026-03-26 13:08:14] Checking for CVMFS
[2026-03-26 13:08:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 13:08:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 13:08:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 13:08:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 13:08:15] 2.11.2.0 773 144817 139216 157718 3 269 20351859 25165824 4620 130560 153 43726073 99.819 33202460 1163 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-26 13:08:15] CVMFS is ok
[2026-03-26 13:08:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 13:08:15] Checking for apptainer binary...
[2026-03-26 13:08:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 13:08:15] Running /usr/bin/apptainer --version
[2026-03-26 13:08:15] apptainer version 1.3.2-1.el7
[2026-03-26 13:08:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 13:08:23] cg-vwn384.simple-grid.lan
[2026-03-26 13:08:23] apptainer works
[2026-03-26 13:08:23] Set ATHENA_PROC_NUMBER=8
[2026-03-26 13:08:23] Set ATHENA_CORE_NUMBER=8
[2026-03-26 13:08:23] Starting ATLAS job with PandaID=7057144992
[2026-03-26 13:08:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 21:14:04]  *** The last 200 lines of the pilot log: ***
[2026-03-26 21:14:04] 2026-03-26 20:12:56,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,845 | INFO     | job 7057144992 has state=finished
[2026-03-26 21:14:04] 2026-03-26 20:12:56,845 | INFO     | preparing for final server update for job 7057144992 in state='finished'
[2026-03-26 21:14:04] 2026-03-26 20:12:56,846 | INFO     | reading metadata from: /var/lib/boinc/slots/13/PanDA_Pilot-7057144992/jobReport.json
[2026-03-26 21:14:04] 2026-03-26 20:12:56,849 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/13/workernode_map.json
[2026-03-26 21:14:04] 2026-03-26 20:12:56,849 | INFO     | this job has now completed (state=finished)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,849 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,849 | INFO     | log transfer has been attempted: DONE
[2026-03-26 21:14:04] 2026-03-26 20:12:56,850 | INFO     | job 7057144992 has finished - writing final server update
[2026-03-26 21:14:04] 2026-03-26 20:12:56,850 | INFO     | total number of processed events: 400 (read)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,852 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-7057144992/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,853 | INFO     | extracted standard info from prmon json
[2026-03-26 21:14:04] 2026-03-26 20:12:56,853 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 21:14:04] 2026-03-26 20:12:56,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 21:14:04] 2026-03-26 20:12:56,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 21:14:04] 2026-03-26 20:12:56,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 21:14:04] 2026-03-26 20:12:56,862 | INFO     | fitting pss+swap vs Time
[2026-03-26 21:14:04] 2026-03-26 20:12:56,863 | INFO     | sum of square deviations: 31784398737.0
[2026-03-26 21:14:04] 2026-03-26 20:12:56,874 | INFO     | sum of deviations: 200530535843.49997
[2026-03-26 21:14:04] 2026-03-26 20:12:56,875 | INFO     | mean x: 1774541681.5
[2026-03-26 21:14:04] 2026-03-26 20:12:56,875 | INFO     | mean y: 2495446.185897436
[2026-03-26 21:14:04] 2026-03-26 20:12:56,875 | INFO     | intersect: -11193242349.966846
[2026-03-26 21:14:04] 2026-03-26 20:12:56,876 | INFO     | chi2: 5.785802532037451
[2026-03-26 21:14:04] 2026-03-26 20:12:56,876 | INFO     | sum of square deviations: 30776510072.0
[2026-03-26 21:14:04] 2026-03-26 20:12:56,883 | INFO     | sum of deviations: 229390524217.00003
