Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:46:03 (4003092): wrapper (7.7.26015): starting
17:46:03 (4003092): wrapper: running run_atlas (--nthreads 12)
[2026-03-25 17:46:03] Arguments: --nthreads 12
[2026-03-25 17:46:03] Threads: 12
[2026-03-25 17:46:03] Checking for CVMFS
[2026-03-25 17:46:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 17:46:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 17:46:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 17:46:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 17:46:04] 2.11.0.0 1967501 1013 82964 157691 0 121 6091352 6144000 4059 130560 0 7072092 99.998 38821 535 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-25 17:46:04] CVMFS is ok
[2026-03-25 17:46:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 17:46:04] Checking for apptainer binary...
[2026-03-25 17:46:04] apptainer is not installed, using version from CVMFS
[2026-03-25 17:46:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 17:46:04] radiat0r
[2026-03-25 17:46:04] apptainer works
[2026-03-25 17:46:04] Set ATHENA_PROC_NUMBER=12
[2026-03-25 17:46:04] Set ATHENA_CORE_NUMBER=12
[2026-03-25 17:46:04] Starting ATLAS job with PandaID=7057147272
[2026-03-25 17:46:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 19:20:51]  *** The last 200 lines of the pilot log: ***
[2026-03-25 19:20:51]  filetype=log
[2026-03-25 19:20:51]  guid=7e7c8a13-2b5d-4de8-9664-ee568dda48c6
[2026-03-25 19:20:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-25 19:20:51]  is_altstaged=None
[2026-03-25 19:20:51]  is_tar=False
[2026-03-25 19:20:51]  lfn=log.49191052._000019.job.log.tgz.1
[2026-03-25 19:20:51]  mtime=0
[2026-03-25 19:20:51]  protocol_id=None
[2026-03-25 19:20:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-25 19:20:51]  replicas=None
[2026-03-25 19:20:51]  scope=mc23_13p6TeV
[2026-03-25 19:20:51]  status=None
[2026-03-25 19:20:51]  status_code=0
[2026-03-25 19:20:51]  storage_token=
[2026-03-25 19:20:51]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-7057147272/log.49191052._000019.job.log.tgz.1
[2026-03-25 19:20:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/3f/log.49191052._000019.job.log.tgz.1
[2026-03-25 19:20:51]  workdir=None
[2026-03-25 19:20:51] ]
[2026-03-25 19:20:51] 2026-03-25 19:20:15,723 | INFO     | transferring file log.49191052._000019.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-7057147272/log.49191052._000019.job.log.tgz.1 to /var/lib/boinc/slots
[2026-03-25 19:20:51] 2026-03-25 19:20:15,723 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-7057147272/log.49191052._000019.job.log.tgz.1 /var/lib/boinc/slots/19/log.49191052._000019.j
[2026-03-25 19:20:51] 2026-03-25 19:20:15,743 | INFO     | adding to output.list: log.49191052._000019.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/3f/log.49191052._000019.job.log.tg
[2026-03-25 19:20:51] 2026-03-25 19:20:15,744 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-25 19:20:51] 2026-03-25 19:20:15,744 | INFO     | summary of transferred files:
[2026-03-25 19:20:51] 2026-03-25 19:20:15,744 | INFO     |  -- lfn=log.49191052._000019.job.log.tgz.1, status_code=0, status=transferred
[2026-03-25 19:20:51] 2026-03-25 19:20:15,744 | INFO     | stage-out finished correctly
[2026-03-25 19:20:51] 2026-03-25 19:20:15,883 | INFO     | time since job start (5636s) is within the limit (345600.0s)
