Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:50:45 (19859): wrapper (7.7.26015): starting
09:50:45 (19859): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 09:50:45] Arguments: --nthreads 8
[2026-03-26 09:50:45] Threads: 8
[2026-03-26 09:50:45] Checking for CVMFS
[2026-03-26 09:50:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 09:50:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 09:50:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 09:50:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 09:50:49] 2.11.2.0 20181 144640 140136 157713 0 53 21504550 25165825 4732 130560 156 39919847 99.824 32368360 1036 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-26 09:50:49] CVMFS is ok
[2026-03-26 09:50:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 09:50:49] Checking for apptainer binary...
[2026-03-26 09:50:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 09:50:49] Running /usr/bin/apptainer --version
[2026-03-26 09:50:49] apptainer version 1.3.2-1.el7
[2026-03-26 09:50:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 09:50:54] cg-vwn427.simple-grid.lan
[2026-03-26 09:50:54] apptainer works
[2026-03-26 09:50:54] Set ATHENA_PROC_NUMBER=8
[2026-03-26 09:50:54] Set ATHENA_CORE_NUMBER=8
[2026-03-26 09:50:54] Starting ATLAS job with PandaID=7057151951
[2026-03-26 09:50:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 20:02:43]  *** The last 200 lines of the pilot log: ***
[2026-03-26 20:02:43] 2026-03-26 19:01:37,962 | INFO     | mean y: 2492570.264957265
[2026-03-26 20:02:43] 2026-03-26 19:01:37,962 | INFO     | intersect: -13865347862.890879
[2026-03-26 20:02:43] 2026-03-26 19:01:37,963 | INFO     | chi2: 7.9464928501252885
[2026-03-26 20:02:43] 2026-03-26 19:01:37,963 | INFO     | current chi2=7.9464928501252885 (change=-0.033551966147824526 %)
[2026-03-26 20:02:43] 2026-03-26 19:01:37,963 | INFO     | right removable region: 584
[2026-03-26 20:02:43] 2026-03-26 19:01:37,964 | INFO     | sum of square deviations: 62079005820.0
[2026-03-26 20:02:43] 2026-03-26 19:01:37,978 | INFO     | sum of deviations: 270401948996.0
[2026-03-26 20:02:43] 2026-03-26 19:01:37,978 | INFO     | mean x: 1774533820.0
[2026-03-26 20:02:43] 2026-03-26 19:01:37,978 | INFO     | mean y: 2513931.5914529916
[2026-03-26 20:02:43] 2026-03-26 19:01:37,978 | INFO     | intersect: -7726949469.910505
[2026-03-26 20:02:43] 2026-03-26 19:01:37,979 | INFO     | chi2: 2.8218029426566558
[2026-03-26 20:02:43] 2026-03-26 19:01:37,980 | INFO     | current chi2=2.8218029426566558 (change=64.47804375762787 %)
[2026-03-26 20:02:43] 2026-03-26 19:01:37,980 | INFO     | sum of square deviations: 60500799485.0
[2026-03-26 20:02:43] 2026-03-26 19:01:37,990 | INFO     | sum of deviations: 109023922864.00002
[2026-03-26 20:02:43] 2026-03-26 19:01:37,991 | INFO     | mean x: 1774533972.5
[2026-03-26 20:02:43] 2026-03-26 19:01:37,991 | INFO     | mean y: 2529513.0655172416
[2026-03-26 20:02:43] 2026-03-26 19:01:37,991 | INFO     | intersect: -3195224179.1869926
[2026-03-26 20:02:43] 2026-03-26 19:01:37,992 | INFO     | chi2: 0.12720659264189746
