Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:24:45 (2497): wrapper (7.7.26015): starting
13:24:45 (2497): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 13:24:45] Arguments: --nthreads 8
[2026-03-25 13:24:45] Threads: 8
[2026-03-25 13:24:45] Checking for CVMFS
[2026-03-25 13:24:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 13:24:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 13:24:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 13:24:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 13:24:46] 2.11.2.0 13467 96919 73824 157691 2 50 19323310 20275200 1 130560 0 27170163 99.909 6090647 23008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-25 13:24:46] CVMFS is ok
[2026-03-25 13:24:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 13:24:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 13:24:46] Further information can be found at the LHC@home message board.
[2026-03-25 13:24:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 13:24:46] Checking for apptainer binary...
[2026-03-25 13:24:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 13:24:46] Running /usr/bin/apptainer --version
[2026-03-25 13:24:46] apptainer version 1.3.2-1.el7
[2026-03-25 13:24:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 13:24:47] c-204-33.aglt2.org
[2026-03-25 13:24:47] apptainer works
[2026-03-25 13:24:47] Set ATHENA_PROC_NUMBER=8
[2026-03-25 13:24:47] Set ATHENA_CORE_NUMBER=8
[2026-03-25 13:24:47] Starting ATLAS job with PandaID=7057157742
[2026-03-25 13:24:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:48:29 (17112): wrapper (7.7.26015): starting
16:48:29 (17112): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 16:48:29] Arguments: --nthreads 8
[2026-03-25 16:48:29] Threads: 8
[2026-03-25 16:48:29] This job has been restarted, cleaning up previous attempt
[2026-03-25 16:48:29] Checking for CVMFS
[2026-03-25 16:48:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 16:48:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 16:48:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 16:48:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 16:48:30] 2.11.2.0 13467 97123 73580 157695 3 31 19733749 20275201 1 130560 0 27238636 99.909 6096465 23016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-25 16:48:30] CVMFS is ok
[2026-03-25 16:48:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 16:48:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 16:48:30] Further information can be found at the LHC@home message board.
[2026-03-25 16:48:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 16:48:30] Checking for apptainer binary...
[2026-03-25 16:48:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 16:48:30] Running /usr/bin/apptainer --version
[2026-03-25 16:48:31] apptainer version 1.3.2-1.el7
[2026-03-25 16:48:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 16:48:32] c-204-33.aglt2.org
[2026-03-25 16:48:32] apptainer works
[2026-03-25 16:48:32] Set ATHENA_PROC_NUMBER=8
[2026-03-25 16:48:32] Set ATHENA_CORE_NUMBER=8
[2026-03-25 16:48:32] Starting ATLAS job with PandaID=7057157742
[2026-03-25 16:48:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 21:41:28]  *** The last 200 lines of the pilot log: ***
[2026-03-25 21:41:28] 2026-03-26 01:40:58,956 | INFO     | stage-out finished correctly
[2026-03-25 21:41:28] 2026-03-26 01:41:00,134 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-25 21:41:28] 2026-03-26 01:41:00,159 | INFO     | time since job start (17528s) is within the limit (345600.0s)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,220 | INFO     | job 7057157742 has state=finished
[2026-03-25 21:41:28] 2026-03-26 01:41:00,220 | INFO     | preparing for final server update for job 7057157742 in state='finished'
[2026-03-25 21:41:28] 2026-03-26 01:41:00,220 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7057157742/jobReport.json
[2026-03-25 21:41:28] 2026-03-26 01:41:00,224 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-25 21:41:28] 2026-03-26 01:41:00,224 | INFO     | this job has now completed (state=finished)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,224 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,225 | INFO     | log transfer has been attempted: DONE
[2026-03-25 21:41:28] 2026-03-26 01:41:00,225 | INFO     | job 7057157742 has finished - writing final server update