[2026-03-26 21:14:04] 2026-03-26 20:12:56,883 | INFO     | mean x: 1774541529.0
[2026-03-26 21:14:04] 2026-03-26 20:12:56,883 | INFO     | mean y: 2499771.5723542115
[2026-03-26 21:14:04] 2026-03-26 20:12:56,883 | INFO     | intersect: -13223919033.868698
[2026-03-26 21:14:04] 2026-03-26 20:12:56,884 | INFO     | chi2: 5.031940425373341
[2026-03-26 21:14:04] 2026-03-26 20:12:56,884 | INFO     | current chi2=5.031940425373341 (change=13.029516691760309 %)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,884 | INFO     | right removable region: 462
[2026-03-26 21:14:04] 2026-03-26 20:12:56,885 | INFO     | sum of square deviations: 30776510072.0
[2026-03-26 21:14:04] 2026-03-26 20:12:56,897 | INFO     | sum of deviations: 32330263581.000107
[2026-03-26 21:14:04] 2026-03-26 20:12:56,897 | INFO     | mean x: 1774541834.0
[2026-03-26 21:14:04] 2026-03-26 20:12:56,897 | INFO     | mean y: 2520884.7451403886
[2026-03-26 21:14:04] 2026-03-26 20:12:56,897 | INFO     | intersect: -1861608774.352464
[2026-03-26 21:14:04] 2026-03-26 20:12:56,898 | INFO     | chi2: 1.1146931842238335
[2026-03-26 21:14:04] 2026-03-26 20:12:56,898 | INFO     | current chi2=1.1146931842238335 (change=80.73399190429511 %)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,899 | INFO     | sum of square deviations: 29790156694.5
[2026-03-26 21:14:04] 2026-03-26 20:12:56,905 | INFO     | sum of deviations: 1097097657.5
[2026-03-26 21:14:04] 2026-03-26 20:12:56,905 | INFO     | mean x: 1774541986.5
[2026-03-26 21:14:04] 2026-03-26 20:12:56,905 | INFO     | mean y: 2525689.927947598
[2026-03-26 21:14:04] 2026-03-26 20:12:56,906 | INFO     | intersect: -62826294.50401018
[2026-03-26 21:14:04] 2026-03-26 20:12:56,906 | INFO     | chi2: 0.8480143603137547
[2026-03-26 21:14:04] 2026-03-26 20:12:56,906 | INFO     | current chi2=0.8480143603137547 (change=23.923966494490465 %)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,907 | INFO     | left removable region: 20
[2026-03-26 21:14:04] 2026-03-26 20:12:56,907 | INFO     | sum of square deviations: 26775834130.5
[2026-03-26 21:14:04] 2026-03-26 20:12:56,914 | INFO     | sum of deviations: 49244600787.5
[2026-03-26 21:14:04] 2026-03-26 20:12:56,914 | INFO     | mean x: 1774542108.5
[2026-03-26 21:14:04] 2026-03-26 20:12:56,914 | INFO     | mean y: 2527464.0022624433
[2026-03-26 21:14:04] 2026-03-26 20:12:56,914 | INFO     | intersect: -3261110086.476513
[2026-03-26 21:14:04] 2026-03-26 20:12:56,915 | INFO     | chi2: 0.005202300301956335
[2026-03-26 21:14:04] 2026-03-26 20:12:56,915 | INFO     | current memory leak: 1.84 B/s (using 442 data points, chi2=0.01)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,916 | INFO     | could have reported an average CPU frequency of 1999 MHz (19 samples)
[2026-03-26 21:14:04] 2026-03-26 20:12:56,916 | INFO     | ..............................
[2026-03-26 21:14:04] 2026-03-26 20:12:56,917 | INFO     | . Timing measurements:
[2026-03-26 21:14:04] 2026-03-26 20:12:56,917 | INFO     | . get job = 0 s
[2026-03-26 21:14:04] 2026-03-26 20:12:56,917 | INFO     | . initial setup = 104 s
[2026-03-26 21:14:04] 2026-03-26 20:12:56,917 | INFO     | . payload setup = 142 s
[2026-03-26 21:14:04] 2026-03-26 20:12:56,917 | INFO     | . stage-in = 0 s
[2026-03-26 21:14:04] 2026-03-26 20:12:56,917 | INFO     | . payload execution = 28631 s
[2026-03-26 21:14:04] 2026-03-26 20:12:56,917 | INFO     | . stage-out = 7 s
[2026-03-26 21:14:04] 2026-03-26 20:12:56,917 | INFO     | . log creation = 1 s
[2026-03-26 21:14:04] 2026-03-26 20:12:56,917 | INFO     | ..............................