[2026-03-26 20:02:43] 2026-03-26 19:01:37,992 | INFO     | current chi2=0.12720659264189746 (change=95.49201006495032 %)
[2026-03-26 20:02:43] 2026-03-26 19:01:37,993 | INFO     | sum of square deviations: 58949570400.0
[2026-03-26 20:02:43] 2026-03-26 19:01:38,003 | INFO     | sum of deviations: 81044602257.00012
[2026-03-26 20:02:43] 2026-03-26 19:01:38,008 | INFO     | mean x: 1774534125.0
[2026-03-26 20:02:43] 2026-03-26 19:01:38,008 | INFO     | mean y: 2532260.6173913046
[2026-03-26 20:02:43] 2026-03-26 19:01:38,008 | INFO     | intersect: -2437119315.742506
[2026-03-26 20:02:43] 2026-03-26 19:01:38,009 | INFO     | chi2: 0.036271944779926665
[2026-03-26 20:02:43] 2026-03-26 19:01:38,009 | INFO     | current chi2=0.036271944779926665 (change=71.48579800259508 %)
[2026-03-26 20:02:43] 2026-03-26 19:01:38,010 | INFO     | sum of square deviations: 57425086002.5
[2026-03-26 20:02:43] 2026-03-26 19:01:38,020 | INFO     | sum of deviations: 68315381202.000015
[2026-03-26 20:02:43] 2026-03-26 19:01:38,021 | INFO     | mean x: 1774534277.5
[2026-03-26 20:02:43] 2026-03-26 19:01:38,021 | INFO     | mean y: 2533529.635087719
[2026-03-26 20:02:43] 2026-03-26 19:01:38,021 | INFO     | intersect: -2108529666.9990542
[2026-03-26 20:02:43] 2026-03-26 19:01:38,022 | INFO     | chi2: 0.009304131697733992
[2026-03-26 20:02:43] 2026-03-26 19:01:38,022 | INFO     | current chi2=0.009304131697733992 (change=74.34895825358939 %)
[2026-03-26 20:02:43] 2026-03-26 19:01:38,023 | INFO     | sum of square deviations: 55927113730.0
[2026-03-26 20:02:43] 2026-03-26 19:01:38,032 | INFO     | sum of deviations: 63415290547.00001
[2026-03-26 20:02:43] 2026-03-26 19:01:38,033 | INFO     | mean x: 1774534430.0
[2026-03-26 20:02:43] 2026-03-26 19:01:38,033 | INFO     | mean y: 2534028.192920354
[2026-03-26 20:02:43] 2026-03-26 19:01:38,033 | INFO     | intersect: -2009595848.692558
[2026-03-26 20:02:43] 2026-03-26 19:01:38,034 | INFO     | chi2: 0.00820917340255182
[2026-03-26 20:02:43] 2026-03-26 19:01:38,034 | INFO     | current chi2=0.00820917340255182 (change=11.768516727346494 %)
[2026-03-26 20:02:43] 2026-03-26 19:01:38,034 | INFO     | left removable region: 50
[2026-03-26 20:02:43] 2026-03-26 19:01:38,035 | INFO     | sum of square deviations: 47217248097.5
[2026-03-26 20:02:43] 2026-03-26 19:01:38,044 | INFO     | sum of deviations: 53125219640.0
[2026-03-26 20:02:43] 2026-03-26 19:01:38,044 | INFO     | mean x: 1774535009.5
[2026-03-26 20:02:43] 2026-03-26 19:01:38,044 | INFO     | mean y: 2534800.329588015
[2026-03-26 20:02:43] 2026-03-26 19:01:38,044 | INFO     | intersect: -1994035646.636982
[2026-03-26 20:02:43] 2026-03-26 19:01:38,045 | INFO     | chi2: 0.007456960242780658
[2026-03-26 20:02:43] 2026-03-26 19:01:38,046 | INFO     | current memory leak: 1.13 B/s (using 534 data points, chi2=0.01)
[2026-03-26 20:02:43] 2026-03-26 19:01:38,047 | INFO     | could have reported an average CPU frequency of 1999 MHz (24 samples)
[2026-03-26 20:02:43] 2026-03-26 19:01:38,047 | INFO     | ..............................