[2026-03-25 21:41:28] 2026-03-26 01:41:00,225 | INFO     | total number of processed events: 400 (read)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,227 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7057157742/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,228 | INFO     | extracted standard info from prmon json
[2026-03-25 21:41:28] 2026-03-26 01:41:00,228 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 21:41:28] 2026-03-26 01:41:00,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 21:41:28] 2026-03-26 01:41:00,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 21:41:28] 2026-03-26 01:41:00,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 21:41:28] 2026-03-26 01:41:00,235 | INFO     | fitting pss+swap vs Time
[2026-03-25 21:41:28] 2026-03-26 01:41:00,235 | INFO     | sum of square deviations: 7330227620.871075
[2026-03-25 21:41:28] 2026-03-26 01:41:00,238 | INFO     | sum of deviations: 19360962159.881516
[2026-03-25 21:41:28] 2026-03-26 01:41:00,238 | INFO     | mean x: 1774480488.0627177
[2026-03-25 21:41:28] 2026-03-26 01:41:00,238 | INFO     | mean y: 2511005.895470383
[2026-03-25 21:41:28] 2026-03-26 01:41:00,238 | INFO     | intersect: -4684335209.495009
[2026-03-25 21:41:28] 2026-03-26 01:41:00,239 | INFO     | chi2: 1.6052968028639016
[2026-03-25 21:41:28] 2026-03-26 01:41:00,239 | INFO     | sum of square deviations: 6953751633.351052
[2026-03-25 21:41:28] 2026-03-26 01:41:00,241 | INFO     | sum of deviations: 18923631826.97871
[2026-03-25 21:41:28] 2026-03-26 01:41:00,241 | INFO     | mean x: 1774480335.56383
[2026-03-25 21:41:28] 2026-03-26 01:41:00,241 | INFO     | mean y: 2510828.723404255
[2026-03-25 21:41:28] 2026-03-26 01:41:00,241 | INFO     | intersect: -4826481393.744189
[2026-03-25 21:41:28] 2026-03-26 01:41:00,242 | INFO     | chi2: 1.6057331945304565
[2026-03-25 21:41:28] 2026-03-26 01:41:00,242 | INFO     | current chi2=1.6057331945304565 (change=-0.02718448487384454 %)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,242 | INFO     | right removable region: 281
[2026-03-25 21:41:28] 2026-03-26 01:41:00,242 | INFO     | sum of square deviations: 6953740653.351052
[2026-03-25 21:41:28] 2026-03-26 01:41:00,245 | INFO     | sum of deviations: -24012668584.585125
[2026-03-25 21:41:28] 2026-03-26 01:41:00,245 | INFO     | mean x: 1774480640.56383
[2026-03-25 21:41:28] 2026-03-26 01:41:00,245 | INFO     | mean y: 2528429.7269503544
[2026-03-25 21:41:28] 2026-03-26 01:41:00,245 | INFO     | intersect: 6130167876.718337
[2026-03-25 21:41:28] 2026-03-26 01:41:00,245 | INFO     | chi2: 0.15796902147228034
[2026-03-25 21:41:28] 2026-03-26 01:41:00,246 | INFO     | current chi2=0.15796902147228034 (change=90.15951310745412 %)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,246 | INFO     | sum of square deviations: 6590370210.830376
[2026-03-25 21:41:28] 2026-03-26 01:41:00,248 | INFO     | sum of deviations: -21247475949.090263
[2026-03-25 21:41:28] 2026-03-26 01:41:00,248 | INFO     | mean x: 1774480793.064982
[2026-03-25 21:41:28] 2026-03-26 01:41:00,248 | INFO     | mean y: 2527245.9494584836
[2026-03-25 21:41:28] 2026-03-26 01:41:00,248 | INFO     | intersect: 5723486276.568207
[2026-03-25 21:41:28] 2026-03-26 01:41:00,249 | INFO     | chi2: 0.14107138686812504
[2026-03-25 21:41:28] 2026-03-26 01:41:00,249 | INFO     | current chi2=0.14107138686812504 (change=10.696802731743464 %)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,249 | INFO     | left removable region: 20
[2026-03-25 21:41:28] 2026-03-26 01:41:00,249 | INFO     | sum of square deviations: 5513032130.758655
[2026-03-25 21:41:28] 2026-03-26 01:41:00,251 | INFO     | sum of deviations: -2848765285.275863
[2026-03-25 21:41:28] 2026-03-26 01:41:00,252 | INFO     | mean x: 1774480915.0689654
[2026-03-25 21:41:28] 2026-03-26 01:41:00,252 | INFO     | mean y: 2518995.3486590036
[2026-03-25 21:41:28] 2026-03-26 01:41:00,252 | INFO     | intersect: 919451730.4273099
[2026-03-25 21:41:28] 2026-03-26 01:41:00,252 | INFO     | chi2: 0.07629626503980506
[2026-03-25 21:41:28] 2026-03-26 01:41:00,252 | INFO     | current memory leak: -0.52 B/s (using 261 data points, chi2=0.08)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,253 | INFO     | could have reported an average CPU frequency of 1779 MHz (13 samples)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,253 | INFO     | ..............................