[2026-03-26 21:14:04] 2026-03-26 20:12:57,133 | INFO     | 
[2026-03-26 21:14:04] 2026-03-26 20:12:57,133 | INFO     | job summary report
[2026-03-26 21:14:04] 2026-03-26 20:12:57,133 | INFO     | --------------------------------------------------
[2026-03-26 21:14:04] 2026-03-26 20:12:57,133 | INFO     | PanDA job id: 7057144992
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | task id: 49190944
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | errors: (none)
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | pilot state: finished 
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | transexitcode: 0
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | exeerrorcode: 0
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | exeerrordiag: 
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | exitcode: 0
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | exitmsg: OK
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | cpuconsumptiontime: 108431 s
[2026-03-26 21:14:04] 2026-03-26 20:12:57,134 | INFO     | nevents: 400
[2026-03-26 21:14:04] 2026-03-26 20:12:57,135 | INFO     | neventsw: 0
[2026-03-26 21:14:04] 2026-03-26 20:12:57,135 | INFO     | pid: 5692
[2026-03-26 21:14:04] 2026-03-26 20:12:57,135 | INFO     | pgrp: 5692
[2026-03-26 21:14:04] 2026-03-26 20:12:57,135 | INFO     | corecount: 8
[2026-03-26 21:14:04] 2026-03-26 20:12:57,135 | INFO     | event service: False
[2026-03-26 21:14:04] 2026-03-26 20:12:57,135 | INFO     | sizes: {0: 2279744, 1: 2280261, 2: 2280261, 28777: 2317265, 28778: 2317264, 28786: 2326320, 28789: 2326504, 28790: 2326698}
[2026-03-26 21:14:04] 2026-03-26 20:12:57,135 | INFO     | --------------------------------------------------
[2026-03-26 21:14:04] 2026-03-26 20:12:57,135 | INFO     | 
[2026-03-26 21:14:04] 2026-03-26 20:12:57,135 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2026-03-26 21:14:04] 2026-03-26 20:12:57,532 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,533 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,533 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,533 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,534 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 21:14:04] 2026-03-26 20:12:57,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,535 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 21:14:04] 2026-03-26 20:12:57,535 | INFO     | job 7057144992 has completed (purged errors)
[2026-03-26 21:14:04] 2026-03-26 20:12:57,535 | INFO     | overall cleanup function is called
[2026-03-26 21:14:04] 2026-03-26 20:12:58,544 | INFO     | --- collectZombieJob: --- 10, [5692]
[2026-03-26 21:14:04] 2026-03-26 20:12:58,544 | INFO     | zombie collector waiting for pid 5692
[2026-03-26 21:14:04] 2026-03-26 20:12:58,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 21:14:04] 2026-03-26 20:12:58,545 | INFO     | collected zombie processes
[2026-03-26 21:14:04] 2026-03-26 20:12:58,545 | INFO     | will attempt to kill all subprocesses of pid=5692
[2026-03-26 21:14:04] 2026-03-26 20:12:58,664 | INFO     | process IDs to be killed: [5692] (in reverse order)
[2026-03-26 21:14:04] 2026-03-26 20:12:59,549 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 21:14:04] 2026-03-26 20:12:59,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 21:14:04] 2026-03-26 20:12:59,553 | INFO     | did not find any defunct processes belonging to 5692
[2026-03-26 21:14:04] 2026-03-26 20:12:59,556 | INFO     | did not find any defunct processes belonging to 5692
[2026-03-26 21:14:04] 2026-03-26 20:12:59,556 | INFO     | ready for new job
[2026-03-26 21:14:04] 2026-03-26 20:12:59,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 21:14:04] 2026-03-26 20:12:59,559 | INFO     | **************************************
[2026-03-26 21:14:04] 2026-03-26 20:12:59,560 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 21:14:04] 2026-03-26 20:12:59,560 | INFO     | **************************************
[2026-03-26 21:14:04] 2026-03-26 20:12:59,560 | INFO     | 
[2026-03-26 21:14:04] 2026-03-26 20:12:59,561 | INFO     | pilot is running in a VM
[2026-03-26 21:14:04] 2026-03-26 20:12:59,561 | INFO     | architecture information:
[2026-03-26 21:14:04] 2026-03-26 20:12:59,561 | INFO     | executing command: cat /etc/os-release
[2026-03-26 21:14:04] 2026-03-26 20:12:59,682 | INFO     | cat /etc/os-release:
[2026-03-26 21:14:04] NAME="CentOS Linux"
[2026-03-26 21:14:04] VERSION="7 (Core)"
[2026-03-26 21:14:04] ID="centos"
[2026-03-26 21:14:04] ID_LIKE="rhel fedora"
[2026-03-26 21:14:04] VERSION_ID="7"
[2026-03-26 21:14:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 21:14:04] ANSI_COLOR="0;31"
[2026-03-26 21:14:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 21:14:04] HOME_URL="https://www.centos.org/"