[2026-03-26 20:02:43] 2026-03-26 19:01:38,047 | INFO     | . Timing measurements:
[2026-03-26 20:02:43] 2026-03-26 19:01:38,047 | INFO     | . get job = 0 s
[2026-03-26 20:02:43] 2026-03-26 19:01:38,047 | INFO     | . initial setup = 97 s
[2026-03-26 20:02:43] 2026-03-26 19:01:38,047 | INFO     | . payload setup = 167 s
[2026-03-26 20:02:43] 2026-03-26 19:01:38,047 | INFO     | . stage-in = 0 s
[2026-03-26 20:02:43] 2026-03-26 19:01:38,047 | INFO     | . payload execution = 36114 s
[2026-03-26 20:02:43] 2026-03-26 19:01:38,048 | INFO     | . stage-out = 1 s
[2026-03-26 20:02:43] 2026-03-26 19:01:38,048 | INFO     | . log creation = 0 s
[2026-03-26 20:02:43] 2026-03-26 19:01:38,048 | INFO     | ..............................
[2026-03-26 20:02:43] 2026-03-26 19:01:38,165 | INFO     | 
[2026-03-26 20:02:43] 2026-03-26 19:01:38,166 | INFO     | job summary report
[2026-03-26 20:02:43] 2026-03-26 19:01:38,166 | INFO     | --------------------------------------------------
[2026-03-26 20:02:43] 2026-03-26 19:01:38,166 | INFO     | PanDA job id: 7057151951
[2026-03-26 20:02:43] 2026-03-26 19:01:38,166 | INFO     | task id: 49177146
[2026-03-26 20:02:43] 2026-03-26 19:01:38,166 | INFO     | errors: (none)
[2026-03-26 20:02:43] 2026-03-26 19:01:38,166 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 20:02:43] 2026-03-26 19:01:38,166 | INFO     | pilot state: finished 
[2026-03-26 20:02:43] 2026-03-26 19:01:38,166 | INFO     | transexitcode: 0
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | exeerrorcode: 0
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | exeerrordiag: 
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | exitcode: 0
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | exitmsg: OK
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | cpuconsumptiontime: 141988 s
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | nevents: 400
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | neventsw: 0
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | pid: 28527
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | pgrp: 28527
[2026-03-26 20:02:43] 2026-03-26 19:01:38,167 | INFO     | corecount: 8
[2026-03-26 20:02:43] 2026-03-26 19:01:38,168 | INFO     | event service: False
[2026-03-26 20:02:43] 2026-03-26 19:01:38,168 | INFO     | sizes: {0: 2279891, 1: 2280352, 12: 2280352, 36285: 2320890, 36287: 2329890, 36288: 2329946, 36291: 2330268}
[2026-03-26 20:02:43] 2026-03-26 19:01:38,168 | INFO     | --------------------------------------------------
[2026-03-26 20:02:43] 2026-03-26 19:01:38,168 | INFO     | 
[2026-03-26 20:02:43] 2026-03-26 19:01:38,168 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-03-26 20:02:43] 2026-03-26 19:01:38,221 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,222 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,222 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,222 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,223 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,223 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,223 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,223 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,224 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 20:02:43] 2026-03-26 19:01:38,224 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,224 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 20:02:43] 2026-03-26 19:01:38,225 | INFO     | job 7057151951 has completed (purged errors)
[2026-03-26 20:02:43] 2026-03-26 19:01:38,225 | INFO     | overall cleanup function is called
[2026-03-26 20:02:43] 2026-03-26 19:01:38,910 | WARNING  | process 28527 can no longer be monitored (due to stat problems) - aborting
[2026-03-26 20:02:43] 2026-03-26 19:01:38,988 | INFO     | using path: /var/lib/boinc/slots/15/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 20:02:43] 2026-03-26 19:01:39,090 | INFO     | number of running child processes to parent process 28527: 1