[2026-03-25 21:41:28] 2026-03-26 01:41:00,253 | INFO     | . Timing measurements:
[2026-03-25 21:41:28] 2026-03-26 01:41:00,253 | INFO     | . get job = 0 s
[2026-03-25 21:41:28] 2026-03-26 01:41:00,253 | INFO     | . initial setup = 2 s
[2026-03-25 21:41:28] 2026-03-26 01:41:00,253 | INFO     | . payload setup = 15 s
[2026-03-25 21:41:28] 2026-03-26 01:41:00,254 | INFO     | . stage-in = 0 s
[2026-03-25 21:41:28] 2026-03-26 01:41:00,254 | INFO     | . payload execution = 17492 s
[2026-03-25 21:41:28] 2026-03-26 01:41:00,254 | INFO     | . stage-out = 2 s
[2026-03-25 21:41:28] 2026-03-26 01:41:00,254 | INFO     | . log creation = 0 s
[2026-03-25 21:41:28] 2026-03-26 01:41:00,254 | INFO     | ..............................
[2026-03-25 21:41:28] 2026-03-26 01:41:00,340 | INFO     | 
[2026-03-25 21:41:28] 2026-03-26 01:41:00,340 | INFO     | job summary report
[2026-03-25 21:41:28] 2026-03-26 01:41:00,340 | INFO     | --------------------------------------------------
[2026-03-25 21:41:28] 2026-03-26 01:41:00,340 | INFO     | PanDA job id: 7057157742
[2026-03-25 21:41:28] 2026-03-26 01:41:00,340 | INFO     | task id: 49181022
[2026-03-25 21:41:28] 2026-03-26 01:41:00,341 | INFO     | errors: (none)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,341 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 21:41:28] 2026-03-26 01:41:00,341 | INFO     | pilot state: finished 
[2026-03-25 21:41:28] 2026-03-26 01:41:00,341 | INFO     | transexitcode: 0
[2026-03-25 21:41:28] 2026-03-26 01:41:00,341 | INFO     | exeerrorcode: 0
[2026-03-25 21:41:28] 2026-03-26 01:41:00,341 | INFO     | exeerrordiag: 
[2026-03-25 21:41:28] 2026-03-26 01:41:00,342 | INFO     | exitcode: 0
[2026-03-25 21:41:28] 2026-03-26 01:41:00,342 | INFO     | exitmsg: OK
[2026-03-25 21:41:28] 2026-03-26 01:41:00,342 | INFO     | cpuconsumptiontime: 128294 s
[2026-03-25 21:41:28] 2026-03-26 01:41:00,342 | INFO     | nevents: 400
[2026-03-25 21:41:28] 2026-03-26 01:41:00,342 | INFO     | neventsw: 0
[2026-03-25 21:41:28] 2026-03-26 01:41:00,342 | INFO     | pid: 23625
[2026-03-25 21:41:28] 2026-03-26 01:41:00,343 | INFO     | pgrp: 23625
[2026-03-25 21:41:28] 2026-03-26 01:41:00,343 | INFO     | corecount: 8
[2026-03-25 21:41:28] 2026-03-26 01:41:00,343 | INFO     | event service: False
[2026-03-25 21:41:28] 2026-03-26 01:41:00,343 | INFO     | sizes: {0: 2279870, 1: 2280331, 11: 2280331, 17512: 2312633, 17515: 2321631, 17517: 2322009}
[2026-03-25 21:41:28] 2026-03-26 01:41:00,343 | INFO     | --------------------------------------------------
[2026-03-25 21:41:28] 2026-03-26 01:41:00,343 | INFO     | 
[2026-03-25 21:41:28] 2026-03-26 01:41:00,344 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-25 21:41:28] 2026-03-26 01:41:00,372 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,376 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,376 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 21:41:28] 2026-03-26 01:41:00,376 | INFO     | job 7057157742 has completed (purged errors)
[2026-03-25 21:41:28] 2026-03-26 01:41:00,377 | INFO     | overall cleanup function is called
[2026-03-25 21:41:28] 2026-03-26 01:41:01,385 | INFO     | --- collectZombieJob: --- 10, [23625]
[2026-03-25 21:41:28] 2026-03-26 01:41:01,385 | INFO     | zombie collector waiting for pid 23625
[2026-03-25 21:41:28] 2026-03-26 01:41:01,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 21:41:28] 2026-03-26 01:41:01,386 | INFO     | collected zombie processes
[2026-03-25 21:41:28] 2026-03-26 01:41:01,386 | INFO     | will attempt to kill all subprocesses of pid=23625
[2026-03-25 21:41:28] 2026-03-26 01:41:01,471 | INFO     | process IDs to be killed: [23625] (in reverse order)