[2026-03-25 19:20:51] 2026-03-25 19:20:15,982 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-25 19:20:51] 2026-03-25 19:20:16,574 | INFO     | monitor loop #388: job 0:7057147272 is in state 'finished'
[2026-03-25 19:20:51] 2026-03-25 19:20:16,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-25 19:20:51] 2026-03-25 19:20:17,660 | INFO     | job 7057147272 has state=finished
[2026-03-25 19:20:51] 2026-03-25 19:20:17,660 | INFO     | preparing for final server update for job 7057147272 in state='finished'
[2026-03-25 19:20:51] 2026-03-25 19:20:17,660 | INFO     | reading metadata from: /var/lib/boinc/slots/19/PanDA_Pilot-7057147272/jobReport.json
[2026-03-25 19:20:51] 2026-03-25 19:20:17,664 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/19/workernode_map.json
[2026-03-25 19:20:51] 2026-03-25 19:20:17,665 | INFO     | this job has now completed (state=finished)
[2026-03-25 19:20:51] 2026-03-25 19:20:17,665 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 19:20:51] 2026-03-25 19:20:17,665 | INFO     | log transfer has been attempted: DONE
[2026-03-25 19:20:51] 2026-03-25 19:20:17,665 | INFO     | job 7057147272 has finished - writing final server update
[2026-03-25 19:20:51] 2026-03-25 19:20:17,665 | INFO     | total number of processed events: 400 (read)
[2026-03-25 19:20:51] 2026-03-25 19:20:17,745 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-7057147272/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 19:20:51] 2026-03-25 19:20:17,746 | INFO     | extracted standard info from prmon json
[2026-03-25 19:20:51] 2026-03-25 19:20:17,746 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 19:20:51] 2026-03-25 19:20:17,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 19:20:51] 2026-03-25 19:20:17,747 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 19:20:51] 2026-03-25 19:20:17,747 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 19:20:51] 2026-03-25 19:20:17,749 | INFO     | fitting pss+swap vs Time
[2026-03-25 19:20:51] 2026-03-25 19:20:17,749 | INFO     | sum of square deviations: 190403570.0
[2026-03-25 19:20:51] 2026-03-25 19:20:17,750 | INFO     | sum of deviations: 1389298485.0
[2026-03-25 19:20:51] 2026-03-25 19:20:17,750 | INFO     | mean x: 1774463671.0
[2026-03-25 19:20:51] 2026-03-25 19:20:17,750 | INFO     | mean y: 2690829.3647058825
[2026-03-25 19:20:51] 2026-03-25 19:20:17,751 | INFO     | intersect: -12944858892.564554
[2026-03-25 19:20:51] 2026-03-25 19:20:17,751 | INFO     | chi2: 0.0036635945396236817
[2026-03-25 19:20:51] 2026-03-25 19:20:17,751 | INFO     | current memory leak: 7.30 B/s (using 85 data points, chi2=0.00)
[2026-03-25 19:20:51] 2026-03-25 19:20:17,752 | INFO     | could have reported an average CPU frequency of 2119 MHz (7 samples)
[2026-03-25 19:20:51] 2026-03-25 19:20:17,752 | INFO     | ..............................
[2026-03-25 19:20:51] 2026-03-25 19:20:17,752 | INFO     | . Timing measurements:
[2026-03-25 19:20:51] 2026-03-25 19:20:17,752 | INFO     | . get job = 0 s
[2026-03-25 19:20:51] 2026-03-25 19:20:17,752 | INFO     | . initial setup = 5 s
[2026-03-25 19:20:51] 2026-03-25 19:20:17,753 | INFO     | . payload setup = 8 s
[2026-03-25 19:20:51] 2026-03-25 19:20:17,753 | INFO     | . stage-in = 0 s
[2026-03-25 19:20:51] 2026-03-25 19:20:17,753 | INFO     | . payload execution = 5611 s
[2026-03-25 19:20:51] 2026-03-25 19:20:17,753 | INFO     | . stage-out = 0 s
[2026-03-25 19:20:51] 2026-03-25 19:20:17,753 | INFO     | . log creation = 0 s
[2026-03-25 19:20:51] 2026-03-25 19:20:17,753 | INFO     | ..............................