[2026-03-26 20:02:43] 2026-03-26 19:01:39,090 | INFO     | maximum number of monitored processes: 8
[2026-03-26 20:02:43] 2026-03-26 19:01:39,090 | INFO     | aborting job monitoring since job object (job id=7057151951) has expired
[2026-03-26 20:02:43] 2026-03-26 19:01:39,234 | INFO     | --- collectZombieJob: --- 10, [28527]
[2026-03-26 20:02:43] 2026-03-26 19:01:39,235 | INFO     | zombie collector waiting for pid 28527
[2026-03-26 20:02:43] 2026-03-26 19:01:39,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 20:02:43] 2026-03-26 19:01:39,235 | INFO     | collected zombie processes
[2026-03-26 20:02:43] 2026-03-26 19:01:39,235 | INFO     | will attempt to kill all subprocesses of pid=28527
[2026-03-26 20:02:43] 2026-03-26 19:01:39,336 | INFO     | process IDs to be killed: [28527] (in reverse order)
[2026-03-26 20:02:43] 2026-03-26 19:01:39,401 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 20:02:43] 2026-03-26 19:01:39,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 20:02:43] 2026-03-26 19:01:39,405 | INFO     | did not find any defunct processes belonging to 28527
[2026-03-26 20:02:43] 2026-03-26 19:01:39,408 | INFO     | did not find any defunct processes belonging to 28527
[2026-03-26 20:02:43] 2026-03-26 19:01:39,409 | INFO     | ready for new job
[2026-03-26 20:02:43] 2026-03-26 19:01:39,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 20:02:43] 2026-03-26 19:01:39,412 | INFO     | **************************************
[2026-03-26 20:02:43] 2026-03-26 19:01:39,413 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 20:02:43] 2026-03-26 19:01:39,413 | INFO     | **************************************
[2026-03-26 20:02:43] 2026-03-26 19:01:39,413 | INFO     | 
[2026-03-26 20:02:43] 2026-03-26 19:01:39,413 | INFO     | pilot is running in a VM
[2026-03-26 20:02:43] 2026-03-26 19:01:39,414 | INFO     | architecture information:
[2026-03-26 20:02:43] 2026-03-26 19:01:39,414 | INFO     | executing command: cat /etc/os-release
[2026-03-26 20:02:43] 2026-03-26 19:01:39,439 | INFO     | cat /etc/os-release:
[2026-03-26 20:02:43] NAME="CentOS Linux"
[2026-03-26 20:02:43] VERSION="7 (Core)"
[2026-03-26 20:02:43] ID="centos"
[2026-03-26 20:02:43] ID_LIKE="rhel fedora"
[2026-03-26 20:02:43] VERSION_ID="7"
[2026-03-26 20:02:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 20:02:43] ANSI_COLOR="0;31"
[2026-03-26 20:02:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 20:02:43] HOME_URL="https://www.centos.org/"
[2026-03-26 20:02:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 20:02:43] 
[2026-03-26 20:02:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 20:02:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 20:02:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 20:02:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 20:02:43] 
[2026-03-26 20:02:43] 2026-03-26 19:01:39,439 | INFO     | **************************************
[2026-03-26 20:02:43] 2026-03-26 19:01:39,942 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-03-26 20:02:43] 2026-03-26 19:01:39,965 | INFO     | sufficient remaining disk space (496354983936 B)
[2026-03-26 20:02:43] 2026-03-26 19:01:39,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 20:02:43] 2026-03-26 19:01:39,965 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 20:02:43] 2026-03-26 19:01:39,966 | INFO     | update_server=False
[2026-03-26 20:02:43] 2026-03-26 19:01:39,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 20:02:43] 2026-03-26 19:01:39,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 20:02:43] 2026-03-26 19:01:39,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 20:02:43] 2026-03-26 19:01:39,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 20:02:43] 2026-03-26 19:01:39,968 | INFO     | will abort loop
[2026-03-26 20:02:43] 2026-03-26 19:01:39,992 | INFO     | all payload control threads have been joined
[2026-03-26 20:02:43] 2026-03-26 19:01:40,150 | INFO     | all job control threads have been joined