[2026-03-25 21:41:28] 2026-03-26 01:41:01,528 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 21:41:28] 2026-03-26 01:41:01,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 21:41:28] 2026-03-26 01:41:01,532 | INFO     | did not find any defunct processes belonging to 23625
[2026-03-25 21:41:28] 2026-03-26 01:41:01,535 | INFO     | did not find any defunct processes belonging to 23625
[2026-03-25 21:41:28] 2026-03-26 01:41:01,535 | INFO     | ready for new job
[2026-03-25 21:41:28] 2026-03-26 01:41:01,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 21:41:28] 2026-03-26 01:41:01,537 | INFO     | **************************************
[2026-03-25 21:41:28] 2026-03-26 01:41:01,537 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 21:41:28] 2026-03-26 01:41:01,538 | INFO     | **************************************
[2026-03-25 21:41:28] 2026-03-26 01:41:01,538 | INFO     | 
[2026-03-25 21:41:28] 2026-03-26 01:41:01,538 | INFO     | architecture information:
[2026-03-25 21:41:28] 2026-03-26 01:41:01,539 | INFO     | executing command: cat /etc/os-release
[2026-03-25 21:41:28] 2026-03-26 01:41:01,557 | INFO     | cat /etc/os-release:
[2026-03-25 21:41:28] NAME="CentOS Linux"
[2026-03-25 21:41:28] VERSION="7 (Core)"
[2026-03-25 21:41:28] ID="centos"
[2026-03-25 21:41:28] ID_LIKE="rhel fedora"
[2026-03-25 21:41:28] VERSION_ID="7"
[2026-03-25 21:41:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 21:41:28] ANSI_COLOR="0;31"
[2026-03-25 21:41:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 21:41:28] HOME_URL="https://www.centos.org/"
[2026-03-25 21:41:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 21:41:28] 
[2026-03-25 21:41:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 21:41:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 21:41:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 21:41:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 21:41:28] 
[2026-03-25 21:41:28] 2026-03-26 01:41:01,557 | INFO     | **************************************
[2026-03-25 21:41:28] 2026-03-26 01:41:02,061 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-25 21:41:28] 2026-03-26 01:41:02,080 | INFO     | sufficient remaining disk space (18488492032 B)
[2026-03-25 21:41:28] 2026-03-26 01:41:02,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 21:41:28] 2026-03-26 01:41:02,081 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 21:41:28] 2026-03-26 01:41:02,081 | INFO     | update_server=False
[2026-03-25 21:41:28] 2026-03-26 01:41:02,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 21:41:28] 2026-03-26 01:41:02,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 21:41:28] 2026-03-26 01:41:02,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 21:41:28] 2026-03-26 01:41:02,082 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-25 21:41:28] 2026-03-26 01:41:02,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 21:41:28] 2026-03-26 01:41:02,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 21:41:28] 2026-03-26 01:41:02,087 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 21:41:28] 2026-03-26 01:41:02,087 | INFO     | aborting loop
[2026-03-25 21:41:28] 2026-03-26 01:41:02,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 21:41:28] 2026-03-26 01:41:02,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 21:41:28] 2026-03-26 01:41:02,623 | INFO     | all data control threads have been joined
[2026-03-25 21:41:28] 2026-03-26 01:41:02,849 | INFO     | all payload control threads have been joined
[2026-03-25 21:41:28] 2026-03-26 01:41:03,083 | INFO     | [job] retrieve thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:03,091 | INFO     | [job] job monitor thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:03,092 | INFO     | [job] queue monitor thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:03,362 | INFO     | all job control threads have been joined