[2026-03-25 19:20:51] 2026-03-25 19:20:18,010 | INFO     | PID=4031468 has CPU usage=17.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-25 19:20:51] 2026-03-25 19:20:18,010 | INFO     | .. there are 17 such processes running
[2026-03-25 19:20:51] 2026-03-25 19:20:18,077 | INFO     | 
[2026-03-25 19:20:51] 2026-03-25 19:20:18,077 | INFO     | job summary report
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | --------------------------------------------------
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | PanDA job id: 7057147272
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | task id: 49191052
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | errors: (none)
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | pilot state: finished 
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | transexitcode: 0
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | exeerrorcode: 0
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | exeerrordiag: 
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | exitcode: 0
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | exitmsg: OK
[2026-03-25 19:20:51] 2026-03-25 19:20:18,078 | INFO     | cpuconsumptiontime: 61660 s
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | nevents: 400
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | neventsw: 0
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | pid: 4096945
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | pgrp: 4096945
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | corecount: 12
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | event service: False
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | sizes: {0: 2280283, 11: 2280283, 5623: 2307056, 5625: 2316112, 5627: 2316250}
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | --------------------------------------------------
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | 
[2026-03-25 19:20:51] 2026-03-25 19:20:18,079 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-03-25 19:20:51] 2026-03-25 19:20:18,110 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,113 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,113 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,113 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,114 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 19:20:51] 2026-03-25 19:20:18,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,115 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 19:20:51] 2026-03-25 19:20:18,115 | INFO     | job 7057147272 has completed (purged errors)
[2026-03-25 19:20:51] 2026-03-25 19:20:18,115 | INFO     | overall cleanup function is called
[2026-03-25 19:20:51] 2026-03-25 19:20:19,122 | INFO     | --- collectZombieJob: --- 10, [4096945]
[2026-03-25 19:20:51] 2026-03-25 19:20:19,122 | INFO     | zombie collector waiting for pid 4096945
[2026-03-25 19:20:51] 2026-03-25 19:20:19,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 19:20:51] 2026-03-25 19:20:19,123 | INFO     | collected zombie processes
[2026-03-25 19:20:51] 2026-03-25 19:20:19,123 | INFO     | will attempt to kill all subprocesses of pid=4096945
[2026-03-25 19:20:51] 2026-03-25 19:20:19,989 | INFO     | process IDs to be killed: [4096945] (in reverse order)
[2026-03-25 19:20:51] 2026-03-25 19:20:20,267 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 19:20:51] 2026-03-25 19:20:20,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 19:20:51] 2026-03-25 19:20:20,300 | INFO     | did not find any defunct processes belonging to 4096945
[2026-03-25 19:20:51] 2026-03-25 19:20:20,331 | INFO     | did not find any defunct processes belonging to 4096945
[2026-03-25 19:20:51] 2026-03-25 19:20:20,331 | INFO     | ready for new job
[2026-03-25 19:20:51] 2026-03-25 19:20:20,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 19:20:51] 2026-03-25 19:20:20,334 | INFO     | **************************************
[2026-03-25 19:20:51] 2026-03-25 19:20:20,334 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 19:20:51] 2026-03-25 19:20:20,334 | INFO     | **************************************
[2026-03-25 19:20:51] 2026-03-25 19:20:20,335 | INFO     | 
[2026-03-25 19:20:51] 2026-03-25 19:20:20,373 | INFO     | architecture information:
[2026-03-25 19:20:51] 2026-03-25 19:20:20,374 | INFO     | executing command: cat /etc/os-release
[2026-03-25 19:20:51] 2026-03-25 19:20:20,395 | INFO     | cat /etc/os-release:
[2026-03-25 19:20:51] NAME="CentOS Linux"
[2026-03-25 19:20:51] VERSION="7 (Core)"
[2026-03-25 19:20:51] ID="centos"
[2026-03-25 19:20:51] ID_LIKE="rhel fedora"
[2026-03-25 19:20:51] VERSION_ID="7"
[2026-03-25 19:20:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 19:20:51] ANSI_COLOR="0;31"