[2026-03-26 20:02:43] 2026-03-26 19:01:40,195 | INFO     | all data control threads have been joined
[2026-03-26 20:02:43] 2026-03-26 19:01:40,971 | INFO     | [job] retrieve thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:40,971 | INFO     | [job] queue monitor thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:40,973 | INFO     | [job] job monitor thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:40,994 | INFO     | [payload] control thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:41,155 | INFO     | [job] control thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:41,201 | INFO     | [data] control thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:41,366 | INFO     | [payload] validate_post thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:41,662 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:41,736 | INFO     | [payload] failed_post thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:41,973 | INFO     | [data] copytool_out thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:41,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 20:02:43] 2026-03-26 19:01:41,993 | INFO     | [data] copytool_in thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:42,017 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:42,150 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:42,252 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:42,345 | INFO     | [job] validate thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:01:45,996 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 20:02:43] 2026-03-26 19:02:09,999 | INFO     | PID=23975 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-26 20:02:43] 2026-03-26 19:02:09,999 | INFO     | .. there are 9 such processes running
[2026-03-26 20:02:43] 2026-03-26 19:02:10,001 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 20:02:43] 2026-03-26 19:02:10,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 20:02:43] 2026-03-26 19:02:10,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 20:02:43] 2026-03-26 19:02:37,140 | INFO     | [monitor] cgroup control has ended
[2026-03-26 20:02:43] 2026-03-26 19:02:38,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966640637760)>', '<ExcThread(monitor, started 139966046783232)>']
[2026-03-26 20:02:43] 2026-03-26 19:02:38,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 20:02:43] 2026-03-26 19:02:38,127 | INFO     | [monitor] control thread has ended
[2026-03-26 20:02:43] 2026-03-26 19:02:43,126 | INFO     | all workflow threads have been joined
[2026-03-26 20:02:43] 2026-03-26 19:02:43,126 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 20:02:43] 2026-03-26 19:02:43,126 | INFO     | traces error code: 0
[2026-03-26 20:02:43] 2026-03-26 19:02:43,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 20:02:43] 2026-03-26 19:02:43,309 [wrapper] ==== pilot stdout END ====
[2026-03-26 20:02:43] 2026-03-26 19:02:43,312 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 20:02:43] 2026-03-26 19:02:43,316 [wrapper] pilotpid: 23975
[2026-03-26 20:02:43] 2026-03-26 19:02:43,319 [wrapper] Pilot exit status: 0
[2026-03-26 20:02:43] 2026-03-26 19:02:43,341 [wrapper] pandaids: 7057151951
[2026-03-26 20:02:43] 2026-03-26 19:02:43,390 [wrapper] cleanup supervisor_pilot 25160 23976
[2026-03-26 20:02:43] 2026-03-26 19:02:43,406 [wrapper] Test setup, not cleaning
[2026-03-26 20:02:43] 2026-03-26 19:02:43,411 [wrapper] apfmon messages muted
[2026-03-26 20:02:43] 2026-03-26 19:02:43,414 [wrapper] ==== wrapper stdout END ====
[2026-03-26 20:02:43] 2026-03-26 19:02:43,417 [wrapper] ==== wrapper stderr END ====
[2026-03-26 20:02:43]  *** Error codes and diagnostics ***
[2026-03-26 20:02:43]     "exeErrorCode": 0,
[2026-03-26 20:02:43]     "exeErrorDiag": "",
[2026-03-26 20:02:43]     "pilotErrorCode": 0,
[2026-03-26 20:02:43]     "pilotErrorDiag": "",
[2026-03-26 20:02:43]  *** Listing of results directory ***
[2026-03-26 20:02:43] total 488544
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc    585013 Mar 17 10:43 pilot3.tar.gz