[2026-03-26 21:14:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 21:14:04] 
[2026-03-26 21:14:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 21:14:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 21:14:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 21:14:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 21:14:04] 
[2026-03-26 21:14:04] 2026-03-26 20:12:59,683 | INFO     | **************************************
[2026-03-26 21:14:04] 2026-03-26 20:13:00,186 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2026-03-26 21:14:04] 2026-03-26 20:13:00,426 | INFO     | sufficient remaining disk space (497064869888 B)
[2026-03-26 21:14:04] 2026-03-26 20:13:00,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 21:14:04] 2026-03-26 20:13:00,426 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 21:14:04] 2026-03-26 20:13:00,426 | INFO     | update_server=False
[2026-03-26 21:14:04] 2026-03-26 20:13:00,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 21:14:04] 2026-03-26 20:13:00,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 21:14:04] 2026-03-26 20:13:00,427 | INFO     | aborting loop
[2026-03-26 21:14:04] 2026-03-26 20:13:00,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 21:14:04] 2026-03-26 20:13:00,599 | INFO     | all data control threads have been joined
[2026-03-26 21:14:04] 2026-03-26 20:13:01,432 | INFO     | [job] retrieve thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:01,433 | INFO     | [job] job monitor thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:01,565 | INFO     | [data] copytool_in thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:01,605 | INFO     | [data] control thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:01,617 | INFO     | [payload] validate_post thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:01,640 | INFO     | [payload] failed_post thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:01,689 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:01,793 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:01,824 | INFO     | all payload control threads have been joined
[2026-03-26 21:14:04] 2026-03-26 20:13:01,841 | INFO     | [job] validate thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:01,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 21:14:04] 2026-03-26 20:13:01,909 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:02,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 21:14:04] 2026-03-26 20:13:02,116 | INFO     | all job control threads have been joined
[2026-03-26 21:14:04] 2026-03-26 20:13:02,516 | INFO     | [data] copytool_out thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:02,578 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:02,830 | INFO     | [payload] control thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:03,067 | INFO     | [job] queue monitor thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:03,122 | INFO     | [job] control thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:05,919 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 21:14:04] 2026-03-26 20:13:29,133 | INFO     | PID=1170 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-26 21:14:04] 2026-03-26 20:13:29,134 | INFO     | .. there are 9 such processes running
[2026-03-26 21:14:04] 2026-03-26 20:13:29,135 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 21:14:04] 2026-03-26 20:13:29,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 21:14:04] 2026-03-26 20:13:29,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 21:14:04] 2026-03-26 20:13:53,454 | INFO     | [monitor] cgroup control has ended
[2026-03-26 21:14:04] 2026-03-26 20:13:54,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233440048960)>', '<ExcThread(monitor, started 140232494151424)>']
[2026-03-26 21:14:04] 2026-03-26 20:13:55,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 21:14:04] 2026-03-26 20:13:55,291 | INFO     | [monitor] control thread has ended
[2026-03-26 21:14:04] 2026-03-26 20:13:59,439 | INFO     | all workflow threads have been joined
[2026-03-26 21:14:04] 2026-03-26 20:13:59,439 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 21:14:04] 2026-03-26 20:13:59,440 | INFO     | traces error code: 0
[2026-03-26 21:14:04] 2026-03-26 20:13:59,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 21:14:04] 2026-03-26 20:13:59,713 [wrapper] ==== pilot stdout END ====
[2026-03-26 21:14:04] 2026-03-26 20:13:59,804 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 21:14:04] 2026-03-26 20:13:59,913 [wrapper] pilotpid: 1170
[2026-03-26 21:14:04] 2026-03-26 20:14:00,020 [wrapper] Pilot exit status: 0
[2026-03-26 21:14:04] 2026-03-26 20:14:00,456 [wrapper] pandaids: 7057144992
[2026-03-26 21:14:04] 2026-03-26 20:14:01,375 [wrapper] cleanup supervisor_pilot 13970 1171