[2026-03-25 21:41:28] 2026-03-26 01:41:03,624 | INFO     | [data] control thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:03,638 | INFO     | [payload] failed_post thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:03,744 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:03,851 | INFO     | [payload] control thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:03,911 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:03,916 | INFO     | [data] copytool_in thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:03,937 | INFO     | [job] validate thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:04,069 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:04,094 | INFO     | [data] copytool_out thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:04,361 | INFO     | [payload] validate_post thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:04,368 | INFO     | [job] control thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:04,424 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:06,085 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 21:41:28] 2026-03-26 01:41:21,549 | INFO     | [monitor] cgroup control has ended
[2026-03-25 21:41:28] 2026-03-26 01:41:22,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770221082432)>', '<ExcThread(monitor, started 139769627531008)>']
[2026-03-25 21:41:28] 2026-03-26 01:41:23,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 21:41:28] 2026-03-26 01:41:23,189 | INFO     | [monitor] control thread has ended
[2026-03-25 21:41:28] 2026-03-26 01:41:27,682 | INFO     | all workflow threads have been joined
[2026-03-25 21:41:28] 2026-03-26 01:41:27,683 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 21:41:28] 2026-03-26 01:41:27,684 | INFO     | traces error code: 0
[2026-03-25 21:41:28] 2026-03-26 01:41:27,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 21:41:28] 2026-03-26 01:41:27,808 [wrapper] ==== pilot stdout END ====
[2026-03-25 21:41:28] 2026-03-26 01:41:27,812 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 21:41:28] 2026-03-26 01:41:27,817 [wrapper] pilotpid: 21112
[2026-03-25 21:41:28] 2026-03-26 01:41:27,821 [wrapper] Pilot exit status: 0
[2026-03-25 21:41:28] 2026-03-26 01:41:27,838 [wrapper] pandaids: 7057157742 7057157742
[2026-03-25 21:41:28] 2026-03-26 01:41:27,878 [wrapper] cleanup supervisor_pilot  9658 21113
[2026-03-25 21:41:28] 2026-03-26 01:41:27,882 [wrapper] Test setup, not cleaning
[2026-03-25 21:41:28] 2026-03-26 01:41:27,886 [wrapper] apfmon messages muted
[2026-03-25 21:41:28] 2026-03-26 01:41:27,891 [wrapper] ==== wrapper stdout END ====
[2026-03-25 21:41:28] 2026-03-26 01:41:27,895 [wrapper] ==== wrapper stderr END ====
[2026-03-25 21:41:28]  *** Error codes and diagnostics ***
[2026-03-25 21:41:28]     "exeErrorCode": 0,
[2026-03-25 21:41:28]     "exeErrorDiag": "",
[2026-03-25 21:41:28]     "pilotErrorCode": 0,
[2026-03-25 21:41:28]     "pilotErrorDiag": "",
[2026-03-25 21:41:28]  *** Listing of results directory ***
[2026-03-25 21:41:28] total 693484
[2026-03-25 21:41:28] drwx------ 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas    585013 Mar 17 05:43 pilot3.tar.gz
[2026-03-25 21:41:28] -rwx------ 1 boincer umatlas     36322 Mar 17 05:44 runpilot2-wrapper.sh
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas      5111 Mar 17 05:45 queuedata.json
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas       100 Mar 25 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 21:41:28] -rwxr-xr-x 1 boincer umatlas      7986 Mar 25 13:24 run_atlas