[2026-03-26 20:02:43] -rwx------. 1 boinc boinc     36322 Mar 17 10:44 runpilot2-wrapper.sh
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc      5111 Mar 17 10:44 queuedata.json
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc       100 Mar 26 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 20:02:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 26 09:50 run_atlas
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc       105 Mar 26 09:50 job.xml
[2026-03-26 20:02:43] -rw-r--r--. 2 boinc boinc 239363654 Mar 26 09:50 EVNT.49136646._000004.pool.root.1
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc      6391 Mar 26 09:50 init_data.xml
[2026-03-26 20:02:43] -rw-r--r--. 2 boinc boinc     15845 Mar 26 09:50 start_atlas.sh
[2026-03-26 20:02:43] drwxrwx--x. 2 boinc boinc        68 Mar 26 09:50 shared
[2026-03-26 20:02:43] -rw-r--r--. 2 boinc boinc    597531 Mar 26 09:50 input.tar.gz
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc         0 Mar 26 09:50 boinc_lockfile
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc      2628 Mar 26 09:50 pandaJob.out
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc       415 Mar 26 09:56 workernode_map.json
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc   1012192 Mar 26 09:56 agis_schedconf.cvmfs.json
[2026-03-26 20:02:43] drwx------. 5 boinc boinc      4096 Mar 26 09:56 pilot3
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc 245403253 Mar 26 20:00 HITS.49177146._000092.pool.root.1
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc       532 Mar 26 20:01 boinc_task_state.xml
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc      1019 Mar 26 20:01 memory_monitor_summary.json
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc   1511579 Mar 26 20:01 agis_ddmendpoints.agis.ALL.json
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc    772782 Mar 26 20:01 log.49177146._000092.job.log.tgz.1
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc      6315 Mar 26 20:01 heartbeat.json
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc        95 Mar 26 20:02 pilot_heartbeat.json
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc      8192 Mar 26 20:02 boinc_mmap_file
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc        29 Mar 26 20:02 wrapper_checkpoint.txt
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc      4883 Mar 26 20:02 pilotlog.txt
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc   5011608 Mar 26 20:02 log.49177146._000092.job.log.1
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc       357 Mar 26 20:02 output.list
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc       620 Mar 26 20:02 runtime_log
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc   5806080 Mar 26 20:02 result.tar.gz
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc      8832 Mar 26 20:02 runtime_log.err
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc       658 Mar 26 20:02 m1UMDmF9fM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmByzLDm3Qb9hm.diag
[2026-03-26 20:02:43] -rw-r--r--. 1 boinc boinc     20783 Mar 26 20:02 stderr.txt
[2026-03-26 20:02:43] HITS file was successfully produced:
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc 245403253 Mar 26 20:00 shared/HITS.pool.root.1
[2026-03-26 20:02:43]  *** Contents of shared directory: ***
[2026-03-26 20:02:43] total 479680
[2026-03-26 20:02:43] -rw-r--r--. 2 boinc boinc 239363654 Mar 26 09:50 ATLAS.root_0
[2026-03-26 20:02:43] -rw-r--r--. 2 boinc boinc     15845 Mar 26 09:50 start_atlas.sh
[2026-03-26 20:02:43] -rw-r--r--. 2 boinc boinc    597531 Mar 26 09:50 input.tar.gz
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc 245403253 Mar 26 20:00 HITS.pool.root.1
[2026-03-26 20:02:43] -rw-------. 1 boinc boinc   5806080 Mar 26 20:02 result.tar.gz
20:02:44 (19859): run_atlas exited; CPU time 142550.576302
20:02:44 (19859): called boinc_finish(0)

</stderr_txt>
]]>

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