[2026-03-26 21:14:04] 2026-03-26 20:14:01,439 [wrapper] Test setup, not cleaning
[2026-03-26 21:14:04] 2026-03-26 20:14:01,513 [wrapper] apfmon messages muted
[2026-03-26 21:14:04] 2026-03-26 20:14:01,585 [wrapper] ==== wrapper stdout END ====
[2026-03-26 21:14:04] 2026-03-26 20:14:01,680 [wrapper] ==== wrapper stderr END ====
[2026-03-26 21:14:04]  *** Error codes and diagnostics ***
[2026-03-26 21:14:04]     "exeErrorCode": 0,
[2026-03-26 21:14:04]     "exeErrorDiag": "",
[2026-03-26 21:14:04]     "pilotErrorCode": 0,
[2026-03-26 21:14:04]     "pilotErrorDiag": "",
[2026-03-26 21:14:04]  *** Listing of results directory ***
[2026-03-26 21:14:04] total 492568
[2026-03-26 21:14:04] -rwx------. 1 boinc boinc     36322 Mar 17 07:07 runpilot2-wrapper.sh
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc    585013 Mar 17 07:08 pilot3.tar.gz
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc      5111 Mar 17 07:10 queuedata.json
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc       100 Mar 26 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 21:14:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar 26 13:08 run_atlas
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc       105 Mar 26 13:08 job.xml
[2026-03-26 21:14:04] -rw-r--r--. 2 boinc boinc 257710816 Mar 26 13:08 EVNT.49125101._000001.pool.root.1
[2026-03-26 21:14:04] -rw-r--r--. 2 boinc boinc     15845 Mar 26 13:08 start_atlas.sh
[2026-03-26 21:14:04] drwxrwx--x. 2 boinc boinc        68 Mar 26 13:08 shared
[2026-03-26 21:14:04] -rw-r--r--. 2 boinc boinc    597508 Mar 26 13:08 input.tar.gz
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc      6392 Mar 26 13:08 init_data.xml
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc         0 Mar 26 13:08 boinc_lockfile
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc      2560 Mar 26 13:08 pandaJob.out
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc       415 Mar 26 13:12 workernode_map.json
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc   1012192 Mar 26 13:13 agis_schedconf.cvmfs.json
[2026-03-26 21:14:04] drwx------. 5 boinc boinc      4096 Mar 26 13:13 pilot3
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc 233485330 Mar 26 21:11 HITS.49190944._000002.pool.root.1
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc       532 Mar 26 21:11 boinc_task_state.xml
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc      1020 Mar 26 21:12 memory_monitor_summary.json
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc   1511579 Mar 26 21:12 agis_ddmendpoints.agis.ALL.json
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc    651738 Mar 26 21:12 log.49190944._000002.job.log.tgz.1
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc      6302 Mar 26 21:12 heartbeat.json
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc        95 Mar 26 21:13 pilot_heartbeat.json
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc        29 Mar 26 21:13 wrapper_checkpoint.txt
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc      8192 Mar 26 21:13 boinc_mmap_file
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc      4880 Mar 26 21:13 pilotlog.txt
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc   3979379 Mar 26 21:14 log.49190944._000002.job.log.1
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc       357 Mar 26 21:14 output.list
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc       620 Mar 26 21:14 runtime_log
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc   4648960 Mar 26 21:14 result.tar.gz
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc      8832 Mar 26 21:14 runtime_log.err
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc       658 Mar 26 21:14 2TSKDmNlcM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMvwLDmNx5fOo.diag
[2026-03-26 21:14:04] -rw-r--r--. 1 boinc boinc     20947 Mar 26 21:14 stderr.txt
[2026-03-26 21:14:04] HITS file was successfully produced:
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc 233485330 Mar 26 21:11 shared/HITS.pool.root.1
[2026-03-26 21:14:04]  *** Contents of shared directory: ***
[2026-03-26 21:14:04] total 484828
[2026-03-26 21:14:04] -rw-r--r--. 2 boinc boinc 257710816 Mar 26 13:08 ATLAS.root_0
[2026-03-26 21:14:04] -rw-r--r--. 2 boinc boinc     15845 Mar 26 13:08 start_atlas.sh
[2026-03-26 21:14:04] -rw-r--r--. 2 boinc boinc    597508 Mar 26 13:08 input.tar.gz
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc 233485330 Mar 26 21:11 HITS.pool.root.1
[2026-03-26 21:14:04] -rw-------. 1 boinc boinc   4648960 Mar 26 21:14 result.tar.gz
21:14:06 (29773): run_atlas exited; CPU time 108889.993544
21:14:06 (29773): called boinc_finish(0)

</stderr_txt>
]]>

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