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas       105 Mar 25 13:24 job.xml
[2026-03-25 21:41:28] -rw-r--r-- 3 boincer umatlas 239479780 Mar 25 13:24 EVNT.49134304._000006.pool.root.1
[2026-03-25 21:41:28] -rw-r--r-- 3 boincer umatlas 239479780 Mar 25 13:24 ATLAS.root_0
[2026-03-25 21:41:28] -rw-r--r-- 2 boincer umatlas     15845 Mar 25 13:24 start_atlas.sh
[2026-03-25 21:41:28] drwxrwx--x 2 boincer umatlas      4096 Mar 25 13:24 shared
[2026-03-25 21:41:28] -rw-r--r-- 2 boincer umatlas    597534 Mar 25 13:24 input.tar.gz
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas         0 Mar 25 13:24 boinc_lockfile
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas      2617 Mar 25 16:48 pandaJob.out
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas        57 Mar 25 16:48 setup.sh.local
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas   1012179 Mar 25 16:48 agis_schedconf.cvmfs.json
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas       431 Mar 25 16:48 workernode_map.json
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas      5912 Mar 25 21:38 init_data.xml
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas 221458064 Mar 25 21:40 HITS.49181022._000126.pool.root.1
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas       531 Mar 25 21:40 boinc_task_state.xml
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas        96 Mar 25 21:40 pilot_heartbeat.json
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas      1056 Mar 25 21:40 memory_monitor_summary.json
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas      8192 Mar 25 21:40 boinc_mmap_file
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas        29 Mar 25 21:40 wrapper_checkpoint.txt
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas   1511579 Mar 25 21:40 agis_ddmendpoints.agis.ALL.json
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas    491857 Mar 25 21:40 log.49181022._000126.job.log.tgz.1
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas      6404 Mar 25 21:41 heartbeat.json
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas      4548 Mar 25 21:41 pilotlog.txt
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas   2388823 Mar 25 21:41 log.49181022._000126.job.log.1
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas       357 Mar 25 21:41 output.list
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas       620 Mar 25 21:41 runtime_log
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas   2897920 Mar 25 21:41 result.tar.gz
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas      9427 Mar 25 21:41 runtime_log.err
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas       789 Mar 25 21:41 mM1MDm39fM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmF3wLDmKgkRGn.diag
[2026-03-25 21:41:28] -rw-r--r-- 1 boincer umatlas     23361 Mar 25 21:41 stderr.txt
[2026-03-25 21:41:28] HITS file was successfully produced:
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas 221458064 Mar 25 21:40 shared/HITS.pool.root.1
[2026-03-25 21:41:28]  *** Contents of shared directory: ***
[2026-03-25 21:41:28] total 453572
[2026-03-25 21:41:28] -rw-r--r-- 3 boincer umatlas 239479780 Mar 25 13:24 ATLAS.root_0
[2026-03-25 21:41:28] -rw-r--r-- 2 boincer umatlas     15845 Mar 25 13:24 start_atlas.sh
[2026-03-25 21:41:28] -rw-r--r-- 2 boincer umatlas    597534 Mar 25 13:24 input.tar.gz
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas 221458064 Mar 25 21:40 HITS.pool.root.1
[2026-03-25 21:41:28] -rw------- 1 boincer umatlas   2897920 Mar 25 21:41 result.tar.gz
21:41:29 (17112): run_atlas exited; CPU time 128112.346675
21:41:29 (17112): called boinc_finish(0)

</stderr_txt>
]]>

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