[2026-03-25 19:20:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 19:20:51] HOME_URL="https://www.centos.org/"
[2026-03-25 19:20:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 19:20:51] 
[2026-03-25 19:20:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 19:20:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 19:20:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 19:20:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 19:20:51] 
[2026-03-25 19:20:51] 2026-03-25 19:20:20,396 | INFO     | **************************************
[2026-03-25 19:20:51] 2026-03-25 19:20:20,899 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-03-25 19:20:51] 2026-03-25 19:20:20,925 | INFO     | sufficient remaining disk space (1711971237888 B)
[2026-03-25 19:20:51] 2026-03-25 19:20:20,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 19:20:51] 2026-03-25 19:20:20,926 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 19:20:51] 2026-03-25 19:20:20,926 | INFO     | update_server=False
[2026-03-25 19:20:51] 2026-03-25 19:20:20,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 19:20:51] 2026-03-25 19:20:20,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 19:20:51] 2026-03-25 19:20:20,927 | INFO     | aborting loop
[2026-03-25 19:20:51] 2026-03-25 19:20:21,163 | INFO     | all data control threads have been joined
[2026-03-25 19:20:51] 2026-03-25 19:20:21,302 | INFO     | all job control threads have been joined
[2026-03-25 19:20:51] 2026-03-25 19:20:21,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 19:20:51] 2026-03-25 19:20:21,666 | INFO     | all payload control threads have been joined
[2026-03-25 19:20:51] 2026-03-25 19:20:21,931 | INFO     | [job] retrieve thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:21,932 | INFO     | [job] job monitor thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:21,966 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:22,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 19:20:51] 2026-03-25 19:20:22,084 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:22,166 | INFO     | [data] control thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:22,265 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:22,307 | INFO     | [job] control thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:22,386 | INFO     | [payload] failed_post thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:22,406 | INFO     | [data] copytool_in thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:22,667 | INFO     | [payload] control thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:22,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 19:20:51] 2026-03-25 19:20:22,974 | INFO     | [payload] validate_post thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:23,278 | INFO     | [job] validate thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:23,323 | INFO     | [data] copytool_out thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:23,354 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:23,862 | INFO     | [job] queue monitor thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:26,086 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 19:20:51] 2026-03-25 19:20:27,737 | INFO     | [monitor] cgroup control has ended
[2026-03-25 19:20:51] 2026-03-25 19:20:27,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330941744960)>', '<ExcThread(monitor, started 140330649241344)>']
[2026-03-25 19:20:51] 2026-03-25 19:20:32,833 | INFO     | all workflow threads have been joined
[2026-03-25 19:20:51] 2026-03-25 19:20:32,833 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 19:20:51] 2026-03-25 19:20:32,834 | INFO     | traces error code: 0
[2026-03-25 19:20:51] 2026-03-25 19:20:32,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 19:20:51] 2026-03-25 19:20:51,095 | INFO     | PID=4031468 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 19:20:51] 2026-03-25 19:20:51,095 | INFO     | .. there are 17 such processes running
[2026-03-25 19:20:51] 2026-03-25 19:20:51,096 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 19:20:51] 2026-03-25 19:20:51,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 19:20:51] 2026-03-25 19:20:51,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 19:20:51] 2026-03-25 19:20:51,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 19:20:51] 2026-03-25 19:20:51,097 | INFO     | [monitor] control thread has ended
[2026-03-25 19:20:51] 2026-03-25 19:20:51,318 [wrapper] ==== pilot stdout END ====
[2026-03-25 19:20:51] 2026-03-25 19:20:51,325 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 19:20:51] 2026-03-25 19:20:51,328 [wrapper] pilotpid: 4031468
[2026-03-25 19:20:51] 2026-03-25 19:20:51,331 [wrapper] Pilot exit status: 0
[2026-03-25 19:20:51] 2026-03-25 19:20:51,344 [wrapper] pandaids: 7057147272
[2026-03-25 19:20:51] 2026-03-25 19:20:51,525 [wrapper] cleanup supervisor_pilot   38902 4031469
[2026-03-25 19:20:51] 2026-03-25 19:20:51,529 [wrapper] Test setup, not cleaning
[2026-03-25 19:20:51] 2026-03-25 19:20:51,532 [wrapper] apfmon messages muted
[2026-03-25 19:20:51] 2026-03-25 19:20:51,536 [wrapper] ==== wrapper stdout END ====
[2026-03-25 19:20:51] 2026-03-25 19:20:51,539 [wrapper] ==== wrapper stderr END ====
[2026-03-25 19:20:51]  *** Error codes and diagnostics ***
[2026-03-25 19:20:51]     "exeErrorCode": 0,
[2026-03-25 19:20:51]     "exeErrorDiag": "",
[2026-03-25 19:20:51]     "pilotErrorCode": 0,
[2026-03-25 19:20:51]     "pilotErrorDiag": "",
[2026-03-25 19:20:51]  *** Listing of results directory ***
[2026-03-25 19:20:51] total 458432
[2026-03-25 19:20:51] -rwx------ 1 boinc boinc     36322 Mar 17 09:47 runpilot2-wrapper.sh
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc      5111 Mar 17 09:49 queuedata.json
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc    585013 Mar 17 09:50 pilot3.tar.gz
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc       100 Mar 25 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 19:20:51] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 17:46 run_atlas
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc       105 Mar 25 17:46 job.xml
[2026-03-25 19:20:51] -rw-r--r-- 2 boinc boinc 249704200 Mar 25 17:46 EVNT.49125548._000001.pool.root.1
[2026-03-25 19:20:51] -rw-r--r-- 2 boinc boinc     15845 Mar 25 17:46 start_atlas.sh
[2026-03-25 19:20:51] drwxrwx--x 2 boinc boinc      4096 Mar 25 17:46 shared
[2026-03-25 19:20:51] -rw-r--r-- 2 boinc boinc    597530 Mar 25 17:46 input.tar.gz
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc      9415 Mar 25 17:46 init_data.xml
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc         0 Mar 25 17:46 boinc_setup_complete
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc         0 Mar 25 17:46 boinc_lockfile
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc      2600 Mar 25 17:46 pandaJob.out
[2026-03-25 19:20:51] -rw------- 1 boinc boinc   1012131 Mar 25 17:46 agis_schedconf.cvmfs.json
[2026-03-25 19:20:51] -rw------- 1 boinc boinc   1511579 Mar 25 17:46 agis_ddmendpoints.agis.ALL.json
[2026-03-25 19:20:51] -rw------- 1 boinc boinc       421 Mar 25 17:46 workernode_map.json
[2026-03-25 19:20:51] drwx------ 5 boinc boinc      4096 Mar 25 17:46 pilot3
[2026-03-25 19:20:51] -rw------- 1 boinc boinc 213377912 Mar 25 19:19 HITS.49191052._000019.pool.root.1
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc       529 Mar 25 19:19 boinc_task_state.xml
[2026-03-25 19:20:51] -rw------- 1 boinc boinc      1027 Mar 25 19:20 memory_monitor_summary.json
[2026-03-25 19:20:51] -rw------- 1 boinc boinc    407712 Mar 25 19:20 log.49191052._000019.job.log.tgz.1
[2026-03-25 19:20:51] -rw------- 1 boinc boinc      6270 Mar 25 19:20 heartbeat.json
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc      8192 Mar 25 19:20 boinc_mmap_file
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc        27 Mar 25 19:20 wrapper_checkpoint.txt
[2026-03-25 19:20:51] -rw------- 1 boinc boinc       823 Mar 25 19:20 pilotlog.txt
[2026-03-25 19:20:51] -rw------- 1 boinc boinc        95 Mar 25 19:20 pilot_heartbeat.json
[2026-03-25 19:20:51] -rw------- 1 boinc boinc    795597 Mar 25 19:20 log.49191052._000019.job.log.1
[2026-03-25 19:20:51] -rw------- 1 boinc boinc       357 Mar 25 19:20 output.list
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc       620 Mar 25 19:20 runtime_log
[2026-03-25 19:20:51] -rw------- 1 boinc boinc   1218560 Mar 25 19:20 result.tar.gz
[2026-03-25 19:20:51] -rw------- 1 boinc boinc       643 Mar 25 19:20 WOLNDmUCgM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmf9wLDmjBk7um.diag
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc      8787 Mar 25 19:20 runtime_log.err
[2026-03-25 19:20:51] -rw-r--r-- 1 boinc boinc     21072 Mar 25 19:20 stderr.txt
[2026-03-25 19:20:51] HITS file was successfully produced:
[2026-03-25 19:20:51] -rw------- 1 boinc boinc 213377912 Mar 25 19:19 shared/HITS.pool.root.1
[2026-03-25 19:20:51]  *** Contents of shared directory: ***
[2026-03-25 19:20:51] total 454032
[2026-03-25 19:20:51] -rw-r--r-- 2 boinc boinc 249704200 Mar 25 17:46 ATLAS.root_0
[2026-03-25 19:20:51] -rw-r--r-- 2 boinc boinc     15845 Mar 25 17:46 start_atlas.sh
[2026-03-25 19:20:51] -rw-r--r-- 2 boinc boinc    597530 Mar 25 17:46 input.tar.gz
[2026-03-25 19:20:51] -rw------- 1 boinc boinc 213377912 Mar 25 19:19 HITS.pool.root.1
[2026-03-25 19:20:51] -rw------- 1 boinc boinc   1218560 Mar 25 19:20 result.tar.gz
19:20:53 (4003092): run_atlas exited; CPU time 62079.061062
19:20:53 (4003092): called boinc_finish(0)

</stderr_txt>
]]>

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